data_2QK9 # _entry.id 2QK9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2QK9 pdb_00002qk9 10.2210/pdb2qk9/pdb NDB PH0040 ? ? RCSB RCSB043703 ? ? WWPDB D_1000043703 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-11-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2024-02-21 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 2QK9 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-07-10 _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2QKB . unspecified PDB 2QKK . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nowotny, M.' 1 'Gaidamakov, S.A.' 2 'Ghirlando, R.' 3 'Cerritelli, S.M.' 4 'Crouch, R.J.' 5 'Yang, W.' 6 # _citation.id primary _citation.title 'Structure of Human RNase H1 Complexed with an RNA/DNA Hybrid: Insight into HIV Reverse Transcription' _citation.journal_abbrev Mol.Cell _citation.journal_volume 28 _citation.page_first 264 _citation.page_last 276 _citation.year 2007 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17964265 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2007.08.015 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nowotny, M.' 1 ? primary 'Gaidamakov, S.A.' 2 ? primary 'Ghirlando, R.' 3 ? primary 'Cerritelli, S.M.' 4 ? primary 'Crouch, R.J.' 5 ? primary 'Yang, W.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3'" 5708.443 1 ? ? ? ? 2 polymer syn "5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*T)-3'" 5556.603 1 ? ? ? ? 3 polymer man 'Ribonuclease H1' 17104.279 1 3.1.26.4 D210N 'C-terminal domain (residues 134-286)' ? 4 non-polymer syn 'SULFATE ION' 96.063 7 ? ? ? ? 5 non-polymer syn HEXANE-1,6-DIAMINE 116.205 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 non-polymer syn 'CITRATE ANION' 189.100 1 ? ? ? ? 8 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 9 water nat water 18.015 109 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Hs-RNase HC; RNase H1; Ribonuclease H type II' # _entity_name_sys.entity_id 3 _entity_name_sys.name E.C.3.1.26.4 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no AGUGCGACACCUGAUUCC AGUGCGACACCUGAUUCC B ? 2 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DA)(DT)(DC)(DA)(DG)(DG)(DT)(DG)(DT)(DC)(DG)(DC)(DA)(DC)(DT)' GGAATCAGGTGTCGCACT C ? 3 'polypeptide(L)' no no ;GSHMGDFVVVYTDGCCSSNGRRRPRAGIGVYWGPGHPLNVGIRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTNSM FTINGITNWVQGWKKNGWKTSAGKEVINKEDFVALERLTQGMDIQWMHVPGHSGFIGNEEADRLAREGAKQSED ; ;GSHMGDFVVVYTDGCCSSNGRRRPRAGIGVYWGPGHPLNVGIRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTNSM FTINGITNWVQGWKKNGWKTSAGKEVINKEDFVALERLTQGMDIQWMHVPGHSGFIGNEEADRLAREGAKQSED ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SULFATE ION' SO4 5 HEXANE-1,6-DIAMINE 16D 6 'SODIUM ION' NA 7 'CITRATE ANION' FLC 8 GLYCEROL GOL 9 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 G n 1 3 U n 1 4 G n 1 5 C n 1 6 G n 1 7 A n 1 8 C n 1 9 A n 1 10 C n 1 11 C n 1 12 U n 1 13 G n 1 14 A n 1 15 U n 1 16 U n 1 17 C n 1 18 C n 2 1 DG n 2 2 DG n 2 3 DA n 2 4 DA n 2 5 DT n 2 6 DC n 2 7 DA n 2 8 DG n 2 9 DG n 2 10 DT n 2 11 DG n 2 12 DT n 2 13 DC n 2 14 DG n 2 15 DC n 2 16 DA n 2 17 DC n 2 18 DT n 3 1 GLY n 3 2 SER n 3 3 HIS n 3 4 MET n 3 5 GLY n 3 6 ASP n 3 7 PHE n 3 8 VAL n 3 9 VAL n 3 10 VAL n 3 11 TYR n 3 12 THR n 3 13 ASP n 3 14 GLY n 3 15 CYS n 3 16 CYS n 3 17 SER n 3 18 SER n 3 19 ASN n 3 20 GLY n 3 21 ARG n 3 22 ARG n 3 23 ARG n 3 24 PRO n 3 25 ARG n 3 26 ALA n 3 27 GLY n 3 28 ILE n 3 29 GLY n 3 30 VAL n 3 31 TYR n 3 32 TRP n 3 33 GLY n 3 34 PRO n 3 35 GLY n 3 36 HIS n 3 37 PRO n 3 38 LEU n 3 39 ASN n 3 40 VAL n 3 41 GLY n 3 42 ILE n 3 43 ARG n 3 44 LEU n 3 45 PRO n 3 46 GLY n 3 47 ARG n 3 48 GLN n 3 49 THR n 3 50 ASN n 3 51 GLN n 3 52 ARG n 3 53 ALA n 3 54 GLU n 3 55 ILE n 3 56 HIS n 3 57 ALA n 3 58 ALA n 3 59 CYS n 3 60 LYS n 3 61 ALA n 3 62 ILE n 3 63 GLU n 3 64 GLN n 3 65 ALA n 3 66 LYS n 3 67 THR n 3 68 GLN n 3 69 ASN n 3 70 ILE n 3 71 ASN n 3 72 LYS n 3 73 LEU n 3 74 VAL n 3 75 LEU n 3 76 TYR n 3 77 THR n 3 78 ASN n 3 79 SER n 3 80 MET n 3 81 PHE n 3 82 THR n 3 83 ILE n 3 84 ASN n 3 85 GLY n 3 86 ILE n 3 87 THR n 3 88 ASN n 3 89 TRP n 3 90 VAL n 3 91 GLN n 3 92 GLY n 3 93 TRP n 3 94 LYS n 3 95 LYS n 3 96 ASN n 3 97 GLY n 3 98 TRP n 3 99 LYS n 3 100 THR n 3 101 SER n 3 102 ALA n 3 103 GLY n 3 104 LYS n 3 105 GLU n 3 106 VAL n 3 107 ILE n 3 108 ASN n 3 109 LYS n 3 110 GLU n 3 111 ASP n 3 112 PHE n 3 113 VAL n 3 114 ALA n 3 115 LEU n 3 116 GLU n 3 117 ARG n 3 118 LEU n 3 119 THR n 3 120 GLN n 3 121 GLY n 3 122 MET n 3 123 ASP n 3 124 ILE n 3 125 GLN n 3 126 TRP n 3 127 MET n 3 128 HIS n 3 129 VAL n 3 130 PRO n 3 131 GLY n 3 132 HIS n 3 133 SER n 3 134 GLY n 3 135 PHE n 3 136 ILE n 3 137 GLY n 3 138 ASN n 3 139 GLU n 3 140 GLU n 3 141 ALA n 3 142 ASP n 3 143 ARG n 3 144 LEU n 3 145 ALA n 3 146 ARG n 3 147 GLU n 3 148 GLY n 3 149 ALA n 3 150 LYS n 3 151 GLN n 3 152 SER n 3 153 GLU n 3 154 ASP n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'RNASEH1, RNH1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 16D non-polymer . HEXANE-1,6-DIAMINE 1,6-DIAMINOHEXANE 'C6 H16 N2' 116.205 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 FLC non-polymer . 'CITRATE ANION' ? 'C6 H5 O7 -3' 189.100 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 1 1 A A B . n A 1 2 G 2 2 2 G G B . n A 1 3 U 3 3 3 U U B . n A 1 4 G 4 4 4 G G B . n A 1 5 C 5 5 5 C C B . n A 1 6 G 6 6 6 G G B . n A 1 7 A 7 7 7 A A B . n A 1 8 C 8 8 8 C C B . n A 1 9 A 9 9 9 A A B . n A 1 10 C 10 10 10 C C B . n A 1 11 C 11 11 11 C C B . n A 1 12 U 12 12 12 U U B . n A 1 13 G 13 13 13 G G B . n A 1 14 A 14 14 14 A A B . n A 1 15 U 15 15 15 U U B . n A 1 16 U 16 16 16 U U B . n A 1 17 C 17 17 17 C C B . n A 1 18 C 18 18 18 C C B . n B 2 1 DG 1 19 19 DG DG C . n B 2 2 DG 2 20 20 DG DG C . n B 2 3 DA 3 21 21 DA DA C . n B 2 4 DA 4 22 22 DA DA C . n B 2 5 DT 5 23 23 DT DT C . n B 2 6 DC 6 24 24 DC DC C . n B 2 7 DA 7 25 25 DA DA C . n B 2 8 DG 8 26 26 DG DG C . n B 2 9 DG 9 27 27 DG DG C . n B 2 10 DT 10 28 28 DT DT C . n B 2 11 DG 11 29 29 DG DG C . n B 2 12 DT 12 30 30 DT DT C . n B 2 13 DC 13 31 31 DC DC C . n B 2 14 DG 14 32 32 DG DG C . n B 2 15 DC 15 33 33 DC DC C . n B 2 16 DA 16 34 34 DA DA C . n B 2 17 DC 17 35 35 DC DC C . n B 2 18 DT 18 36 36 DT DT C . n C 3 1 GLY 1 133 ? ? ? A . n C 3 2 SER 2 134 134 SER SER A . n C 3 3 HIS 3 135 135 HIS HIS A . n C 3 4 MET 4 136 136 MET MET A . n C 3 5 GLY 5 137 137 GLY GLY A . n C 3 6 ASP 6 138 138 ASP ASP A . n C 3 7 PHE 7 139 139 PHE PHE A . n C 3 8 VAL 8 140 140 VAL VAL A . n C 3 9 VAL 9 141 141 VAL VAL A . n C 3 10 VAL 10 142 142 VAL VAL A . n C 3 11 TYR 11 143 143 TYR TYR A . n C 3 12 THR 12 144 144 THR THR A . n C 3 13 ASP 13 145 145 ASP ASP A . n C 3 14 GLY 14 146 146 GLY GLY A . n C 3 15 CYS 15 147 147 CYS CYS A . n C 3 16 CYS 16 148 148 CYS CYS A . n C 3 17 SER 17 149 149 SER SER A . n C 3 18 SER 18 150 150 SER SER A . n C 3 19 ASN 19 151 151 ASN ASN A . n C 3 20 GLY 20 152 152 GLY GLY A . n C 3 21 ARG 21 153 153 ARG ARG A . n C 3 22 ARG 22 154 154 ARG ARG A . n C 3 23 ARG 23 155 155 ARG ARG A . n C 3 24 PRO 24 156 156 PRO PRO A . n C 3 25 ARG 25 157 157 ARG ARG A . n C 3 26 ALA 26 158 158 ALA ALA A . n C 3 27 GLY 27 159 159 GLY GLY A . n C 3 28 ILE 28 160 160 ILE ILE A . n C 3 29 GLY 29 161 161 GLY GLY A . n C 3 30 VAL 30 162 162 VAL VAL A . n C 3 31 TYR 31 163 163 TYR TYR A . n C 3 32 TRP 32 164 164 TRP TRP A . n C 3 33 GLY 33 165 165 GLY GLY A . n C 3 34 PRO 34 166 166 PRO PRO A . n C 3 35 GLY 35 167 167 GLY GLY A . n C 3 36 HIS 36 168 168 HIS HIS A . n C 3 37 PRO 37 169 169 PRO PRO A . n C 3 38 LEU 38 170 170 LEU LEU A . n C 3 39 ASN 39 171 171 ASN ASN A . n C 3 40 VAL 40 172 172 VAL VAL A . n C 3 41 GLY 41 173 173 GLY GLY A . n C 3 42 ILE 42 174 174 ILE ILE A . n C 3 43 ARG 43 175 175 ARG ARG A . n C 3 44 LEU 44 176 176 LEU LEU A . n C 3 45 PRO 45 177 177 PRO PRO A . n C 3 46 GLY 46 178 178 GLY GLY A . n C 3 47 ARG 47 179 179 ARG ARG A . n C 3 48 GLN 48 180 180 GLN GLN A . n C 3 49 THR 49 181 181 THR THR A . n C 3 50 ASN 50 182 182 ASN ASN A . n C 3 51 GLN 51 183 183 GLN GLN A . n C 3 52 ARG 52 184 184 ARG ARG A . n C 3 53 ALA 53 185 185 ALA ALA A . n C 3 54 GLU 54 186 186 GLU GLU A . n C 3 55 ILE 55 187 187 ILE ILE A . n C 3 56 HIS 56 188 188 HIS HIS A . n C 3 57 ALA 57 189 189 ALA ALA A . n C 3 58 ALA 58 190 190 ALA ALA A . n C 3 59 CYS 59 191 191 CYS CYS A . n C 3 60 LYS 60 192 192 LYS LYS A . n C 3 61 ALA 61 193 193 ALA ALA A . n C 3 62 ILE 62 194 194 ILE ILE A . n C 3 63 GLU 63 195 195 GLU GLU A . n C 3 64 GLN 64 196 196 GLN GLN A . n C 3 65 ALA 65 