HEADER VIRAL PROTEIN/INHIBITOR 03-JUL-07 2QID OBSLTE 09-FEB-10 2QID TITLE DENGUE VIRUS NS3-PROTEASE COMPLEXED WITH MUNG-BEAN BOWMAN-BIRK TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 1 (NS1); COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: NS3 PROTEASE DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BOWMAN-BIRK TYPE TRYPSIN INHIBITOR; COMPND 8 CHAIN: C; COMPND 9 FRAGMENT: MBBBI SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DENGUE VIRUS; SOURCE 3 ORGANISM_TAXID: 12637; SOURCE 4 STRAIN: JAMAICA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE MRF; SOURCE 8 OTHER_DETAILS: SEROTYPE 2; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: VIGNA RADIATA VAR. RADIATA; SOURCE 11 ORGANISM_COMMON: MUNG BEAN; SOURCE 12 ORGANISM_TAXID: 3916; SOURCE 13 STRAIN: VAR. RADIATA; SOURCE 14 OTHER_DETAILS: SEEDS KEYWDS BETA BARRELS, CATALYTIC TRIAD, INHIBITOR COMPLEX, MULTIPLE KEYWDS 2 CONFORMATION, VIRUS/VIRAL PROTEIN/INHIBITOR, VIRAL PROTEIN-INHIBITOR KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.H.M.MURTHY,K.JUDGE,L.DELUCAS,R.PADMANABHAN REVDAT 5 25-APR-12 2QID 1 REMARK REVDAT 4 09-FEB-10 2QID 1 OBSLTE REVDAT 3 24-FEB-09 2QID 1 VERSN REVDAT 2 28-AUG-07 2QID 1 REMARK SEQADV REVDAT 1 21-AUG-07 2QID 0 JRNL AUTH K.H.M.MURTHY,K.JUDGE,L.DELUCAS,R.PADMANABHAN JRNL TITL RETRACTED: CRYSTAL STRUCTURE OF DENGUE VIRUS NS3 PROTEASE IN JRNL TITL 2 COMPLEX WITH A BOWMAN-BIRK INHIBITOR: IMPLICATIONS FOR JRNL TITL 3 FLAVIVIRAL POLYPROTEIN PROCESSING AND DRUG DESIGN. JRNL REF J.MOL.BIOL. V. 301 759 2000 JRNL REFN ISSN 0022-2836 JRNL PMID 10966782 JRNL DOI 10.1006/JMBI.2000.3924 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.500 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 41212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : CHOSEN AT RANDOM THROUGOUT REMARK 3 RESOLUTION RANGE. REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4121 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3210 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 176 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.018 REMARK 3 BOND ANGLES (DEGREES) : 1.70 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USED SLOW COOLING, SIMULATED ANNEALING REMARK 3 PROCEDURE REMARK 4 REMARK 4 2QID COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 5 REMARK 5 THE ENTRY IS OBSOLETED DUE TO PAPER RETRACTION REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUL-07. REMARK 100 THE RCSB ID CODE IS RCSB043636. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-98 REMARK 200 TEMPERATURE (KELVIN) : 120.0 REMARK 200 PH : 7.80 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.52974 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XGEN REMARK 200 DATA SCALING SOFTWARE : XGEN REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41212 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.5 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.15600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, NACL, LICL, NICL2, BETA REMARK 280 OCTYL GLUCOSIDE, PH 7.80 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.75500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.39500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.07500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.39500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.75500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.07500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONSISTS OF AN INHIBITOR BRIDGED REMARK 300 PROTEASE DIMER, RELATED BY A NON-CRYSTALLOGRAPHIC REMARK 300 TWO FOLD SCREW AXIS. COORDINATES FOR BOTH ARE GIVEN REMARK 300 AS THERE ARE SIGNIFICANT DEPARTURES FROM EXACT SYMMETRY. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 ALA A 1 REMARK 465 GLY A 2 REMARK 465 VAL A 3 REMARK 465 LEU A 4 REMARK 465 ILE A 182 REMARK 465 PHE A 183 REMARK 465 ARG A 184 REMARK 465 LYS A 185 REMARK 465 HIS B 295 REMARK 465 HIS B 296 REMARK 465 HIS B 297 REMARK 465 HIS B 298 REMARK 465 HIS B 299 REMARK 465 HIS B 300 REMARK 465 ALA B 301 REMARK 465 GLY B 302 REMARK 465 VAL B 303 REMARK 465 LEU B 304 REMARK 465 ILE B 482 REMARK 465 PHE B 483 REMARK 465 ARG B 484 REMARK 465 LYS B 485 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP C 572 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N TRP A 50 OD2 ASP A 75 1.42 REMARK 500 C MET A 49 OD2 ASP A 75 1.91 REMARK 500 OG SER A 135 C LYS C 520 1.92 REMARK 500 CA MET A 49 OD2 ASP A 75 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS C 520 C LYS C 520 O 0.166 REMARK 500 ARG C 547 C ARG C 547 O 0.202 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 432 C - N - CA ANGL. DEV. = 16.3 DEGREES REMARK 500 PRO B 432 C - N - CD ANGL. DEV. = -21.0 DEGREES REMARK 500 ARG C 547 O - C - N ANGL. DEV. = -12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 26 75.84 37.68 REMARK 500 GLN A 27 -158.83 -159.90 REMARK 500 LYS A 28 93.65 67.66 REMARK 500 TYR A 33 22.95 -74.78 REMARK 500 SER A 34 -43.84 172.54 REMARK 500 ALA A 56 107.78 -59.28 REMARK 500 PRO A 106 -170.98 -59.06 REMARK 500 GLN A 110 77.59 49.55 REMARK 500 ARG A 157 -22.60 70.38 REMARK 500 ASP A 174 -62.29 -93.54 REMARK 500 PRO A 176 86.98 -63.91 REMARK 500 LYS B 326 76.17 37.68 REMARK 500 GLN B 327 -158.85 -160.20 REMARK 500 LYS B 328 93.04 67.71 REMARK 500 TYR B 333 36.73 -78.74 REMARK 500 SER B 334 -37.69 155.28 REMARK 500 ARG B 354 54.30 31.75 REMARK 500 PRO B 406 -171.15 -59.21 REMARK 500 GLN B 410 77.52 49.40 REMARK 500 ASP B 429 107.29 162.62 REMARK 500 PHE B 430 41.03 -86.54 REMARK 500 SER B 431 162.29 59.86 REMARK 500 ARG B 457 -22.28 70.28 REMARK 500 ASP B 474 -62.23 -93.41 REMARK 500 PRO B 476 86.85 -63.77 REMARK 500 LYS C 520 32.09 -75.77 REMARK 500 CYS C 528 -145.03 -130.69 REMARK 500 ALA C 529 -151.82 -132.52 REMARK 500 LEU C 533 59.94 -13.29 REMARK 500 ASN C 534 -80.99 -148.44 REMARK 500 ARG C 547 38.94 -57.19 REMARK 500 SER C 568 -52.19 174.74 REMARK 500 MET C 569 -44.45 109.23 REMARK 500 ASP C 570 -131.22 -149.