HEADER LIGASE 06-JUL-07 2QJ0 TITLE STRUCTURE OF THE YEAST U-BOX-CONTAINING UBIQUITIN LIGASE UFD2P COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN CONJUGATION FACTOR E4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: UBIQUITIN FUSION DEGRADATION PROTEIN 2, UB FUSION PROTEIN 2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: UFD2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS HELICAL HAIRPIN, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR D.TU,A.T.BRUNGER REVDAT 5 20-NOV-24 2QJ0 1 REMARK REVDAT 4 20-OCT-21 2QJ0 1 SEQADV LINK REVDAT 3 24-FEB-09 2QJ0 1 VERSN REVDAT 2 16-OCT-07 2QJ0 1 JRNL REVDAT 1 18-SEP-07 2QJ0 0 JRNL AUTH D.TU,W.LI,Y.YE,A.T.BRUNGER JRNL TITL INAUGURAL ARTICLE: STRUCTURE AND FUNCTION OF THE YEAST JRNL TITL 2 U-BOX-CONTAINING UBIQUITIN LIGASE UFD2P. JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 15599 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 17890322 JRNL DOI 10.1073/PNAS.0701369104 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 87.4 REMARK 3 NUMBER OF REFLECTIONS : 34316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3396 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.74 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 32.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3410 REMARK 3 BIN FREE R VALUE : 0.4220 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 146 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7567 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM SIGMAA (A) : 0.55 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.51 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.67 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE NATIVE DATA WAS REALLY COLLECTED TO REMARK 3 2.65 A. BUT IN ORDER TO HAVE A CUTOFF OF I/SIGMA >= 2.0, THE REMARK 3 AUTHORS CHOSE TO REPORT ONLY TO 2.74 A IN THE PAPER. HOWEVER REMARK 3 DURING REFINEMENT, ALL DATA WERE USED. REMARK 4 REMARK 4 2QJ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000043658. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-06; 09-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALS; SSRL REMARK 200 BEAMLINE : 8.2.2; BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000; 0.97920, 0.97895, REMARK 200 0.91837 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111); FLAT REMARK 200 MIRROR (VERTICAL FOCUSING), REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37483 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.740 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05600 REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.39800 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.3M TRI-AMMONIUM REMARK 280 CITRATE (PH 7.2), 0.1M SODIUM CHLORIDE, 10MM DTT, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.89750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.42800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.39900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.42800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.89750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.39900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 HIS A -18 REMARK 465 MSE A -17 REMARK 465 ALA A -16 