197 197 ALA ALA A . n C 3 66 LYS 66 198 198 LYS LYS A . n C 3 67 THR 67 199 199 THR THR A . n C 3 68 GLN 68 200 200 GLN GLN A . n C 3 69 ASN 69 201 201 ASN ASN A . n C 3 70 ILE 70 202 202 ILE ILE A . n C 3 71 ASN 71 203 203 ASN ASN A . n C 3 72 LYS 72 204 204 LYS LYS A . n C 3 73 LEU 73 205 205 LEU LEU A . n C 3 74 VAL 74 206 206 VAL VAL A . n C 3 75 LEU 75 207 207 LEU LEU A . n C 3 76 TYR 76 208 208 TYR TYR A . n C 3 77 THR 77 209 209 THR THR A . n C 3 78 ASN 78 210 210 ASN ASP A . n C 3 79 SER 79 211 211 SER SER A . n C 3 80 MET 80 212 212 MET MET A . n C 3 81 PHE 81 213 213 PHE PHE A . n C 3 82 THR 82 214 214 THR THR A . n C 3 83 ILE 83 215 215 ILE ILE A . n C 3 84 ASN 84 216 216 ASN ASN A . n C 3 85 GLY 85 217 217 GLY GLY A . n C 3 86 ILE 86 218 218 ILE ILE A . n C 3 87 THR 87 219 219 THR THR A . n C 3 88 ASN 88 220 220 ASN ASN A . n C 3 89 TRP 89 221 221 TRP TRP A . n C 3 90 VAL 90 222 222 VAL VAL A . n C 3 91 GLN 91 223 223 GLN GLN A . n C 3 92 GLY 92 224 224 GLY GLY A . n C 3 93 TRP 93 225 225 TRP TRP A . n C 3 94 LYS 94 226 226 LYS LYS A . n C 3 95 LYS 95 227 227 LYS LYS A . n C 3 96 ASN 96 228 228 ASN ASN A . n C 3 97 GLY 97 229 229 GLY GLY A . n C 3 98 TRP 98 230 230 TRP TRP A . n C 3 99 LYS 99 231 231 LYS LYS A . n C 3 100 THR 100 232 232 THR THR A . n C 3 101 SER 101 233 233 SER SER A . n C 3 102 ALA 102 234 234 ALA ALA A . n C 3 103 GLY 103 235 235 GLY GLY A . n C 3 104 LYS 104 236 236 LYS LYS A . n C 3 105 GLU 105 237 237 GLU GLU A . n C 3 106 VAL 106 238 238 VAL VAL A . n C 3 107 ILE 107 239 239 ILE ILE A . n C 3 108 ASN 108 240 240 ASN ASN A . n C 3 109 LYS 109 241 241 LYS LYS A . n C 3 110 GLU 110 242 242 GLU GLU A . n C 3 111 ASP 111 243 243 ASP ASP A . n C 3 112 PHE 112 244 244 PHE PHE A . n C 3 113 VAL 113 245 245 VAL VAL A . n C 3 114 ALA 114 246 246 ALA ALA A . n C 3 115 LEU 115 247 247 LEU LEU A . n C 3 116 GLU 116 248 248 GLU GLU A . n C 3 117 ARG 117 249 249 ARG ARG A . n C 3 118 LEU 118 250 250 LEU LEU A . n C 3 119 THR 119 251 251 THR THR A . n C 3 120 GLN 120 252 252 GLN GLN A . n C 3 121 GLY 121 253 253 GLY GLY A . n C 3 122 MET 122 254 254 MET MET A . n C 3 123 ASP 123 255 255 ASP ASP A . n C 3 124 ILE 124 256 256 ILE ILE A . n C 3 125 GLN 125 257 257 GLN GLN A . n C 3 126 TRP 126 258 258 TRP TRP A . n C 3 127 MET 127 259 259 MET MET A . n C 3 128 HIS 128 260 260 HIS HIS A . n C 3 129 VAL 129 261 261 VAL VAL A . n C 3 130 PRO 130 262 262 PRO PRO A . n C 3 131 GLY 131 263 263 GLY GLY A . n C 3 132 HIS 132 264 264 HIS HIS A . n C 3 133 SER 133 265 265 SER SER A . n C 3 134 GLY 134 266 266 GLY GLY A . n C 3 135 PHE 135 267 267 PHE PHE A . n C 3 136 ILE 136 268 268 ILE ILE A . n C 3 137 GLY 137 269 269 GLY GLY A . n C 3 138 ASN 138 270 270 ASN ASN A . n C 3 139 GLU 139 271 271 GLU GLU A . n C 3 140 GLU 140 272 272 GLU GLU A . n C 3 141 ALA 141 273 273 ALA ALA A . n C 3 142 ASP 142 274 274 ASP ASP A . n C 3 143 ARG 143 275 275 ARG ARG A . n C 3 144 LEU 144 276 276 LEU LEU A . n C 3 145 ALA 145 277 277 ALA ALA A . n C 3 146 ARG 146 278 278 ARG ARG A . n C 3 147 GLU 147 279 279 GLU GLU A . n C 3 148 GLY 148 280 280 GLY GLY A . n C 3 149 ALA 149 281 281 ALA ALA A . n C 3 150 LYS 150 282 282 LYS LYS A . n C 3 151 GLN 151 283 283 GLN GLN A . n C 3 152 SER 152 284 284 SER SER A . n C 3 153 GLU 153 285 285 GLU GLU A . n C 3 154 ASP 154 286 286 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 1 1007 1007 SO4 SO4 B . E 4 SO4 1 1008 1008 SO4 SO4 B . F 4 SO4 1 1009 1009 SO4 SO4 C . G 5 16D 1 1004 1004 16D 16D C . H 6 NA 1 9001 9001 NA NA A . I 7 FLC 1 1001 1001 FLC FLC A . J 4 SO4 1 1005 1005 SO4 SO4 A . K 4 SO4 1 1006 1006 SO4 SO4 A . L 4 SO4 1 1010 1010 SO4 SO4 A . M 4 SO4 1 1011 1011 SO4 SO4 A . N 8 GOL 1 1002 1002 GOL GOL A . O 8 GOL 1 1003 1003 GOL GOL A . P 9 HOH 1 1009 1009 HOH HOH B . P 9 HOH 2 1010 1010 HOH HOH B . P 9 HOH 3 1011 1011 HOH HOH B . P 9 HOH 4 1012 1012 HOH HOH B . P 9 HOH 5 1013 1013 HOH HOH B . P 9 HOH 6 1014 1014 HOH HOH B . P 9 HOH 7 1015 1015 HOH HOH B . P 9 HOH 8 1016 1016 HOH HOH B . P 9 HOH 9 1017 1017 HOH HOH B . P 9 HOH 10 1018 1018 HOH HOH B . P 9 HOH 11 1019 1019 HOH HOH B . P 9 HOH 12 1020 1020 HOH HOH B . P 9 HOH 13 1021 1021 HOH HOH B . P 9 HOH 14 1022 1022 HOH HOH B . P 9 HOH 15 1023 1023 HOH HOH B . P 9 HOH 16 1024 1024 HOH HOH B . P 9 HOH 17 1025 1025 HOH HOH B . P 9 HOH 18 1026 1026 HOH HOH B . P 9 HOH 19 1027 1027 HOH HOH B . P 9 HOH 20 1028 1028 HOH HOH B . P 9 HOH 21 1029 1029 HOH HOH B . P 9 HOH 22 1030 1030 HOH HOH B . Q 9 HOH 1 1010 1010 HOH HOH C . Q 9 HOH 2 1011 1011 HOH HOH C . Q 9 HOH 3 1012 1012 HOH HOH C . Q 9 HOH 4 1013 1013 HOH HOH C . Q 9 HOH 5 1014 1014 HOH HOH C . Q 9 HOH 6 1015 1015 HOH HOH C . Q 9 HOH 7 1016 1016 HOH HOH C . Q 9 HOH 8 1017 1017 HOH HOH C . Q 9 HOH 9 1018 1018 HOH HOH C . Q 9 HOH 10 1019 1019 HOH HOH C . Q 9 HOH 11 1020 1020 HOH HOH C . Q 9 HOH 12 1021 1021 HOH HOH C . Q 9 HOH 13 1022 1022 HOH HOH C . Q 9 HOH 14 1023 1023 HOH HOH C . Q 9 HOH 15 1024 1024 HOH HOH C . Q 9 HOH 16 1025 1025 HOH HOH C . Q 9 HOH 17 1026 1026 HOH HOH C . Q 9 HOH 18 1027 1027 HOH HOH C . Q 9 HOH 19 1028 1028 HOH HOH C . Q 9 HOH 20 1029 1029 HOH HOH C . Q 9 HOH 21 1030 1030 HOH HOH C . Q 9 HOH 22 1031 1031 HOH HOH C . Q 9 HOH 23 1032 1032 HOH HOH C . Q 9 HOH 24 1033 1033 HOH HOH C . Q 9 HOH 25 1034 1034 HOH HOH C . Q 9 HOH 26 1035 1035 HOH HOH C . R 9 HOH 1 9002 1 HOH HOH A . R 9 HOH 2 9003 2 HOH HOH A . R 9 HOH 3 9004 3 HOH HOH A . R 9 HOH 4 9005 4 HOH HOH A . R 9 HOH 5 9006 5 HOH HOH A . R 9 HOH 6 9007 6 HOH HOH A . R 9 HOH 7 9008 7 HOH HOH A . R 9 HOH 8 9009 8 HOH HOH A . R 9 HOH 9 9010 9 HOH HOH A . R 9 HOH 10 9011 11 HOH HOH A . R 9 HOH 11 9012 12 HOH HOH A . R 9 HOH 12 9013 14 HOH HOH A . R 9 HOH 13 9014 15 HOH HOH A . R 9 HOH 14 9015 16 HOH HOH A . R 9 HOH 15 9016 18 HOH HOH A . R 9 HOH 16 9017 19 HOH HOH A . R 9 HOH 17 9018 20 HOH HOH A . R 9 HOH 18 9019 21 HOH HOH A . R 9 HOH 19 9020 22 HOH HOH A . R 9 HOH 20 9021 23 HOH HOH A . R 9 HOH 21 9022 27 HOH HOH A . R 9 HOH 22 9023 28 HOH HOH A . R 9 HOH 23 9024 32 HOH HOH A . R 9 HOH 24 9025 33 HOH HOH A . R 9 HOH 25 9026 36 HOH HOH A . R 9 HOH 26 9027 38 HOH HOH A . R 9 HOH 27 9028 40 HOH HOH A . R 9 HOH 28 9029 41 HOH HOH A . R 9 HOH 29 9030 43 HOH HOH A . R 9 HOH 30 9031 46 HOH HOH A . R 9 HOH 31 9032 47 HOH HOH A . R 9 HOH 32 9033 49 HOH HOH A . R 9 HOH 33 9034 50 HOH HOH A . R 9 HOH 34 9035 53 HOH HOH A . R 9 HOH 35 9036 54 HOH HOH A . R 9 HOH 36 9037 55 HOH HOH A . R 9 HOH 37 9038 58 HOH HOH A . R 9 HOH 38 9039 60 HOH HOH A . R 9 HOH 39 9040 61 HOH HOH A . R 9 HOH 40 9041 64 HOH HOH A . R 9 HOH 41 9042 65 HOH HOH A . R 9 HOH 42 9043 66 HOH HOH A . R 9 HOH 43 9044 69 HOH HOH A . R 9 HOH 44 9045 70 HOH HOH A . R 9 HOH 45 9046 71 HOH HOH A . R 9 HOH 46 9047 72 HOH HOH A . R 9 HOH 47 9048 80 HOH HOH A . R 9 HOH 48 9049 81 HOH HOH A . R 9 HOH 49 9050 83 HOH HOH A . R 9 HOH 50 9051 85 HOH HOH A . R 9 HOH 51 9052 88 HOH HOH A . R 9 HOH 52 9053 90 HOH HOH A . R 9 HOH 53 9054 91 HOH HOH A . R 9 HOH 54 9055 93 HOH HOH A . R 9 HOH 55 9056 100 HOH HOH A . R 9 HOH 56 9057 104 HOH HOH A . R 9 HOH 57 9058 105 HOH HOH A . R 9 HOH 58 9059 106 HOH HOH A . R 9 HOH 59 9060 107 HOH HOH A . R 9 HOH 60 9061 108 HOH HOH A . R 9 HOH 61 9062 109 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 134 ? OG ? C SER 2 OG 2 1 Y 1 A HIS 135 ? CG ? C HIS 3 CG 3 1 Y 1 A HIS 135 ? ND1 ? C HIS 3 ND1 4 1 Y 1 A HIS 135 ? CD2 ? C HIS 3 CD2 5 1 Y 1 A HIS 135 ? CE1 ? C HIS 3 CE1 6 1 Y 1 A HIS 135 ? NE2 ? C HIS 3 NE2 7 1 Y 1 A ASP 286 ? CG ? C ASP 154 CG 8 1 Y 1 A ASP 286 ? OD1 ? C ASP 154 OD1 9 1 Y 1 A ASP 286 ? OD2 ? C ASP 154 OD2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 # _cell.entry_id 2QK9 _cell.length_a 158.578 _cell.length_b 158.578 _cell.length_c 142.055 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2QK9 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2QK9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '1.5 M ammonium sulfate, 0.1 M Na citrate (pH 5.6) 20mM ATP or 3% 1,6-diaminohexane, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 '(NH4)2SO4' ? ? ? 1 2 1 'sodium citrate' ? ? ? 1 3 1 1,6-diaminohexane ? ? ? 1 4 2 '(NH4)2SO4' ? ? ? 1 5 2 'sodium citrate' ? ? ? 1 6 2 1,6-diaminohexane ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2QK9 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.55 _reflns.d_resolution_low 30 _reflns.number_all 22505 _reflns.number_obs 21164 _reflns.percent_possible_obs 94 _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 38.