data_2QSC # _entry.id 2QSC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2QSC RCSB RCSB043993 WWPDB D_1000043993 # _pdbx_database_status.entry_id 2QSC _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-07-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bell, C.H.' 1 'Schiefner, A.' 2 'Stanfield, R.L.' 3 'Wilson, I.A.' 4 # _citation.id primary _citation.title 'Structure of antibody F425-B4e8 in complex with a V3 peptide reveals a new binding mode for HIV-1 neutralization.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 375 _citation.page_first 969 _citation.page_last 978 _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18068724 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2007.11.013 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bell, C.H.' 1 ? primary 'Pantophlet, R.' 2 ? primary 'Schiefner, A.' 3 ? primary 'Cavacini, L.A.' 4 ? primary 'Stanfield, R.L.' 5 ? primary 'Burton, D.R.' 6 ? primary 'Wilson, I.A.' 7 ? # _cell.entry_id 2QSC _cell.length_a 82.912 _cell.length_b 39.858 _cell.length_c 97.960 _cell.angle_alpha 90.00 _cell.angle_beta 108.50 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2QSC _symmetry.space_group_name_H-M 'P 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Fab F425-B4e8, Light chain' 23325.727 1 ? ? 'Light chain' ? 2 polymer man 'Fab F425-B4e8, Heavy chain' 23728.277 1 ? ? 'Heavy chain' ? 3 polymer syn 'Envelope glycoprotein gp120' 1778.090 1 ? ? 'Residues 301-326' ? 4 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 5 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 6 non-polymer syn 'CHLORIDE ION' 35.453 4 ? ? ? ? 7 water nat water 18.015 15 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Env polyprotein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NSVLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQHKPGKAPKLLIYTASNLETGVPSRFSGGGSGTHFSFTITSLQP EDAATYFCQQYDNLGDLSFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; ;NSVLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQHKPGKAPKLLIYTASNLETGVPSRFSGGGSGTHFSFTITSLQP EDAATYFCQQYDNLGDLSFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; L ? 2 'polypeptide(L)' no no ;QVQLVQSGGGLVQPGGSLRLSCAAFGFNFSSYVMHWVRQAPGQGLEYLSAISSDGETTYHANSVKGRFTSSRDNSKNTLF LQMGSLRTEDVAVYYCARDRYYETSGSNAFDVWGQGTMVVVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSNFGTQTYTCNVDHKPSNTKVDKTVE ; ;QVQLVQSGGGLVQPGGSLRLSCAAFGFNFSSYVMHWVRQAPGQGLEYLSAISSDGETTYHANSVKGRFTSSRDNSKNTLF LQMGSLRTEDVAVYYCARDRYYETSGSNAFDVWGQGTMVVVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSNFGTQTYTCNVDHKPSNTKVDKTVE ; H ? 3 'polypeptide(L)' no no RKRIHIGPGRAFYTT RKRIHIGPGRAFYTT P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 SER n 1 3 VAL n 1 4 LEU n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 PRO n 1 9 SER n 1 10 SER n 1 11 LEU n 1 12 SER n 1 13 ALA n 1 14 SER n 1 15 VAL n 1 16 GLY n 1 17 ASP n 1 18 ARG n 1 19 VAL n 1 20 THR n 1 21 ILE n 1 22 THR n 1 23 CYS n 1 24 GLN n 1 25 ALA n 1 26 SER n 1 27 GLN n 1 28 ASP n 1 29 ILE n 1 30 SER n 1 31 ASN n 1 32 TYR n 1 33 LEU n 1 34 ASN n 1 35 TRP n 1 36 TYR n 1 37 GLN n 1 38 HIS n 1 39 LYS n 1 40 PRO n 1 41 GLY n 1 42 LYS n 1 43 ALA n 1 44 PRO n 1 45 LYS n 1 46 LEU n 1 47 LEU n 1 48 ILE n 1 49 TYR n 1 50 THR n 1 51 ALA n 1 52 SER n 1 53 ASN n 1 54 LEU n 1 55 GLU n 1 56 THR n 1 57 GLY n 1 58 VAL n 1 59 PRO n 1 60 SER n 1 61 ARG n 1 62 PHE n 1 63 SER n 1 64 GLY n 1 65 GLY n 1 66 GLY n 1 67 SER n 1 68 GLY n 1 69 THR n 1 70 HIS n 1 71 PHE n 1 72 SER n 1 73 PHE n 1 74 THR n 1 75 ILE n 1 76 THR n 1 77 SER n 1 78 LEU n 1 79 GLN n 1 80 PRO n 1 81 GLU n 1 82 ASP n 1 83 ALA n 1 84 ALA n 1 85 THR n 1 86 TYR n 1 87 PHE n 1 88 CYS n 1 89 GLN n 1 90 GLN n 1 91 TYR n 1 92 ASP n 1 93 ASN n 1 94 LEU n 1 95 GLY n 1 96 ASP n 1 97 LEU n 1 98 SER n 1 99 PHE n 1 100 GLY n 1 101 GLY n 1 102 GLY n 1 103 THR n 1 104 LYS n 1 105 VAL n 1 106 GLU n 1 107 ILE n 1 108 LYS n 1 109 ARG n 1 110 THR n 1 111 VAL n 1 112 ALA n 1 113 ALA n 1 114 PRO n 1 115 SER n 1 116 VAL n 1 117 PHE n 1 118 ILE n 1 119 PHE n 1 120 PRO n 1 121 PRO n 1 122 SER n 1 123 ASP n 1 124 GLU n 1 125 GLN n 1 126 LEU n 1 127 LYS n 1 128 SER n 1 129 GLY n 1 130 THR n 1 131 ALA n 1 132 SER n 1 133 VAL n 1 134 VAL n 1 135 CYS n 1 136 LEU n 1 137 LEU n 1 138 ASN n 1 139 ASN n 1 140 PHE n 1 141 TYR n 1 142 PRO n 1 143 ARG n 1 144 GLU n 1 145 ALA n 1 146 LYS n 1 147 VAL n 1 148 GLN n 1 149 TRP n 1 150 LYS n 1 151 VAL n 1 152 ASP n 1 153 ASN n 1 154 ALA n 1 155 LEU n 1 156 GLN n 1 157 SER n 1 158 GLY n 1 159 ASN n 1 160 SER n 1 161 GLN n 1 162 GLU n 1 163 SER n 1 164 VAL n 1 165 THR n 1 166 GLU n 1 167 GLN n 1 168 ASP n 1 169 SER n 1 170 LYS n 1 171 ASP n 1 172 SER n 1 173 THR n 1 174 TYR n 1 175 SER n 1 176 LEU n 1 177 SER n 1 178 SER n 1 179 THR n 1 180 LEU n 1 181 THR n 1 182 LEU n 1 183 SER n 1 184 LYS n 1 185 ALA n 1 186 ASP n 1 187 TYR n 1 188 GLU n 1 189 LYS n 1 190 HIS n 1 191 LYS n 1 192 VAL n 1 193 TYR n 1 194 ALA n 1 195 CYS n 1 196 GLU n 1 197 VAL n 1 198 THR n 1 199 HIS n 1 200 GLN n 1 201 GLY n 1 202 LEU n 1 203 SER n 1 204 SER n 1 205 PRO n 1 206 VAL n 1 207 THR n 1 208 LYS n 1 209 SER n 1 210 PHE n 1 211 ASN n 1 212 ARG n 1 213 GLY n 1 214 GLU n 1 215 CYS n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLN n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 