REMARK 465 SER A -15 REMARK 465 MSE A -14 REMARK 465 THR A -13 REMARK 465 GLY A -12 REMARK 465 GLY A -11 REMARK 465 GLN A -10 REMARK 465 GLN A -9 REMARK 465 MSE A -8 REMARK 465 GLY A -7 REMARK 465 ARG A -6 REMARK 465 GLU A 26 REMARK 465 GLU A 27 REMARK 465 VAL A 28 REMARK 465 PRO A 29 REMARK 465 GLN A 30 REMARK 465 GLY A 31 REMARK 465 SER A 32 REMARK 465 THR A 33 REMARK 465 ASN A 707 REMARK 465 ARG A 708 REMARK 465 ALA A 709 REMARK 465 ARG A 710 REMARK 465 GLY A 711 REMARK 465 ALA A 712 REMARK 465 PRO A 713 REMARK 465 PRO A 714 REMARK 465 THR A 715 REMARK 465 ARG A 716 REMARK 465 GLU A 717 REMARK 465 GLU A 718 REMARK 465 LYS A 952 REMARK 465 GLU A 953 REMARK 465 GLU A 954 REMARK 465 ALA A 955 REMARK 465 LYS A 956 REMARK 465 HIS A 957 REMARK 465 LYS A 958 REMARK 465 ALA A 959 REMARK 465 SER A 960 REMARK 465 GLU A 961 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 633 N - CA - C ANGL. DEV. = -16.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 14 -8.52 -51.81 REMARK 500 GLU A 49 -54.56 -130.81 REMARK 500 ASN A 50 101.99 -56.52 REMARK 500 LYS A 55 74.13 -115.58 REMARK 500 ARG A 72 0.06 -57.87 REMARK 500 ALA A 80 77.34 -173.21 REMARK 500 GLU A 81 -49.23 -142.50 REMARK 500 LEU A 102 44.67 -101.09 REMARK 500 GLN A 103 -36.67 -151.31 REMARK 500 GLU A 105 -80.74 -33.45 REMARK 500 ASN A 106 68.49 -118.30 REMARK 500 THR A 143 109.77 -50.37 REMARK 500 ALA A 144 -32.07 -143.18 REMARK 500 LEU A 168 -5.37 -53.59 REMARK 500 THR A 195 3.57 -62.11 REMARK 500 TYR A 204 3.88 59.92 REMARK 500 SER A 205 -4.67 -146.39 REMARK 500 ILE A 226 37.00 -99.69 REMARK 500 SER A 275 158.23 177.36 REMARK 500 TYR A 331 17.93 54.00 REMARK 500 ILE A 334 -4.33 -52.99 REMARK 500 PHE A 348 -76.28 -128.02 REMARK 500 SER A 359 -179.76 -177.20 REMARK 500 LYS A 370 7.89 -64.84 REMARK 500 LYS A 373 19.42 -66.45 REMARK 500 LYS A 378 51.99 -144.68 REMARK 500 PRO A 379 70.65 -55.71 REMARK 500 ASP A 485 108.50 -31.88 REMARK 500 HIS A 488 92.27 -62.83 REMARK 500 GLN A 494 170.60 -46.85 REMARK 500 ASP A 510 109.03 -13.63 REMARK 500 ALA A 512 -56.78 -28.81 REMARK 500 ARG A 551 25.83 49.80 REMARK 500 PRO A 553 0.51 -60.49 REMARK 500 PRO A 569 -16.66 -48.46 REMARK 500 ASN A 595 16.97 58.84 REMARK 500 GLU A 608 -70.71 -29.97 REMARK 500 LYS A 627 24.18 -61.93 REMARK 500 THR A 628 -146.45 -130.78 REMARK 500 SER A 630 85.79 -159.68 REMARK 500 SER A 631 66.73 67.70 REMARK 500 GLN A 633 45.25 -95.13 REMARK 500 ASN A 669 40.19 -154.57 REMARK 500 VAL A 698 14.96 -58.36 REMARK 500 HIS A 699 -40.58 -130.66 REMARK 500 GLU A 704 -8.32 -59.83 REMARK 500 LEU A 705 46.11 -82.71 REMARK 500 LYS A 790 -82.05 -41.85 REMARK 500 PRO A 792 -71.61 -20.14 REMARK 500 ASN A 831 118.27 -160.32 REMARK 500 REMARK 500 THIS ENTRY HAS 72 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QIZ RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN A DIFFERENT CONFORMATION. DBREF 2QJ0 A 1 961 UNP P54860 UFD2_YEAST 1 961 SEQADV 2QJ0 GLY A -20 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 SER A -19 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 HIS A -18 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 MSE A -17 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 ALA