data_2QSQ # _entry.id 2QSQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2QSQ pdb_00002qsq 10.2210/pdb2qsq/pdb RCSB RCSB044007 ? ? WWPDB D_1000044007 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-01-01 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 2QSQ _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-07-31 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2QST _pdbx_database_related.details ;Structure of the V39C mutant of the N-terminal domain of carcinoembryonic antigen (CEA) ; _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Le Trong, I.' 1 'Korotkova, N.' 2 'Moseley, S.L.' 3 'Stenkamp, R.E.' 4 # _citation.id primary _citation.title 'Binding of Dr adhesins of Escherichia coli to carcinoembryonic antigen triggers receptor dissociation.' _citation.journal_abbrev Mol.Microbiol. _citation.journal_volume 67 _citation.page_first 420 _citation.page_last 434 _citation.year 2008 _citation.journal_id_ASTM MOMIEE _citation.country UK _citation.journal_id_ISSN 0950-382X _citation.journal_id_CSD 2007 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18086185 _citation.pdbx_database_id_DOI 10.1111/j.1365-2958.2007.06054.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Korotkova, N.' 1 ? primary 'Yang, Y.' 2 ? primary 'Le Trong, I.' 3 ? primary 'Cota, E.' 4 ? primary 'Demeler, B.' 5 ? primary 'Marchant, J.' 6 ? primary 'Thomas, W.E.' 7 ? primary 'Stenkamp, R.E.' 8 ? primary 'Moseley, S.L.' 9 ? primary 'Matthews, S.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Carcinoembryonic antigen-related cell adhesion molecule 5' 12430.989 2 ? ? 'N-terminal domain of CEA (UNP residues 34-110)' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 4 water nat water 18.015 193 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Carcinoembryonic antigen, CEA, Meconium antigen 100, CD66e antigen' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AKLTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNII QNDAGFYTLHVIKSDLVNEEATGQFRVYPEL ; _entity_poly.pdbx_seq_one_letter_code_can ;AKLTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNII QNDAGFYTLHVIKSDLVNEEATGQFRVYPEL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 GLYCEROL GOL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LYS n 1 3 LEU n 1 4 THR n 1 5 ILE n 1 6 GLU n 1 7 SER n 1 8 THR n 1 9 PRO n 1 10 PHE n 1 11 ASN n 1 12 VAL n 1 13 ALA n 1 14 GLU n 1 15 GLY n 1 16 LYS n 1 17 GLU n 1 18 VAL n 1 19 LEU n 1 20 LEU n 1 21 LEU n 1 22 VAL n 1 23 HIS n 1 24 ASN n 1 25 LEU n 1 26 PRO n 1 27 GLN n 1 28 HIS n 1 29 LEU n 1 30 PHE n 1 31 GLY n 1 32 TYR n 1 33 SER n 1 34 TRP n 1 35 TYR n 1 36 LYS n 1 37 GLY n 1 38 GLU n 1 39 ARG n 1 40 VAL n 1 41 ASP n 1 42 GLY n 1 43 ASN n 1 44 ARG n 1 45 GLN n 1 46 ILE n 1 47 ILE n 1 48 GLY n 1 49 TYR n 1 50 VAL n 1 51 ILE n 1 52 GLY n 1 53 THR n 1 54 GLN n 1 55 GLN n 1 56 ALA n 1 57 THR n 1 58 PRO n 1 59 GLY n 1 60 PRO n 1 61 ALA n 1 62 TYR n 1 63 SER n 1 64 GLY n 1 65 ARG n 1 66 GLU n 1 67 ILE n 1 68 ILE n 1 69 TYR n 1 70 PRO n 1 71 ASN n 1 72 ALA n 1 73 SER n 1 74 LEU n 1 75 LEU n 1 76 ILE n 1 77 GLN n 1 78 ASN n 1 79 ILE n 1 80 ILE n 1 81 GLN n 1 82 ASN n 1 83 ASP n 1 84 ALA n 1 85 GLY n 1 86 PHE n 1 87 TYR n 1 88 THR n 1 89 LEU n 1 90 HIS n 1 91 VAL n 1 92 ILE n 1 93 LYS n 1 94 SER n 1 95 ASP n 1 96 LEU n 1 97 VAL n 1 98 ASN n 1 99 GLU n 1 100 GLU n 1 101 ALA n 1 102 THR n 1 103 GLY n 1 104 GLN n 1 105 PHE n 1 106 ARG n 1 107 VAL n 1 108 TYR n 1 109 PRO n 1 110 GLU n 1 111 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'CEACAM5, CEA' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-21d _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 0 0 ALA ALA A . n A 1 2 LYS 2 1 1 LYS LYS A . n A 1 3 LEU 3 2 2 LEU LEU A . n A 1 4 THR 4 3 3 THR THR A . n A 1 5 ILE 5 4 4 ILE ILE A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 SER 7 6 6 SER SER A . n A 1 8 THR 8 7 7 THR THR A . n A 1 9 PRO 9 8 8 PRO PRO A . n A 1 10 PHE 10 9 9 PHE PHE A . n A 1 11 ASN 11 10 10 ASN ASN A . n A 1 12 VAL 12 11 11 VAL VAL A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 LYS 16 15 15 LYS LYS A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 LEU 21 20 20 LEU LEU