LEU n 2 12 VAL n 2 13 GLN n 2 14 PRO n 2 15 GLY n 2 16 GLY n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 PHE n 2 26 GLY n 2 27 PHE n 2 28 ASN n 2 29 PHE n 2 30 SER n 2 31 SER n 2 32 TYR n 2 33 VAL n 2 34 MET n 2 35 HIS n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 GLN n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TYR n 2 48 LEU n 2 49 SER n 2 50 ALA n 2 51 ILE n 2 52 SER n 2 53 SER n 2 54 ASP n 2 55 GLY n 2 56 GLU n 2 57 THR n 2 58 THR n 2 59 TYR n 2 60 HIS n 2 61 ALA n 2 62 ASN n 2 63 SER n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 THR n 2 70 SER n 2 71 SER n 2 72 ARG n 2 73 ASP n 2 74 ASN n 2 75 SER n 2 76 LYS n 2 77 ASN n 2 78 THR n 2 79 LEU n 2 80 PHE n 2 81 LEU n 2 82 GLN n 2 83 MET n 2 84 GLY n 2 85 SER n 2 86 LEU n 2 87 ARG n 2 88 THR n 2 89 GLU n 2 90 ASP n 2 91 VAL n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ALA n 2 98 ARG n 2 99 ASP n 2 100 ARG n 2 101 TYR n 2 102 TYR n 2 103 GLU n 2 104 THR n 2 105 SER n 2 106 GLY n 2 107 SER n 2 108 ASN n 2 109 ALA n 2 110 PHE n 2 111 ASP n 2 112 VAL n 2 113 TRP n 2 114 GLY n 2 115 GLN n 2 116 GLY n 2 117 THR n 2 118 MET n 2 119 VAL n 2 120 VAL n 2 121 VAL n 2 122 SER n 2 123 SER n 2 124 ALA n 2 125 SER n 2 126 THR n 2 127 LYS n 2 128 GLY n 2 129 PRO n 2 130 SER n 2 131 VAL n 2 132 PHE n 2 133 PRO n 2 134 LEU n 2 135 ALA n 2 136 PRO n 2 137 CYS n 2 138 SER n 2 139 ARG n 2 140 SER n 2 141 THR n 2 142 SER n 2 143 GLU n 2 144 SER n 2 145 THR n 2 146 ALA n 2 147 ALA n 2 148 LEU n 2 149 GLY n 2 150 CYS n 2 151 LEU n 2 152 VAL n 2 153 LYS n 2 154 ASP n 2 155 TYR n 2 156 PHE n 2 157 PRO n 2 158 GLU n 2 159 PRO n 2 160 VAL n 2 161 THR n 2 162 VAL n 2 163 SER n 2 164 TRP n 2 165 ASN n 2 166 SER n 2 167 GLY n 2 168 ALA n 2 169 LEU n 2 170 THR n 2 171 SER n 2 172 GLY n 2 173 VAL n 2 174 HIS n 2 175 THR n 2 176 PHE n 2 177 PRO n 2 178 ALA n 2 179 VAL n 2 180 LEU n 2 181 GLN n 2 182 SER n 2 183 SER n 2 184 GLY n 2 185 LEU n 2 186 TYR n 2 187 SER n 2 188 LEU n 2 189 SER n 2 190 SER n 2 191 VAL n 2 192 VAL n 2 193 THR n 2 194 VAL n 2 195 PRO n 2 196 SER n 2 197 SER n 2 198 ASN n 2 199 PHE n 2 200 GLY n 2 201 THR n 2 202 GLN n 2 203 THR n 2 204 TYR n 2 205 THR n 2 206 CYS n 2 207 ASN n 2 208 VAL n 2 209 ASP n 2 210 HIS n 2 211 LYS n 2 212 PRO n 2 213 SER n 2 214 ASN n 2 215 THR n 2 216 LYS n 2 217 VAL n 2 218 ASP n 2 219 LYS n 2 220 THR n 2 221 VAL n 2 222 GLU n 3 1 ARG n 3 2 LYS n 3 3 ARG n 3 4 ILE n 3 5 HIS n 3 6 ILE n 3 7 GLY n 3 8 PRO n 3 9 GLY n 3 10 ARG n 3 11 ALA n 3 12 PHE n 3 13 TYR n 3 14 THR n 3 15 THR n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 Homo ? ? ? ? ? ? ? 'HMMA myeloma cells' ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human Homo ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 Homo ? ? ? ? ? ? ? 'HMMA myeloma cells' ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'THIS SEQUENCE OCCURS IN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (ISOLATE MN)' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 PDB 2QSC 2QSC 1 ;NSVLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQHKPGKAPKLLIYTASNLETGVPSRFSGGGSGTHFSFTITSLQP EDAATYFCQQYDNLGDLSFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; 1 ? 2 PDB 2QSC 2QSC 2 ;QVQLVQSGGGLVQPGGSLRLSCAAFGFNFSSYVMHWVRQAPGQGLEYLSAISSDGETTYHANSVKGRFTSSRDNSKNTLF LQMGSLRTEDVAVYYCARDRYYETSGSNAFDVWGQGTMVVVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPV TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSNFGTQTYTCNVDHKPSNTKVDKTVE ; 1 ? 3 UNP ENV_HV1MN P05877 3 RKRIHIGPGRAFYTT 309 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2QSC L 1 ? 215 ? 2QSC 1 ? 214 ? 1 214 2 2 2QSC H 1 ? 222 ? 2QSC 1 ? 226 ? 1 226 3 3 2QSC P 1 ? 15 ? P05877 309 ? 323 ? 304 320 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.entry_id 2QSC _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 60.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details 'PEG 8000, pH 6.0, VAPOR DIFFUSION, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2007-01-01 _diffrn_detector.details 'Rh coated flat mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 # _reflns.entry_id 2QSC _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 50.0 _reflns.number_all ? _reflns.number_obs 15169 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.102 _reflns.pdbx_netI_over_sigmaI 12.6 _reflns.B_iso_Wilson_estimate 60.8 _reflns.pdbx_redundancy 3.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.87 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 94.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_Rsym_value 0.476 _reflns_shell.pdbx_redundancy 3.2 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2QSC _refine.ls_d_res_high 2.800 _refine.ls_d_res_low 50.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.850 _refine.ls_number_reflns_obs 15169 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_obs 0.222 _refine.ls_R_factor_R_work 0.219 _refine.ls_R_factor_R_free 0.264 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 755 _refine.B_iso_mean 49.742 _refine.aniso_B[1][1] -0.750 _refine.aniso_B[2][2] 3.430 _refine.aniso_B[3][3] -1.550 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 1.780 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.922 _refine.correlation_coeff_Fo_to_Fc_free 0.883 _refine.pdbx_overall_ESU_R 1.380 _refine.pdbx_overall_ESU_R_Free 0.368 _refine.overall_SU_ML 0.286 _refine.overall_SU_B 29.893 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3353 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 47 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 3415 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 50.