A -16 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 SER A -15 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 MSE A -14 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 THR A -13 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 GLY A -12 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 GLY A -11 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 GLN A -10 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 GLN A -9 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 MSE A -8 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 GLY A -7 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 ARG A -6 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 GLY A -5 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 SER A -4 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 GLU A -3 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 PHE A -2 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 ARG A -1 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 SER A 0 UNP P54860 EXPRESSION TAG SEQADV 2QJ0 MSE A 1 UNP P54860 MET 1 MODIFIED RESIDUE SEQADV 2QJ0 LEU A 102 UNP P54860 SER 102 ENGINEERED MUTATION SEQADV 2QJ0 MSE A 109 UNP P54860 MET 109 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 248 UNP P54860 MET 248 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 282 UNP P54860 MET 282 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 312 UNP P54860 MET 312 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 407 UNP P54860 MET 407 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 442 UNP P54860 MET 442 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 564 UNP P54860 MET 564 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 590 UNP P54860 MET 590 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 600 UNP P54860 MET 600 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 601 UNP P54860 MET 601 MODIFIED RESIDUE SEQADV 2QJ0 VAL A 677 UNP P54860 ASP 677 ENGINEERED MUTATION SEQADV 2QJ0 MSE A 680 UNP P54860 MET 680 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 745 UNP P54860 MET 745 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 771 UNP P54860 MET 771 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 890 UNP P54860 MET 890 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 894 UNP P54860 MET 894 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 905 UNP P54860 MET 905 MODIFIED RESIDUE SEQADV 2QJ0 MSE A 927 UNP P54860 MET 927 MODIFIED RESIDUE SEQRES 1 A 982 GLY SER HIS MSE ALA SER MSE THR GLY GLY GLN GLN MSE SEQRES 2 A 982 GLY ARG GLY SER GLU PHE ARG SER MSE THR ALA ILE GLU SEQRES 3 A 982 ASP ILE LEU GLN ILE THR THR ASP PRO SER ASP THR ARG SEQRES 4 A 982 GLY TYR SER LEU LEU LYS SER GLU GLU VAL PRO GLN GLY SEQRES 5 A 982 SER THR LEU GLY VAL ASP PHE ILE ASP THR LEU LEU LEU SEQRES 6 A 982 TYR GLN LEU THR GLU ASN GLU LYS LEU ASP LYS PRO PHE SEQRES 7 A 982 GLU TYR LEU ASN ASP CYS PHE ARG ARG ASN GLN GLN GLN SEQRES 8 A 982 LYS ARG ILE THR LYS ASN LYS PRO ASN ALA GLU SER LEU SEQRES 9 A 982 HIS SER THR PHE GLN GLU ILE ASP ARG LEU VAL ILE GLY SEQRES 10 A 982 TYR GLY VAL VAL ALA LEU GLN ILE GLU ASN PHE CYS MSE SEQRES 11 A 982 ASN GLY ALA