HEADER OXIDOREDUCTASE 26-JUL-07 2QQ5 TITLE CRYSTAL STRUCTURE OF HUMAN SDR FAMILY MEMBER 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 3-262; COMPND 5 SYNONYM: DHRS1; COMPND 6 EC: 1.1.-.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DHRS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P11 KEYWDS DHRS1, SDR, DEHYDROGENASE, REDUCTASE, SHORT-CHAIN, STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM, SGC, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.S.PILKA,V.HOZJAN,E.UGOCHUKWU,F.VON DELFT,M.SUNDSTROM, AUTHOR 2 C.H.ARROWSMITH,J.WEIGELT,A.EDWARDS,U.OPPERMANN,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 6 30-OCT-24 2QQ5 1 REMARK REVDAT 5 30-AUG-23 2QQ5 1 REMARK REVDAT 4 13-JUL-11 2QQ5 1 VERSN REVDAT 3 24-FEB-09 2QQ5 1 VERSN REVDAT 2 21-AUG-07 2QQ5 1 REMARK REVDAT 1 07-AUG-07 2QQ5 0 JRNL AUTH E.S.PILKA,V.HOZJAN,E.UGOCHUKWU,F.VON DELFT,M.SUNDSTROM, JRNL AUTH 2 C.H.ARROWSMITH,J.WEIGELT,A.EDWARDS,U.OPPERMANN JRNL TITL CRYSTAL STRUCTURE OF HUMAN SDR FAMILY MEMBER 1. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0037 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 22214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1203 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1614 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.2460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1748 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 201 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : -1.29000 REMARK 3 B33 (A**2) : 0.92000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.406 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1777 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1156 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2416 ; 1.213 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2825 ; 0.918 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 236 ; 5.596 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 69 ;32.662 ;23.913 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 277 ;10.488 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;14.306 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 285 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2015 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 346 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 364 ; 0.235 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1180 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 915 ; 0.173 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 855 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 133 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.170 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 56 ; 0.248 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.130 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1204 ; 2.318 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 489 ; 0.710 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1876 ; 3.306 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 650 ; 4.712 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 540 ; 6.621 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 262 REMARK 3 ORIGIN FOR THE GROUP (A): 20.6303 29.9874 34.7302 REMARK 3 T TENSOR REMARK 3 T11: -0.0302 T22: -0.0431 REMARK 3 T33: -0.0434 T12: -0.0097 REMARK 3 T13: 0.0081 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 1.1019 L22: 0.6329 REMARK 3 L33: 0.3170 L12: 0.1959 REMARK 3 L13: 0.2673 L23: 0.1904 REMARK 3 S TENSOR REMARK 3 S11: 0.0221 S12: 0.0353 S13: -0.1292 REMARK 3 S21: 0.0481 S22: -0.0277 S23: -0.0079 REMARK 3 S31: 0.0445 S32: -0.0440 S33: 0.0056 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FRIEDEL PAIRS WERE USED FOR REMARK 3 PHASING. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 2QQ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000043915. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC REMARK 200 OPTICS : OSMIC REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS HTC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91499 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 22.