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 3484 0.005 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 4740 0.946 1.962 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 435 5.250 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 143 36.385 24.196 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 537 14.640 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15 10.550 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 543 0.060 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2608 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 1308 0.172 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 2292 0.298 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 121 0.106 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 4 0.067 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 34 0.196 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 3 0.028 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2231 0.147 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3525 0.267 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1415 0.435 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1215 0.820 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.877 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 92.990 _refine_ls_shell.number_reflns_R_work 1000 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.330 _refine_ls_shell.R_factor_R_free 0.407 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1048 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2QSC _struct.title 'Crystal structure analysis of anti-HIV-1 V3-Fab F425-B4e8 in complex with a V3-peptide' _struct.pdbx_descriptor 'Fab F425-B4e8, Light chain, Fab F425-B4e8, Heavy chain, Envelope glycoprotein gp120' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2QSC _struct_keywords.text ;Fab-peptide complex, HIV-1, gp120, V3 loop, immunoglobulin fold, AIDS, Apoptosis, Envelope protein, Fusion protein, Glycoprotein, Host-virus interaction, Membrane, Transmembrane, Viral immunoevasion, Virion, immune system ; _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 5 ? I N N 5 ? J N N 6 ? K N N 6 ? L N N 6 ? M N N 7 ? N N N 7 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 79 ? ALA A 83 ? GLN L 79 ALA L 83 5 ? 5 HELX_P HELX_P2 2 SER A 122 ? LYS A 127 ? SER L 121 LYS L 126 1 ? 6 HELX_P HELX_P3 3 LYS A 184 ? GLU A 188 ? LYS L 183 GLU L 187 1 ? 5 HELX_P HELX_P4 4 ASN B 28 ? TYR B 32 ? ASN H 28 TYR H 32 5 ? 5 HELX_P HELX_P5 5 ASN B 74 ? LYS B 76 ? ASN H 73 LYS H 75 5 ? 3 HELX_P HELX_P6 6 ARG B 87 ? VAL B 91 ? ARG H 83 VAL H 87 5 ? 5 HELX_P HELX_P7 7 SER B 166 ? ALA B 168 ? SER H 163 ALA H 165 5 ? 3 HELX_P HELX_P8 8 LYS B 211 ? ASN B 214 ? LYS H 213 ASN H 216 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 88 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.739 ? ? disulf2 disulf ? ? A CYS 135 SG ? ? ? 1_555 A CYS 195 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 215 SG ? ? ? 1_555 B CYS 137 SG ? ? L CYS 214 H CYS 127 1_555 ? ? ? ? ? ? ? 2.003 ? ? disulf4 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf5 disulf ? ? B CYS 150 SG ? ? ? 1_555 B CYS 206 SG ? ? H CYS 142 H CYS 208 1_555 ? ? ? ? ? ? ? 2.040 ? ? covale1 covale one ? B ASN 28 ND2 ? ? ? 1_555 D NAG . C1 ? ? H ASN 28 A NAG 1 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation covale2 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? A NAG 1 A NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale3 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? A NAG 2 A BMA 3 1_555 ? ? ? ? ? ? ? 1.445 ? ? metalc1 metalc ? ? A HIS 70 ND1 ? ? ? 1_555 F ZN . ZN ? ? L HIS 70 L ZN 216 1_555 ? ? ? ? ? ? ? 2.052 ? ? metalc2 metalc ? ? A ASN 138 OD1 ? ? ? 1_555 E ZN . ZN ? ? L ASN 137 L ZN 215 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc3 metalc ? ? A ASN 139 OD1 ? ? ? 1_555 E ZN . ZN ? ? L ASN 138 L ZN 215 1_555 ? ? ? ? ? ? ? 2.342 ? ? metalc4 metalc ? ? E ZN . ZN ? ? ? 1_555 B HIS 174 NE2 ? ? L ZN 215 H HIS 172 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc5 metalc ? ? B ASP 54 OD2 ? ? ? 1_555 H ZN . ZN ? ? H ASP 53 H ZN 230 1_555 ? ? ? ? ? ? ? 1.949 ? ? metalc6 metalc ? ? B GLU 56 OE2 ? ? ? 1_555 H ZN . ZN ? ? H GLU 55 H ZN 230 1_555 ? ? ? ? ? ? ? 2.227 ? ? metalc7 metalc ? ? B GLU 89 OE1 ? ? ? 1_555 I ZN . ZN ? ? H GLU 85 H ZN 231 1_555 ? ? ? ? ? ? ? 2.289 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 A . ? SER 7 L PRO 8 A ? PRO 8 L 1 -5.57 2 TYR 141 A . ? TYR 140 L PRO 142 A ? PRO 141 L 1 -0.42 3 PHE 156 B . ? PHE 148 H PRO 157 B ? PRO 149 H 1 -9.86 4 GLU 158 B . ? GLU 150 H PRO 159 B ? PRO 151 H 1 0.50 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 3 ? F ? 4 ? G ? 6 ? H ? 4 ? I ? 4 ? J ? 4 ? K ? 