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.55 _reflns_shell.d_res_low 2.64 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.456 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.1 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2QK9 _refine.ls_d_res_high 2.55 _refine.ls_d_res_low 30 _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 22505 _refine.ls_number_reflns_obs 21164 _refine.ls_number_reflns_R_free 2085 _refine.ls_percent_reflns_obs 94 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.19 _refine.ls_R_factor_R_free 0.216 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'Original low resolution strcture solved with the same crystal and SeMet SIRAS' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean 43.3 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details 'The last round of refinement in CNS was carried out with the pucker restraints for the DNA strand removed' _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1188 _refine_hist.pdbx_number_atoms_nucleic_acid 746 _refine_hist.pdbx_number_atoms_ligand 69 _refine_hist.number_atoms_solvent 109 _refine_hist.number_atoms_total 2112 _refine_hist.d_res_high 2.55 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.013483 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.86942 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.418 1.5 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.437 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.904 2.0 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.908 2.5 ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 2QK9 _struct.title 'Human RNase H catalytic domain mutant D210N in complex with 18-mer RNA/DNA hybrid' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2QK9 _struct_keywords.pdbx_keywords HYDROLASE/DNA/RNA _struct_keywords.text 'RNase H; RNA/DNA hybrid, HYDROLASE-DNA-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 7 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 8 ? O N N 8 ? P N N 9 ? Q N N 9 ? R N N 9 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 3 UNP RNH1_HUMAN O60930 136 ;MGDFVVVYTDGCCSSNGRRRPRAGIGVYWGPGHPLNVGIRLPGRQTNQRAEIHAACKAIEQAKTQNINKLVLYTDSMFTI NGITNWVQGWKKNGWKTSAGKEVINKEDFVALERLTQGMDIQWMHVPGHSGFIGNEEADRLAREGAKQSED ; ? 2 1 PDB 2QK9 2QK9 ? ? ? 3 2 PDB 2QK9 2QK9 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2QK9 A 4 ? 154 ? O60930 136 ? 286 ? 136 286 2 2 2QK9 B 1 ? 18 ? 2QK9 1 ? 18 ? 1 18 3 3 2QK9 C 1 ? 18 ? 2QK9 19 ? 36 ? 19 36 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2QK9 GLY A 1 ? UNP O60930 ? ? 'expression tag' 133 1 1 2QK9 SER A 2 ? UNP O60930 ? ? 'expression tag' 134 2 1 2QK9 HIS A 3 ? UNP O60930 ? ? 'expression tag' 135 3 1 2QK9 ASN A 78 ? UNP O60930 ASP 210 'engineered mutation' 210 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 49 ? GLN C 68 ? THR A 181 GLN A 200 1 ? 20 HELX_P HELX_P2 2 SER C 79 ? ASN C 88 ? SER A 211 ASN A 220 1 ? 10 HELX_P HELX_P3 3 ASN C 88 ? LYS C 95 ? ASN A 220 LYS A 227 1 ? 8 HELX_P HELX_P4 4 ASN C 108 ? GLN C 120 ? ASN A 240 GLN A 252 1 ? 13 HELX_P HELX_P5 5 PHE C 135 ? ALA C 149 ? PHE A 267 ALA A 281 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A A 9 "O3'" ? ? ? 1_555 H NA . NA ? ? B A 9 A NA 9001 1_555 ? ? ? ? ? ? ? 2.858 ? ? metalc2 metalc ? ? A C 10 OP1 ? ? ? 1_555 H NA . NA ? ? B C 10 A NA 9001 1_555 ? ? ? ? ? ? ? 2.475 ? ? metalc3 metalc ? ? C ASP 13 OD2 ? ? ? 1_555 H NA . NA ? ? A ASP 145 A NA 9001 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc4 metalc ? ? C GLU 54 OE1 ? ? ? 1_555 H NA . NA ? ? A GLU 186 A NA 9001 1_555 ? ? ? ? ? ? ? 2.931 ? ? metalc5 metalc ? ? C GLU 54 OE2 ? ? ? 1_555 H NA . NA ? ? A GLU 186 A NA 9001 1_555 ? ? ? ? ? ? ? 2.535 ? ? metalc6 metalc ? ? C ASN 78 ND2 ? ? ? 1_555 H NA . NA ? ? A ASN 210 A NA 9001 1_555 ? ? ? ? ? ? ? 2.554 ? ? metalc7 metalc ? ? H NA . NA ? ? ? 1_555 R HOH . O ? ? A NA 9001 A HOH 9037 1_555 ? ? ? ? ? ? ? 2.878 ? ? hydrog1 hydrog ? ? A A 1 N1 ? ? ? 1_555 B DT 18 N3 ? ? B A 1 C DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A A 1 N6 ? ? ? 1_555 B DT 18 O4 ? ? B A 1 C DT 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 2 N1 ? ? ? 1_555 B DC 17 N3 ? ? B G 2 C DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N2 ? ? ? 1_555 B DC 17 O2 ? ? B G 2 C DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 B DC 17 N4 ? ? B G 2 C DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A U 3 N3 ? ? ? 1_555 B DA 16 N1 ? ? B U 3 C DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 O4 ? ? ? 1_555 B DA 16 N6 ? ? B U 3 C DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 4 N1 ? ? ? 1_555 B DC 15 N3 ? ? B G 4 C DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N2 ? ? ? 1_555 B DC 15 O2 ? ? B G 4 C DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 O6 ? ? ? 1_555 B DC 15 N4 ? ? B G 4 C DC 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 N3 ? ? ? 1_555 B DG 14 N1 ? ? B C 5 C DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N4 ? ? ? 1_555 B DG 14 O6 ? ? B C 5 C DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 O2 ? ? ? 1_555 B DG 14 N2 ? ? B C 5 C DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 N1 ? ? ? 1_555 B DC 13 N3 ? ? B G 6 C DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N2 ? ? ? 1_555 B DC 13 O2 ? ? B G 6 C DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 O6 ? ? ? 1_555 B DC 13 N4 ? ? B G 6 C DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 7 N1 ? ? ? 1_555 B DT 12 N3 ? ? B A 7 C DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 7 N6 ? ? ? 1_555 B DT 12 O4 ? ? B A 7 C DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 N3 ? ? ? 1_555 B DG 11 N1 ? ? B C 8 C DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 8 N4 ? ? ? 1_555 B DG 11 O6 ? ? B C 8 C DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 8 O2 ? ? ? 1_555 B DG 11 N2 ? ? B C 8 C DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A A 9 N1 ? ? ? 1_555 B DT 10 N3 ? ? B A 9 C DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A A 9 N6 ? ? ? 1_555 B DT 10 O4 ? ? B A 9 C DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 10 N3 ? ? ? 1_555 B DG 9 N1 ? ? B C 10 C DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 10 N4 ? ? ? 1_555 B DG 9 O6 ? ? B C 10 C DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 10 O2 ? ? ? 1_555 B DG 9 N2 ? ? B C 10 C DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 11 N3 ? ? ? 1_555 B DG 8 N1 ? ? B C 11 C DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 11 N4 ? ? ? 1_555 B DG 8 O6 ? ? B C 11 C DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 11 O2 ? ? ? 1_555 B DG 8 N2 ? ? B C 11 C DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 12 N3 ? ? ? 1_555 B DA 7 N1 ? ? B U 12 C DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 12 O4 ? ? ? 1_555 B DA 7 N6 ? ? B U 12 C DA 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 13 N1 ? ? ? 1_555 B DC 6 N3 ? ? B G 13 C DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 13 N2 ? ? ? 1_555 B DC 6 O2 ? ? B G 13 C DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 13 O6 ? ? ? 1_555 B DC 6 N4 ? ? B G 13 C DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A A 14 N1 ? ? ? 1_555 B DT 5 N3 ? ? B A 14 C DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A A 14 N6 ? ? ? 1_555 B DT 5 O4 ? ? B A 14 C DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 15 N3 ? ? ? 1_555 B DA 4 N1 ? ? B U 15 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 15 O4 ? ? ? 1_555 B DA 4 N6 ? ? B U 15 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 16 N3 ? ? ? 1_555 B DA 3 N1 ? ? B U 16 C DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A U 16 O4 ? ? ? 1_555 B DA 3 N6 ? ? B U 16 C DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 17 N3 ? ? ? 1_555 B DG 2 N1 ? ? B C 17 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 17 N4 ? ? ? 1_555 B DG 2 O6 ? ? B C 17 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 17 O2 ? ? ? 1_555 B DG 2 N2 ? ? B C 17 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 18 N3 ? ? ? 1_555 B DG 1 N1 ? ? B C 18 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 18 N4 ? ? ? 1_555 B DG 1 O6 ? ? B C 18 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 18 O2 ? ? ? 1_555 B DG 1 N2 ? ? B C 18 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" ? A A 9 ? B A 9 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OP1 ? A C 10 ? B C 10 ? 1_555 54.2 ? 2 "O3'" ? A A 9 ? B A 9 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OD2 ? C ASP 13 ? A ASP 145 ? 1_555 139.1 ? 