A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 HIS 23 22 22 HIS HIS A . n A 1 24 ASN 24 23 23 ASN ASN A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 PRO 26 25 25 PRO PRO A . n A 1 27 GLN 27 26 26 GLN GLN A . n A 1 28 HIS 28 27 27 HIS HIS A . n A 1 29 LEU 29 28 28 LEU LEU A . n A 1 30 PHE 30 29 29 PHE PHE A . n A 1 31 GLY 31 30 30 GLY GLY A . n A 1 32 TYR 32 31 31 TYR TYR A . n A 1 33 SER 33 32 32 SER SER A . n A 1 34 TRP 34 33 33 TRP TRP A . n A 1 35 TYR 35 34 34 TYR TYR A . n A 1 36 LYS 36 35 35 LYS LYS A . n A 1 37 GLY 37 36 36 GLY GLY A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 ARG 39 38 38 ARG ARG A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 ASP 41 40 40 ASP ASP A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 ASN 43 42 42 ASN ASN A . n A 1 44 ARG 44 43 43 ARG ARG A . n A 1 45 GLN 45 44 44 GLN GLN A . n A 1 46 ILE 46 45 45 ILE ILE A . n A 1 47 ILE 47 46 46 ILE ILE A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 TYR 49 48 48 TYR TYR A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 ILE 51 50 50 ILE ILE A . n A 1 52 GLY 52 51 51 GLY GLY A . n A 1 53 THR 53 52 52 THR THR A . n A 1 54 GLN 54 53 53 GLN GLN A . n A 1 55 GLN 55 54 54 GLN GLN A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 THR 57 56 56 THR THR A . n A 1 58 PRO 58 57 57 PRO PRO A . n A 1 59 GLY 59 58 58 GLY GLY A . n A 1 60 PRO 60 59 59 PRO PRO A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 TYR 62 61 61 TYR TYR A . n A 1 63 SER 63 62 62 SER SER A . n A 1 64 GLY 64 63 63 GLY GLY A . n A 1 65 ARG 65 64 64 ARG ARG A . n A 1 66 GLU 66 65 65 GLU GLU A . n A 1 67 ILE 67 66 66 ILE ILE A . n A 1 68 ILE 68 67 67 ILE ILE A . n A 1 69 TYR 69 68 68 TYR TYR A . n A 1 70 PRO 70 69 69 PRO PRO A . n A 1 71 ASN 71 70 70 ASN ASN A . n A 1 72 ALA 72 71 71 ALA ALA A . n A 1 73 SER 73 72 72 SER SER A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 ILE 76 75 75 ILE ILE A . n A 1 77 GLN 77 76 76 GLN GLN A . n A 1 78 ASN 78 77 77 ASN ASN A . n A 1 79 ILE 79 78 78 ILE ILE A . n A 1 80 ILE 80 79 79 ILE ILE A . n A 1 81 GLN 81 80 80 GLN GLN A . n A 1 82 ASN 82 81 81 ASN ASN A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 ALA 84 83 83 ALA ALA A . n A 1 85 GLY 85 84 84 GLY GLY A . n A 1 86 PHE 86 85 85 PHE PHE A . n A 1 87 TYR 87 86 86 TYR TYR A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 HIS 90 89 89 HIS HIS A . n A 1 91 VAL 91 90 90 VAL VAL A . n A 1 92 ILE 92 91 91 ILE ILE A . n A 1 93 LYS 93 92 92 LYS LYS A . n A 1 94 SER 94 93 93 SER SER A . n A 1 95 ASP 95 94 94 ASP ASP A . n A 1 96 LEU 96 95 95 LEU LEU A . n A 1 97 VAL 97 96 96 VAL VAL A . n A 1 98 ASN 98 97 97 ASN ASN A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 GLU 100 99 99 GLU GLU A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 GLN 104 103 103 GLN GLN A . n A 1 105 PHE 105 104 104 PHE PHE A . n A 1 106 ARG 106 105 105 ARG ARG A . n A 1 107 VAL 107 106 106 VAL VAL A . n A 1 108 TYR 108 107 107 TYR TYR A . n A 1 109 PRO 109 108 108 PRO PRO A . n A 1 110 GLU 110 109 109 GLU GLU A . n A 1 111 LEU 111 110 110 LEU LEU A . n B 1 1 ALA 1 0 0 ALA ALA B . n B 1 2 LYS 2 1 1 LYS LYS B . n B 1 3 LEU 3 2 2 LEU LEU B . n B 1 4 THR 4 3 3 THR THR B . n B 1 5 ILE 5 4 4 ILE ILE B . n B 1 6 GLU 6 5 5 GLU GLU B . n B 1 7 SER 7 6 6 SER SER B . n B 1 8 THR 8 7 7 THR THR B . n B 1 9 PRO 9 8 8 PRO PRO B . n B 1 10 PHE 10 9 9 PHE PHE B . n B 1 11 ASN 11 10 10 ASN ASN B . n B 1 12 VAL 12 11 11 VAL VAL B . n B 1 13 ALA 13 12 12 ALA ALA B . n B 1 14 GLU 14 13 13 GLU GLU B . n B 1 15 GLY 15 14 14 GLY GLY B . n B 1 16 LYS 16 15 15 LYS LYS B . n B 1 17 GLU 17 16 16 GLU GLU B . n B 1 18 VAL 18 17 17 VAL VAL B . n B 1 19 LEU 19 18 18 LEU LEU B . n B 1 20 LEU 20 19 19 LEU LEU B . n B 1 21 LEU 21 20 20 LEU LEU B . n B 1 22 VAL 22 21 21 VAL VAL B . n B 1 23 HIS 23 22 22 HIS HIS B . n B 1 24 ASN 24 23 23 ASN ASN B . n B 1 25 LEU 25 24 24 LEU LEU B . n B 1 26 PRO 26 25 25 PRO PRO B . n B 1 27 GLN 27 26 26 GLN GLN B . n B 1 28 HIS 28 27 27 HIS HIS B . n B 1 29 LEU 29 28 28 LEU LEU B . n B 1 30 PHE 30 29 29 PHE PHE B . n B 1 31 GLY 31 30 30 GLY GLY B . n B 1 32 TYR 32 31 31 TYR TYR B . n B 1 33 SER 33 32 32 SER SER B . n B 