data_2QSY # _entry.id 2QSY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2QSY RCSB RCSB044015 WWPDB D_1000044015 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2QSZ 'Human nicotinamide riboside kinase 1 in complex with nicotinamide mononucleotide' unspecified PDB 2QT0 'Human nicotinamide riboside kinase 1 in complex with nicotinamide riboside and an ATP analogue' unspecified PDB 2QT1 'Human nicotinamide riboside kinase 1 in complex with nicotinamide riboside' unspecified # _pdbx_database_status.entry_id 2QSY _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-07-31 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rabeh, W.M.' 1 'Tempel, W.' 2 'Nedyalkova, L.' 3 'Landry, R.' 4 'Arrowsmith, C.H.' 5 'Edwards, A.M.' 6 'Sundstrom, M.' 7 'Weigelt, J.' 8 'Bochkarev, A.' 9 'Brenner, C.' 10 'Park, H.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'Nicotinamide Riboside Kinase Structures Reveal New Pathways to NAD(+).' _citation.journal_abbrev 'Plos Biol.' _citation.journal_volume 5 _citation.page_first e263 _citation.page_last e263 _citation.year 2007 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1544-9173 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17914902 _citation.pdbx_database_id_DOI 10.1371/journal.pbio.0050263 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tempel, W.' 1 primary 'Rabeh, W.M.' 2 primary 'Bogan, K.L.' 3 primary 'Belenky, P.' 4 primary 'Wojcik, M.' 5 primary 'Seidle, H.F.' 6 primary 'Nedyalkova, L.' 7 primary 'Yang, T.' 8 primary 'Sauve, A.A.' 9 primary 'Park, H.W.' 10 primary 'Brenner, C.' 11 # _cell.entry_id 2QSY _cell.length_a 54.453 _cell.length_b 142.070 _cell.length_c 62.263 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2QSY _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nicotinamide riboside kinase 1' 24373.371 1 2.7.1.- ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 4 non-polymer syn 'UNKNOWN ATOM OR ION' ? 5 ? ? ? ? 5 water nat water 18.015 66 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGLVPRGSKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVL EALN(MSE)EK(MSE)(MSE)SAISCW(MSE)ESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTIPY EECKRRRSTRVYQPPDSPGYFDGHVWP(MSE)YLKYRQE(MSE)QDITWEVVYLDGTKSEEDLFLQVYEDLIQEL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALN MEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTIPYEECKRRRSTRVYQPPDSPGY FDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQVYEDLIQEL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 LYS n 1 21 THR n 1 22 PHE n 1 23 ILE n 1 24 ILE n 1 25 GLY n 1 26 ILE n 1 27 SER n 1 28 GLY n 1 29 VAL n 1 30 THR n 1 31 ASN n 1 32 SER n 1 33 GLY n 1 34 LYS n 1 35 THR n 1 36 THR n 1 37 LEU n 1 38 ALA n 1 39 LYS n 1 40 ASN n 1 41 LEU n 1 42 GLN n 1 43 LYS n 1 44 HIS n 1 45 LEU n 1 46 PRO n 1 47 ASN n 1 48 CYS n 1 49 SER n 1 50 VAL n 1 51 ILE n 1 52 SER n 1 53 GLN n 1 54 ASP n 1 55 ASP n 1 56 PHE n 1 57 PHE n 1 58 LYS n 1 59 PRO n 1 60 GLU n 1 61 SER n 1 62 GLU n 1 63 ILE n 1 64 GLU n 1 65 THR n 1 66 ASP n 1 67 LYS n 1 68 ASN n 1 69 GLY n 1 70 PHE n 1 71 LEU n 1 72 GLN n 1 73 TYR n 1 74 ASP n 1 75 VAL n 1 76 LEU n 1 77 GLU n 1 78 ALA n 1 79 LEU n 1 80 ASN n 1 81 MSE n 1 82 GLU n 1 83 LYS n 1 84 MSE n 1 85 MSE n 1 86 SER n 1 87 ALA n 1 88 ILE n 1 89 SER n 1 90 CYS n 1 91 TRP n 1 92 MSE n 1 93 GLU n 1 94 SER n 1 95 ALA n 1 96 ARG n 1 97 HIS n 1 98 SER n 1 99 VAL n 1 100 VAL n 1 101 SER n 1 102 THR n 1 103 ASP n 1 104 GLN n 1 105 GLU n 1 106 SER n 1 107 ALA n 1 108 GLU n 1 109 GLU n 1 110 ILE n 1 111 PRO n 1 112 ILE n 1 113 LEU n 1 114 ILE n 1 115 ILE n 1 116 GLU n 1 117 GLY n 1 118 PHE n 1 119 LEU n 1 120 LEU n 1 121 PHE n 1 122 ASN n 1 123 TYR n 1 124 LYS n 1 125 PRO n 1 126 LEU n 1 127 ASP n 1 128 THR n 1 129 ILE n 1 130 TRP n 1 131 ASN n 1 