3 OP1 ? A C 10 ? B C 10 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OD2 ? C ASP 13 ? A ASP 145 ? 1_555 85.5 ? 4 "O3'" ? A A 9 ? B A 9 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OE1 ? C GLU 54 ? A GLU 186 ? 1_555 125.7 ? 5 OP1 ? A C 10 ? B C 10 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OE1 ? C GLU 54 ? A GLU 186 ? 1_555 145.8 ? 6 OD2 ? C ASP 13 ? A ASP 145 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OE1 ? C GLU 54 ? A GLU 186 ? 1_555 82.4 ? 7 "O3'" ? A A 9 ? B A 9 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OE2 ? C GLU 54 ? A GLU 186 ? 1_555 79.0 ? 8 OP1 ? A C 10 ? B C 10 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OE2 ? C GLU 54 ? A GLU 186 ? 1_555 117.3 ? 9 OD2 ? C ASP 13 ? A ASP 145 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OE2 ? C GLU 54 ? A GLU 186 ? 1_555 120.2 ? 10 OE1 ? C GLU 54 ? A GLU 186 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 OE2 ? C GLU 54 ? A GLU 186 ? 1_555 46.8 ? 11 "O3'" ? A A 9 ? B A 9 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 ND2 ? C ASN 78 ? A ASN 210 ? 1_555 94.0 ? 12 OP1 ? A C 10 ? B C 10 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 ND2 ? C ASN 78 ? A ASN 210 ? 1_555 84.9 ? 13 OD2 ? C ASP 13 ? A ASP 145 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 ND2 ? C ASN 78 ? A ASN 210 ? 1_555 88.7 ? 14 OE1 ? C GLU 54 ? A GLU 186 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 ND2 ? C ASN 78 ? A ASN 210 ? 1_555 126.5 ? 15 OE2 ? C GLU 54 ? A GLU 186 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 ND2 ? C ASN 78 ? A ASN 210 ? 1_555 143.1 ? 16 "O3'" ? A A 9 ? B A 9 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 O ? R HOH . ? A HOH 9037 ? 1_555 138.1 ? 17 OP1 ? A C 10 ? B C 10 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 O ? R HOH . ? A HOH 9037 ? 1_555 147.2 ? 18 OD2 ? C ASP 13 ? A ASP 145 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 O ? R HOH . ? A HOH 9037 ? 1_555 79.5 ? 19 OE1 ? C GLU 54 ? A GLU 186 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 O ? R HOH . ? A HOH 9037 ? 1_555 60.6 ? 20 OE2 ? C GLU 54 ? A GLU 186 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 O ? R HOH . ? A HOH 9037 ? 1_555 95.4 ? 21 ND2 ? C ASN 78 ? A ASN 210 ? 1_555 NA ? H NA . ? A NA 9001 ? 1_555 O ? R HOH . ? A HOH 9037 ? 1_555 65.9 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 40 ? ARG C 43 ? VAL A 172 ARG A 175 A 2 ARG C 25 ? TYR C 31 ? ARG A 157 TYR A 163 A 3 VAL C 8 ? SER C 17 ? VAL A 140 SER A 149 A 4 LYS C 72 ? THR C 77 ? LYS A 204 THR A 209 A 5 ASP C 123 ? HIS C 128 ? ASP A 255 HIS A 260 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE C 42 ? O ILE A 174 N ILE C 28 ? N ILE A 160 A 2 3 O ARG C 25 ? O ARG A 157 N SER C 17 ? N SER A 149 A 3 4 N VAL C 10 ? N VAL A 142 O TYR C 76 ? O TYR A 208 A 4 5 N LEU C 75 ? N LEU A 207 O MET C 127 ? O MET A 259 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC2 Software B SO4 1007 ? 3 'BINDING SITE FOR RESIDUE SO4 B 1007' AC3 Software B SO4 1008 ? 3 'BINDING SITE FOR RESIDUE SO4 B 1008' AC4 Software C SO4 1009 ? 2 'BINDING SITE FOR RESIDUE SO4 C 1009' AC5 Software A NA 9001 ? 6 'BINDING SITE FOR RESIDUE NA A 9001' AC6 Software A FLC 1001 ? 13 'BINDING SITE FOR RESIDUE FLC A 1001' AC7 Software A SO4 1005 ? 4 'BINDING SITE FOR RESIDUE SO4 A 1005' AC8 Software A SO4 1006 ? 4 'BINDING SITE FOR RESIDUE SO4 A 1006' AC9 Software A SO4 1010 ? 3 'BINDING SITE FOR RESIDUE SO4 A 1010' AD1 Software A SO4 1011 ? 3 'BINDING SITE FOR RESIDUE SO4 A 1011' BC1 Software C 16D 1004 ? 7 'BINDING SITE FOR RESIDUE 16D C 1004' BC2 Software A GOL 1002 ? 6 'BINDING SITE FOR RESIDUE GOL A 1002' BC3 Software A GOL 1003 ? 3 'BINDING SITE FOR RESIDUE GOL A 1003' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC2 3 C A 8 ? C B 8 . ? 1_555 ? 2 AC2 3 A A 9 ? A B 9 . ? 1_555 ? 3 AC2 3 16D G . ? 16D C 1004 . ? 1_555 ? 4 AC3 3 G A 13 ? G B 13 . ? 1_555 ? 5 AC3 3 A A 14 ? A B 14 . ? 1_555 ? 6 AC3 3 DA B 7 ? DA C 25 . ? 1_555 ? 7 AC4 2 DT B 12 ? DT C 30 . ? 1_555 ? 8 AC4 2 DC B 13 ? DC C 31 . ? 1_555 ? 9 AC5 6 ASP C 13 ? ASP A 145 . ? 1_555 ? 10 AC5 6 GLU C 54 ? GLU A 186 . ? 1_555 ? 11 AC5 6 ASN C 78 ? ASN A 210 . ? 1_555 ? 12 AC5 6 HOH R . ? HOH A 9037 . ? 1_555 ? 13 AC5 6 A A 9 ? A B 9 . ? 1_555 ? 14 AC5 6 C A 10 ? C B 10 . ? 1_555 ? 15 AC6 13 VAL C 8 ? VAL A 140 . ? 3_565 ? 16 AC6 13 TRP C 32 ? TRP A 164 . ? 3_565 ? 17 AC6 13 HIS C 36 ? HIS A 168 . ? 3_565 ? 18 AC6 13 GLY C 41 ? GLY A 173 . ? 1_555 ? 19 AC6 13 GLN C 68 ? GLN A 200 . ? 3_565 ? 20 AC6 13 ILE C 70 ? ILE A 202 . ? 3_565 ? 21 AC6 13 GLN C 151 ? GLN A 283 . ? 1_555 ? 22 AC6 13 HOH R . ? HOH A 9014 . ? 1_555 ? 23 AC6 13 HOH R . ? HOH A 9018 . ? 1_555 ? 24 AC6 13 HOH R . ? HOH A 9021 . ? 1_555 ? 25 AC6 13 HOH R . ? HOH A 9038 . ? 1_555 ? 26 AC6 13 HOH R . ? HOH A 9041 . ? 1_555 ? 27 AC6 13 HOH R . ? HOH A 9045 . ? 1_555 ? 28 AC7 4 ARG C 25 ? ARG A 157 . ? 1_555 ? 29 AC7 4 ARG C 43 ? ARG A 175 . ? 1_555 ? 30 AC7 4 SER C 152 ? SER A 284 . ? 1_555 ? 31 AC7 4 GLU C 153 ? GLU A 285 . ? 1_555 ? 32 AC8 4 HIS C 132 ? HIS A 264 . ? 1_555 ? 33 AC8 4 HOH R . ? HOH A 9054 . ? 1_555 ? 34 AC8 4 C A 10 ? C B 10 . ? 1_555 ? 35 AC8 4 C A 11 ? C B 11 . ? 1_555 ? 36 AC9 3 ARG C 21 ? ARG A 153 . ? 1_555 ? 37 AC9 3 DG B 8 ? DG C 26 . ? 1_555 ? 38 AC9 3 DG B 9 ? DG C 27 . ? 1_555 ? 39 AD1 3 ARG C 21 ? ARG A 153 . ? 1_555 ? 40 AD1 3 ARG C 22 ? ARG A 154 . ? 1_555 ? 41 AD1 3 HOH R . ? HOH A 9058 . ? 1_555 ? 42 BC1 7 A A 7 ? A B 7 . ? 1_555 ? 43 BC1 7 SO4 D . ? SO4 B 1007 . ? 1_555 ? 44 BC1 7 HOH P . ? HOH B 1027 . ? 1_555 ? 45 BC1 7 DT B 10 ? DT C 28 . ? 1_555 ? 46 BC1 7 DG B 11 ? DG C 29 . ? 1_555 ? 47 BC1 7 DT B 12 ? DT C 30 . ? 1_555 ? 48 BC1 7 HOH Q . ? HOH C 1033 . ? 1_555 ? 49 BC2 6 ARG C 47 ? ARG A 179 . ? 1_555 ? 50 BC2 6 ARG C 52 ? ARG A 184 . ? 1_555 ? 51 BC2 6 ILE C 107 ? ILE A 239 . ? 1_555 ? 52 BC2 6 ASN C 108 ? ASN A 240 . ? 1_555 ? 53 BC2 6 GLU C 110 ? GLU A 242 . ? 1_555 ? 54 BC2 6 ASP C 111 ? ASP A 243 . ? 1_555 ? 55 BC3 3 HIS C 56 ? HIS A 188 . ? 1_555 ? 56 BC3 3 CYS C 59 ? CYS A 191 . ? 1_555 ? 57 BC3 3 GLU C 63 ? GLU A 195 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OA1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 FLC _pdbx_validate_close_contact.auth_seq_id_1 1001 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 9021 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.06 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" C DG 29 ? ? P C DG 29 ? ? OP1 C DG 29 ? ? 97.92 105.70 -7.78 0.90 N 2 1 "C5'" C DG 29 ? ? "C4'" C DG 29 ? ? "O4'" C DG 29 ? ? 96.70 109.30 -12.60 1.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 135 ? ? 13.99 -89.57 2 1 MET A 136 ? ? 88.18 103.74 3 1 ASN A 220 ? ? -164.17 -69.17 4 1 ASN A 228 ? ? -143.95 19.66 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 133 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id C _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 16D N1 N N N 1 16D C1 C N N 2 16D C2 C N N 3 16D C3 C N N 4 16D C4 C N N 5 16D C5 C N N 6 16D C6 C N N 7 16D N2 N N N 8 16D HN11 H N N 9 16D HN12 H N N 10 16D H11 H N N 11 16D H12 H N N 12 16D H21 H N N 13 16D H22 H N N 14 16D H31 H N N 15 16D H32 H N N 16 16D H41 H N N 17 16D H42 H N N 18 16D H51 H N N 19 16D H52 H N N 20 16D H61 H N N 21 16D H62 H N N 22 16D HN21 H N N 23 16D HN22 H N N 24 A OP3 O N N 25 A P P N N 26 A OP1 O N N 27 A OP2 O N N 28 A "O5'" O N N 29 A "C5'" C N N 30 A "C4'" C N R 31 A "O4'" O N N 32 A "C3'" C N S 33 A "O3'" O N N 34 A "C2'" C N R 35 A "O2'" O N N 36 A "C1'" C N R 37 A N9 N Y N 38 A C8 C Y N 39 A N7 N Y N 40 A C5 C Y N 41 A C6 C Y N 42 A N6 N N N 43 A N1 N Y N 44 A C2 C Y N 45 A N3 N Y N 46 A C4 C Y N 47 A HOP3 H N N 48 A HOP2 H N N 49 A "H5'" H N N 50 A "H5''" H N N 51 A "H4'" H N N 52 A "H3'" H N N 53 A "HO3'" H N N 54 A "H2'" H N N 55 A "HO2'" H N N 56 A "H1'" H N N 57 A H8 H N N 58 A H61 H N N 59 A H62 H N N 60 A H2 H N N 61 ALA N N N N 62 ALA CA C N S 63 ALA C C N N 64 ALA O O N N 65 ALA CB C N N 66 ALA OXT O N N 67 ALA H H N N 68 ALA H2 H N N 69 ALA HA H N N 70 ALA HB1 H N N 71 ALA HB2 H N N 72 ALA HB3 H N N 73 ALA HXT H N N 74 ARG N N N N 75 ARG CA C N S 76 ARG C C N N 77 ARG O O N N 78 ARG CB C N N 79 ARG CG C N N 80 ARG CD C N N 81 ARG NE N N N 82 ARG CZ C N N 83 ARG NH1 N N N 84 ARG NH2 N N N 85 ARG OXT O N N 86 ARG H H N N 87 ARG H2 H N N 88 ARG HA H N N 89 ARG HB2 H N N 90 ARG HB3 H N N 91 ARG HG2 H N N 92 ARG HG3 H N N 93 ARG HD2 H N N 94 ARG HD3 H N N 95 ARG HE H N N 96 ARG HH11 H N N 97 ARG HH12 H N N 98 ARG HH21 H N N 99 ARG HH22 H N N 100 ARG HXT H N N 101 ASN N N N N 102 ASN CA C N S 