1 34 TRP 34 33 33 TRP TRP B . n B 1 35 TYR 35 34 34 TYR TYR B . n B 1 36 LYS 36 35 35 LYS LYS B . n B 1 37 GLY 37 36 36 GLY GLY B . n B 1 38 GLU 38 37 37 GLU GLU B . n B 1 39 ARG 39 38 38 ARG ARG B . n B 1 40 VAL 40 39 39 VAL VAL B . n B 1 41 ASP 41 40 40 ASP ASP B . n B 1 42 GLY 42 41 41 GLY GLY B . n B 1 43 ASN 43 42 42 ASN ASN B . n B 1 44 ARG 44 43 43 ARG ARG B . n B 1 45 GLN 45 44 44 GLN GLN B . n B 1 46 ILE 46 45 45 ILE ILE B . n B 1 47 ILE 47 46 46 ILE ILE B . n B 1 48 GLY 48 47 47 GLY GLY B . n B 1 49 TYR 49 48 48 TYR TYR B . n B 1 50 VAL 50 49 49 VAL VAL B . n B 1 51 ILE 51 50 50 ILE ILE B . n B 1 52 GLY 52 51 51 GLY GLY B . n B 1 53 THR 53 52 52 THR THR B . n B 1 54 GLN 54 53 53 GLN GLN B . n B 1 55 GLN 55 54 54 GLN GLN B . n B 1 56 ALA 56 55 55 ALA ALA B . n B 1 57 THR 57 56 56 THR THR B . n B 1 58 PRO 58 57 57 PRO PRO B . n B 1 59 GLY 59 58 58 GLY GLY B . n B 1 60 PRO 60 59 59 PRO PRO B . n B 1 61 ALA 61 60 60 ALA ALA B . n B 1 62 TYR 62 61 61 TYR TYR B . n B 1 63 SER 63 62 62 SER SER B . n B 1 64 GLY 64 63 63 GLY GLY B . n B 1 65 ARG 65 64 64 ARG ARG B . n B 1 66 GLU 66 65 65 GLU GLU B . n B 1 67 ILE 67 66 66 ILE ILE B . n B 1 68 ILE 68 67 67 ILE ILE B . n B 1 69 TYR 69 68 68 TYR TYR B . n B 1 70 PRO 70 69 69 PRO PRO B . n B 1 71 ASN 71 70 70 ASN ASN B . n B 1 72 ALA 72 71 71 ALA ALA B . n B 1 73 SER 73 72 72 SER SER B . n B 1 74 LEU 74 73 73 LEU LEU B . n B 1 75 LEU 75 74 74 LEU LEU B . n B 1 76 ILE 76 75 75 ILE ILE B . n B 1 77 GLN 77 76 76 GLN GLN B . n B 1 78 ASN 78 77 77 ASN ASN B . n B 1 79 ILE 79 78 78 ILE ILE B . n B 1 80 ILE 80 79 79 ILE ILE B . n B 1 81 GLN 81 80 80 GLN GLN B . n B 1 82 ASN 82 81 81 ASN ASN B . n B 1 83 ASP 83 82 82 ASP ASP B . n B 1 84 ALA 84 83 83 ALA ALA B . n B 1 85 GLY 85 84 84 GLY GLY B . n B 1 86 PHE 86 85 85 PHE PHE B . n B 1 87 TYR 87 86 86 TYR TYR B . n B 1 88 THR 88 87 87 THR THR B . n B 1 89 LEU 89 88 88 LEU LEU B . n B 1 90 HIS 90 89 89 HIS HIS B . n B 1 91 VAL 91 90 90 VAL VAL B . n B 1 92 ILE 92 91 91 ILE ILE B . n B 1 93 LYS 93 92 92 LYS LYS B . n B 1 94 SER 94 93 93 SER SER B . n B 1 95 ASP 95 94 94 ASP ASP B . n B 1 96 LEU 96 95 95 LEU LEU B . n B 1 97 VAL 97 96 96 VAL VAL B . n B 1 98 ASN 98 97 97 ASN ASN B . n B 1 99 GLU 99 98 98 GLU GLU B . n B 1 100 GLU 100 99 99 GLU GLU B . n B 1 101 ALA 101 100 100 ALA ALA B . n B 1 102 THR 102 101 101 THR THR B . n B 1 103 GLY 103 102 102 GLY GLY B . n B 1 104 GLN 104 103 103 GLN GLN B . n B 1 105 PHE 105 104 104 PHE PHE B . n B 1 106 ARG 106 105 105 ARG ARG B . n B 1 107 VAL 107 106 106 VAL VAL B . n B 1 108 TYR 108 107 107 TYR TYR B . n B 1 109 PRO 109 108 108 PRO PRO B . n B 1 110 GLU 110 109 ? ? ? B . n B 1 111 LEU 111 110 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 502 502 CL CL A . D 3 GOL 1 202 202 GOL GOL A . E 3 GOL 1 203 203 GOL GOL A . F 3 GOL 1 204 204 GOL GOL A . G 3 GOL 1 201 201 GOL GOL B . H 2 CL 1 501 501 CL CL B . I 4 HOH 1 304 304 HOH HOH A . I 4 HOH 2 305 305 HOH HOH A . I 4 HOH 3 306 306 HOH HOH A . I 4 HOH 4 307 307 HOH HOH A . I 4 HOH 5 311 311 HOH HOH A . I 4 HOH 6 313 313 HOH HOH A . I 4 HOH 7 314 314 HOH HOH A . I 4 HOH 8 315 315 HOH HOH A . I 4 HOH 9 316 316 HOH HOH A . I 4 HOH 10 317 317 HOH HOH A . I 4 HOH 11 324 324 HOH HOH A . I 4 HOH 12 325 325 HOH HOH A . I 4 HOH 13 326 326 HOH HOH A . I 4 HOH 14 327 327 HOH HOH A . I 4 HOH 15 331 331 HOH HOH A . I 4 HOH 16 332 332 HOH HOH A . I 4 HOH 17 333 333 HOH HOH A . I 4 HOH 18 334 334 HOH HOH A . I 4 HOH 19 335 335 HOH HOH A . I 4 HOH 20 336 336 HOH HOH A . I 4 HOH 21 337 337 HOH HOH A . I 4 HOH 22 338 338 HOH HOH A . I 4 HOH 23 350 350 HOH HOH A . I 4 HOH 24 351 351 HOH HOH A . I 4 HOH 25 352 352 HOH HOH A . I 4 HOH 26 353 353 HOH HOH A . I 4 HOH 27 356 356 HOH HOH A . I 4 HOH 28 357 357 HOH HOH A . I 4 HOH 29 358 358 HOH HOH A . I 4 HOH 30 361 361 HOH HOH A . I 4 HOH 31 362 362 HOH HOH A . I 4 HOH 32 363 363 HOH HOH A . I 4 HOH 33 364 364 HOH HOH A . I 4 HOH 34 365 365 HOH HOH A . I 4 HOH 35 366 366 HOH HOH A . I 4 HOH 36 373 373 HOH HOH A . I 4 HOH 37 374 374 HOH HOH A . I 4 HOH 38 375 375 HOH HOH A . I 4 HOH 39 377 377 HOH HOH A . I 4 HOH 40 378 378 HOH HOH A . I 4 HOH 41 382 382 HOH HOH A . I 