3 ? L ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel G 5 6 ? anti-parallel H 1 2 ? parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel L 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 4 ? SER A 7 ? LEU L 4 SER L 7 A 2 VAL A 19 ? ALA A 25 ? VAL L 19 ALA L 25 A 3 HIS A 70 ? ILE A 75 ? HIS L 70 ILE L 75 A 4 PHE A 62 ? SER A 67 ? PHE L 62 SER L 67 B 1 SER A 10 ? SER A 14 ? SER L 10 SER L 14 B 2 THR A 103 ? LYS A 108 ? THR L 102 LYS L 107 B 3 THR A 85 ? GLN A 90 ? THR L 85 GLN L 90 B 4 LEU A 33 ? HIS A 38 ? LEU L 33 HIS L 38 B 5 LYS A 45 ? TYR A 49 ? LYS L 45 TYR L 49 B 6 ASN A 53 ? LEU A 54 ? ASN L 53 LEU L 54 C 1 SER A 10 ? SER A 14 ? SER L 10 SER L 14 C 2 THR A 103 ? LYS A 108 ? THR L 102 LYS L 107 C 3 THR A 85 ? GLN A 90 ? THR L 85 GLN L 90 C 4 SER A 98 ? PHE A 99 ? SER L 97 PHE L 98 D 1 SER A 115 ? PHE A 119 ? SER L 114 PHE L 118 D 2 THR A 130 ? PHE A 140 ? THR L 129 PHE L 139 D 3 TYR A 174 ? SER A 183 ? TYR L 173 SER L 182 D 4 SER A 160 ? VAL A 164 ? SER L 159 VAL L 163 E 1 LYS A 146 ? VAL A 151 ? LYS L 145 VAL L 150 E 2 VAL A 192 ? THR A 198 ? VAL L 191 THR L 197 E 3 VAL A 206 ? ASN A 211 ? VAL L 205 ASN L 210 F 1 GLN B 3 ? SER B 7 ? GLN H 3 SER H 7 F 2 LEU B 18 ? PHE B 25 ? LEU H 18 PHE H 25 F 3 THR B 78 ? MET B 83 ? THR H 77 MET H 82 F 4 PHE B 68 ? ASP B 73 ? PHE H 67 ASP H 72 G 1 GLY B 10 ? VAL B 12 ? GLY H 10 VAL H 12 G 2 THR B 117 ? VAL B 121 ? THR H 107 VAL H 111 G 3 ALA B 92 ? TYR B 102 ? ALA H 88 TYR H 98 G 4 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 G 5 LEU B 45 ? ILE B 51 ? LEU H 45 ILE H 51 G 6 THR B 58 ? HIS B 60 ? THR H 57 HIS H 59 H 1 GLY B 10 ? VAL B 12 ? GLY H 10 VAL H 12 H 2 THR B 117 ? VAL B 121 ? THR H 107 VAL H 111 H 3 ALA B 92 ? TYR B 102 ? ALA H 88 TYR H 98 H 4 SER B 107 C TRP B 113 ? SER H 100 TRP H 103 I 1 SER B 130 ? LEU B 134 ? SER H 120 LEU H 124 I 2 ALA B 147 ? TYR B 155 ? ALA H 139 TYR H 147 I 3 TYR B 186 ? THR B 193 ? TYR H 185 THR H 192 I 4 HIS B 174 ? THR B 175 ? HIS H 172 THR H 173 J 1 SER B 130 ? LEU B 134 ? SER H 120 LEU H 124 J 2 ALA B 147 ? TYR B 155 ? ALA H 139 TYR H 147 J 3 TYR B 186 ? THR B 193 ? TYR H 185 THR H 192 J 4 VAL B 179 ? LEU B 180 ? VAL H 177 LEU H 178 K 1 THR B 161 ? TRP B 164 ? THR H 153 TRP H 157 K 2 TYR B 204 ? HIS B 210 ? TYR H 206 HIS H 212 K 3 THR B 215 ? VAL B 221 ? THR H 217 VAL H 223 L 1 LYS C 2 ? HIS C 5 ? LYS P 305 HIS P 308 L 2 PHE C 12 ? THR C 15 ? PHE P 317 THR P 320 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 7 ? N SER L 7 O THR A 22 ? O THR L 22 A 2 3 N ILE A 21 ? N ILE L 21 O PHE A 73 ? O PHE L 73 A 3 4 O THR A 74 ? O THR L 74 N SER A 63 ? N SER L 63 B 1 2 N LEU A 11 ? N LEU L 11 O GLU A 106 ? O GLU L 105 B 2 3 O THR A 103 ? O THR L 102 N TYR A 86 ? N TYR L 86 B 3 4 O PHE A 87 ? O PHE L 87 N TYR A 36 ? N TYR L 36 B 4 5 N GLN A 37 ? N GLN L 37 O LYS A 45 ? O LYS L 45 B 5 6 N TYR A 49 ? N TYR L 49 O ASN A 53 ? O ASN L 53 C 1 2 N LEU A 11 ? N LEU L 11 O GLU A 106 ? O GLU L 105 C 2 3 O THR A 103 ? O THR L 102 N TYR A 86 ? N TYR L 86 C 3 4 N GLN A 90 ? N GLN L 90 O SER A 98 ? O SER L 97 D 1 2 N PHE A 117 ? N PHE L 116 O LEU A 136 ? O LEU L 135 D 2 3 N ALA A 131 ? N ALA L 130 O LEU A 182 ? O LEU L 181 D 3 4 O SER A 177 ? O SER L 176 N SER A 163 ? N SER L 162 E 1 2 N LYS A 150 ? N LYS L 149 O ALA A 194 ? O ALA L 193 E 2 3 N VAL A 197 ? N VAL L 196 O VAL A 206 ? O VAL L 205 F 1 2 N VAL B 5 ? N VAL H 5 O ALA B 23 ? O ALA H 23 F 2 3 N CYS B 22 ? N CYS H 22 O LEU B 79 ? O LEU H 78 F 3 4 O PHE B 80 ? O PHE H 79 N SER B 71 ? N SER H 70 G 1 2 N GLY B 10 ? N GLY H 10 O VAL B 120 ? O VAL H 110 G 2 3 O THR B 117 ? O THR H 107 N TYR B 94 ? N TYR H 90 G 3 4 O TYR B 95 ? O TYR H 91 N VAL B 37 ? N VAL H 37 G 4 5 N ARG B 38 ? N ARG H 38 O GLU B 46 ? O GLU H 46 G 5 6 N ALA B 50 ? N ALA H 50 O TYR B 59 ? O TYR H 58 H 1 2 N GLY B 10 ? N GLY H 10 O VAL B 120 ? O VAL H 110 H 2 3 O THR B 117 ? O THR H 107 N TYR B 94 ? N TYR H 90 H 3 4 N ARG B 98 ? N ARG H 94 O VAL B 112 ? O VAL H 102 I 1 2 N PHE B 132 ? N PHE H 122 O LEU B 151 ? O LEU H 143 I 2 3 N CYS B 150 ? N CYS H 142 O SER B 190 ? O SER H 189 I 3 4 O VAL B 191 ? O VAL H 190 N HIS B 174 ? N HIS H 172 J 1 2 N PHE B 132 ? N PHE H 122 O LEU B 151 ? O LEU H 143 J 2 3 N CYS B 150 ? N CYS H 142 O SER B 190 ? O SER H 189 J 3 4 O SER B 187 ? O SER H 186 N VAL B 179 ? N VAL H 177 K 1 2 N SER B 163 ? N SER H 156 O ASN B 207 ? O ASN H 209 K 2 3 N VAL B 208 ? N VAL H 210 O VAL B 217 ? O VAL H 219 L 1 2 N ILE C 4 ? N ILE P 307 O TYR C 13 ? O TYR P 318 # _atom_sites.entry_id 2QSC _atom_sites.fract_transf_matrix[1][1] 0.012061 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004036 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025089 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010765 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1 1 ASN ASN L . n A 1 2 SER 2 2 2 SER SER L . n A 1 3 VAL 3 3 3 VAL VAL L . n A 1 4 LEU 4 4 4 LEU LEU L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 SER 7 7 7 SER SER L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 SER 9 9 9 SER SER L . n A 1 10 SER 10 10 10 SER SER L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 SER 12 12 12 SER SER L . n A 1 13 ALA 13 13 13 ALA ALA L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 VAL 15 15 15 VAL VAL L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 ASP 17 17 17 ASP ASP L . n A 1 18 ARG 18 18 18 ARG ARG L . n A 1 19 VAL 19 19 19 VAL VAL L . n A 1 20 THR 20 