HEADER PEPTIDE BINDING PROTEIN 11-JUL-07 2QKV TITLE CRYSTAL STRUCTURE OF THE C645S MUTANT OF THE 5TH PDZ DOMAIN OF INAD COMPND MOL_ID: 1; COMPND 2 MOLECULE: INACTIVATION-NO-AFTER-POTENTIAL D PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: 5TH PDZ DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: INAD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-5X-3 KEYWDS PDZ DOMAIN, SCAFFOLDING PROTEIN, MEMBRANE, SENSORY TRANSDUCTION, KEYWDS 2 VISION, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.RANGANATHAN,M.SOCOLICH REVDAT 4 21-FEB-24 2QKV 1 REMARK REVDAT 3 20-OCT-21 2QKV 1 SEQADV REVDAT 2 24-FEB-09 2QKV 1 VERSN REVDAT 1 06-NOV-07 2QKV 0 JRNL AUTH P.MISHRA,M.SOCOLICH,M.A.WALL,J.GRAVES,Z.WANG,R.RANGANATHAN JRNL TITL DYNAMIC SCAFFOLDING IN A G PROTEIN-COUPLED SIGNALING SYSTEM. JRNL REF CELL(CAMBRIDGE,MASS.) V. 131 80 2007 JRNL REFN ISSN 0092-8674 JRNL PMID 17923089 JRNL DOI 10.1016/J.CELL.2007.07.037 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 0.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 33401 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3324 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1404 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 143 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 2QKV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000043725. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAY-02; 23-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALS; APS REMARK 200 BEAMLINE : 8.2.1; 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 0.97940 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : DOUBLE CRYSTAL, SI(111); NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; SBC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36464 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 51.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.50400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3M NA CITRATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 56.02000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.02000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.02000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.02000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 56.02000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.02000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 56.02000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 56.02000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 56.02000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 56.02000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 56.02000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 56.02000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 56.02000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 56.02000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 56.02000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 56.02000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 56.02000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 56.02000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 28.01000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 84.03000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 84.03000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 28.01000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 28.01000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 28.01000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 84.03000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 84.03000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 28.01000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 84.03000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 28.01000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 84.03000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 28.01000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 84.03000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 84.03000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 84.03000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 28.01000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 84.03000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 28.01000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 28.01000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 28.01000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 84.03000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 84.03000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 28.01000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 28.01000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 84.03000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 84.03000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 84.03000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 84.03000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 28.01000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 84.03000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 28.01000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 84.03000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 28.01000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 28.01000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 