4 HOH 42 383 383 HOH HOH A . I 4 HOH 43 384 384 HOH HOH A . I 4 HOH 44 385 385 HOH HOH A . I 4 HOH 45 387 387 HOH HOH A . I 4 HOH 46 388 388 HOH HOH A . I 4 HOH 47 389 389 HOH HOH A . I 4 HOH 48 390 390 HOH HOH A . I 4 HOH 49 391 391 HOH HOH A . I 4 HOH 50 392 392 HOH HOH A . I 4 HOH 51 394 394 HOH HOH A . I 4 HOH 52 396 396 HOH HOH A . I 4 HOH 53 397 397 HOH HOH A . I 4 HOH 54 400 400 HOH HOH A . I 4 HOH 55 402 402 HOH HOH A . I 4 HOH 56 403 403 HOH HOH A . I 4 HOH 57 404 404 HOH HOH A . I 4 HOH 58 405 405 HOH HOH A . I 4 HOH 59 406 406 HOH HOH A . I 4 HOH 60 407 407 HOH HOH A . I 4 HOH 61 414 414 HOH HOH A . I 4 HOH 62 415 415 HOH HOH A . I 4 HOH 63 416 416 HOH HOH A . I 4 HOH 64 417 417 HOH HOH A . I 4 HOH 65 418 418 HOH HOH A . I 4 HOH 66 419 419 HOH HOH A . I 4 HOH 67 423 423 HOH HOH A . I 4 HOH 68 424 424 HOH HOH A . I 4 HOH 69 428 428 HOH HOH A . I 4 HOH 70 429 429 HOH HOH A . I 4 HOH 71 430 430 HOH HOH A . I 4 HOH 72 431 431 HOH HOH A . I 4 HOH 73 432 432 HOH HOH A . I 4 HOH 74 433 433 HOH HOH A . I 4 HOH 75 434 434 HOH HOH A . I 4 HOH 76 435 435 HOH HOH A . I 4 HOH 77 439 439 HOH HOH A . I 4 HOH 78 440 440 HOH HOH A . I 4 HOH 79 441 441 HOH HOH A . I 4 HOH 80 442 442 HOH HOH A . I 4 HOH 81 443 443 HOH HOH A . I 4 HOH 82 444 444 HOH HOH A . I 4 HOH 83 445 445 HOH HOH A . I 4 HOH 84 453 453 HOH HOH A . I 4 HOH 85 454 454 HOH HOH A . I 4 HOH 86 455 455 HOH HOH A . I 4 HOH 87 456 456 HOH HOH A . I 4 HOH 88 457 457 HOH HOH A . I 4 HOH 89 458 458 HOH HOH A . I 4 HOH 90 459 459 HOH HOH A . I 4 HOH 91 460 460 HOH HOH A . I 4 HOH 92 461 461 HOH HOH A . I 4 HOH 93 462 462 HOH HOH A . I 4 HOH 94 463 463 HOH HOH A . I 4 HOH 95 466 466 HOH HOH A . I 4 HOH 96 469 469 HOH HOH A . I 4 HOH 97 473 473 HOH HOH A . I 4 HOH 98 481 481 HOH HOH A . I 4 HOH 99 482 482 HOH HOH A . I 4 HOH 100 491 491 HOH HOH A . I 4 HOH 101 492 492 HOH HOH A . I 4 HOH 102 493 493 HOH HOH A . J 4 HOH 1 301 301 HOH HOH B . J 4 HOH 2 302 302 HOH HOH B . J 4 HOH 3 303 303 HOH HOH B . J 4 HOH 4 308 308 HOH HOH B . J 4 HOH 5 309 309 HOH HOH B . J 4 HOH 6 310 310 HOH HOH B . J 4 HOH 7 312 312 HOH HOH B . J 4 HOH 8 318 318 HOH HOH B . J 4 HOH 9 319 319 HOH HOH B . J 4 HOH 10 320 320 HOH HOH B . J 4 HOH 11 321 321 HOH HOH B . J 4 HOH 12 322 322 HOH HOH B . J 4 HOH 13 323 323 HOH HOH B . J 4 HOH 14 328 328 HOH HOH B . J 4 HOH 15 329 329 HOH HOH B . J 4 HOH 16 330 330 HOH HOH B . J 4 HOH 17 339 339 HOH HOH B . J 4 HOH 18 340 340 HOH HOH B . J 4 HOH 19 341 341 HOH HOH B . J 4 HOH 20 342 342 HOH HOH B . J 4 HOH 21 343 343 HOH HOH B . J 4 HOH 22 344 344 HOH HOH B . J 4 HOH 23 345 345 HOH HOH B . J 4 HOH 24 346 346 HOH HOH B . J 4 HOH 25 347 347 HOH HOH B . J 4 HOH 26 348 348 HOH HOH B . J 4 HOH 27 349 349 HOH HOH B . J 4 HOH 28 354 354 HOH HOH B . J 4 HOH 29 355 355 HOH HOH B . J 4 HOH 30 359 359 HOH HOH B . J 4 HOH 31 360 360 HOH HOH B . J 4 HOH 32 367 367 HOH HOH B . J 4 HOH 33 368 368 HOH HOH B . J 4 HOH 34 369 369 HOH HOH B . J 4 HOH 35 370 370 HOH HOH B . J 4 HOH 36 371 371 HOH HOH B . J 4 HOH 37 372 372 HOH HOH B . J 4 HOH 38 376 376 HOH HOH B . J 4 HOH 39 379 379 HOH HOH B . J 4 HOH 40 380 380 HOH HOH B . J 4 HOH 41 381 381 HOH HOH B . J 4 HOH 42 386 386 HOH HOH B . J 4 HOH 43 393 393 HOH HOH B . J 4 HOH 44 395 395 HOH HOH B . J 4 HOH 45 398 398 HOH HOH B . J 4 HOH 46 399 399 HOH HOH B . J 4 HOH 47 401 401 HOH HOH B . J 4 HOH 48 408 408 HOH HOH B . J 4 HOH 49 409 409 HOH HOH B . J 4 HOH 50 410 410 HOH HOH B . J 4 HOH 51 411 411 HOH HOH B . J 4 HOH 52 412 412 HOH HOH B . J 4 HOH 53 413 413 HOH HOH B . J 4 HOH 54 420 420 HOH HOH B . J 4 HOH 55 421 421 HOH HOH B . J 4 HOH 56 422 422 HOH HOH B . J 4 HOH 57 425 425 HOH HOH B . J 4 HOH 58 426 426 HOH HOH B . J 4 HOH 59 427 427 HOH HOH B . J 4 HOH 60 436 436 HOH HOH B . J 4 HOH 61 437 437 HOH HOH B . J 4 HOH 62 438 438 HOH HOH B . J 4 HOH 63 446 446 HOH HOH B . J 4 HOH 64 447 447 HOH HOH B . J 4 HOH 65 448 448 HOH HOH B . J 4 HOH 66 449 449 HOH HOH B . J 4 HOH 67 450 450 HOH HOH B . J 4 HOH 68 451 451 HOH HOH B . J 4 HOH 69 452 452 HOH HOH B . J 4 HOH 70 464 464 HOH HOH B . J 4 HOH 71 465 465 HOH HOH B . J 4 HOH 72 467 467 HOH HOH B . J 4 HOH 73 468 468 HOH HOH B . J 4 HOH 74 470 470 HOH HOH B . J 4 HOH 75 471 471 HOH HOH B . J 4 HOH 76 472 472 HOH HOH B . J 4 HOH 77 474 474 HOH HOH B . J 4 HOH 78 475 475 HOH HOH B . J 4 HOH 79 476 476 HOH HOH B . J 4 HOH 80 477 477 HOH HOH B . J 4 HOH 81 478 478 HOH HOH B . J 4 HOH 82 479 479 HOH HOH B . J 4 HOH 83 480 480 HOH HOH B . J 4 HOH 84 483 483 HOH HOH B . J 4 HOH 85 484 484 HOH HOH B . J 4 HOH 86 485 485 HOH HOH B . J 4 HOH 87 486 486 HOH HOH B . J 4 HOH 88 487 487 HOH HOH B . J 4 HOH 89 488 488 HOH HOH B . J 4 HOH 90 489 489 HOH HOH B . J 4 HOH 91 490 490 HOH HOH B . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 3 DENZO . ? ? ? ? 'data reduction' ? ? ? 4 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 MOLREP . ? ? ? ? phasing ? ? ? 7 # _cell.length_a 132.531 _cell.length_b 132.531 _cell.length_c 82.762 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 2QSQ _cell.pdbx_unique_axis ? _cell.Z_PDB 18 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'H 3' _symmetry.entry_id 2QSQ _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 146 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 2QSQ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 5.63 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 78.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '3.0 M NaCl, 100 mM Tris-HCl pH 7.0, temperature 277K, VAPOR DIFFUSION' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2006-04-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.1 # _reflns.entry_id 2QSQ _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.95 _reflns.d_resolution_low 50. _reflns.number_all 38912 _reflns.number_obs 38912 _reflns.percent_possible_obs 97.8 _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15. _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.02 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 83.4 _reflns_shell.Rmerge_I_obs 0.802 _reflns_shell.meanI_over_sigI_obs 1. _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.number_unique_all 3283 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2QSQ _refine.ls_d_res_high 1.95 _refine.ls_d_res_low 10.00 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 97.970 _refine.ls_number_reflns_obs 38432 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.181 _refine.ls_R_factor_R_work 0.180 _refine.ls_R_factor_R_free 0.203 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1936 _refine.B_iso_mean 41.014 _refine.aniso_B[1][1] -0.300 _refine.aniso_B[2][2] -0.300 _refine.aniso_B[3][3] 0.460 _refine.aniso_B[1][2] -0.150 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.962 _refine.pdbx_overall_ESU_R 0.096 _refine.pdbx_overall_ESU_R_Free 0.096 _refine.overall_SU_ML 0.073 _refine.overall_SU_B 2.600 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 38432 _refine.ls_R_factor_all 0.181 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1743 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 193 _refine_hist.number_atoms_total 1962 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1888 0.013 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2559 1.340 1.960 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 220 6.215 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 101 36.758 24.752 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 320 14.568 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11 18.371 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 276 0.102 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1447 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 786 0.202 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1277 0.309 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 182 0.157 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 76 0.209 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 15 0.257 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1146 0.834 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1797 1.396 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 863 1.925 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 762 2.902 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.95 _refine_ls_shell.d_res_low 1.999 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 