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS C 520 -19.10 REMARK 500 ARG C 547 17.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ARG C 547 23.6 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1BEF RELATED DB: PDB DBREF 2QID A 1 185 UNP P14340 POLG_DEN2N 1476 1660 DBREF 2QID B 301 485 UNP P14340 POLG_DEN2N 1476 1660 DBREF 2QID C 501 572 UNP P01062 IBB_PHAAU 1 72 SEQADV 2QID HIS A -5 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS A -4 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS A -3 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS A -2 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS A -1 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS A 0 UNP P14340 EXPRESSION TAG SEQADV 2QID VAL A 77 UNP P14340 ILE 1552 CONFLICT SEQADV 2QID CYS A 79 UNP P14340 TYR 1554 CONFLICT SEQADV 2QID ILE A 149 UNP P14340 LEU 1624 CONFLICT SEQADV 2QID HIS B 295 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS B 296 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS B 297 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS B 298 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS B 299 UNP P14340 EXPRESSION TAG SEQADV 2QID HIS B 300 UNP P14340 EXPRESSION TAG SEQADV 2QID VAL B 377 UNP P14340 ILE 1552 CONFLICT SEQADV 2QID CYS B 379 UNP P14340 TYR 1554 CONFLICT SEQADV 2QID ILE B 449 UNP P14340 LEU 1624 CONFLICT SEQADV 2QID GLN C 525 UNP P01062 GLU 25 CONFLICT SEQRES 1 A 191 HIS HIS HIS HIS HIS HIS ALA GLY VAL LEU TRP ASP VAL SEQRES 2 A 191 PRO SER PRO PRO PRO VAL GLY LYS ALA GLU LEU GLU ASP SEQRES 3 A 191 GLY ALA TYR ARG ILE LYS GLN LYS GLY ILE LEU GLY TYR SEQRES 4 A 191 SER GLN ILE GLY ALA GLY VAL TYR LYS GLU GLY THR PHE SEQRES 5 A 191 HIS THR MET TRP HIS VAL THR ARG GLY ALA VAL LEU MET SEQRES 6 A 191 HIS LYS GLY LYS ARG ILE GLU PRO SER TRP ALA ASP VAL SEQRES 7 A 191 LYS LYS ASP LEU VAL SER CYS GLY GLY GLY TRP LYS LEU SEQRES 8 A 191 GLU GLY GLU TRP LYS GLU GLY GLU GLU VAL GLN VAL LEU SEQRES 9 A 191 ALA LEU GLU PRO GLY LYS ASN PRO ARG ALA VAL GLN THR SEQRES 10 A 191 LYS PRO GLY LEU PHE LYS THR ASN ALA GLY THR ILE GLY SEQRES 11 A 191 ALA VAL SER LEU ASP PHE SER PRO GLY THR SER GLY SER SEQRES 12 A 191 PRO ILE ILE ASP LYS LYS GLY LYS VAL VAL GLY ILE TYR SEQRES 13 A 191 GLY ASN GLY VAL VAL THR ARG SER GLY ALA TYR VAL SER SEQRES 14 A 191 ALA ILE ALA GLN THR GLU LYS SER ILE GLU ASP ASN PRO SEQRES 15 A 191 GLU ILE GLU ASP ASP ILE PHE ARG LYS SEQRES 1 B 191 HIS HIS HIS HIS HIS HIS ALA GLY VAL LEU TRP ASP VAL SEQRES 2 B 191 PRO SER PRO PRO PRO VAL GLY LYS ALA GLU LEU GLU ASP SEQRES 3 B 191 GLY ALA TYR