PHE ILE ASN TYR ILE THR GLY ILE VAL SER SEQRES 12 A 982 ASN VAL ASN SER TYR THR ASP PHE LEU SER GLN ILE ILE SEQRES 13 A 982 GLN ARG ALA ILE LEU GLU GLY THR ALA LEU ASP LEU LEU SEQRES 14 A 982 ASN ALA VAL PHE PRO THR LEU LEU GLU TYR CYS ASN LYS SEQRES 15 A 982 HIS VAL SER HIS PHE ASP LEU ASN GLU SER VAL ILE TYR SEQRES 16 A 982 ASN ASN VAL LEU THR ILE PHE GLU LEU PHE VAL THR PHE SEQRES 17 A 982 LYS PRO ILE ALA GLU ILE PHE THR LYS ILE ASP GLY PHE SEQRES 18 A 982 PHE ALA ASP TYR SER CYS LYS PRO GLN ASP PHE GLU ARG SEQRES 19 A 982 LYS THR ILE LEU GLY PRO ILE LEU SER LEU SER PRO ILE SEQRES 20 A 982 GLU ALA ALA VAL ALA ILE ARG ASN TYR GLY ASP ASN LEU SEQRES 21 A 982 LEU ARG SER LYS GLN GLN THR ALA MSE ILE HIS GLU SER SEQRES 22 A 982 LEU GLN ALA GLU HIS LYS VAL VAL ILE ASP ARG LEU PHE SEQRES 23 A 982 PHE ILE VAL ASP LYS LEU VAL ARG GLY SER LEU ASN SER SEQRES 24 A 982 ARG THR ASP MSE ILE SER TYR PHE ALA HIS ILE ALA ASN SEQRES 25 A 982 LYS ASN HIS LEU ARG ARG ALA ASP HIS PRO PRO PHE LYS SEQRES 26 A 982 GLU LEU SER SER ASN GLY PHE MSE SER ASN ILE THR LEU SEQRES 27 A 982 LEU LEU VAL ARG PHE SER GLN PRO PHE LEU ASP ILE SER SEQRES 28 A 982 TYR LYS LYS ILE ASP LYS ILE ASP ALA ASN TYR PHE ASN SEQRES 29 A 982 ASN PRO SER LEU PHE ILE ASP LEU SER GLY GLU THR ARG SEQRES 30 A 982 LEU ASN SER ASP PHE LYS GLU ALA ASP ALA PHE TYR ASP SEQRES 31 A 982 LYS ASN ARG LYS THR ALA ASP SER LYS PRO ASN PHE ILE SEQRES 32 A 982 SER ASP CYS PHE PHE LEU THR LEU THR TYR LEU HIS TYR SEQRES 33 A 982 GLY LEU GLY GLY THR LEU SER PHE GLU GLU LYS MSE GLY SEQRES 34 A 982 SER GLU ILE LYS ALA LEU LYS GLU GLU ILE GLU LYS VAL SEQRES 35 A 982 LYS LYS ILE ALA ALA ASN HIS ASP VAL PHE ALA ARG PHE SEQRES 36 A 982 ILE THR ALA GLN LEU SER LYS MSE GLU LYS ALA LEU LYS SEQRES 37 A 982 THR THR GLU SER LEU ARG PHE ALA LEU GLN GLY PHE PHE SEQRES 38 A 982 ALA HIS ARG SER LEU GLN LEU GLU VAL PHE ASP PHE ILE SEQRES 39 A 982 CYS GLY ALA SER THR PHE LEU ILE ARG VAL VAL ASP PRO SEQRES 40 A 982 GLU HIS GLU PHE PRO PHE LYS GLN ILE LYS LEU PRO LEU SEQRES 41 A 982 ILE PRO ASP GLN ILE GLY VAL GLU ASN VAL ASP ASN ALA SEQRES 42 A 982 ASP PHE LEU ARG ALA HIS ALA PRO VAL PRO PHE LYS TYR SEQRES 43 A 982 TYR PRO GLU PHE VAL VAL GLU GLY PRO VAL ASN TYR SER SEQRES 44 A 982 LEU TYR ILE SER LYS TYR GLN THR SER PRO ILE PHE ARG SEQRES 45 A 982 ASN PRO ARG LEU GLY SER PHE VAL GLU PHE THR THR MSE SEQRES 46 A 982 VAL LEU ARG CYS PRO GLU LEU VAL SER ASN PRO HIS LEU SEQRES 47 A 982 LYS GLY LYS LEU VAL GLN LEU LEU SER VAL GLY ALA MSE SEQRES 48 A 982 PRO LEU THR ASP ASN SER PRO GLY PHE MSE MSE ASP ILE SEQRES 49 A 982 PHE GLU HIS ASP GLU LEU VAL ASN LYS ASN LEU LEU TYR SEQRES 50 A 982 ALA LEU LEU ASP PHE TYR VAL ILE VAL GLU LYS THR GLY SEQRES 51 A 982 SER SER SER GLN PHE TYR ASP LYS PHE ASN SER ARG TYR SEQRES 52 A 982 SER ILE SER ILE ILE LEU GLU GLU LEU TYR TYR LYS ILE SEQRES 53 A 982 PRO SER TYR LYS ASN GLN LEU ILE TRP GLN SER GLN ASN SEQRES 54 A 982 ASN ALA ASP PHE PHE VAL ARG PHE VAL ALA ARG MSE LEU SEQRES 55 A 982 ASN ASP LEU THR PHE LEU LEU ASP GLU GLY LEU SER ASN SEQRES 56 A 982 LEU ALA GLU VAL HIS ASN ILE GLN ASN GLU LEU ASP ASN SEQRES 57 A 982 ARG ALA ARG GLY ALA PRO PRO THR ARG GLU GLU GLU ASP SEQRES 