82.640 _refine_ls_shell.number_reflns_R_work 2214 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.288 _refine_ls_shell.R_factor_R_free 0.324 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 123 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2337 _refine_ls_shell.number_reflns_obs 3283 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2QSQ _struct.title 'Crystal structure of the N-terminal domain of carcinoembryonic antigen (CEA)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2QSQ _struct_keywords.text 'cell adhesion, Glycoprotein, GPI-anchor, Immunoglobulin domain, Lipoprotein, Membrane' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 2 ? I N N 4 ? J N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CEAM5_HUMAN _struct_ref.pdbx_db_accession P06731 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AKLTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNII QNDTGFYTLHVIKSDLVNEEATGQFRVYPEL ; _struct_ref.pdbx_align_begin 34 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2QSQ A 1 ? 111 ? P06731 34 ? 144 ? 0 110 2 1 2QSQ B 1 ? 111 ? P06731 34 ? 144 ? 0 110 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2QSQ ALA A 84 ? UNP P06731 THR 117 'SEE REMARK 999' 83 1 2 2QSQ ALA B 84 ? UNP P06731 THR 117 'SEE REMARK 999' 83 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 2610 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 41 ? ASN A 43 ? ASP A 40 ASN A 42 5 ? 3 HELX_P HELX_P2 2 ILE A 80 ? ALA A 84 ? ILE A 79 ALA A 83 5 ? 5 HELX_P HELX_P3 3 ASP B 41 ? ASN B 43 ? ASP B 40 ASN B 42 5 ? 3 HELX_P HELX_P4 4 ILE B 80 ? ALA B 84 ? ILE B 79 ALA B 83 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 8 A . ? THR 7 A PRO 9 A ? PRO 8 A 1 -3.36 2 THR 8 B . ? THR 7 B PRO 9 B ? PRO 8 B 1 -4.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 4 ? THR A 8 ? THR A 3 THR A 7 A 2 VAL A 18 ? HIS A 23 ? VAL A 17 HIS A 22 A 3 LEU A 74 ? ILE A 76 ? LEU A 73 ILE A 75 A 4 GLU A 66 ? ILE A 68 ? GLU A 65 ILE A 67 B 1 ASN A 11 ? ALA A 13 ? ASN A 10 ALA A 12 B 2 GLU A 99 ? TYR A 108 ? GLU A 98 TYR A 107 B 3 GLY A 85 ? LYS A 93 ? GLY A 84 LYS A 92 B 4 LEU A 29 ? LYS A 36 ? LEU A 28 LYS A 35 B 5 GLN A 45 ? VAL A 50 ? GLN A 44 VAL A 49 B 6 GLN A 55 ? PRO A 58 ? GLN A 54 PRO A 57 C 1 THR B 4 ? THR B 8 ? THR B 3 THR B 7 C 2 VAL B 18 ? HIS B 23 ? VAL B 17 HIS B 22 C 3 LEU B 74 ? ILE B 76 ? LEU B 73 ILE B 75 C 4 GLU B 66 ? ILE B 68 ? GLU B 65 ILE B 67 D 1 ASN B 11 ? ALA B 13 ? ASN B 10 ALA B 12 D 2 GLU B 99 ? TYR B 108 ? GLU B 98 TYR B 107 D 3 GLY B 85 ? LYS B 93 ? GLY B 84 LYS B 92 D 4 LEU B 29 ? LYS B 36 ? LEU B 28 LYS B 35 D 5 GLN B 45 ? VAL B 50 ? GLN B 44 VAL B 49 D 6 THR B 57 ? PRO B 58 ? THR B 56 PRO B 57 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 4 ? N THR A 3 O HIS A 23 ? O HIS A 22 A 2 3 N LEU A 20 ? N LEU A 19 O LEU A 74 ? O LEU A 73 A 3 4 O LEU A 75 ? O LEU A 74 N ILE A 67 ? N ILE A 66 B 1 2 N VAL A 12 ? N VAL A 11 O ARG A 106 ? O ARG A 105 B 2 3 O GLU A 99 ? O GLU A 98 N VAL A 91 ? N VAL A 90 B 3 4 O ILE A 92 ? O ILE A 91 N PHE A 30 ? N PHE A 29 B 4 5 N TYR A 32 ? N TYR A 31 O TYR A 49 ? O TYR A 48 B 5 6 N GLY A 48 ? N GLY A 47 O THR A 57 ? O THR A 56 C 1 2 N THR B 4 ? N THR B 3 O HIS B 23 ? O HIS B 22 C 2 3 N LEU B 20 ? N LEU B 19 O LEU B 74 ? O LEU B 73 C 3 4 O LEU B 75 ? O LEU B 74 N ILE B 67 ? N ILE B 66 D 1 2 N VAL B 12 ? N VAL B 11 O ARG B 106 ? O ARG B 105 D 2 3 O GLU B 99 ? O GLU B 98 N VAL B 91 ? N VAL B 90 D 3 4 O ILE B 92 ? O ILE B 91 N PHE B 30 ? N PHE B 29 D 4 5 N TRP B 34 ? N TRP B 33 O ILE B 46 ? O ILE B 45 D 5 6 N GLY B 48 ? N GLY B 47 O THR B 57 ? O THR B 56 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B GOL 201 ? 6 'BINDING SITE FOR RESIDUE GOL B 201' AC2 Software A CL 502 ? 3 'BINDING SITE FOR RESIDUE CL A 502' AC3 Software A GOL 202 ? 7 'BINDING SITE FOR RESIDUE GOL A 202' AC4 Software B CL 501 ? 2 'BINDING SITE FOR RESIDUE CL B 501' AC5 Software A GOL 203 ? 5 'BINDING SITE FOR RESIDUE GOL A 203' AC6 Software A GOL 204 ? 8 'BINDING SITE FOR RESIDUE GOL A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 94 ? SER A 93 . ? 1_555 ? 2 AC1 6 TYR B 49 ? TYR B 48 . ? 1_555 ? 3 AC1 6 VAL B 50 ? VAL B 49 . ? 