ARG ILE LYS GLN LYS GLY ILE LEU GLY TYR SEQRES 4 B 191 SER GLN ILE GLY ALA GLY VAL TYR LYS GLU GLY THR PHE SEQRES 5 B 191 HIS THR MET TRP HIS VAL THR ARG GLY ALA VAL LEU MET SEQRES 6 B 191 HIS LYS GLY LYS ARG ILE GLU PRO SER TRP ALA ASP VAL SEQRES 7 B 191 LYS LYS ASP LEU VAL SER CYS GLY GLY GLY TRP LYS LEU SEQRES 8 B 191 GLU GLY GLU TRP LYS GLU GLY GLU GLU VAL GLN VAL LEU SEQRES 9 B 191 ALA LEU GLU PRO GLY LYS ASN PRO ARG ALA VAL GLN THR SEQRES 10 B 191 LYS PRO GLY LEU PHE LYS THR ASN ALA GLY THR ILE GLY SEQRES 11 B 191 ALA VAL SER LEU ASP PHE SER PRO GLY THR SER GLY SER SEQRES 12 B 191 PRO ILE ILE ASP LYS LYS GLY LYS VAL VAL GLY ILE TYR SEQRES 13 B 191 GLY ASN GLY VAL VAL THR ARG SER GLY ALA TYR VAL SER SEQRES 14 B 191 ALA ILE ALA GLN THR GLU LYS SER ILE GLU ASP ASN PRO SEQRES 15 B 191 GLU ILE GLU ASP ASP ILE PHE ARG LYS SEQRES 1 C 72 SER HIS ASP GLU PRO SER GLU SER SER GLU PRO CYS CYS SEQRES 2 C 72 ASP SER CYS ASP CYS THR LYS SER ILE PRO PRO GLN CYS SEQRES 3 C 72 HIS CYS ALA ASN ILE ARG LEU ASN SER CYS HIS SER ALA SEQRES 4 C 72 CYS LYS SER CYS ILE CYS THR ARG SER MET PRO GLY LYS SEQRES 5 C 72 CYS ARG CYS LEU ASP THR ASP ASP PHE CYS TYR LYS PRO SEQRES 6 C 72 CYS GLU SER MET ASP LYS ASP FORMUL 4 HOH *176(H2 O) HELIX 1 1 SER A 9 GLU A 17 1 9 HELIX 2 2 MET A 49 ARG A 54 1 6 HELIX 3 3 THR A 168 ILE A 172 1 5 HELIX 4 4 SER B 309 GLU B 317 1 9 HELIX 5 5 THR B 468 ILE B 472 1 5 SHEET 1 A 2 VAL A 40 LYS A 42 0 SHEET 2 A 2 THR A 45 HIS A 47 -1 O HIS A 47 N VAL A 40 SHEET 1 B 4 VAL A 95 VAL A 97 0 SHEET 2 B 4 PRO A 138 ASP A 141 -1 O ILE A 140 N GLN A 96 SHEET 3 B 4 VAL A 146 VAL A 154 -1 O VAL A 147 N ILE A 139 SHEET 4 B 4 VAL A 162 GLN A 167 -1 O ALA A 166 N ILE A 149 SHEET 1 C 2 LYS A 117 THR A 118 0 SHEET 2 C 2 THR A 122 ILE A 123 -1 O ILE A 123 N LYS A 117 SHEET 1 D 2 VAL B 340 LYS B 342 0 SHEET 2 D 2 THR B 345 HIS B 347 -1 O HIS B 347 N VAL B 340 SHEET 1 E 2 VAL B 395 VAL B 397 0 SHEET 2 E 2 ILE B 439 ASP B 441 -1 O ILE B 440 N GLN B 396 SHEET 1 F 2 LYS B 417 THR B 418 0 SHEET 2 F 2 THR B 422 ILE B 423 -1 O ILE B 423 N LYS B 417 SHEET 1 G 2 GLY B 448 VAL B 454 0 SHEET 2 G 2 VAL B 462 GLN B 467 -1 O ALA B 466 N ILE B 449 SHEET 1 H 2 CYS C 543 CYS C 545 0 SHEET 2 H 2 CYS C 553 CYS C 555 -1 O ARG C 554 N ILE C 544 SSBOND 1 CYS C 512 CYS C 566 1555 1555 2.03 SSBOND 2 CYS C 513 CYS C 528 1555 1555 2.03 SSBOND 3 CYS C 516 CYS C 562 1555 1555 2.03 SSBOND 4 CYS C 518 CYS C 526 1555 1555 2.03 SSBOND 5 CYS C 536 CYS C 543 1555 1555 2.03 SSBOND 6 CYS C 540 CYS C 555 1555 1555 2.03 SSBOND 7 CYS C 545 CYS C 553 1555 1555 2.03 CISPEP 1 ILE C 522 PRO C 523 0 -0.83 CISPEP 2 MET C 549 PRO C 550 0 0.35 CRYST1 75.510 90.150 98.790 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013243 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011093 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010122 0.00000