HEADER HYDROLASE 19-JUN-07 2QCT
TITLE STRUCTURE OF LYP WITH INHIBITOR I-C11
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 22;
COMPND 3 CHAIN: A, B;
COMPND 4 FRAGMENT: CATALYTIC DOMAIN;
COMPND 5 SYNONYM: HEMATOPOIETIC CELL PROTEIN-TYROSINE PHOSPHATASE 70Z-PEP,
COMPND 6 LYMPHOID PHOSPHATASE, LYP;
COMPND 7 EC: 3.1.3.48;
COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: PTPN22, PTPN8;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A
KEYWDS PTPN22, LYP, PTP, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR X.YU,J.P.SUN,Z.Y.ZHANG
REVDAT 3 30-AUG-23 2QCT 1 REMARK SEQADV
REVDAT 2 24-FEB-09 2QCT 1 VERSN
REVDAT 1 20-NOV-07 2QCT 0
JRNL AUTH X.YU,J.P.SUN,Y.T.HE,B.ZHOU,S.J.LIU,Z.Y.ZHANG
JRNL TITL CRYSTAL STRUCTURE OF LYP AND ITS COMPLEX WITH A SELECTIVE
JRNL TITL 2 INHIBITOR
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 2.80 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-
REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,
REMARK 3 : READ,RICE,SIMONSON,WARREN
REMARK 3
REMARK 3 REFINEMENT TARGET : ENGH & HUBER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.6
REMARK 3 NUMBER OF REFLECTIONS : 13879
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING SET) : 0.245
REMARK 3 FREE R VALUE : 0.275
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : 1112
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL
REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : NULL
REMARK 3 BIN FREE R VALUE : NULL
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 4600
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 42
REMARK 3 SOLVENT ATOMS : 24
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM SIGMAA (A) : NULL
REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM C-V SIGMAA (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : NULL
REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL
REMARK 3 IMPROPER ANGLES (DEGREES) : 0.948
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED : NULL
REMARK 3 KSOL : NULL
REMARK 3 BSOL : NULL
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 2QCT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUN-07.
REMARK 100 THE DEPOSITION ID IS D_1000043436.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 20-DEC-06
REMARK 200 TEMPERATURE (KELVIN) : 200
REMARK 200 PH : 7.2
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : L
REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418
REMARK 200 MONOCHROMATOR : GRAPHITE
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13879
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6
REMARK 200 DATA REDUNDANCY : 3.400
REMARK 200 R MERGE (I) : 0.06900
REMARK 200 R SYM (I) : 0.09100
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.5000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90
REMARK 200 COMPLETENESS FOR SHELL (%) : 86.8
REMARK 200 DATA REDUNDANCY IN SHELL : 2.80
REMARK 200 R MERGE FOR SHELL (I) : 0.34400
REMARK 200 R SYM FOR SHELL (I) : 0.39000
REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: LAUE
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: CNS
REMARK 200 STARTING MODEL: PDB ENTRY 2QCJ