103 ASN C C N N 104 ASN O O N N 105 ASN CB C N N 106 ASN CG C N N 107 ASN OD1 O N N 108 ASN ND2 N N N 109 ASN OXT O N N 110 ASN H H N N 111 ASN H2 H N N 112 ASN HA H N N 113 ASN HB2 H N N 114 ASN HB3 H N N 115 ASN HD21 H N N 116 ASN HD22 H N N 117 ASN HXT H N N 118 ASP N N N N 119 ASP CA C N S 120 ASP C C N N 121 ASP O O N N 122 ASP CB C N N 123 ASP CG C N N 124 ASP OD1 O N N 125 ASP OD2 O N N 126 ASP OXT O N N 127 ASP H H N N 128 ASP H2 H N N 129 ASP HA H N N 130 ASP HB2 H N N 131 ASP HB3 H N N 132 ASP HD2 H N N 133 ASP HXT H N N 134 C OP3 O N N 135 C P P N N 136 C OP1 O N N 137 C OP2 O N N 138 C "O5'" O N N 139 C "C5'" C N N 140 C "C4'" C N R 141 C "O4'" O N N 142 C "C3'" C N S 143 C "O3'" O N N 144 C "C2'" C N R 145 C "O2'" O N N 146 C "C1'" C N R 147 C N1 N N N 148 C C2 C N N 149 C O2 O N N 150 C N3 N N N 151 C C4 C N N 152 C N4 N N N 153 C C5 C N N 154 C C6 C N N 155 C HOP3 H N N 156 C HOP2 H N N 157 C "H5'" H N N 158 C "H5''" H N N 159 C "H4'" H N N 160 C "H3'" H N N 161 C "HO3'" H N N 162 C "H2'" H N N 163 C "HO2'" H N N 164 C "H1'" H N N 165 C H41 H N N 166 C H42 H N N 167 C H5 H N N 168 C H6 H N N 169 CYS N N N N 170 CYS CA C N R 171 CYS C C N N 172 CYS O O N N 173 CYS CB C N N 174 CYS SG S N N 175 CYS OXT O N N 176 CYS H H N N 177 CYS H2 H N N 178 CYS HA H N N 179 CYS HB2 H N N 180 CYS HB3 H N N 181 CYS HG H N N 182 CYS HXT H N N 183 DA OP3 O N N 184 DA P P N N 185 DA OP1 O N N 186 DA OP2 O N N 187 DA "O5'" O N N 188 DA "C5'" C N N 189 DA "C4'" C N R 190 DA "O4'" O N N 191 DA "C3'" C N S 192 DA "O3'" O N N 193 DA "C2'" C N N 194 DA "C1'" C N R 195 DA N9 N Y N 196 DA C8 C Y N 197 DA N7 N Y N 198 DA C5 C Y N 199 DA C6 C Y N 200 DA N6 N N N 201 DA N1 N Y N 202 DA C2 C Y N 203 DA N3 N Y N 204 DA C4 C Y N 205 DA HOP3 H N N 206 DA HOP2 H N N 207 DA "H5'" H N N 208 DA "H5''" H N N 209 DA "H4'" H N N 210 DA "H3'" H N N 211 DA "HO3'" H N N 212 DA "H2'" H N N 213 DA "H2''" H N N 214 DA "H1'" H N N 215 DA H8 H N N 216 DA H61 H N N 217 DA H62 H N N 218 DA H2 H N N 219 DC OP3 O N N 220 DC P P N N 221 DC OP1 O N N 222 DC OP2 O N N 223 DC "O5'" O N N 224 DC "C5'" C N N 225 DC "C4'" C N R 226 DC "O4'" O N N 227 DC "C3'" C N S 228 DC "O3'" O N N 229 DC "C2'" C N N 230 DC "C1'" C N R 231 DC N1 N N N 232 DC C2 C N N 233 DC O2 O N N 234 DC N3 N N N 235 DC C4 C N N 236 DC N4 N N N 237 DC C5 C N N 238 DC C6 C N N 239 DC HOP3 H N N 240 DC HOP2 H N N 241 DC "H5'" H N N 242 DC "H5''" H N N 243 DC "H4'" H N N 244 DC "H3'" H N N 245 DC "HO3'" H N N 246 DC "H2'" H N N 247 DC "H2''" H N N 248 DC "H1'" H N N 249 DC H41 H N N 250 DC H42 H N N 251 DC H5 H N N 252 DC H6 H N N 253 DG OP3 O N N 254 DG P P N N 255 DG OP1 O N N 256 DG OP2 O N N 257 DG "O5'" O N N 258 DG "C5'" C N N 259 DG "C4'" C N R 260 DG "O4'" O N N 261 DG "C3'" C N S 262 DG "O3'" O N N 263 DG "C2'" C N N 264 DG "C1'" C N R 265 DG N9 N Y N 266 DG C8 C Y N 267 DG N7 N Y N 268 DG C5 C Y N 269 DG C6 C N N 270 DG O6 O N N 271 DG N1 N N N 272 DG C2 C N N 273 DG N2 N N N 274 DG N3 N N N 275 DG C4 C Y N 276 DG HOP3 H N N 277 DG HOP2 H N N 278 DG "H5'" H N N 279 DG "H5''" H N N 280 DG "H4'" H N N 281 DG "H3'" H N N 282 DG "HO3'" H N N 283 DG "H2'" H N N 284 DG "H2''" H N N 285 DG "H1'" H N N 286 DG H8 H N N 287 DG H1 H N N 288 DG H21 H N N 289 DG H22 H N N 290 DT OP3 O N N 291 DT P P N N 292 DT OP1 O N N 293 DT OP2 O N N 294 DT "O5'" O N N 295 DT "C5'" C N N 296 DT "C4'" C N R 297 DT "O4'" O N N 298 DT "C3'" C N S 299 DT "O3'" O N N 300 DT "C2'" C N N 301 DT "C1'" C N R 302 DT N1 N N N 303 DT C2 C N N 304 DT O2 O N N 305 DT N3 N N N 306 DT C4 C N N 307 DT O4 O N N 308 DT C5 C N N 309 DT C7 C N N 310 DT C6 C N N 311 DT HOP3 H N N 312 DT HOP2 H N N 313 DT "H5'" H N N 314 DT "H5''" H N N 315 DT "H4'" H N N 316 DT "H3'" H N N 317 DT "HO3'" H N N 318 DT "H2'" H N N 319 DT "H2''" H N N 320 DT "H1'" H N N 321 DT H3 H N N 322 DT H71 H N N 323 DT H72 H N N 324 DT H73 H N N 325 DT H6 H N N 326 FLC CAC C N N 327 FLC CA C N N 328 FLC CB C N N 329 FLC CBC C N N 330 FLC CG C N N 331 FLC CGC C N N 332 FLC OA1 O N N 333 FLC OA2 O N N 334 FLC OB1 O N N 335 FLC OB2 O N N 336 FLC OG1 O N N 337 FLC OG2 O N N 338 FLC OHB O N N 339 FLC HA1 H N N 340 FLC HA2 H N N 341 FLC HG1 H N N 342 FLC HG2 H N N 343 FLC HOB H N N 344 G OP3 O N N 345 G P P N N 346 G OP1 O N N 347 G OP2 O N N 348 G "O5'" O N N 349 G "C5'" C N N 350 G "C4'" C N R 351 G "O4'" O N N 352 G "C3'" C N S 353 G "O3'" O N N 354 G "C2'" C N R 355 G "O2'" O N N 356 G "C1'" C N R 357 G N9 N Y N 358 G C8 C Y N 359 G N7 N Y N 360 G C5 C Y N 361 G C6 C N N 362 G O6 O N N 363 G N1 N N N 364 G C2 C N N 365 G N2 N N N 366 G N3 N N N 367 G C4 C Y N 368 G HOP3 H N N 369 G HOP2 H N N 370 G "H5'" H N N 371 G "H5''" H N N 372 G "H4'" H N N 373 G "H3'" H N N 374 G "HO3'" H N N 375 G "H2'" H N N 376 G "HO2'" H N N 377 G "H1'" H N N 378 G H8 H N N 379 G H1 H N N 380 G H21 H N N 381 G H22 H N N 382 GLN N N N N 383 GLN CA C N S 384 GLN C C N N 385 GLN O O N N 386 GLN CB C N N 387 GLN CG C N N 388 GLN CD C N N 389 GLN OE1 O N N 390 GLN NE2 N N N 391 GLN OXT O N N 392 GLN H H N N 393 GLN H2 H N N 394 GLN HA H N N 395 GLN HB2 H N N 396 GLN HB3 H N N 397 GLN HG2 H N N 398 GLN HG3 H N N 399 GLN HE21 H N N 400 GLN HE22 H N N 401 GLN HXT H N N 402 GLU N N N N 403 GLU CA C N S 404 GLU C C N N 405 GLU O O N N 406 GLU CB C N N 407 GLU CG C N N 408 GLU CD C N N 409 GLU OE1 O N N 410 GLU OE2 O N N 411 GLU OXT O N N 412 GLU H H N N 413 GLU H2 H N N 414 GLU HA H N N 415 GLU HB2 H N N 416 GLU HB3 H N N 417 GLU HG2 H N N 418 GLU HG3 H N N 419 GLU HE2 H N N 420 GLU HXT H N N 421 GLY N N N N 422 GLY CA C N N 423 GLY C C N N 424 GLY O O N N 425 GLY OXT O N N 426 GLY H H N N 427 GLY H2 H N N 428 GLY HA2 H N N 429 GLY HA3 H N N 430 GLY HXT H N N 431 GOL C1 C N N 432 GOL O1 O N N 433 GOL C2 C N N 434 GOL O2 O N N 435 GOL C3 C N N 436 GOL O3 O N N 437 GOL H11 H N N 438 GOL H12 H N N 439 GOL HO1 H N N 440 GOL H2 H N N 441 GOL HO2 H N N 442 GOL H31 H N N 443 GOL H32 H N N 444 GOL HO3 H N N 445 HIS N N N N 446 HIS CA C N S 447 HIS C C N N 448 HIS O O N N 449 HIS CB C N N 450 HIS CG C Y N 451 HIS ND1 N Y N 452 HIS CD2 C Y N 453 HIS CE1 C Y N 454 HIS NE2 N Y N 455 HIS OXT O N N 456 HIS H H N N 457 HIS H2 H N N 458 HIS HA H N N 459 HIS HB2 H N N 460 HIS HB3 H N N 461 HIS HD1 H N N 462 HIS HD2 H N N 463 HIS HE1 H N N 464 HIS HE2 H N N 465 HIS HXT H N N 466 HOH O O N N 467 HOH H1 H N N 468 HOH H2 H N N 469 ILE N N N N 470 ILE CA C N S 471 ILE C C N N 472 ILE O O N N 473 ILE CB C N S 474 ILE CG1 C N N 475 ILE CG2 C N N 476 ILE CD1 C N N 477 ILE OXT O N N 478 ILE H H N N 479 ILE H2 H N N 480 ILE HA H N N 481 ILE HB H N N 482 ILE HG12 H N N 483 ILE HG13 H N N 484 ILE HG21 H N N 485 ILE HG22 H N N 486 ILE HG23 H N N 487 ILE HD11 H N N 488 ILE HD12 H N N 489 ILE HD13 H N N 490 ILE HXT H N N 491 LEU N N N N 492 LEU CA C N S 493 LEU C C N N 494 LEU O O N N 495 LEU CB C N N 496 LEU CG C N N 497 LEU CD1 C N N 498 LEU CD2 C N N 499 LEU OXT O N N 500 LEU H H N N 501 LEU H2 H N N 502 LEU HA H N N 503 LEU HB2 H N N 504 LEU HB3 H N N 505 LEU HG H N N 506 LEU HD11 H N N 507 LEU HD12 H N N 508 LEU HD13 H N N 509 LEU HD21 H N N 510 LEU HD22 H N N 511 LEU HD23 H N N 512 LEU HXT H N N 513 LYS N N N N 514 LYS CA C N S 515 LYS C C N N 516 LYS O O N N 517 LYS CB C N N 518 LYS CG C N N 519 LYS CD C N N 520 LYS CE C N N 521 LYS NZ N N N 522 LYS OXT O N N 523 LYS H H N N 524 LYS H2 H N N 525 LYS HA H N N 526 LYS HB2 H N N 527 LYS HB3 H N N 528 LYS HG2 H N N 529 LYS HG3 H N N 530 LYS HD2 H N N 531 LYS HD3 H N N 532 LYS HE2 H N N 533 LYS HE3 H N N 534 LYS HZ1 H N N 535 LYS HZ2 H N N 536 LYS HZ3 H N N 537 LYS HXT H N N 538 MET N N N N 539 MET CA C N S 540 MET C C N N 541 MET O O N N 542 MET CB C N N 543 MET CG C N N 544 MET SD S N N 545 MET CE C N N 546 MET OXT O N N 547 MET H H N N 548 MET H2 H N N 549 MET HA H N N 550 MET HB2 H N N 551 MET HB3 H N N 552 MET HG2 H N N 553 MET HG3 H N N 554 MET HE1 H N N 555 MET HE2 H N N 556 MET HE3 H N N 557 MET HXT H N N 558 NA NA NA N N 559 PHE N N N N 560 PHE CA C N S 561 PHE C C N N 562 PHE O O N N 563 PHE CB C N N 564 PHE CG C Y N 565 PHE CD1 C Y N 566 PHE CD2 C Y N 567 PHE CE1 C Y N 568 PHE CE2 C Y N 569 PHE CZ C Y N 570 PHE OXT O N N 571 PHE H H N N 572 PHE H2 H N N 573 PHE HA H N N 574 PHE HB2 H N N 575 PHE HB3 H N N 576 PHE HD1 H N N 577 PHE HD2 H N N 578 PHE HE1 H N N 579 PHE HE2 H N N 580 PHE HZ H N N 581 PHE HXT H N N 582 PRO N N N N 583 PRO CA C N S 584 PRO C C N N 585 PRO O O N N 586 PRO CB C N N 587 PRO CG C N N 588 PRO CD C N N 589 PRO OXT O N N 590 PRO H H N N 591 PRO HA H N N 592 PRO HB2 H N N 593 