1_555 ? 4 AC1 6 THR B 53 ? THR B 52 . ? 1_555 ? 5 AC1 6 GLN B 55 ? GLN B 54 . ? 1_555 ? 6 AC1 6 THR B 57 ? THR B 56 . ? 1_555 ? 7 AC2 3 LYS A 36 ? LYS A 35 . ? 1_555 ? 8 AC2 3 PHE A 86 ? PHE A 85 . ? 1_555 ? 9 AC2 3 HOH I . ? HOH A 443 . ? 1_555 ? 10 AC3 7 VAL A 22 ? VAL A 21 . ? 1_555 ? 11 AC3 7 HIS A 23 ? HIS A 22 . ? 1_555 ? 12 AC3 7 ASN A 24 ? ASN A 23 . ? 1_555 ? 13 AC3 7 HOH I . ? HOH A 382 . ? 1_555 ? 14 AC3 7 GLN B 77 ? GLN B 76 . ? 9_554 ? 15 AC3 7 ASN B 78 ? ASN B 77 . ? 9_554 ? 16 AC3 7 HOH J . ? HOH B 480 . ? 9_554 ? 17 AC4 2 LYS B 36 ? LYS B 35 . ? 1_555 ? 18 AC4 2 PHE B 86 ? PHE B 85 . ? 1_555 ? 19 AC5 5 GLU A 17 ? GLU A 16 . ? 1_555 ? 20 AC5 5 HOH I . ? HOH A 311 . ? 1_555 ? 21 AC5 5 TYR B 69 ? TYR B 68 . ? 9_554 ? 22 AC5 5 ASN B 71 ? ASN B 70 . ? 9_554 ? 23 AC5 5 SER B 73 ? SER B 72 . ? 9_554 ? 24 AC6 8 TYR A 62 ? TYR A 61 . ? 1_555 ? 25 AC6 8 GLY A 64 ? GLY A 63 . ? 1_555 ? 26 AC6 8 ARG A 65 ? ARG A 64 . ? 1_555 ? 27 AC6 8 GLU A 66 ? GLU A 65 . ? 1_555 ? 28 AC6 8 GLN A 77 ? GLN A 76 . ? 1_555 ? 29 AC6 8 TYR B 49 ? TYR B 48 . ? 9_554 ? 30 AC6 8 GLY B 52 ? GLY B 51 . ? 9_554 ? 31 AC6 8 THR B 53 ? THR B 52 . ? 9_554 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH1 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 38 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 422 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 71 ? ? 84.23 -7.34 2 1 LEU A 95 ? ? 59.60 18.84 3 1 HIS B 27 ? ? 67.65 73.83 4 1 ALA B 71 ? ? 82.48 -7.98 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;Sequence The sequence was obtained from human cDNA and the authors confirmed that ALA is the correct sequence. However, the authors do not know if it is a mutation introduced by PCR or whether it is an SNP that results in the different amino acid. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLU 109 ? B GLU 110 2 1 Y 1 B LEU 110 ? B LEU 111 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 GOL C1 C N N 124 GOL O1 O N N 125 GOL C2 C N N 126 GOL O2 O N N 127 GOL C3 C N N 128 GOL O3 O N N 129 GOL H11 H N N 130 GOL H12 H N N 131 GOL HO1 H N N 132 GOL H2 H N N 133 GOL HO2 H N N 134 GOL H31 H N N 135 GOL H32 H N N 136 GOL HO3 H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 PHE N N N N 231 PHE CA C N S 232 PHE C C N N 233 PHE O O N N 234 PHE CB C N N 235 PHE CG C Y N 236 PHE CD1 C Y N 237 PHE CD2 C Y N 238 PHE CE1 C Y N 239 PHE CE2 C Y N 240 PHE CZ C Y N 241 PHE OXT O N N 242 PHE H H N N 243 PHE H2 H N N 244 PHE HA H N N 245 PHE HB2 H N N 246 PHE HB3 H N N 247 PHE HD1 H N N 248 PHE HD2 H N N 249 PHE HE1 H N N 250 PHE HE2 H N N 251 PHE HZ H N N 252 PHE HXT H N N 253 PRO N N N N 254 PRO CA C N S 255 PRO C C N N 256 PRO O O N N 257 PRO CB C N N 258 PRO CG C N N 259 PRO CD C N N 260 PRO OXT O N N 261 PRO H H N N 262 PRO HA H N N 263 PRO HB2 H N N 264 PRO HB3 H N N 265 PRO HG2 H N N 266 PRO HG3 H N N 267 PRO HD2 H N N 268 PRO HD3 H N N 269 PRO HXT H N N 270 SER N N N N 271 SER CA C N S 272 SER C C N N 273 SER O O N N 274 SER CB C N N 275 SER OG O N N 276 SER OXT O N N 277 SER H H N N 278 SER H2 H N N 279 SER HA H N N 280 SER HB2 H N N 281 SER HB3 H N N 282 SER HG H N N 283 SER HXT H N N 284 THR N N N N 285 THR CA C N S 286 THR C C N N 287 THR O O N N 288 THR CB C N R 289 THR OG1 O N N 290 THR CG2 C N N 291 THR OXT O N N 292 THR H H N N 293 THR H2 H N N 294 THR HA H N N 295 THR HB H N N 296 THR HG1 H N N 297 THR HG21 H N N 298 THR HG22 H N N 299 THR HG23 H N N 300 THR HXT H N N 301 TRP N N N N 302 TRP CA C N S 303 TRP C C N N 304 TRP O O N N 305 TRP CB C N N 306 TRP CG C Y N 307 TRP CD1 C Y N 308 TRP CD2 C Y N 309 TRP NE1 N Y N 310 TRP CE2 C Y N 311 TRP CE3 C Y N 312 TRP CZ2 C Y N 313 TRP CZ3 C Y N 314 TRP CH2 C Y N 315 TRP OXT O N N 316 TRP H H N N 317 TRP H2 H N N 318 TRP HA H N N 319 TRP HB2 H N N 320 TRP HB3 H N N 321 TRP HD1 H N N 322 TRP HE1 H N N 323 TRP HE3 H N N 324 TRP HZ2 H N N 325 TRP HZ3 H N N 326 TRP HH2 H N N 327 TRP HXT H N N 328 TYR N N N N 329 TYR CA C N S 330 TYR C C N N 331 TYR O O N N 332 TYR CB C N N 333 TYR CG C Y N 334 TYR CD1 C Y N 335 TYR CD2 C Y N 336 TYR CE1 C Y N 337 TYR CE2 C Y N 338 TYR CZ C Y N 339 TYR OH O N N 340 TYR OXT O N N 341 