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 40.41
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM FORMATE, 20% PEG3350, 2.5%
REMARK 280 ETHYL GLYCEROL, PH 7.2, EVAPORATION, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 73.97250
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 HIS A -18
REMARK 465 HIS A -17
REMARK 465 HIS A -16
REMARK 465 HIS A -15
REMARK 465 HIS A -14
REMARK 465 HIS A -13
REMARK 465 SER A -12
REMARK 465 SER A -11
REMARK 465 GLY A -10
REMARK 465 LEU A -9
REMARK 465 VAL A -8
REMARK 465 PRO A -7
REMARK 465 ARG A -6
REMARK 465 GLY A -5
REMARK 465 SER A -4
REMARK 465 HIS A -3
REMARK 465 MET A -2
REMARK 465 ALA A -1
REMARK 465 SER A 0
REMARK 465 MET A 1
REMARK 465 ASP A 2
REMARK 465 GLU A 13
REMARK 465 ALA A 14
REMARK 465 GLN A 15
REMARK 465 SER A 16
REMARK 465 LYS A 17
REMARK 465 LYS A 18
REMARK 465 ILE A 19
REMARK 465 THR A 20
REMARK 465 LYS A 21
REMARK 465 GLU A 22
REMARK 465 HIS B -18
REMARK 465 HIS B -17
REMARK 465 HIS B -16
REMARK 465 HIS B -15
REMARK 465 HIS B -14
REMARK 465 HIS B -13
REMARK 465 SER B -12
REMARK 465 SER B -11
REMARK 465 GLY B -10
REMARK 465 LEU B -9
REMARK 465 VAL B -8
REMARK 465 PRO B -7
REMARK 465 ARG B -6
REMARK 465 GLY B -5
REMARK 465 SER B -4
REMARK 465 HIS B -3
REMARK 465 MET B -2
REMARK 465 ALA B -1
REMARK 465 SER B 0
REMARK 465 MET B 1
REMARK 465 LYS B 18
REMARK 465 ILE B 19
REMARK 465 THR B 20
REMARK 465 SER B 35
REMARK 465 THR B 36
REMARK 465 LYS B 37
REMARK 465 TYR B 38
REMARK 465 LYS B 39
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LEU A 7 CG CD1 CD2
REMARK 470 GLN A 8 CG CD OE1 NE2
REMARK 470 GLU A 23 CG CD OE1 OE2
REMARK 470 LYS A 32 CG CD CE NZ
REMARK 470 LYS A 42 CG CD CE NZ
REMARK 470 LYS A 53 CG CD CE NZ
REMARK 470 LYS A 61 CG CD CE NZ
REMARK 470 HIS A 196 CG ND1 CD2 CE1 NE2
REMARK 470 VAL A 198 CG1 CG2
REMARK 470 ASP A 218 CG OD1 OD2
REMARK 470 ARG B 4 CG CD NE CZ NH1 NH2
REMARK 470 LEU B 7 CG CD1 CD2
REMARK 470 GLN B 15 CG CD OE1 NE2
REMARK 470 SER B 16 OG
REMARK 470 LYS B 21 CG CD CE NZ
REMARK 470 GLU B 22 CG CD OE1 OE2
REMARK 470 GLU B 23 CG CD OE1 OE2
REMARK 470 LYS B 32 CG CD CE NZ
REMARK 470 GLN B 34 CG CD OE1 NE2
REMARK 470 ASP B 41 CG OD1 OD2
REMARK 470 LYS B 42 CG CD CE NZ
REMARK 470 THR B 43 OG1 CG2
REMARK 470 LYS B 61 CG CD CE NZ
REMARK 470 ASP B 197 CG OD1 OD2
REMARK 470 GLU B 217 CG CD OE1 OE2
REMARK 470 GLN B 293 CG CD OE1 NE2
REMARK 480
REMARK 480 ZERO OCCUPANCY ATOM
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 480 M RES C SSEQI ATOMS
REMARK 480 MET A 294 OXT
REMARK 480 MET B 294 OXT
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ARG A 4 85.30 -165.42
REMARK 500 GLU A 5 99.17 -65.87
REMARK 500 LEU A 7 39.61 -147.17
REMARK 500 GLN A 8 77.62 -23.97
REMARK 500 ARG A 33 -165.38 -66.52
REMARK 500 GLN A 34 -72.31 68.70
REMARK 500 SER A 35 4.02 -67.52
REMARK 500 LEU A 75 108.28 -59.39
REMARK 500 ALA A 128 44.62 -98.95
REMARK 500 PHE A 153 75.93 -119.49
REMARK 500 GLU A 163 113.49 -162.18
REMARK 500 PHE A 178 -73.54 -77.95
REMARK 500 ASN A 179 -106.43 -97.02
REMARK 500 LYS A 191 -84.50 -63.79
REMARK 500 ASP A 195 -169.68 -59.55