28.01000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12680 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 56.02000 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 56.02000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -56.02000 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 56.02000 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 28.01000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 84.03000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -28.01000 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 28.01000 REMARK 350 BIOMT2 5 0.000000 0.000000 1.000000 84.03000 REMARK 350 BIOMT3 5 0.000000 -1.000000 0.000000 -28.01000 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 28.01000 REMARK 350 BIOMT2 6 0.000000 1.000000 0.000000 84.03000 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 -28.01000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 666 REMARK 465 ALA A 667 REMARK 465 ALA A 668 REMARK 465 SER A 669 REMARK 465 ALA B 666 REMARK 465 ALA B 667 REMARK 465 ALA B 668 REMARK 465 SER B 669 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 593 OH TYR B 616 2.10 REMARK 500 NH2 ARG B 577 O HOH B 64 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE B 575 -74.23 -11.10 REMARK 500 SER B 579 -81.89 -14.00 REMARK 500 LEU B 580 92.44 84.69 REMARK 500 ALA B 591 139.63 -28.44 REMARK 500 ILE B 612 102.98 -46.19 REMARK 500 GLN B 613 79.69 6.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 616 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QKT RELATED DB: PDB REMARK 900 RELATED ID: 2QKU RELATED DB: PDB DBREF 2QKV A 580 665 UNP Q24008 INAD_DROME 580 665 DBREF 2QKV B 580 665 UNP Q24008 INAD_DROME 580 665 SEQADV 2QKV GLY A 574 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ILE A 575 UNP Q24008 EXPRESSION TAG SEQADV 2QKV PRO A 576 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ARG A 577 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ASN A 578 UNP Q24008 EXPRESSION TAG SEQADV 2QKV SER A 579 UNP Q24008 EXPRESSION TAG SEQADV 2QKV SER A 645 UNP Q24008 CYS 645 ENGINEERED MUTATION SEQADV 2QKV ALA A 666 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ALA A 667 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ALA A 668 UNP Q24008 EXPRESSION TAG SEQADV 2QKV SER A 669 UNP Q24008 EXPRESSION TAG SEQADV 2QKV GLY B 574 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ILE B 575 UNP Q24008 EXPRESSION TAG SEQADV 2QKV PRO B 576 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ARG B 577 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ASN B 578 UNP Q24008 EXPRESSION TAG SEQADV 2QKV SER B 579 UNP Q24008 EXPRESSION TAG SEQADV 2QKV SER B 645 UNP Q24008 CYS 645 ENGINEERED MUTATION SEQADV 2QKV ALA B 666 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ALA B 667 UNP Q24008 EXPRESSION TAG SEQADV 2QKV ALA B 668 UNP Q24008 EXPRESSION TAG SEQADV 2QKV SER B 669 UNP Q24008 EXPRESSION TAG SEQRES 1 A 96 GLY ILE PRO ARG ASN SER LEU GLU LYS PHE ASN VAL ASP SEQRES 2 A 96 LEU MET LYS LYS ALA GLY LYS GLU LEU GLY LEU SER LEU SEQRES 3 A 96 SER PRO ASN GLU ILE GLY CYS THR ILE ALA ASP LEU ILE SEQRES 4 A 96 GLN GLY GLN TYR PRO GLU ILE ASP SER LYS LEU GLN ARG SEQRES 5 A 96 GLY ASP ILE ILE THR LYS PHE ASN GLY ASP ALA LEU GLU SEQRES 6 A 96 GLY LEU PRO PHE GLN VAL SER TYR ALA LEU PHE LYS GLY SEQRES 7 A 96 ALA ASN GLY LYS VAL SER MET GLU VAL THR ARG PRO LYS SEQRES 8 A 96 PRO ALA ALA ALA SER SEQRES 1 B 96 GLY ILE PRO ARG ASN SER LEU GLU LYS PHE ASN VAL ASP SEQRES 2 B 96 LEU MET LYS LYS ALA GLY LYS GLU LEU GLY LEU SER LEU SEQRES 3 B 96 SER PRO ASN GLU ILE GLY CYS THR ILE ALA ASP LEU ILE SEQRES 4 B 96 GLN GLY GLN TYR PRO GLU ILE ASP SER LYS LEU GLN ARG SEQRES 5 B 96 GLY ASP ILE ILE THR LYS PHE ASN GLY ASP ALA LEU GLU SEQRES 6 B 96 GLY LEU PRO PHE GLN VAL SER TYR ALA LEU PHE LYS GLY SEQRES 7 B 96 ALA ASN GLY LYS VAL SER MET GLU VAL THR ARG PRO LYS SEQRES 8 B 96 PRO ALA ALA ALA SER FORMUL 3 HOH *143(H2 O) HELIX 1 1 TYR A 616 LEU A 623 1 8 HELIX 2 2 PRO A 641 GLY A 651 1 11 HELIX 3 3 TYR B 616 LEU B 623 1 8 HELIX 4 4 PRO B 641 GLY B 651 1 11 SHEET 1 A 5 PHE A 583 MET A 588 0 SHEET 2 A 5 LYS A 655 THR A 661 -1 O MET A 658 N VAL A 585 SHEET 3 A 5 ILE A 628 PHE A 632 -1 N ILE A 628 O THR A 661 SHEET 4 A 5 CYS A 606 LEU A 611 -1 N CYS A 606 O ILE A 629 SHEET 5 A 5 LEU A 597 PRO A 601 -1 N SER A 600 O THR A 607 SHEET 1 B 4 PHE A 583 MET A 588 0 SHEET 2 B 4 LYS A 655 THR A 661 -1 O MET A 658 N VAL A 585 SHEET 3 B 4 ILE A 628 PHE A 632 -1 N ILE A 628 O THR A 661 SHEET 4 B 4 ASP A 635 ALA A 636 -1 O ASP A 635 N PHE A 632 SHEET 1 C 5 LYS B 582 LYS B 589 0 SHEET 2 C 5 GLY B 654 THR B 661 -1 O VAL B 656 N LEU B 587 SHEET 3 C 5 ILE B 628 PHE B 632 -1 N ILE B 628 O THR B 661 SHEET 4 C 5 GLY B 605 LEU B 611 -1 N CYS B 606 O ILE B 629 SHEET 5 C 5 LEU B 597 ASN B 602 -1 N SER B 600 O THR B 607 SHEET 1 D 4 LYS B 582 LYS B 589 0 SHEET 2 D 4 GLY B 654 THR B 661 -1 O VAL B 656 N LEU B 587 SHEET 3 D 4 ILE B 628 PHE B 632 -1 N ILE B 628 O THR B 661 SHEET 4 D 4 ASP B 635 ALA B 636 -1 O ASP B 635 N PHE B 632 CRYST1 112.040 112.040 112.040 90.00 90.00 90.00 P 43 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008925 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008925 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008925 0.00000