PRO HB3 H N N 594 PRO HG2 H N N 595 PRO HG3 H N N 596 PRO HD2 H N N 597 PRO HD3 H N N 598 PRO HXT H N N 599 SER N N N N 600 SER CA C N S 601 SER C C N N 602 SER O O N N 603 SER CB C N N 604 SER OG O N N 605 SER OXT O N N 606 SER H H N N 607 SER H2 H N N 608 SER HA H N N 609 SER HB2 H N N 610 SER HB3 H N N 611 SER HG H N N 612 SER HXT H N N 613 SO4 S S N N 614 SO4 O1 O N N 615 SO4 O2 O N N 616 SO4 O3 O N N 617 SO4 O4 O N N 618 THR N N N N 619 THR CA C N S 620 THR C C N N 621 THR O O N N 622 THR CB C N R 623 THR OG1 O N N 624 THR CG2 C N N 625 THR OXT O N N 626 THR H H N N 627 THR H2 H N N 628 THR HA H N N 629 THR HB H N N 630 THR HG1 H N N 631 THR HG21 H N N 632 THR HG22 H N N 633 THR HG23 H N N 634 THR HXT H N N 635 TRP N N N N 636 TRP CA C N S 637 TRP C C N N 638 TRP O O N N 639 TRP CB C N N 640 TRP CG C Y N 641 TRP CD1 C Y N 642 TRP CD2 C Y N 643 TRP NE1 N Y N 644 TRP CE2 C Y N 645 TRP CE3 C Y N 646 TRP CZ2 C Y N 647 TRP CZ3 C Y N 648 TRP CH2 C Y N 649 TRP OXT O N N 650 TRP H H N N 651 TRP H2 H N N 652 TRP HA H N N 653 TRP HB2 H N N 654 TRP HB3 H N N 655 TRP HD1 H N N 656 TRP HE1 H N N 657 TRP HE3 H N N 658 TRP HZ2 H N N 659 TRP HZ3 H N N 660 TRP HH2 H N N 661 TRP HXT H N N 662 TYR N N N N 663 TYR CA C N S 664 TYR C C N N 665 TYR O O N N 666 TYR CB C N N 667 TYR CG C Y N 668 TYR CD1 C Y N 669 TYR CD2 C Y N 670 TYR CE1 C Y N 671 TYR CE2 C Y N 672 TYR CZ C Y N 673 TYR OH O N N 674 TYR OXT O N N 675 TYR H H N N 676 TYR H2 H N N 677 TYR HA H N N 678 TYR HB2 H N N 679 TYR HB3 H N N 680 TYR HD1 H N N 681 TYR HD2 H N N 682 TYR HE1 H N N 683 TYR HE2 H N N 684 TYR HH H N N 685 TYR HXT H N N 686 U OP3 O N N 687 U P P N N 688 U OP1 O N N 689 U OP2 O N N 690 U "O5'" O N N 691 U "C5'" C N N 692 U "C4'" C N R 693 U "O4'" O N N 694 U "C3'" C N S 695 U "O3'" O N N 696 U "C2'" C N R 697 U "O2'" O N N 698 U "C1'" C N R 699 U N1 N N N 700 U C2 C N N 701 U O2 O N N 702 U N3 N N N 703 U C4 C N N 704 U O4 O N N 705 U C5 C N N 706 U C6 C N N 707 U HOP3 H N N 708 U HOP2 H N N 709 U "H5'" H N N 710 U "H5''" H N N 711 U "H4'" H N N 712 U "H3'" H N N 713 U "HO3'" H N N 714 U "H2'" H N N 715 U "HO2'" H N N 716 U "H1'" H N N 717 U H3 H N N 718 U H5 H N N 719 U H6 H N N 720 VAL N N N N 721 VAL CA C N S 722 VAL C C N N 723 VAL O O N N 724 VAL CB C N N 725 VAL CG1 C N N 726 VAL CG2 C N N 727 VAL OXT O N N 728 VAL H H N N 729 VAL H2 H N N 730 VAL HA H N N 731 VAL HB H N N 732 VAL HG11 H N N 733 VAL HG12 H N N 734 VAL HG13 H N N 735 VAL HG21 H N N 736 VAL HG22 H N N 737 VAL HG23 H N N 738 VAL HXT H N N 739 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 16D N1 C1 sing N N 1 16D N1 HN11 sing N N 2 16D N1 HN12 sing N N 3 16D C1 C2 sing N N 4 16D C1 H11 sing N N 5 16D C1 H12 sing N N 6 16D C2 C3 sing N N 7 16D C2 H21 sing N N 8 16D C2 H22 sing N N 9 16D C3 C4 sing N N 10 16D C3 H31 sing N N 11 16D C3 H32 sing N N 12 16D C4 C5 sing N N 13 16D C4 H41 sing N N 14 16D C4 H42 sing N N 15 16D C5 C6 sing N N 16 16D C5 H51 sing N N 17 16D C5 H52 sing N N 18 16D C6 N2 sing N N 19 16D C6 H61 sing N N 20 16D C6 H62 sing N N 21 16D N2 HN21 sing N N 22 16D N2 HN22 sing N N 23 A OP3 P sing N N 24 A OP3 HOP3 sing N N 25 A P OP1 doub N N 26 A P OP2 sing N N 27 A P "O5'" sing N N 28 A OP2 HOP2 sing N N 29 A "O5'" "C5'" sing N N 30 A "C5'" "C4'" sing N N 31 A "C5'" "H5'" sing N N 32 A "C5'" "H5''" sing N N 33 A "C4'" "O4'" sing N N 34 A "C4'" "C3'" sing N N 35 A "C4'" "H4'" sing N N 36 A "O4'" "C1'" sing N N 37 A "C3'" "O3'" sing N N 38 A "C3'" "C2'" sing N N 39 A "C3'" "H3'" sing N N 40 A "O3'" "HO3'" sing N N 41 A "C2'" "O2'" sing N N 42 A "C2'" "C1'" sing N N 43 A "C2'" "H2'" sing N N 44 A "O2'" "HO2'" sing N N 45 A "C1'" N9 sing N N 46 A "C1'" "H1'" sing N N 47 A N9 C8 sing Y N 48 A N9 C4 sing Y N 49 A C8 N7 doub Y N 50 A C8 H8 sing N N 51 A N7 C5 sing Y N 52 A C5 C6 sing Y N 53 A C5 C4 doub Y N 54 A C6 N6 sing N N 55 A C6 N1 doub Y N 56 A N6 H61 sing N N 57 A N6 H62 sing N N 58 A N1 C2 sing Y N 59 A C2 N3 doub Y N 60 A C2 H2 sing N N 61 A N3 C4 sing Y N 62 ALA N CA sing N N 63 ALA N H sing N N 64 ALA N H2 sing N N 65 ALA CA C sing N N 66 ALA CA CB sing N N 67 ALA CA HA sing N N 68 ALA C O doub N N 69 ALA C OXT sing N N 70 ALA CB HB1 sing N N 71 ALA CB HB2 sing N N 72 ALA CB HB3 sing N N 73 ALA OXT HXT sing N N 74 ARG N CA sing N N 75 ARG N H sing N N 76 ARG N H2 sing N N 77 ARG CA C sing N N 78 ARG CA CB sing N N 79 ARG CA HA sing N N 80 ARG C O doub N N 81 ARG C OXT sing N N 82 ARG CB CG sing N N 83 ARG CB HB2 sing N N 84 ARG CB HB3 sing N N 85 ARG CG CD sing N N 86 ARG CG HG2 sing N N 87 ARG CG HG3 sing N N 88 ARG CD NE sing N N 89 ARG CD HD2 sing N N 90 ARG CD HD3 sing N N 91 ARG NE CZ sing N N 92 ARG NE HE sing N N 93 ARG CZ NH1 sing N N 94 ARG CZ NH2 doub N N 95 ARG NH1 HH11 sing N N 96 ARG NH1 HH12 sing N N 97 ARG NH2 HH21 sing N N 98 ARG NH2 HH22 sing N N 99 ARG OXT HXT sing N N 100 ASN N CA sing N N 101 ASN N H sing N N 102 ASN N H2 sing N N 103 ASN CA C sing N N 104 ASN CA CB sing N N 105 ASN CA HA sing N N 106 ASN C O doub N N 107 ASN C OXT sing N N 108 ASN CB CG sing N N 109 ASN CB HB2 sing N N 110 ASN CB HB3 sing N N 111 ASN CG OD1 doub N N 112 ASN CG ND2 sing N N 113 ASN ND2 HD21 sing N N 114 ASN ND2 HD22 sing N N 115 ASN OXT HXT sing N N 116 ASP N CA sing N N 117 ASP N H sing N N 118 ASP N H2 sing N N 119 ASP CA C sing N N 120 ASP CA CB sing N N 121 ASP CA HA sing N N 122 ASP C O doub N N 123 ASP C OXT sing N N 124 ASP CB CG sing N N 125 ASP CB HB2 sing N N 126 ASP CB HB3 sing N N 127 ASP CG OD1 doub N N 128 ASP CG OD2 sing N N 129 ASP OD2 HD2 sing N N 130 ASP OXT HXT sing N N 131 C OP3 P sing N N 132 C OP3 HOP3 sing N N 133 C P OP1 doub N N 134 C P OP2 sing N N 135 C P "O5'" sing N N 136 C OP2 HOP2 sing N N 137 C "O5'" "C5'" sing N N 138 C "C5'" "C4'" sing N N 139 C "C5'" "H5'" sing N N 140 C "C5'" "H5''" sing N N 141 C "C4'" "O4'" sing N N 142 C "C4'" "C3'" sing N N 143 C "C4'" "H4'" sing N N 144 C "O4'" "C1'" sing N N 145 C "C3'" "O3'" sing N N 146 C "C3'" "C2'" sing N N 147 C "C3'" "H3'" sing N N 148 C "O3'" "HO3'" sing N N 149 C "C2'" "O2'" sing N N 150 C "C2'" "C1'" sing N N 151 C "C2'" "H2'" sing N N 152 C "O2'" "HO2'" sing N N 153 C "C1'" N1 sing N N 154 C "C1'" "H1'" sing N N 155 C N1 C2 sing N N 156 C N1 C6 sing N N 157 C C2 O2 doub N N 158 C C2 N3 sing N N 159 C N3 C4 doub N N 160 C C4 N4 sing N N 161 C C4 C5 sing N N 162 C N4 H41 sing N N 163 C N4 H42 sing N N 164 C C5 C6 doub N N 165 C C5 H5 sing N N 166 C C6 H6 sing N N 167 CYS N CA sing N N 168 CYS N H sing N N 169 CYS N H2 sing N N 170 CYS CA C sing N N 171 CYS CA CB sing N N 172 CYS CA HA sing N N 173 CYS C O doub N N 174 CYS C OXT sing N N 175 CYS CB SG sing N N 176 CYS CB HB2 sing N N 177 CYS CB HB3 sing N N 178 CYS SG HG sing N N 179 CYS OXT HXT sing N N 180 DA OP3 P sing N N 181 DA OP3 HOP3 sing N N 182 DA P OP1 doub N N 183 DA P OP2 sing N N 184 DA P "O5'" sing N N 185 DA OP2 HOP2 sing N N 186 DA "O5'" "C5'" sing N N 187 DA "C5'" "C4'" sing N N 188 DA "C5'" "H5'" sing N N 189 DA "C5'" "H5''" sing N N 190 DA "C4'" "O4'" sing N N 191 DA "C4'" "C3'" sing N N 192 DA "C4'" "H4'" sing N N 193 DA "O4'" "C1'" sing N N 194 DA "C3'" "O3'" sing N N 195 DA "C3'" "C2'" sing N N 196 DA "C3'" "H3'" sing N N 197 DA "O3'" "HO3'" sing N N 198 DA "C2'" "C1'" sing N N 199 DA "C2'" "H2'" sing N N 200 DA "C2'" "H2''" sing N N 201 DA "C1'" N9 sing N N 202 DA "C1'" "H1'" sing N N 203 DA N9 C8 sing Y N 204 DA N9 C4 sing Y N 205 DA C8 N7 doub Y N 206 DA C8 H8 sing N N 207 DA N7 C5 sing Y N 208 DA C5 C6 sing Y N 209 DA C5 C4 doub Y N 210 DA C6 N6 sing N N 211 DA C6 N1 doub Y N 212 DA N6 H61 sing N N 213 DA N6 H62 sing N N 214 DA N1 C2 sing Y N 215 DA C2 N3 doub Y N 216 DA C2 H2 sing N N 217 DA N3 C4 sing Y N 218 DC OP3 P sing N N 219 DC OP3 HOP3 sing N N 220 DC P OP1 doub N N 221 DC P OP2 sing N N 222 DC P "O5'" sing N N 223 DC OP2 HOP2 sing N N 224 DC "O5'" "C5'" sing N N 225 DC "C5'" "C4'" sing N N 226 DC "C5'" "H5'" sing N N 227 DC "C5'" "H5''" sing N N 228 DC "C4'" "O4'" sing N N 229 DC "C4'" "C3'" sing N N 230 DC "C4'" "H4'" sing N N 231 DC "O4'" "C1'" sing N N 232 DC "C3'" "O3'" sing N N 233 DC "C3'" "C2'" sing N N 234 DC "C3'" "H3'" sing N N 235 DC "O3'" "HO3'" sing N N 236 DC "C2'" "C1'" sing N N 237 DC "C2'" "H2'" sing N N 238 DC "C2'" "H2''" sing N N 239 DC "C1'" N1 sing N N 240 DC "C1'" "H1'" sing N N 241 DC N1 C2 sing N N 242 DC N1 C6 sing N N 243 DC C2 O2 doub N N 244 DC C2 N3 sing N N 245 DC N3 C4 doub N N 246 DC C4 N4 sing N N 247 DC C4 C5 sing N N 248 DC N4 H41 sing N N 249 DC N4 H42 sing N N 250 DC C5 C6 doub