20 20 THR THR L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 THR 22 22 22 THR THR L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 GLN 24 24 24 GLN GLN L . n A 1 25 ALA 25 25 25 ALA ALA L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLN 27 27 27 GLN GLN L . n A 1 28 ASP 28 28 28 ASP ASP L . n A 1 29 ILE 29 29 29 ILE ILE L . n A 1 30 SER 30 30 30 SER SER L . n A 1 31 ASN 31 31 31 ASN ASN L . n A 1 32 TYR 32 32 32 TYR TYR L . n A 1 33 LEU 33 33 33 LEU LEU L . n A 1 34 ASN 34 34 34 ASN ASN L . n A 1 35 TRP 35 35 35 TRP TRP L . n A 1 36 TYR 36 36 36 TYR TYR L . n A 1 37 GLN 37 37 37 GLN GLN L . n A 1 38 HIS 38 38 38 HIS HIS L . n A 1 39 LYS 39 39 39 LYS LYS L . n A 1 40 PRO 40 40 40 PRO PRO L . n A 1 41 GLY 41 41 41 GLY GLY L . n A 1 42 LYS 42 42 42 LYS LYS L . n A 1 43 ALA 43 43 43 ALA ALA L . n A 1 44 PRO 44 44 44 PRO PRO L . n A 1 45 LYS 45 45 45 LYS LYS L . n A 1 46 LEU 46 46 46 LEU LEU L . n A 1 47 LEU 47 47 47 LEU LEU L . n A 1 48 ILE 48 48 48 ILE ILE L . n A 1 49 TYR 49 49 49 TYR TYR L . n A 1 50 THR 50 50 50 THR THR L . n A 1 51 ALA 51 51 51 ALA ALA L . n A 1 52 SER 52 52 52 SER SER L . n A 1 53 ASN 53 53 53 ASN ASN L . n A 1 54 LEU 54 54 54 LEU LEU L . n A 1 55 GLU 55 55 55 GLU GLU L . n A 1 56 THR 56 56 56 THR THR L . n A 1 57 GLY 57 57 57 GLY GLY L . n A 1 58 VAL 58 58 58 VAL VAL L . n A 1 59 PRO 59 59 59 PRO PRO L . n A 1 60 SER 60 60 60 SER SER L . n A 1 61 ARG 61 61 61 ARG ARG L . n A 1 62 PHE 62 62 62 PHE PHE L . n A 1 63 SER 63 63 63 SER SER L . n A 1 64 GLY 64 64 64 GLY GLY L . n A 1 65 GLY 65 65 65 GLY GLY L . n A 1 66 GLY 66 66 66 GLY GLY L . n A 1 67 SER 67 67 67 SER SER L . n A 1 68 GLY 68 68 68 GLY GLY L . n A 1 69 THR 69 69 69 THR THR L . n A 1 70 HIS 70 70 70 HIS HIS L . n A 1 71 PHE 71 71 71 PHE PHE L . n A 1 72 SER 72 72 72 SER SER L . n A 1 73 PHE 73 73 73 PHE PHE L . n A 1 74 THR 74 74 74 THR THR L . n A 1 75 ILE 75 75 75 ILE ILE L . n A 1 76 THR 76 76 76 THR THR L . n A 1 77 SER 77 77 77 SER SER L . n A 1 78 LEU 78 78 78 LEU LEU L . n A 1 79 GLN 79 79 79 GLN GLN L . n A 1 80 PRO 80 80 80 PRO PRO L . n A 1 81 GLU 81 81 81 GLU GLU L . n A 1 82 ASP 82 82 82 ASP ASP L . n A 1 83 ALA 83 83 83 ALA ALA L . n A 1 84 ALA 84 84 84 ALA ALA L . n A 1 85 THR 85 85 85 THR THR L . n A 1 86 TYR 86 86 86 TYR TYR L . n A 1 87 PHE 87 87 87 PHE PHE L . n A 1 88 CYS 88 88 88 CYS CYS L . n A 1 89 GLN 89 89 89 GLN GLN L . n A 1 90 GLN 90 90 90 GLN GLN L . n A 1 91 TYR 91 91 91 TYR TYR L . n A 1 92 ASP 92 92 92 ASP ASP L . n A 1 93 ASN 93 93 93 ASN ASN L . n A 1 94 LEU 94 94 94 LEU LEU L . n A 1 95 GLY 95 95 95 GLY GLY L . n A 1 96 ASP 96 95 95 ASP ASP L A n A 1 97 LEU 97 96 96 LEU LEU L . n A 1 98 SER 98 97 97 SER SER L . n A 1 99 PHE 99 98 98 PHE PHE L . n A 1 100 GLY 100 99 99 GLY GLY L . n A 1 101 GLY 101 100 100 GLY GLY L . n A 1 102 GLY 102 101 101 GLY GLY L . n A 1 103 THR 103 102 102 THR THR L . n A 1 104 LYS 104 103 103 LYS LYS L . n A 1 105 VAL 105 104 104 VAL VAL L . n A 1 106 GLU 106 105 105 GLU GLU L . n A 1 107 ILE 107 106 106 ILE ILE L . n A 1 108 LYS 108 107 107 LYS LYS L . n A 1 109 ARG 109 108 108 ARG ARG L . n A 1 110 THR 110 109 109 THR THR L . n A 1 111 VAL 111 110 110 VAL VAL L . n A 1 112 ALA 112 111 111 ALA ALA L . n A 1 113 ALA 113 112 112 ALA ALA L . n A 1 114 PRO 114 113 113 PRO PRO L . n A 1 115 SER 115 114 114 SER SER L . n A 1 116 VAL 116 115 115 VAL VAL L . n A 1 117 PHE 117 116 116 PHE PHE L . n A 1 118 ILE 118 117 117 ILE ILE L . n A 1 119 PHE 119 118 118 PHE PHE L . n A 1 120 PRO 120 119 119 PRO PRO L . n A 1 121 PRO 121 120 120 PRO PRO L . n A 1 122 SER 122 121 121 SER SER L . n A 1 123 ASP 123 122 122 ASP ASP L . n A 1 124 GLU 124 123 123 GLU GLU L . n A 1 125 GLN 125 124 124 GLN GLN L . n A 1 126 LEU 126 125 125 LEU LEU L . n A 1 127 LYS 127 126 126 LYS LYS L . n A 1 128 SER 128 127 127 SER SER L . n A 1 129 GLY 129 128 128 GLY GLY L . n A 1 130 THR 130 129 129 THR THR L . n A 1 131 ALA 131 130 130 ALA ALA L . n A 1 132 SER 132 131 131 SER SER L . n A 1 133 VAL 133 132 132 VAL VAL L . n A 1 134 VAL 134 133 133 VAL VAL L . n A 1 135 CYS 135 134 134 CYS CYS L . n A 1 136 LEU 136 135 135 LEU LEU L . n A 1 137 LEU 137 136 136 LEU LEU L . n A 1 138 ASN 138 137 137 ASN ASN L . n A 1 139 ASN 139 138 138 ASN ASN L . n A 1 140 PHE 140 139 139 PHE PHE L . n A 1 141 TYR 141 140 140 TYR TYR L . n A 1 142 PRO 142 141 141 PRO PRO L . n A 1 143 ARG 143 142 142 ARG ARG L . n A 1 144 GLU 144 143 143 GLU GLU L . n A 1 145 ALA 145 144 144 ALA ALA L . n A 1 146 LYS 146 145 145 LYS LYS L . n A 1 147 VAL 147 146 146 VAL VAL L . n A 1 148 GLN 148 147 147 GLN GLN L . n A 1 149 TRP 149 148 148 TRP TRP L . n A 1 150 LYS 150 149 149 LYS LYS L . n A 1 151 VAL 151 150 150 VAL VAL L . n A 1 152 ASP 152 151 151 ASP ASP L . n A 1 153 ASN 153 152 152 ASN ASN L . n A 1 154 ALA 154 153 153 ALA ALA L . n A 1 155 LEU 155 154 154 LEU LEU L . n A 1 156 GLN 156 155 155 GLN GLN L . n A 1 157 SER 157 156 156 SER SER L . n A 1 158 GLY 158 157 157 GLY GLY L . n A 1 159 ASN 159 158 158 ASN ASN L . n A 1 160 SER 160 159 159 SER SER L . n A 1 161 GLN 161 160 160 GLN GLN L . n A 1 162 GLU 162 161 161 GLU GLU L . n A 1 163 SER 163 162 162 SER SER L . n A 1 164 VAL 164 163 163 VAL VAL L . n A 1 165 THR 165 164 164 THR THR L . n A 1 166 GLU 