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : 0.06500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.56700 REMARK 200 R SYM FOR SHELL (I) : 0.66000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2AE1, 1AE1, 2EW8, 1ZEM, 1AHH, 1VL8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4M NA MALONATE PH 7.0, PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.11250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.92700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 50.29150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 28.11250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.92700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 50.29150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.11250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.92700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 50.29150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 28.11250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.92700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 50.29150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3500 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 56.22500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 87.85400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1740 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 56.22500 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 100.58300 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10540 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 56.22500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 87.85400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 56.22500 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 100.58300 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 87.85400 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 100.58300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 202 REMARK 465 GLU A 203 REMARK 465 HIS A 204 REMARK 465 MET A 205 REMARK 465 ALA A 206 REMARK 465 LYS A 207 REMARK 465 GLU A 208 REMARK 465 GLU A 209 REMARK 465 VAL A 210 REMARK 465 LEU A 211 REMARK 465 GLN A 212 REMARK 465 ASP A 213 REMARK 465 PRO A 214 REMARK 465 VAL A 215 REMARK 465 LEU A 216 REMARK 465 LYS A 217 REMARK 465 GLN A 218 REMARK 465 PHE A 219 REMARK 465 LYS A 220 REMARK 465 SER A 221 REMARK 465 ALA A 222 REMARK 465 PHE A 223 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 39 CZ NH1 NH2 REMARK 470 ARG A 104 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 106 CD CE NZ REMARK 470 MET A 158 SD CE REMARK 470 ILE A 195 CD1 REMARK 470 GLN A 197 CG CD OE1 NE2 REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 470 LEU A 200 CG CD1 CD2 REMARK 470 GLU A 227 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG MET A 158 O HOH A 338 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 121 -85.47 -87.30 REMARK 500 LEU A 124 -61.38 -145.55 REMARK 500 PHE A 159 -62.86 71.33 REMARK 500 REMARK 500 REMARK: NULL DBREF 2QQ5 A 3 262 UNP Q96LJ7 DHRS1_HUMAN 3 262 SEQRES 1 A 260 ALA PRO MET ASN GLY GLN VAL CYS VAL VAL THR GLY ALA SEQRES 2 A 260 SER ARG GLY ILE GLY ARG GLY ILE ALA LEU GLN LEU CYS SEQRES 3 A 260 LYS ALA GLY ALA THR VAL TYR ILE THR GLY ARG HIS LEU SEQRES 4 A 260 ASP THR LEU ARG VAL VAL ALA GLN GLU ALA GLN SER LEU SEQRES 5 A 260 GLY GLY GLN CYS VAL PRO VAL VAL CYS ASP SER SER GLN SEQRES 6 A 260 GLU SER GLU VAL ARG SER LEU PHE GLU GLN VAL ASP ARG SEQRES 7 A 260 GLU GLN GLN GLY ARG LEU ASP VAL LEU VAL ASN ASN ALA SEQRES 8 A 260 TYR ALA GLY VAL GLN THR ILE LEU ASN THR ARG ASN LYS SEQRES 9 A 260 ALA PHE TRP GLU THR PRO ALA SER MET TRP ASP ASP ILE SEQRES 10 A 260 ASN ASN VAL GLY LEU ARG GLY HIS TYR PHE CYS SER VAL SEQRES 11 A 260 TYR GLY ALA ARG LEU MET VAL PRO ALA GLY GLN GLY LEU SEQRES 12 A 260 ILE VAL VAL ILE SER SER PRO GLY SER LEU GLN TYR MET SEQRES 13 A 260 PHE ASN VAL PRO TYR GLY VAL GLY LYS ALA ALA CYS ASP SEQRES 14 A 260 LYS LEU ALA ALA ASP CYS ALA HIS GLU LEU ARG ARG HIS SEQRES 15 A 260 GLY VAL SER CYS VAL SER LEU TRP PRO GLY ILE VAL GLN SEQRES 16 A 260 THR GLU LEU LEU LYS GLU HIS MET ALA LYS GLU GLU VAL SEQRES 17 A 260 LEU GLN ASP PRO VAL LEU LYS GLN PHE LYS SER ALA PHE SEQRES 18 A 260 SER SER ALA GLU THR THR GLU LEU SER GLY LYS CYS VAL SEQRES 19 A 260 VAL ALA LEU ALA THR ASP PRO ASN ILE LEU SER LEU SER SEQRES 20 A 260 GLY LYS VAL LEU PRO SER CYS ASP LEU ALA ARG ARG TYR FORMUL 2 HOH *201(H2 O) HELIX 1 1 ARG A 17 ALA A 30 1 14 HELIX 2 2 HIS A 40 GLY A 55 1 16 HELIX 3 3 GLN A 67 GLN A 83 1 17 HELIX 4 4 GLY A 96 THR A 103 1 8 HELIX 5 5 SER A 114 ASN A 121 1 8 HELIX 6 6 LEU A 124 VAL A 139 1 16 HELIX 7 7 PRO A 140 GLY A 142 5 3 HELIX 8 8 SER A 151 LEU A 155 5 5 HELIX 9 9 ASN A 160 ARG A 182 1 23 HELIX 10 10 ARG A 183 GLY A 185 5 3 HELIX 11 11 SER A 224 THR A 241 1 18 HELIX 12 12 ASN A 244 SER A 249 5 6 HELIX 13 13 SER A 255 TYR A 262 1 8 SHEET 1 A 7 GLN A 57 VAL A 62 0 SHEET 2 A 7 THR A 33 GLY A 38 1 N ILE A 36 O VAL A 61 SHEET 3 A 7 VAL A 9 VAL A 12 1 N CYS A 10 O TYR A 35 SHEET 4 A 7 VAL A 88 ASN A 91 1 O VAL A 90 N VAL A 11 SHEET 5 A 7 LEU A 145 ILE A 149 1 O VAL A 147 N ASN A 91 SHEET 6 A 7 SER A 187 TRP A 192 1 O LEU A 191 N VAL A 148 SHEET 7 A 7 VAL A 252 PRO A 254 1 O LEU A 253 N SER A 190 SSBOND 1 CYS A 256 CYS A 256 1555 3656 2.05 CRYST1 56.225 87.854 100.583 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017786 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011383 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009942 0.00000