N N 251 DC C5 H5 sing N N 252 DC C6 H6 sing N N 253 DG OP3 P sing N N 254 DG OP3 HOP3 sing N N 255 DG P OP1 doub N N 256 DG P OP2 sing N N 257 DG P "O5'" sing N N 258 DG OP2 HOP2 sing N N 259 DG "O5'" "C5'" sing N N 260 DG "C5'" "C4'" sing N N 261 DG "C5'" "H5'" sing N N 262 DG "C5'" "H5''" sing N N 263 DG "C4'" "O4'" sing N N 264 DG "C4'" "C3'" sing N N 265 DG "C4'" "H4'" sing N N 266 DG "O4'" "C1'" sing N N 267 DG "C3'" "O3'" sing N N 268 DG "C3'" "C2'" sing N N 269 DG "C3'" "H3'" sing N N 270 DG "O3'" "HO3'" sing N N 271 DG "C2'" "C1'" sing N N 272 DG "C2'" "H2'" sing N N 273 DG "C2'" "H2''" sing N N 274 DG "C1'" N9 sing N N 275 DG "C1'" "H1'" sing N N 276 DG N9 C8 sing Y N 277 DG N9 C4 sing Y N 278 DG C8 N7 doub Y N 279 DG C8 H8 sing N N 280 DG N7 C5 sing Y N 281 DG C5 C6 sing N N 282 DG C5 C4 doub Y N 283 DG C6 O6 doub N N 284 DG C6 N1 sing N N 285 DG N1 C2 sing N N 286 DG N1 H1 sing N N 287 DG C2 N2 sing N N 288 DG C2 N3 doub N N 289 DG N2 H21 sing N N 290 DG N2 H22 sing N N 291 DG N3 C4 sing N N 292 DT OP3 P sing N N 293 DT OP3 HOP3 sing N N 294 DT P OP1 doub N N 295 DT P OP2 sing N N 296 DT P "O5'" sing N N 297 DT OP2 HOP2 sing N N 298 DT "O5'" "C5'" sing N N 299 DT "C5'" "C4'" sing N N 300 DT "C5'" "H5'" sing N N 301 DT "C5'" "H5''" sing N N 302 DT "C4'" "O4'" sing N N 303 DT "C4'" "C3'" sing N N 304 DT "C4'" "H4'" sing N N 305 DT "O4'" "C1'" sing N N 306 DT "C3'" "O3'" sing N N 307 DT "C3'" "C2'" sing N N 308 DT "C3'" "H3'" sing N N 309 DT "O3'" "HO3'" sing N N 310 DT "C2'" "C1'" sing N N 311 DT "C2'" "H2'" sing N N 312 DT "C2'" "H2''" sing N N 313 DT "C1'" N1 sing N N 314 DT "C1'" "H1'" sing N N 315 DT N1 C2 sing N N 316 DT N1 C6 sing N N 317 DT C2 O2 doub N N 318 DT C2 N3 sing N N 319 DT N3 C4 sing N N 320 DT N3 H3 sing N N 321 DT C4 O4 doub N N 322 DT C4 C5 sing N N 323 DT C5 C7 sing N N 324 DT C5 C6 doub N N 325 DT C7 H71 sing N N 326 DT C7 H72 sing N N 327 DT C7 H73 sing N N 328 DT C6 H6 sing N N 329 FLC CAC CA sing N N 330 FLC CAC OA1 doub N N 331 FLC CAC OA2 sing N N 332 FLC CA CB sing N N 333 FLC CA HA1 sing N N 334 FLC CA HA2 sing N N 335 FLC CB CBC sing N N 336 FLC CB CG sing N N 337 FLC CB OHB sing N N 338 FLC CBC OB1 doub N N 339 FLC CBC OB2 sing N N 340 FLC CG CGC sing N N 341 FLC CG HG1 sing N N 342 FLC CG HG2 sing N N 343 FLC CGC OG1 doub N N 344 FLC CGC OG2 sing N N 345 FLC OHB HOB sing N N 346 G OP3 P sing N N 347 G OP3 HOP3 sing N N 348 G P OP1 doub N N 349 G P OP2 sing N N 350 G P "O5'" sing N N 351 G OP2 HOP2 sing N N 352 G "O5'" "C5'" sing N N 353 G "C5'" "C4'" sing N N 354 G "C5'" "H5'" sing N N 355 G "C5'" "H5''" sing N N 356 G "C4'" "O4'" sing N N 357 G "C4'" "C3'" sing N N 358 G "C4'" "H4'" sing N N 359 G "O4'" "C1'" sing N N 360 G "C3'" "O3'" sing N N 361 G "C3'" "C2'" sing N N 362 G "C3'" "H3'" sing N N 363 G "O3'" "HO3'" sing N N 364 G "C2'" "O2'" sing N N 365 G "C2'" "C1'" sing N N 366 G "C2'" "H2'" sing N N 367 G "O2'" "HO2'" sing N N 368 G "C1'" N9 sing N N 369 G "C1'" "H1'" sing N N 370 G N9 C8 sing Y N 371 G N9 C4 sing Y N 372 G C8 N7 doub Y N 373 G C8 H8 sing N N 374 G N7 C5 sing Y N 375 G C5 C6 sing N N 376 G C5 C4 doub Y N 377 G C6 O6 doub N N 378 G C6 N1 sing N N 379 G N1 C2 sing N N 380 G N1 H1 sing N N 381 G C2 N2 sing N N 382 G C2 N3 doub N N 383 G N2 H21 sing N N 384 G N2 H22 sing N N 385 G N3 C4 sing N N 386 GLN N CA sing N N 387 GLN N H sing N N 388 GLN N H2 sing N N 389 GLN CA C sing N N 390 GLN CA CB sing N N 391 GLN CA HA sing N N 392 GLN C O doub N N 393 GLN C OXT sing N N 394 GLN CB CG sing N N 395 GLN CB HB2 sing N N 396 GLN CB HB3 sing N N 397 GLN CG CD sing N N 398 GLN CG HG2 sing N N 399 GLN CG HG3 sing N N 400 GLN CD OE1 doub N N 401 GLN CD NE2 sing N N 402 GLN NE2 HE21 sing N N 403 GLN NE2 HE22 sing N N 404 GLN OXT HXT sing N N 405 GLU N CA sing N N 406 GLU N H sing N N 407 GLU N H2 sing N N 408 GLU CA C sing N N 409 GLU CA CB sing N N 410 GLU CA HA sing N N 411 GLU C O doub N N 412 GLU C OXT sing N N 413 GLU CB CG sing N N 414 GLU CB HB2 sing N N 415 GLU CB HB3 sing N N 416 GLU CG CD sing N N 417 GLU CG HG2 sing N N 418 GLU CG HG3 sing N N 419 GLU CD OE1 doub N N 420 GLU CD OE2 sing N N 421 GLU OE2 HE2 sing N N 422 GLU OXT HXT sing N N 423 GLY N CA sing N N 424 GLY N H sing N N 425 GLY N H2 sing N N 426 GLY CA C sing N N 427 GLY CA HA2 sing N N 428 GLY CA HA3 sing N N 429 GLY C O doub N N 430 GLY C OXT sing N N 431 GLY OXT HXT sing N N 432 GOL C1 O1 sing N N 433 GOL C1 C2 sing N N 434 GOL C1 H11 sing N N 435 GOL C1 H12 sing N N 436 GOL O1 HO1 sing N N 437 GOL C2 O2 sing N N 438 GOL C2 C3 sing N N 439 GOL C2 H2 sing N N 440 GOL O2 HO2 sing N N 441 GOL C3 O3 sing N N 442 GOL C3 H31 sing N N 443 GOL C3 H32 sing N N 444 GOL O3 HO3 sing N N 445 HIS N CA sing N N 446 HIS N H sing N N 447 HIS N H2 sing N N 448 HIS CA C sing N N 449 HIS CA CB sing N N 450 HIS CA HA sing N N 451 HIS C O doub N N 452 HIS C OXT sing N N 453 HIS CB CG sing N N 454 HIS CB HB2 sing N N 455 HIS CB HB3 sing N N 456 HIS CG ND1 sing Y N 457 HIS CG CD2 doub Y N 458 HIS ND1 CE1 doub Y N 459 HIS ND1 HD1 sing N N 460 HIS CD2 NE2 sing Y N 461 HIS CD2 HD2 sing N N 462 HIS CE1 NE2 sing Y N 463 HIS CE1 HE1 sing N N 464 HIS NE2 HE2 sing N N 465 HIS OXT HXT sing N N 466 HOH O H1 sing N N 467 HOH O H2 sing N N 468 ILE N CA sing N N 469 ILE N H sing N N 470 ILE N H2 sing N N 471 ILE CA C sing N N 472 ILE CA CB sing N N 473 ILE CA HA sing N N 474 ILE C O doub N N 475 ILE C OXT sing N N 476 ILE CB CG1 sing N N 477 ILE CB CG2 sing N N 478 ILE CB HB sing N N 479 ILE CG1 CD1 sing N N 480 ILE CG1 HG12 sing N N 481 ILE CG1 HG13 sing N N 482 ILE CG2 HG21 sing N N 483 ILE CG2 HG22 sing N N 484 ILE CG2 HG23 sing N N 485 ILE CD1 HD11 sing N N 486 ILE CD1 HD12 sing N N 487 ILE CD1 HD13 sing N N 488 ILE OXT HXT sing N N 489 LEU N CA sing N N 490 LEU N H sing N N 491 LEU N H2 sing N N 492 LEU CA C sing N N 493 LEU CA CB sing N N 494 LEU CA HA sing N N 495 LEU C O doub N N 496 LEU C OXT sing N N 497 LEU CB CG sing N N 498 LEU CB HB2 sing N N 499 LEU CB HB3 sing N N 500 LEU CG CD1 sing N N 501 LEU CG CD2 sing N N 502 LEU CG HG sing N N 503 LEU CD1 HD11 sing N N 504 LEU CD1 HD12 sing N N 505 LEU CD1 HD13 sing N N 506 LEU CD2 HD21 sing N N 507 LEU CD2 HD22 sing N N 508 LEU CD2 HD23 sing N N 509 LEU OXT HXT sing N N 510 LYS N CA sing N N 511 LYS N H sing N N 512 LYS N H2 sing N N 513 LYS CA C sing N N 514 LYS CA CB sing N N 515 LYS CA HA sing N N 516 LYS C O doub N N 517 LYS C OXT sing N N 518 LYS CB CG sing N N 519 LYS CB HB2 sing N N 520 LYS CB HB3 sing N N 521 LYS CG CD sing N N 522 LYS CG HG2 sing N N 523 LYS CG HG3 sing N N 524 LYS CD CE sing N N 525 LYS CD HD2 sing N N 526 LYS CD HD3 sing N N 527 LYS CE NZ sing N N 528 LYS CE HE2 sing N N 529 LYS CE HE3 sing N N 530 LYS NZ HZ1 sing N N 531 LYS NZ HZ2 sing N N 532 LYS NZ HZ3 sing N N 533 LYS OXT HXT sing N N 534 MET N CA sing N N 535 MET N H sing N N 536 MET N H2 sing N N 537 MET CA C sing N N 538 MET CA CB sing N N 539 MET CA HA sing N N 540 MET C O doub N N 541 MET C OXT sing N N 542 MET CB CG sing N N 543 MET CB HB2 sing N N 544 MET CB HB3 sing N N 545 MET CG SD sing N N 546 MET CG HG2 sing N N 547 MET CG HG3 sing N N 548 MET SD CE sing N N 549 MET CE HE1 sing N N 550 MET CE HE2 sing N N 551 MET CE HE3 sing N N 552 MET OXT HXT sing N N 553 PHE N CA sing N N 554 PHE N H sing N N 555 PHE N H2 sing N N 556 PHE CA C sing N N 557 PHE CA CB sing N N 558 PHE CA HA sing N N 559 PHE C O doub N N 560 PHE C OXT sing N N 561 PHE CB CG sing N N 562 PHE CB HB2 sing N N 563 PHE CB HB3 sing N N 564 PHE CG CD1 doub Y N 565 PHE CG CD2 sing Y N 566 PHE CD1 CE1 sing Y N 567 PHE CD1 HD1 sing N N 568 PHE CD2 CE2 doub Y N 569 PHE CD2 HD2 sing N N 570 PHE CE1 CZ doub Y N 571 PHE CE1 HE1 sing N N 572 PHE CE2 CZ sing Y N 573 PHE CE2 HE2 sing N N 574 PHE CZ HZ sing N N 575 PHE OXT HXT sing N N 576 PRO N CA sing N N 577 PRO N CD sing N N 578 PRO N H sing N N 579 PRO CA C sing N N 580 PRO CA CB sing N N 581 PRO CA HA sing N N 582 PRO C O doub N N 583 PRO C OXT sing N N 584 PRO CB CG sing N N 585 PRO CB HB2 sing N N 586 PRO CB HB3 sing N N 587 PRO CG CD sing N N 588 PRO CG HG2 sing N N 589 PRO CG HG3 sing N N 590 PRO CD HD2 sing N N 591 PRO CD HD3 sing N N 592 PRO OXT HXT sing N N 593 SER N CA sing N N 594 SER N H sing N N 595 SER N H2 sing N N 596 SER CA C sing N N 597 SER CA CB sing N N 598 SER CA HA sing N N 599 SER C O doub N N 600 SER C OXT sing N N 601 SER CB OG sing N N 602 SER CB HB2 sing N N 603 SER CB HB3 sing N N 604 SER OG HG sing N N 605 SER OXT HXT sing N N 606 SO4 S O1 doub N N 607 SO4 S O2 doub N N 