REMARK 500 HIS A 196 -81.15 -77.14
REMARK 500 ASP A 197 18.39 -56.13
REMARK 500 VAL A 198 68.71 -116.07
REMARK 500 PRO A 199 -5.96 -43.01
REMARK 500 ASP A 203 -56.94 -25.40
REMARK 500 GLU A 217 -93.73 -129.85
REMARK 500 CYS A 227 -127.26 -116.52
REMARK 500 SER A 228 -67.58 -94.69
REMARK 500 CYS A 231 -30.52 -132.14
REMARK 500 ILE A 251 5.54 -68.88
REMARK 500 PHE A 256 153.89 -41.16
REMARK 500 ARG A 292 -141.33 -76.93
REMARK 500 GLN A 293 -100.50 52.42
REMARK 500 ARG B 4 -96.50 -69.36
REMARK 500 GLU B 5 26.19 -75.70
REMARK 500 ILE B 6 -0.98 87.40
REMARK 500 GLN B 8 66.78 -53.60
REMARK 500 GLU B 22 6.65 -150.74
REMARK 500 ALA B 25 -70.54 -65.62
REMARK 500 LYS B 32 -10.13 -49.00
REMARK 500 ARG B 33 -109.07 -98.66
REMARK 500 LYS B 53 23.83 -68.15
REMARK 500 LYS B 61 -47.95 -29.94
REMARK 500 SER B 78 -175.57 -173.00
REMARK 500 SER B 83 31.75 -97.60
REMARK 500 ASN B 86 86.40 -69.55
REMARK 500 CYS B 129 131.98 167.89
REMARK 500 GLU B 163 119.59 -165.22
REMARK 500 LYS B 166 -155.97 -79.75
REMARK 500 SER B 167 -83.14 -62.51
REMARK 500 ASN B 179 -93.58 59.07
REMARK 500 SER B 180 4.68 -150.24
REMARK 500 LYS B 191 63.46 -69.36
REMARK 500 ASN B 192 84.28 169.32
REMARK 500 PRO B 194 124.84 -26.03
REMARK 500
REMARK 500 THIS ENTRY HAS 62 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 561 A 295
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 2QCJ RELATED DB: PDB
REMARK 900 NATIVE LYP CRYSTAL STRUCTURE
DBREF 2QCT A 1 294 UNP Q9Y2R2 PTN22_HUMAN 1 294
DBREF 2QCT B 1 294 UNP Q9Y2R2 PTN22_HUMAN 1 294
SEQADV 2QCT HIS A -18 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS A -17 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS A -16 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS A -15 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS A -14 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS A -13 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT SER A -12 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT SER A -11 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT GLY A -10 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT LEU A -9 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT VAL A -8 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT PRO A -7 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT ARG A -6 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT GLY A -5 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT SER A -4 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS A -3 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT MET A -2 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT ALA A -1 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT SER A 0 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS B -18 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS B -17 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS B -16 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS B -15 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS B -14 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS B -13 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT SER B -12 