58 A 982 LYS GLU LEU GLN THR ARG LEU ALA SER ALA SER ARG GLN SEQRES 59 A 982 ALA LYS SER SER CYS GLY LEU ALA ASP LYS SER MSE LYS SEQRES 60 A 982 LEU PHE GLU ILE TYR SER LYS ASP ILE PRO ALA ALA PHE SEQRES 61 A 982 VAL THR PRO GLU ILE VAL TYR ARG LEU ALA SER MSE LEU SEQRES 62 A 982 ASN TYR ASN LEU GLU SER LEU VAL GLY PRO LYS CYS GLY SEQRES 63 A 982 GLU LEU LYS VAL LYS ASP PRO GLN SER TYR SER PHE ASN SEQRES 64 A 982 PRO LYS ASP LEU LEU LYS ALA LEU THR THR VAL TYR ILE SEQRES 65 A 982 ASN LEU SER GLU GLN SER GLU PHE ILE SER ALA VAL ALA SEQRES 66 A 982 LYS ASP GLU ARG SER PHE ASN ARG ASN LEU PHE VAL ARG SEQRES 67 A 982 ALA VAL ASP ILE LEU GLY ARG LYS THR GLY LEU ALA SER SEQRES 68 A 982 PRO GLU PHE ILE GLU LYS LEU LEU ASN PHE ALA ASN LYS SEQRES 69 A 982 ALA GLU GLU GLN ARG LYS ALA ASP GLU GLU GLU ASP LEU SEQRES 70 A 982 GLU TYR GLY ASP VAL PRO ASP GLU PHE LEU ASP PRO LEU SEQRES 71 A 982 MSE TYR THR ILE MSE LYS ASP PRO VAL ILE LEU PRO ALA SEQRES 72 A 982 SER LYS MSE ASN ILE ASP ARG SER THR ILE LYS ALA HIS SEQRES 73 A 982 LEU LEU SER ASP SER THR ASP PRO PHE ASN ARG MSE PRO SEQRES 74 A 982 LEU LYS LEU GLU ASP VAL THR PRO ASN GLU GLU LEU ARG SEQRES 75 A 982 GLN LYS ILE LEU CYS PHE LYS LYS GLN LYS LYS GLU GLU SEQRES 76 A 982 ALA LYS HIS LYS ALA SER GLU MODRES 2QJ0 MSE A 1 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 109 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 248 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 282 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 312 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 407 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 442 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 564 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 590 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 600 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 601 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 680 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 745 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 771 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 890 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 894 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 905 MET SELENOMETHIONINE MODRES 2QJ0 MSE A 927 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 109 8 HET MSE A 248 8 HET MSE A 282 8 HET MSE A 312 8 HET MSE A 407 8 HET MSE A 442 8 HET MSE A 564 8 HET MSE A 590 8 HET MSE A 600 8 HET MSE A 601 8 HET MSE A 680 8 HET MSE A 745 8 HET MSE A 771 8 HET MSE A 890 8 HET MSE A 894 8 HET MSE A 905 8 HET MSE A 927 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 2 HOH *94(H2 O) HELIX 1 1 GLU A -3 GLN A 9 1 13 HELIX 2 2 PHE A 38 GLU A 49 1 12 HELIX 3 3 LYS A 55 LYS A 75 1 21 HELIX 4 4 GLU A 81 LEU A 102 1 22 HELIX 5 5 ALA A 112 ASN A 123 1 12 HELIX 6 6 VAL A 124 SER A 126 5 3 HELIX 7 7 TYR A 127 GLU A 141 1 15 HELIX 8 8 ALA A 144 HIS A 162 1 19 HELIX 9 9 GLU A 170 THR A 186 1 17 HELIX 10 10 PHE A 187 THR A 195 1 9 HELIX 11 11 LEU A 217 SER A 222 1 6 HELIX 12 12 GLU A 227 TYR A 235 1 9 HELIX 13 13 SER A 242 SER A 275 1 34 HELIX 14 14 SER A 275 LYS A 292 1 18 HELIX 15 15 ASN A 293 ALA A 298 5 6 HELIX 16 16 