608 SO4 S O3 sing N N 609 SO4 S O4 sing N N 610 THR N CA sing N N 611 THR N H sing N N 612 THR N H2 sing N N 613 THR CA C sing N N 614 THR CA CB sing N N 615 THR CA HA sing N N 616 THR C O doub N N 617 THR C OXT sing N N 618 THR CB OG1 sing N N 619 THR CB CG2 sing N N 620 THR CB HB sing N N 621 THR OG1 HG1 sing N N 622 THR CG2 HG21 sing N N 623 THR CG2 HG22 sing N N 624 THR CG2 HG23 sing N N 625 THR OXT HXT sing N N 626 TRP N CA sing N N 627 TRP N H sing N N 628 TRP N H2 sing N N 629 TRP CA C sing N N 630 TRP CA CB sing N N 631 TRP CA HA sing N N 632 TRP C O doub N N 633 TRP C OXT sing N N 634 TRP CB CG sing N N 635 TRP CB HB2 sing N N 636 TRP CB HB3 sing N N 637 TRP CG CD1 doub Y N 638 TRP CG CD2 sing Y N 639 TRP CD1 NE1 sing Y N 640 TRP CD1 HD1 sing N N 641 TRP CD2 CE2 doub Y N 642 TRP CD2 CE3 sing Y N 643 TRP NE1 CE2 sing Y N 644 TRP NE1 HE1 sing N N 645 TRP CE2 CZ2 sing Y N 646 TRP CE3 CZ3 doub Y N 647 TRP CE3 HE3 sing N N 648 TRP CZ2 CH2 doub Y N 649 TRP CZ2 HZ2 sing N N 650 TRP CZ3 CH2 sing Y N 651 TRP CZ3 HZ3 sing N N 652 TRP CH2 HH2 sing N N 653 TRP OXT HXT sing N N 654 TYR N CA sing N N 655 TYR N H sing N N 656 TYR N H2 sing N N 657 TYR CA C sing N N 658 TYR CA CB sing N N 659 TYR CA HA sing N N 660 TYR C O doub N N 661 TYR C OXT sing N N 662 TYR CB CG sing N N 663 TYR CB HB2 sing N N 664 TYR CB HB3 sing N N 665 TYR CG CD1 doub Y N 666 TYR CG CD2 sing Y N 667 TYR CD1 CE1 sing Y N 668 TYR CD1 HD1 sing N N 669 TYR CD2 CE2 doub Y N 670 TYR CD2 HD2 sing N N 671 TYR CE1 CZ doub Y N 672 TYR CE1 HE1 sing N N 673 TYR CE2 CZ sing Y N 674 TYR CE2 HE2 sing N N 675 TYR CZ OH sing N N 676 TYR OH HH sing N N 677 TYR OXT HXT sing N N 678 U OP3 P sing N N 679 U OP3 HOP3 sing N N 680 U P OP1 doub N N 681 U P OP2 sing N N 682 U P "O5'" sing N N 683 U OP2 HOP2 sing N N 684 U "O5'" "C5'" sing N N 685 U "C5'" "C4'" sing N N 686 U "C5'" "H5'" sing N N 687 U "C5'" "H5''" sing N N 688 U "C4'" "O4'" sing N N 689 U "C4'" "C3'" sing N N 690 U "C4'" "H4'" sing N N 691 U "O4'" "C1'" sing N N 692 U "C3'" "O3'" sing N N 693 U "C3'" "C2'" sing N N 694 U "C3'" "H3'" sing N N 695 U "O3'" "HO3'" sing N N 696 U "C2'" "O2'" sing N N 697 U "C2'" "C1'" sing N N 698 U "C2'" "H2'" sing N N 699 U "O2'" "HO2'" sing N N 700 U "C1'" N1 sing N N 701 U "C1'" "H1'" sing N N 702 U N1 C2 sing N N 703 U N1 C6 sing N N 704 U C2 O2 doub N N 705 U C2 N3 sing N N 706 U N3 C4 sing N N 707 U N3 H3 sing N N 708 U C4 O4 doub N N 709 U C4 C5 sing N N 710 U C5 C6 doub N N 711 U C5 H5 sing N N 712 U C6 H6 sing N N 713 VAL N CA sing N N 714 VAL N H sing N N 715 VAL N H2 sing N N 716 VAL CA C sing N N 717 VAL CA CB sing N N 718 VAL CA HA sing N N 719 VAL C O doub N N 720 VAL C OXT sing N N 721 VAL CB CG1 sing N N 722 VAL CB CG2 sing N N 723 VAL CB HB sing N N 724 VAL CG1 HG11 sing N N 725 VAL CG1 HG12 sing N N 726 VAL CG1 HG13 sing N N 727 VAL CG2 HG21 sing N N 728 VAL CG2 HG22 sing N N 729 VAL CG2 HG23 sing N N 730 VAL OXT HXT sing N N 731 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2QK9 'double helix' 2QK9 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A A 1 1_555 B DT 18 1_555 -0.201 -0.360 0.300 -4.958 -14.446 -2.306 1 B_A1:DT36_C B 1 ? C 36 ? 20 1 1 A G 2 1_555 B DC 17 1_555 -0.348 -0.256 0.241 -12.729 -18.242 4.378 2 B_G2:DC35_C B 2 ? C 35 ? 19 1 1 A U 3 1_555 B DA 16 1_555 -0.293 -0.118 0.491 -18.963 -10.637 -4.647 3 B_U3:DA34_C B 3 ? C 34 ? 20 1 1 A G 4 1_555 B DC 15 1_555 -0.014 -0.274 -0.139 -13.884 -11.043 -2.833 4 B_G4:DC33_C B 4 ? C 33 ? 19 1 1 A C 5 1_555 B DG 14 1_555 0.146 -0.183 0.225 -17.228 -11.571 -0.472 5 B_C5:DG32_C B 5 ? C 32 ? 19 1 1 A G 6 1_555 B DC 13 1_555 -0.149 -0.231 -0.267 -20.973 -17.510 0.330 6 B_G6:DC31_C B 6 ? C 31 ? 19 1 1 A A 7 1_555 B DT 12 1_555 0.241 -0.155 0.026 -14.226 -5.841 -0.156 7 B_A7:DT30_C B 7 ? C 30 ? 20 1 1 A C 8 1_555 B DG 11 1_555 -0.174 -0.220 -0.284 2.019 -14.946 -1.658 8 B_C8:DG29_C B 8 ? C 29 ? 19 1 1 A A 9 1_555 B DT 10 1_555 0.054 -0.142 -0.246 -11.733 -5.509 -2.480 9 B_A9:DT28_C B 9 ? C 28 ? 20 1 1 A C 10 1_555 B DG 9 1_555 0.254 -0.099 0.243 -0.335 -8.306 -1.322 10 B_C10:DG27_C B 10 ? C 27 ? 19 1 1 A C 11 1_555 B DG 8 1_555 -0.202 -0.214 0.080 3.742 -11.188 1.036 11 B_C11:DG26_C B 11 ? C 26 ? 19 1 1 A U 12 1_555 B DA 7 1_555 -0.433 -0.134 0.223 -3.725 -9.690 3.021 12 B_U12:DA25_C B 12 ? C 25 ? 20 1 1 A G 13 1_555 B DC 6 1_555 -0.073 -0.250 0.107 1.434 -4.145 0.737 13 B_G13:DC24_C B 13 ? C 24 ? 19 1 1 A A 14 1_555 B DT 5 1_555 -0.251 -0.156 -0.096 1.801 -12.825 2.493 14 B_A14:DT23_C B 14 ? C 23 ? 20 1 1 A U 15 1_555 B DA 4 1_555 0.040 0.038 -0.001 5.699 -7.057 -1.493 15 B_U15:DA22_C B 15 ? C 22 ? 20 1 1 A U 16 1_555 B DA 3 1_555 0.171 -0.072 -0.128 10.173 -1.691 0.154 16 B_U16:DA21_C B 16 ? C 21 ? 20 1 1 A C 17 1_555 B DG 2 1_555 0.073 -0.244 -0.328 9.293 -11.740 2.246 17 B_C17:DG20_C B 17 ? C 20 ? 19 1 1 A C 18 1_555 B DG 1 1_555 0.096 -0.236 -0.398 5.336 0.999 -0.432 18 B_C18:DG19_C B 18 ? C 19 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A A 1 1_555 B DT 18 1_555 A G 2 1_555 B DC 17 1_555 -0.057 -0.701 3.336 -0.713 2.315 38.511 -1.350 -0.002 3.290 3.505 1.079 38.584 1 BB_A1G2:DC35DT36_CC B 1 ? C 36 ? B 2 ? C 35 ? 1 A G 2 1_555 B DC 17 1_555 A U 3 1_555 B DA 16 1_555 0.215 -0.949 3.369 1.119 2.882 34.881 -2.019 -0.186 3.288 4.796 -1.863 35.014 2 BB_G2U3:DA34DC35_CC B 2 ? C 35 ? B 3 ? C 34 ? 1 A U 3 1_555 B DA 16 1_555 A G 4 1_555 B DC 15 1_555 0.627 -1.101 3.174 4.897 10.691 32.747 -3.373 -0.350 2.753 18.246 -8.358 34.740 3 BB_U3G4:DC33DA34_CC B 3 ? C 34 ? B 4 ? C 33 ? 1 A G 4 1_555 B DC 15 1_555 A C 5 1_555 B DG 14 1_555 0.359 -1.508 3.369 1.918 2.418 31.653 -3.202 -0.299 3.263 4.419 -3.505 31.799 4 BB_G4C5:DG32DC33_CC B 4 ? C 33 ? B 5 ? C 32 ? 1 A C 5 1_555 B DG 14 1_555 A G 6 1_555 B DC 13 1_555 0.433 -1.217 3.488 4.981 10.795 33.669 -3.589 0.031 3.001 17.955 -8.286 35.649 5 BB_C5G6:DC31DG32_CC B 5 ? C 32 ? B 6 ? C 31 ? 1 A G 6 1_555 B DC 13 1_555 A A 7 1_555 B DT 12 1_555 0.378 -0.800 3.198 1.927 4.708 32.245 -2.211 -0.350 3.071 8.411 -3.442 32.634 6 BB_G6A7:DT30DC31_CC B 6 ? C 31 ? B 7 ? C 30 ? 1 A A 7 1_555 B DT 12 1_555 A C 8 1_555 B DG 11 1_555 -0.722 -0.613 3.090 2.045 12.336 20.130 -5.125 2.362 2.256 31.651 -5.248 23.664 7 BB_A7C8:DG29DT30_CC B 7 ? C 30 ? B 8 ? C 29 ? 1 A C 8 1_555 B DG 11 1_555 A A 9 1_555 B DT 10 1_555 0.718 -1.589 3.670 3.030 6.299 30.587 -4.226 -0.709 3.338 11.749 -5.652 31.357 8 BB_C8A9:DT28DG29_CC B 8 ? C 29 ? B 9 ? C 28 ? 1 A A 9 1_555 B DT 10 1_555 A C 10 1_555 B DG 9 1_555 0.272 -1.515 3.055 -3.269 -2.317 34.337 -2.212 -0.935 3.109 -3.909 5.514 34.563 9 BB_A9C10:DG27DT28_CC B 9 ? C 28 ? B 10 ? C 27 ? 1 A C 10 1_555 B DG 9 1_555 A C 11 1_555 B DG 8 1_555 1.002 -2.593 3.083 5.047 4.497 22.902 -7.594 -0.937 2.688 11.020 -12.369 23.866 10 BB_C10C11:DG26DG27_CC B 10 ? C 27 ? B 11 ? C 26 ? 1 A C 11 1_555 B DG 8 1_555 A U 12 1_555 B DA 7 1_555 -0.482 -1.308 3.401 -2.253 7.120 32.033 -3.533 0.466 3.073 12.688 4.015 32.870 11 BB_C11U12:DA25DG26_CC B 11 ? C 26 ? B 12 ? C 25 ? 1 A U 12 1_555 B DA 7 1_555 A G 13 1_555 B DC 6 1_555 0.124 -1.415 3.025 -0.104 7.482 34.615 -3.297 -0.218 2.671 12.395 0.172 35.391 12 BB_U12G13:DC24DA25_CC B 12 ? C 25 ? B 13 ? C 24 ? 1 A G 13 1_555 B DC 6 1_555 A A 14 1_555 B DT 5 1_555 0.142 -1.480 3.276 1.198 7.309 30.135 -4.106 -0.046 2.850 13.798 -2.262 31.011 13 BB_G13A14:DT23DC24_CC B 13 ? C 24 ? B 14 ? C 23 ? 1 A A 14 1_555 B DT 5 1_555 A U 15 1_555 B DA 4 1_555 -0.147 -1.689 3.234 -1.756 3.908 33.937 -3.466 -0.016 3.030 6.661 2.994 34.198 14 BB_A14U15:DA22DT23_CC B 14 ? C 23 ? B 15 ? C 22 ? 1 A U 15 1_555 B DA 4 1_555 A U 16 1_555 B DA 3 1_555 -0.799 -2.042 3.154 -0.918 7.282 25.399 -6.179 1.533 2.508 16.137 2.034 26.421 15 BB_U15U16:DA21DA22_CC B 15 ? C 22 ? B 16 ? C 21 ? 1 A U 16 1_555 B DA 3 1_555 A C 17 1_555 B DG 2 1_555 1.232 -1.539 3.120 3.307 12.239 34.648 -3.925 -1.547 2.553 19.750 -5.337 36.828 16 BB_U16C17:DG20DA21_CC B 16 ? C 21 ? B 17 ? C 20 ? 1 A C 17 1_555 B DG 2 1_555 A C 18 1_555 B DG 1 1_555 -0.244 -2.185 3.486 1.579 4.107 32.807 -4.546 0.701 3.182 7.231 -2.779 33.092 17 BB_C17C18:DG19DG20_CC B 17 ? C 20 ? B 18 ? C 19 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Original low resolution strcture solved with the same crystal and SeMet SIRAS' # _atom_sites.entry_id 2QK9 _atom_sites.fract_transf_matrix[1][1] 0.006306 _atom_sites.fract_transf_matrix[1][2] 0.003641 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007282 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007040 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_