166 165 165 GLU GLU L . n A 1 167 GLN 167 166 166 GLN GLN L . n A 1 168 ASP 168 167 167 ASP ASP L . n A 1 169 SER 169 168 168 SER SER L . n A 1 170 LYS 170 169 169 LYS LYS L . n A 1 171 ASP 171 170 170 ASP ASP L . n A 1 172 SER 172 171 171 SER SER L . n A 1 173 THR 173 172 172 THR THR L . n A 1 174 TYR 174 173 173 TYR TYR L . n A 1 175 SER 175 174 174 SER SER L . n A 1 176 LEU 176 175 175 LEU LEU L . n A 1 177 SER 177 176 176 SER SER L . n A 1 178 SER 178 177 177 SER SER L . n A 1 179 THR 179 178 178 THR THR L . n A 1 180 LEU 180 179 179 LEU LEU L . n A 1 181 THR 181 180 180 THR THR L . n A 1 182 LEU 182 181 181 LEU LEU L . n A 1 183 SER 183 182 182 SER SER L . n A 1 184 LYS 184 183 183 LYS LYS L . n A 1 185 ALA 185 184 184 ALA ALA L . n A 1 186 ASP 186 185 185 ASP ASP L . n A 1 187 TYR 187 186 186 TYR TYR L . n A 1 188 GLU 188 187 187 GLU GLU L . n A 1 189 LYS 189 188 188 LYS LYS L . n A 1 190 HIS 190 189 189 HIS HIS L . n A 1 191 LYS 191 190 190 LYS LYS L . n A 1 192 VAL 192 191 191 VAL VAL L . n A 1 193 TYR 193 192 192 TYR TYR L . n A 1 194 ALA 194 193 193 ALA ALA L . n A 1 195 CYS 195 194 194 CYS CYS L . n A 1 196 GLU 196 195 195 GLU GLU L . n A 1 197 VAL 197 196 196 VAL VAL L . n A 1 198 THR 198 197 197 THR THR L . n A 1 199 HIS 199 198 198 HIS HIS L . n A 1 200 GLN 200 199 199 GLN GLN L . n A 1 201 GLY 201 200 200 GLY GLY L . n A 1 202 LEU 202 201 201 LEU LEU L . n A 1 203 SER 203 202 202 SER SER L . n A 1 204 SER 204 203 203 SER SER L . n A 1 205 PRO 205 204 204 PRO PRO L . n A 1 206 VAL 206 205 205 VAL VAL L . n A 1 207 THR 207 206 206 THR THR L . n A 1 208 LYS 208 207 207 LYS LYS L . n A 1 209 SER 209 208 208 SER SER L . n A 1 210 PHE 210 209 209 PHE PHE L . n A 1 211 ASN 211 210 210 ASN ASN L . n A 1 212 ARG 212 211 211 ARG ARG L . n A 1 213 GLY 213 212 212 GLY GLY L . n A 1 214 GLU 214 213 213 GLU GLU L . n A 1 215 CYS 215 214 214 CYS CYS L . n B 2 1 GLN 1 1 1 GLN GLN H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 VAL 5 5 5 VAL VAL H . n B 2 6 GLN 6 6 6 GLN GLN H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 GLY 9 9 9 GLY GLY H . n B 2 10 GLY 10 10 10 GLY GLY H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 VAL 12 12 12 VAL VAL H . n B 2 13 GLN 13 13 13 GLN GLN H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 GLY 16 16 16 GLY GLY H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 LEU 18 18 18 LEU LEU H . n B 2 19 ARG 19 19 19 ARG ARG H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 ALA 23 23 23 ALA ALA H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 PHE 25 25 25 PHE PHE H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 PHE 27 27 27 PHE PHE H . n B 2 28 ASN 28 28 28 ASN ASN H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 SER 30 30 30 SER SER H . n B 2 31 SER 31 31 31 SER SER H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 VAL 33 33 33 VAL VAL H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 HIS 35 35 35 HIS HIS H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 ARG 38 38 38 ARG ARG H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ALA 40 40 40 ALA ALA H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 GLN 43 43 43 GLN GLN H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TYR 47 47 47 TYR TYR H . n B 2 48 LEU 48 48 48 LEU LEU H . n B 2 49 SER 49 49 49 SER SER H . n B 2 50 ALA 50 50 50 ALA ALA H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 SER 52 52 52 SER SER H . n B 2 53 SER 53 52 52 SER SER H A n B 2 54 ASP 54 53 53 ASP ASP H . n B 2 55 GLY 55 54 54 GLY GLY H . n B 2 56 GLU 56 55 55 GLU GLU H . n B 2 57 THR 57 56 56 THR THR H . n B 2 58 THR 58 57 57 THR THR H . n B 2 59 TYR 59 58 58 TYR TYR H . n B 2 60 HIS 60 59 59 HIS HIS H . n B 2 61 ALA 61 60 60 ALA ALA H . n B 2 62 ASN 62 61 61 ASN ASN H . n B 2 63 SER 63 62 62 SER SER H . n B 2 64 VAL 64 63 63 VAL VAL H . n B 2 65 LYS 65 64 64 LYS LYS H . n B 2 66 GLY 66 65 65 GLY GLY H . n B 2 67 ARG 67 66 66 ARG ARG H . n B 2 68 PHE 68 67 67 PHE PHE H . n B 2 69 THR 69 68 68 THR THR H . n B 2 70 SER 70 69 69 SER SER H . n B 2 71 SER 71 70 70 SER SER H . n B 2 72 ARG 72 71 71 ARG ARG H . n B 2 73 ASP 73 72 72 ASP ASP H . n B 2 74 ASN 74 73 73 ASN ASN H . n B 2 75 SER 75 74 74 SER SER H . n B 2 76 LYS 76 75 75 LYS LYS H . n B 2 77 ASN 77 76 76 ASN ASN H . n B 2 78 THR 78 77 77 THR THR H . n B 2 79 LEU 79 78 78 LEU LEU H . n B 2 80 PHE 80 79 79 PHE PHE H . n B 2 81 LEU 81 80 80 LEU LEU H . n B 2 82 GLN 82 81 81 GLN GLN H . n B 2 83 MET 83 82 82 MET MET H . n B 2 84 GLY 84 82 82 GLY GLY H A n B 2 85 SER 85 82 82 SER SER H B n B 2 86 LEU 86 82 82 LEU LEU H C n B 2 87 ARG 87 83 83 ARG ARG H . n B 2 88 THR 88 84 84 THR THR H . n B 2 89 GLU 89 85 85 GLU GLU H . n B 2 90 ASP 90 86 86 ASP ASP H . n B 2 91 VAL 91 87 87 VAL VAL H . n B 2 92 ALA 92 88 88 ALA ALA H . n B 2 93 VAL 93 89 89 VAL VAL H . n B 2 94 TYR 94 90 90 TYR TYR H . n B 2 95 TYR 95 91 91 TYR TYR H . n B 2 96 CYS 96 92 92 CYS CYS H . n B 2 97 ALA 97 93 93 ALA ALA H . n B 2 98 ARG 98 94 94 ARG ARG H . n B 2 99 ASP 99 95 95 ASP ASP H . n B 2 100 ARG 100 96 96 ARG ARG H . n B 2 101 TYR 101 97 97 TYR TYR H . n B 2 102 TYR 102 98 98 TYR TYR H . n B 2 103 GLU 103 99 99 GLU GLU H . n B 2 104 THR 104 100 100 THR THR H . n B 2 105 SER 105 100 100 SER SER H A