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT SER B -11 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT GLY B -10 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT LEU B -9 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT VAL B -8 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT PRO B -7 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT ARG B -6 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT GLY B -5 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT SER B -4 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT HIS B -3 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT MET B -2 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT ALA B -1 UNP Q9Y2R2 EXPRESSION TAG
SEQADV 2QCT SER B 0 UNP Q9Y2R2 EXPRESSION TAG
SEQRES 1 A 313 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG
SEQRES 2 A 313 GLY SER HIS MET ALA SER MET ASP GLN ARG GLU ILE LEU
SEQRES 3 A 313 GLN LYS PHE LEU ASP GLU ALA GLN SER LYS LYS ILE THR
SEQRES 4 A 313 LYS GLU GLU PHE ALA ASN GLU PHE LEU LYS LEU LYS ARG
SEQRES 5 A 313 GLN SER THR LYS TYR LYS ALA ASP LYS THR TYR PRO THR
SEQRES 6 A 313 THR VAL ALA GLU LYS PRO LYS ASN ILE LYS LYS ASN ARG
SEQRES 7 A 313 TYR LYS ASP ILE LEU PRO TYR ASP TYR SER ARG VAL GLU
SEQRES 8 A 313 LEU SER LEU ILE THR SER ASP GLU ASP SER SER TYR ILE
SEQRES 9 A 313 ASN ALA ASN PHE ILE LYS GLY VAL TYR GLY PRO LYS ALA
SEQRES 10 A 313 TYR ILE ALA THR GLN GLY PRO LEU SER THR THR LEU LEU
SEQRES 11 A 313 ASP PHE TRP ARG MET ILE TRP GLU TYR SER VAL LEU ILE
SEQRES 12 A 313 ILE VAL MET ALA CYS MET GLU TYR GLU MET GLY LYS LYS
SEQRES 13 A 313 LYS CYS GLU ARG TYR TRP ALA GLU PRO GLY GLU MET GLN
SEQRES 14 A 313 LEU GLU PHE GLY PRO PHE SER VAL SER CYS GLU ALA GLU
SEQRES 15 A 313 LYS ARG LYS SER ASP TYR ILE ILE ARG THR LEU LYS VAL
SEQRES 16 A 313 LYS PHE ASN SER GLU THR ARG THR ILE TYR GLN PHE HIS
SEQRES 17 A 313 TYR LYS ASN TRP PRO ASP HIS ASP VAL PRO SER SER ILE
SEQRES 18 A 313 ASP PRO ILE LEU GLU LEU ILE TRP ASP VAL ARG CYS TYR
SEQRES 19 A 313 GLN GLU ASP ASP SER VAL PRO ILE CYS ILE HIS CYS SER
SEQRES 20 A 313 ALA GLY CYS GLY ARG THR GLY VAL ILE CYS ALA ILE ASP
SEQRES 21 A 313 TYR THR TRP MET LEU LEU LYS ASP GLY ILE ILE PRO GLU
SEQRES 22 A 313 ASN PHE SER VAL PHE SER LEU ILE ARG GLU MET ARG THR
SEQRES 23 A 313 GLN ARG PRO SER LEU VAL GLN THR GLN GLU GLN TYR GLU
SEQRES 24 A 313 LEU VAL TYR ASN ALA VAL LEU GLU LEU PHE LYS ARG GLN
SEQRES 25 A 313 MET
SEQRES 1 B 313 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG
SEQRES 2 B 313 GLY SER HIS MET ALA SER MET ASP GLN ARG GLU ILE LEU
SEQRES 3 B 313 GLN LYS PHE LEU ASP GLU ALA GLN SER LYS LYS ILE THR
SEQRES 4 B 313 LYS GLU GLU PHE ALA ASN GLU PHE LEU LYS LEU LYS ARG
SEQRES 5 B 313 GLN SER THR LYS TYR LYS ALA ASP LYS THR TYR PRO THR
SEQRES 6 B 313 THR VAL ALA GLU LYS PRO LYS ASN ILE LYS LYS ASN ARG
SEQRES 7 B 313 TYR LYS ASP ILE LEU PRO TYR ASP TYR SER ARG VAL GLU
SEQRES 8 B 313 LEU SER LEU ILE THR SER ASP GLU ASP SER SER TYR ILE
SEQRES 9 B 313 ASN ALA ASN PHE ILE LYS GLY VAL TYR GLY PRO LYS ALA
SEQRES 10 B 313 TYR ILE ALA THR GLN GLY PRO LEU SER THR THR LEU LEU