TYR H H N N 342 TYR H2 H N N 343 TYR HA H N N 344 TYR HB2 H N N 345 TYR HB3 H N N 346 TYR HD1 H N N 347 TYR HD2 H N N 348 TYR HE1 H N N 349 TYR HE2 H N N 350 TYR HH H N N 351 TYR HXT H N N 352 VAL N N N N 353 VAL CA C N S 354 VAL C C N N 355 VAL O O N N 356 VAL CB C N N 357 VAL CG1 C N N 358 VAL CG2 C N N 359 VAL OXT O N N 360 VAL H H N N 361 VAL H2 H N N 362 VAL HA H N N 363 VAL HB H N N 364 VAL HG11 H N N 365 VAL HG12 H N N 366 VAL HG13 H N N 367 VAL HG21 H N N 368 VAL HG22 H N N 369 VAL HG23 H N N 370 VAL HXT H N N 371 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 PHE N CA sing N N 218 PHE N H sing N N 219 PHE N H2 sing N N 220 PHE CA C sing N N 221 PHE CA CB sing N N 222 PHE CA HA sing N N 223 PHE C O doub N N 224 PHE C OXT sing N N 225 PHE CB CG sing N N 226 PHE CB HB2 sing N N 227 PHE CB HB3 sing N N 228 PHE CG CD1 doub Y N 229 PHE CG CD2 sing Y N 230 PHE CD1 CE1 sing Y N 231 PHE CD1 HD1 sing N N 232 PHE CD2 CE2 doub Y N 233 PHE CD2 HD2 sing N N 234 PHE CE1 CZ doub Y N 235 PHE CE1 HE1 sing N N 236 PHE CE2 CZ sing Y N 237 PHE CE2 HE2 sing N N 238 PHE CZ HZ sing N N 239 PHE OXT HXT sing N N 240 PRO N CA sing N N 241 PRO N CD sing N N 242 PRO N H sing N N 243 PRO CA C sing N N 244 PRO CA CB sing N N 245 PRO CA HA sing N N 246 PRO C O doub N N 247 PRO C OXT sing N N 248 PRO CB CG sing N N 249 PRO CB HB2 sing N N 250 PRO CB HB3 sing N N 251 PRO CG CD sing N N 252 PRO CG HG2 sing N N 253 PRO CG HG3 sing N N 254 PRO CD HD2 sing N N 255 PRO CD HD3 sing N N 256 PRO OXT HXT sing N N 257 SER N CA sing N N 258 SER N H sing N N 259 SER N H2 sing N N 260 SER CA C sing N N 261 SER CA CB sing N N 262 SER CA HA sing N N 263 SER C O doub N N 264 SER C OXT sing N N 265 SER CB OG sing N N 266 SER CB HB2 sing N N 267 SER CB HB3 sing N N 268 SER OG HG sing N N 269 SER OXT HXT sing N N 270 THR N CA sing N N 271 THR N H sing N N 272 THR N H2 sing N N 273 THR CA C sing N N 274 THR CA CB sing N N 275 THR CA HA sing N N 276 THR C O doub N N 277 THR C OXT sing N N 278 THR CB OG1 sing N N 279 THR CB CG2 sing N N 280 THR CB HB sing N N 281 THR OG1 HG1 sing N N 282 THR CG2 HG21 sing N N 283 THR CG2 HG22 sing N N 284 THR CG2 HG23 sing N N 285 THR OXT HXT sing N N 286 TRP N CA sing N N 287 TRP N H sing N N 288 TRP N H2 sing N N 289 TRP CA C sing N N 290 TRP CA CB sing N N 291 TRP CA HA sing N N 292 TRP C O doub N N 293 TRP C OXT sing N N 294 TRP CB CG sing N N 295 TRP CB HB2 sing N N 296 TRP CB HB3 sing N N 297 TRP CG CD1 doub Y N 298 TRP CG CD2 sing Y N 299 TRP CD1 NE1 sing Y N 300 TRP CD1 HD1 sing N N 301 TRP CD2 CE2 doub Y N 302 TRP CD2 CE3 sing Y N 303 TRP NE1 CE2 sing Y N 304 TRP NE1 HE1 sing N N 305 TRP CE2 CZ2 sing Y N 306 TRP CE3 CZ3 doub Y N 307 TRP CE3 HE3 sing N N 308 TRP CZ2 CH2 doub Y N 309 TRP CZ2 HZ2 sing N N 310 TRP CZ3 CH2 sing Y N 311 TRP CZ3 HZ3 sing N N 312 TRP CH2 HH2 sing N N 313 TRP OXT HXT sing N N 314 TYR N CA sing N N 315 TYR N H sing N N 316 TYR N H2 sing N N 317 TYR CA C sing N N 318 TYR CA CB sing N N 319 TYR CA HA sing N N 320 TYR C O doub N N 321 TYR C OXT sing N N 322 TYR CB CG sing N N 323 TYR CB HB2 sing N N 324 TYR CB HB3 sing N N 325 TYR CG CD1 doub Y N 326 TYR CG CD2 sing Y N 327 TYR CD1 CE1 sing Y N 328 TYR CD1 HD1 sing N N 329 TYR CD2 CE2 doub Y N 330 TYR CD2 HD2 sing N N 331 TYR CE1 CZ doub Y N 332 TYR CE1 HE1 sing N N 333 TYR CE2 CZ sing Y N 334 TYR CE2 HE2 sing N N 335 TYR CZ OH sing N N 336 TYR OH HH sing N N 337 TYR OXT HXT sing N N 338 VAL N CA sing N N 339 VAL N H sing N N 340 VAL N H2 sing N N 341 VAL CA C sing N N 342 VAL CA CB sing N N 343 VAL CA HA sing N N 344 VAL C O doub N N 345 VAL C OXT sing N N 346 VAL CB CG1 sing N N 347 VAL CB CG2 sing N N 348 VAL CB HB sing N N 349 VAL CG1 HG11 sing N N 350 VAL CG1 HG12 sing N N 351 VAL CG1 HG13 sing N N 352 VAL CG2 HG21 sing N N 353 VAL CG2 HG22 sing N N 354 VAL CG2 HG23 sing N N 355 VAL OXT HXT sing N N 356 # _atom_sites.entry_id 2QSQ _atom_sites.fract_transf_matrix[1][1] 0.007545 _atom_sites.fract_transf_matrix[1][2] 0.004356 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008713 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012083 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O # loop_