n B 2 106 GLY 106 100 100 GLY GLY H B n B 2 107 SER 107 100 100 SER SER H C n B 2 108 ASN 108 100 100 ASN ASN H D n B 2 109 ALA 109 100 100 ALA ALA H E n B 2 110 PHE 110 100 100 PHE PHE H F n B 2 111 ASP 111 101 101 ASP ASP H . n B 2 112 VAL 112 102 102 VAL VAL H . n B 2 113 TRP 113 103 103 TRP TRP H . n B 2 114 GLY 114 104 104 GLY GLY H . n B 2 115 GLN 115 105 105 GLN GLN H . n B 2 116 GLY 116 106 106 GLY GLY H . n B 2 117 THR 117 107 107 THR THR H . n B 2 118 MET 118 108 108 MET MET H . n B 2 119 VAL 119 109 109 VAL VAL H . n B 2 120 VAL 120 110 110 VAL VAL H . n B 2 121 VAL 121 111 111 VAL VAL H . n B 2 122 SER 122 112 112 SER SER H . n B 2 123 SER 123 113 113 SER SER H . n B 2 124 ALA 124 114 114 ALA ALA H . n B 2 125 SER 125 115 115 SER SER H . n B 2 126 THR 126 116 116 THR THR H . n B 2 127 LYS 127 117 117 LYS LYS H . n B 2 128 GLY 128 118 118 GLY GLY H . n B 2 129 PRO 129 119 119 PRO PRO H . n B 2 130 SER 130 120 120 SER SER H . n B 2 131 VAL 131 121 121 VAL VAL H . n B 2 132 PHE 132 122 122 PHE PHE H . n B 2 133 PRO 133 123 123 PRO PRO H . n B 2 134 LEU 134 124 124 LEU LEU H . n B 2 135 ALA 135 125 125 ALA ALA H . n B 2 136 PRO 136 126 126 PRO PRO H . n B 2 137 CYS 137 127 127 CYS CYS H . n B 2 138 SER 138 130 ? ? ? H . n B 2 139 ARG 139 131 ? ? ? H . n B 2 140 SER 140 132 ? ? ? H . n B 2 141 THR 141 133 ? ? ? H . n B 2 142 SER 142 134 ? ? ? H . n B 2 143 GLU 143 135 ? ? ? H . n B 2 144 SER 144 136 ? ? ? H . n B 2 145 THR 145 137 137 THR THR H . n B 2 146 ALA 146 138 138 ALA ALA H . n B 2 147 ALA 147 139 139 ALA ALA H . n B 2 148 LEU 148 140 140 LEU LEU H . n B 2 149 GLY 149 141 141 GLY GLY H . n B 2 150 CYS 150 142 142 CYS CYS H . n B 2 151 LEU 151 143 143 LEU LEU H . n B 2 152 VAL 152 144 144 VAL VAL H . n B 2 153 LYS 153 145 145 LYS LYS H . n B 2 154 ASP 154 146 146 ASP ASP H . n B 2 155 TYR 155 147 147 TYR TYR H . n B 2 156 PHE 156 148 148 PHE PHE H . n B 2 157 PRO 157 149 149 PRO PRO H . n B 2 158 GLU 158 150 150 GLU GLU H . n B 2 159 PRO 159 151 151 PRO PRO H . n B 2 160 VAL 160 152 152 VAL VAL H . n B 2 161 THR 161 153 153 THR THR H . n B 2 162 VAL 162 154 154 VAL VAL H . n B 2 163 SER 163 156 156 SER SER H . n B 2 164 TRP 164 157 157 TRP TRP H . n B 2 165 ASN 165 162 162 ASN ASN H . n B 2 166 SER 166 163 163 SER SER H . n B 2 167 GLY 167 164 164 GLY GLY H . n B 2 168 ALA 168 165 165 ALA ALA H . n B 2 169 LEU 169 166 166 LEU LEU H . n B 2 170 THR 170 167 167 THR THR H . n B 2 171 SER 171 168 168 SER SER H . n B 2 172 GLY 172 169 169 GLY GLY H . n B 2 173 VAL 173 171 171 VAL VAL H . n B 2 174 HIS 174 172 172 HIS HIS H . n B 2 175 THR 175 173 173 THR THR H . n B 2 176 PHE 176 174 174 PHE PHE H . n B 2 177 PRO 177 175 175 PRO PRO H . n B 2 178 ALA 178 176 176 ALA ALA H . n B 2 179 VAL 179 177 177 VAL VAL H . n B 2 180 LEU 180 178 178 LEU LEU H . n B 2 181 GLN 181 179 179 GLN GLN H . n B 2 182 SER 182 180 180 SER SER H . n B 2 183 SER 183 182 182 SER SER H . n B 2 184 GLY 184 183 183 GLY GLY H . n B 2 185 LEU 185 184 184 LEU LEU H . n B 2 186 TYR 186 185 185 TYR TYR H . n B 2 187 SER 187 186 186 SER SER H . n B 2 188 LEU 188 187 187 LEU LEU H . n B 2 189 SER 189 188 188 SER SER H . n B 2 190 SER 190 189 189 SER SER H . n B 2 191 VAL 191 190 190 VAL VAL H . n B 2 192 VAL 192 191 191 VAL VAL H . n B 2 193 THR 193 192 192 THR THR H . n B 2 194 VAL 194 193 193 VAL VAL H . n B 2 195 PRO 195 194 194 PRO PRO H . n B 2 196 SER 196 195 195 SER SER H . n B 2 197 SER 197 196 ? ? ? H . n B 2 198 ASN 198 197 ? ? ? H . n B 2 199 PHE 199 198 ? ? ? H . n B 2 200 GLY 200 199 ? ? ? H . n B 2 201 THR 201 200 200 THR THR H . n B 2 202 GLN 202 203 203 GLN GLN H . n B 2 203 THR 203 205 205 THR THR H . n B 2 204 TYR 204 206 206 TYR TYR H . n B 2 205 THR 205 207 207 THR THR H . n B 2 206 CYS 206 208 208 CYS CYS H . n B 2 207 ASN 207 209 209 ASN ASN H . n B 2 208 VAL 208 210 210 VAL VAL H . n B 2 209 ASP 209 211 211 ASP ASP H . n B 2 210 HIS 210 212 212 HIS HIS H . n B 2 211 LYS 211 213 213 LYS LYS H . n B 2 212 PRO 212 214 214 PRO PRO H . n B 2 213 SER 213 215 215 SER SER H . n B 2 214 ASN 214 216 216 ASN ASN H . n B 2 215 THR 215 217 217 THR THR H . n B 2 216 LYS 216 218 218 LYS LYS H . n B 2 217 VAL 217 219 219 VAL VAL H . n B 2 218 ASP 218 220 220 ASP ASP H . n B 2 219 LYS 219 221 221 LYS LYS H . n B 2 220 THR 220 222 222 THR THR H . n B 2 221 VAL 221 223 223 VAL VAL H . n B 2 222 GLU 222 226 226 GLU GLU H . n C 3 1 ARG 1 304 304 ARG ARG P . n C 3 2 LYS 2 305 305 LYS LYS P . n C 3 3 ARG 3 306 306 ARG ARG P . n C 3 4 ILE 4 307 307 ILE ILE P . n C 3 5 HIS 5 308 308 HIS HIS P . n C 3 6 ILE 6 309 309 ILE ILE P . n C 3 7 GLY 7 312 312 GLY GLY P . n C 3 8 PRO 8 313 313 PRO PRO P . n C 3 9 GLY 9 314 314 GLY GLY P . n C 3 10 ARG 10 315 315 ARG ARG P . n C 3 11 ALA 11 316 316 ALA ALA P . n C 3 12 PHE 12 317 317 PHE PHE P . n C 3 13 TYR 13 318 318 TYR TYR P . n C 3 14 THR 14 319 319 THR THR P . n C 3 15 THR 15 320 320 THR THR P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 ZN 1 215 215 ZN ZN L . F 5 ZN 1 216 216 ZN ZN L . G 6 CL 1 217 217 CL CL L . H 5 ZN 1 230 227 ZN ZN H . I 5 ZN 1 231 228 ZN ZN H . J 6 CL 1 232 229 CL CL H . K 6 CL 1 233 230 CL CL H . L 6 CL 1 234 231 CL CL H . M 7 HOH 1 218 218 HOH HOH L . M 7 HOH 2 219 219 HOH HOH L . M 7 HOH 3 220 220 HOH HOH L . M 7 HOH 4 221 221 HOH HOH L . M 7 HOH 5 222 222 HOH HOH L . M 7 HOH 6 223 223 HOH HOH L . M 7 HOH 7 224 224 HOH HOH L . M 7 HOH 8 225 225 HOH HOH L . M 7 HOH 9 226 226 HOH HOH L . M 7 HOH 10 227 227 HOH HOH L . N 7 HOH 1 235 232 HOH HOH H . N 7 HOH 2 236 233 HOH HOH H . N 7 HOH 3 237 234 HOH HOH H . N 7 HOH 4 238 235 HOH HOH H . N 7 HOH 5 239 236 HOH HOH H . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 28 _pdbx_struct_mod_residue.auth_asym_id H _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 28 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 6050 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASN 138 ? L ASN 137 ? 1_555 ZN ? E ZN . ? L ZN 215 ? 1_555 OD1 ? A ASN 139 ? L ASN 138 ? 1_555 87.1 ? 2 OD1 ? A ASN 138 ? L ASN 137 ? 1_555 ZN ? E ZN . ? L ZN 215 ? 1_555 NE2 ? B HIS 174 ? H HIS 172 ? 1_555 104.8 ? 3 OD1 ? A ASN 139 ? L ASN 138 ? 1_555 ZN ? E ZN . ? L ZN 215 ? 1_555 NE2 ? B HIS 174 ? H HIS 172 ? 1_555 82.9 ? 4 OD2 ? B ASP 54 ? H ASP 53 ? 1_555 ZN ? H ZN . ? H ZN 230 ? 1_555 OE2 ? B GLU 56 ? H GLU 55 ? 1_555 90.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-01-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_branch_scheme 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_branch 7 3 'Structure model' pdbx_entity_branch_descriptor 8 3 'Structure model' pdbx_entity_branch_link 9 3 'Structure model' pdbx_entity_branch_list 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_struct_assembly_gen 13 3 'Structure model' pdbx_struct_conn_angle 14 3 'Structure model' struct_asym 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_conn_type 17 3 'Structure model' struct_ref_seq 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.name' 15 3 'Structure model' '_chem_comp.type' 16 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 18 3 'Structure model' '_struct_conn.conn_type_id' 19 3 'Structure model' '_struct_conn.id' 20 3 'Structure model' '_struct_conn.pdbx_dist_value' 21 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 3 'Structure model' '_struct_conn.pdbx_role' 23 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 24 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 31 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 37 3 'Structure model' '_struct_conn_type.id' 38 3 'Structure model' '_struct_ref_seq.db_align_end' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -10.9009 3.0485 25.9848 -0.2516 -0.1514 -0.1708 0.0123 0.0101 -0.0494 2.9543 2.7702 5.4218 0.8808 -1.8804 -2.5599 0.0428 0.0601 -0.1030 -0.0818 -0.1133 0.1294 -0.0975 0.0167 -0.2901 'X-RAY DIFFRACTION' 2 ? refined 4.4199 8.3964 59.8482 -0.1531 0.1498 -0.1955 -0.0147 0.0222 -0.0224 5.1708 5.4227 3.2865 2.6269 0.8816 1.3744 0.1312 -0.0537 -0.0776 -0.6968 0.2790 0.0707 0.3497 -0.4898 0.3837 'X-RAY DIFFRACTION' 3 ? refined 5.6259 14.8773 19.5903 -0.1207 -0.2344 -0.1647 0.0550 0.0516 0.0286 2.7427 3.3720 5.5177 0.8293 0.5544 0.7874 -0.0461 0.0147 0.0314 0.0467 -0.0989 -0.3365 0.0444 -0.4065 0.2085 'X-RAY DIFFRACTION' 4 ? refined 15.0778 9.3639 46.9202 -0.2201 -0.0265 -0.1669 -0.0326 0.0118 -0.0453 6.3563 7.6639 4.8375 -0.2790 0.1853 1.0910 -0.0058 -0.0239 0.0297 -0.3195 -0.1007 -0.2747 -0.0528 -0.2904 0.5174 'X-RAY DIFFRACTION' 5 ? refined -6.1855 15.3711 4.8193 0.0911 -0.0246 -0.2376 0.0863 0.0828 0.0501 10.0859 8.0634 14.9233 7.2506 4.1276 -3.1753 0.1826 -0.0663 -0.1163 -0.5112 1.4458 0.6206 -1.1604 -0.4458 0.0937 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 L 1 L 108 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 L 109 L 214 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 H 1 H 123 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 H 124 H 222 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 P 304 P 318 ? . . . . ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 Blu-Ice . ? ? ? ? 'data collection' ? ? ? 3 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 4 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 5 PHASER . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C P GLY 312 ? ? N P PRO 313 ? ? CA P PRO 313 ? ? 140.92 119.30 21.62 1.50 Y 2 1 C P GLY 312 ? ? N P PRO 313 ? ? CD P PRO 313 ? ? 106.54 128.40 -21.86 2.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU L 11 ? ? -170.06 129.80 2 1 SER L 30 ? ? 51.35 -108.07 3 1 ALA L 51 ? ? 68.65 -60.87 4 1 SER L 77 ? ? 60.51 69.77 5 1 ALA L 83 ? ? -62.03 98.49 6 1 ASN L 138 ? ? 37.74 75.67 7 1 ARG H 66 ? ? -136.11 -49.01 8 1 SER H 82 B ? 40.53 72.95 9 1 PRO H 149 ? ? -94.88 -145.50 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H SER 130 ? B SER 138 2 1 Y 1 H ARG 131 ? B ARG 139 3 1 Y 1 H SER 132 ? B SER 140 4 1 Y 1 H THR 133 ? B THR 141 5 1 Y 1 H SER 134 ? B SER 142 6 1 Y 1 H GLU 135 ? B GLU 143 7 1 Y 1 H SER 136 ? B SER 144 8 1 Y 1 H SER 196 ? B SER 197 9 1 Y 1 H ASN 197 ? B ASN 198 10 1 Y 1 H PHE 198 ? B PHE 199 11 1 Y 1 H GLY 199 ? B GLY 200 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 NAG 1 A NAG 1 S NAG 1 n D 4 NAG 2 A NAG 2 S NAG 2 n D 4 BMA 3 A BMA 3 S BMA 3 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 4 3 BMA C1 O1 2 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 NAG 2 n 4 BMA 3 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'ZINC ION' ZN 6 'CHLORIDE ION' CL 7 water HOH #