SEQRES 11 B 313 ASP PHE TRP ARG MET ILE TRP GLU TYR SER VAL LEU ILE
SEQRES 12 B 313 ILE VAL MET ALA CYS MET GLU TYR GLU MET GLY LYS LYS
SEQRES 13 B 313 LYS CYS GLU ARG TYR TRP ALA GLU PRO GLY GLU MET GLN
SEQRES 14 B 313 LEU GLU PHE GLY PRO PHE SER VAL SER CYS GLU ALA GLU
SEQRES 15 B 313 LYS ARG LYS SER ASP TYR ILE ILE ARG THR LEU LYS VAL
SEQRES 16 B 313 LYS PHE ASN SER GLU THR ARG THR ILE TYR GLN PHE HIS
SEQRES 17 B 313 TYR LYS ASN TRP PRO ASP HIS ASP VAL PRO SER SER ILE
SEQRES 18 B 313 ASP PRO ILE LEU GLU LEU ILE TRP ASP VAL ARG CYS TYR
SEQRES 19 B 313 GLN GLU ASP ASP SER VAL PRO ILE CYS ILE HIS CYS SER
SEQRES 20 B 313 ALA GLY CYS GLY ARG THR GLY VAL ILE CYS ALA ILE ASP
SEQRES 21 B 313 TYR THR TRP MET LEU LEU LYS ASP GLY ILE ILE PRO GLU
SEQRES 22 B 313 ASN PHE SER VAL PHE SER LEU ILE ARG GLU MET ARG THR
SEQRES 23 B 313 GLN ARG PRO SER LEU VAL GLN THR GLN GLU GLN TYR GLU
SEQRES 24 B 313 LEU VAL TYR ASN ALA VAL LEU GLU LEU PHE LYS ARG GLN
SEQRES 25 B 313 MET
HET 561 A 295 34
HET EDO A 301 4
HET EDO B 302 4
HETNAM 561 6-HYDROXY-3-{(4R)-1-[4-(1-NAPHTHYLAMINO)-4-OXOBUTYL]-1,
HETNAM 2 561 2,3-TRIAZOLIDIN-4-YL}-1-BENZOFURAN-5-CARBOXYLIC ACID
HETNAM EDO 1,2-ETHANEDIOL
HETSYN EDO ETHYLENE GLYCOL
FORMUL 3 561 C25 H24 N4 O5
FORMUL 4 EDO 2(C2 H6 O2)
FORMUL 6 HOH *24(H2 O)
HELIX 1 1 GLU A 23 ARG A 33 1 11
HELIX 2 2 THR A 36 ASP A 41 1 6
HELIX 3 3 LYS A 51 ILE A 55 5 5
HELIX 4 4 THR A 109 TYR A 120 1 12
HELIX 5 5 ILE A 202 GLN A 216 1 15
HELIX 6 6 CYS A 231 LYS A 248 1 18
HELIX 7 7 SER A 257 ARG A 269 1 13
HELIX 8 8 THR A 275 ARG A 292 1 18
HELIX 9 9 GLU B 22 LYS B 32 1 11
HELIX 10 10 THR B 46 LYS B 51 1 6
HELIX 11 11 PRO B 52 ASN B 58 5 7
HELIX 12 12 THR B 109 SER B 121 1 13
HELIX 13 13 ASP B 203 GLN B 216 1 14
HELIX 14 14 CYS B 231 ASP B 249 1 19
HELIX 15 15 SER B 257 ARG B 269 1 13
HELIX 16 16 THR B 275 GLN B 293 1 19
SHEET 1 A 8 ALA A 87 ILE A 90 0
SHEET 2 A 8 TYR A 99 THR A 102 -1 O TYR A 99 N ILE A 90
SHEET 3 A 8 ILE A 223 HIS A 226 1 O ILE A 225 N ILE A 100
SHEET 4 A 8 ILE A 124 MET A 127 1 N VAL A 126 O CYS A 224
SHEET 5 A 8 THR A 182 HIS A 189 1 O PHE A 188 N ILE A 125
SHEET 6 A 8 ILE A 170 LYS A 177 -1 N ARG A 172 O GLN A 187
SHEET 7 A 8 PHE A 156 ARG A 165 -1 N LYS A 164 O ILE A 171
SHEET 8 A 8 LEU A 151 PHE A 153 -1 N PHE A 153 O PHE A 156
SHEET 1 B 8 ALA B 87 ILE B 90 0
SHEET 2 B 8 TYR B 99 THR B 102 -1 O TYR B 99 N ILE B 90
SHEET 3 B 8 ILE B 223 HIS B 226 1 O ILE B 223 N ILE B 100
SHEET 4 B 8 ILE B 124 MET B 127 1 N VAL B 126 O CYS B 224
SHEET 5 B 8 GLU B 181 HIS B 189 1 O PHE B 188 N MET B 127
SHEET 6 B 8 ILE B 170 PHE B 178 -1 N ARG B 172 O GLN B 187
SHEET 7 B 8 PHE B 156 ARG B 165 -1 N LYS B 164 O ILE B 171
SHEET 8 B 8 LEU B 151 PHE B 153 -1 N PHE B 153 O PHE B 156
SHEET 1 C 2 TYR B 132 GLU B 133 0
SHEET 2 C 2 LYS B 136 LYS B 137 -1 O LYS B 136 N GLU B 133
SITE 1 AC1 6 LYS A 32 GLU A 133 LYS A 138 SER A 228
SITE 2 AC1 6 ALA A 229 GLN A 274
CRYST1 44.904 147.945 46.157 90.00 98.04 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.022270 0.000000 0.003146 0.00000
SCALE2 0.000000 0.006759 0.000000 0.00000
SCALE3 0.000000 0.000000 0.021880 0.00000