PRO A 302 LEU A 306 5 5 HELIX 17 17 SER A 308 GLN A 324 1 17 HELIX 18 18 ASP A 338 ASN A 344 5 7 HELIX 19 19 ASP A 360 LYS A 370 1 11 HELIX 20 20 ASN A 380 GLY A 396 1 17 HELIX 21 21 GLY A 396 LYS A 406 1 11 HELIX 22 22 LYS A 406 LYS A 422 1 17 HELIX 23 23 HIS A 428 ALA A 461 1 34 HELIX 24 24 HIS A 462 ASP A 485 1 24 HELIX 25 25 ASP A 510 HIS A 518 1 9 HELIX 26 26 PRO A 522 PRO A 527 5 6 HELIX 27 27 GLU A 528 SER A 542 1 15 HELIX 28 28 ARG A 554 CYS A 568 1 15 HELIX 29 29 ASN A 574 GLY A 588 1 15 HELIX 30 30 MSE A 600 ASP A 607 1 8 HELIX 31 31 ASP A 607 VAL A 625 1 19 HELIX 32 32 TYR A 635 ILE A 655 1 21 HELIX 33 33 ILE A 655 ASN A 669 1 15 HELIX 34 34 ASN A 669 GLU A 704 1 36 HELIX 35 35 GLU A 719 ILE A 755 1 37 HELIX 36 36 PRO A 756 VAL A 760 5 5 HELIX 37 37 THR A 761 GLY A 781 1 21 HELIX 38 38 GLY A 781 GLU A 786 1 6 HELIX 39 39 ASP A 791 SER A 796 5 6 HELIX 40 40 ASN A 798 SER A 814 1 17 HELIX 41 41 GLN A 816 ASP A 826 1 11 HELIX 42 42 ASN A 831 ILE A 841 1 11 HELIX 43 43 PRO A 851 GLY A 879 1 29 HELIX 44 44 PRO A 882 LEU A 886 5 5 HELIX 45 45 ARG A 909 LEU A 917 1 9 HELIX 46 46 ASN A 937 PHE A 947 1 11 SHEET 1 A 2 ILE A 10 THR A 11 0 SHEET 2 A 2 SER A 21 LEU A 22 1 O SER A 21 N THR A 11 SHEET 1 B 3 ASN A 906 ASP A 908 0 SHEET 2 B 3 PRO A 897 ILE A 899 -1 N VAL A 898 O ILE A 907 SHEET 3 B 3 THR A 935 PRO A 936 -1 O THR A 935 N ILE A 899 LINK C SER A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N THR A 2 1555 1555 1.33 LINK C CYS A 108 N MSE A 109 1555 1555 1.33 LINK C MSE A 109 N ASN A 110 1555 1555 1.33 LINK C ALA A 247 N MSE A 248 1555 1555 1.33 LINK C MSE A 248 N ILE A 249 1555 1555 1.33 LINK C ASP A 281 N MSE A 282 1555 1555 1.33 LINK C MSE A 282 N ILE A 283 1555 1555 1.33 LINK C PHE A 311 N MSE A 312 1555 1555 1.33 LINK C MSE A 312 N SER A 313 1555 1555 1.33 LINK C LYS A 406 N MSE A 407 1555 1555 1.33 LINK C MSE A 407 N GLY A 408 1555 1555 1.33 LINK C LYS A 441 N MSE A 442 1555 1555 1.33 LINK C MSE A 442 N GLU A 443 1555 1555 1.33 LINK C THR A 563 N MSE A 564 1555 1555 1.33 LINK C MSE A 564 N VAL A 565 1555 1555 1.33 LINK C ALA A 589 N MSE A 590 1555 1555 1.33 LINK C MSE A 590 N PRO A 591 1555 1555 1.34 LINK C PHE A 599 N MSE A 600 1555 1555 1.33 LINK C MSE A 600 N MSE A 601 1555 1555 1.33 LINK C MSE A 601 N ASP A 602 1555 1555 1.33 LINK C ARG A 679 N MSE A 680 1555 1555 1.33 LINK C MSE A 680 N LEU A 681 1555 1555 1.33 LINK C SER A 744 N MSE A 745 1555 1555 1.33 LINK C MSE A 745 N LYS A 746 1555 1555 1.33 LINK C SER A 770 N MSE A 771 1555 1555 1.33 LINK C MSE A 771 N LEU A 772 1555 1555 1.33 LINK C LEU A 889 N MSE A 890 1555 1555 1.33 LINK C MSE A 890 N TYR A 891 1555 1555 1.33 LINK C ILE A 893 N MSE A 894 1555 1555 1.33 LINK C MSE A 894 N LYS A 895 1555 1555 1.33 LINK C LYS A 904 N MSE A 905 1555 1555 1.33 LINK C MSE A 905 N ASN A 906 1555 1555 1.33 LINK C ARG A 926 N MSE A 927 1555 1555 1.33 LINK C MSE A 927 N PRO A 928 1555 1555 1.33 CISPEP 1 PHE A 490 PRO A 491 0 0.04 CISPEP 2 LEU A 497 PRO A 498 0 -0.11 CISPEP 3 SER A 850 PRO A 851 0 -0.41 CRYST1 65.795 122.798 178.856 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015199 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005591 0.00000