132 ARG n 1 133 SER n 1 134 TYR n 1 135 PHE n 1 136 LEU n 1 137 THR n 1 138 ILE n 1 139 PRO n 1 140 TYR n 1 141 GLU n 1 142 GLU n 1 143 CYS n 1 144 LYS n 1 145 ARG n 1 146 ARG n 1 147 ARG n 1 148 SER n 1 149 THR n 1 150 ARG n 1 151 VAL n 1 152 TYR n 1 153 GLN n 1 154 PRO n 1 155 PRO n 1 156 ASP n 1 157 SER n 1 158 PRO n 1 159 GLY n 1 160 TYR n 1 161 PHE n 1 162 ASP n 1 163 GLY n 1 164 HIS n 1 165 VAL n 1 166 TRP n 1 167 PRO n 1 168 MSE n 1 169 TYR n 1 170 LEU n 1 171 LYS n 1 172 TYR n 1 173 ARG n 1 174 GLN n 1 175 GLU n 1 176 MSE n 1 177 GLN n 1 178 ASP n 1 179 ILE n 1 180 THR n 1 181 TRP n 1 182 GLU n 1 183 VAL n 1 184 VAL n 1 185 TYR n 1 186 LEU n 1 187 ASP n 1 188 GLY n 1 189 THR n 1 190 LYS n 1 191 SER n 1 192 GLU n 1 193 GLU n 1 194 ASP n 1 195 LEU n 1 196 PHE n 1 197 LEU n 1 198 GLN n 1 199 VAL n 1 200 TYR n 1 201 GLU n 1 202 ASP n 1 203 LEU n 1 204 ILE n 1 205 GLN n 1 206 GLU n 1 207 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'NRK1, C9orf95' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) codon plus RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p28a-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NRK1_HUMAN _struct_ref.pdbx_db_accession Q9NWW6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALNMEKMMSAISCWMESARHSV VSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDI TWEVVYLDGTKSEEDLFLQVYEDLIQEL ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2QSY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 207 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NWW6 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 189 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 189 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2QSY MSE A 1 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -17 1 1 2QSY GLY A 2 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -16 2 1 2QSY SER A 3 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -15 3 1 2QSY SER A 4 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -14 4 1 2QSY HIS A 5 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -13 5 1 2QSY HIS A 6 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -12 6 1 2QSY HIS A 7 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -11 7 1 2QSY HIS A 8 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -10 8 1 2QSY HIS A 9 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -9 9 1 2QSY HIS A 10 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -8 10 1 2QSY SER A 11 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -7 11 1 2QSY SER A 12 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -6 12 1 2QSY GLY A 13 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -5 13 1 2QSY LEU A 14 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -4 14 1 2QSY VAL A 15 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -3 15 1 2QSY PRO A 16 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -2 16 1 2QSY ARG A 17 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' -1 17 1 2QSY GLY A 18 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' 0 18 1 2QSY SER A 19 ? UNP Q9NWW6 ? ? 'EXPRESSION TAG' 1 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2QSY _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 50.21 _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details ;20% PEG 3350, 0.2M Sodium phosphate monobasic, 0.15M D(+)sucrose, 0.1M HEPES, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-11-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_wavelength_list 0.97931 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID # _reflns.entry_id 2QSY _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 50.000 _reflns.number_obs 19430 _reflns.pdbx_Rmerge_I_obs 0.122 _reflns.pdbx_netI_over_sigmaI 6.400 _reflns.pdbx_chi_squared 1.512 _reflns.pdbx_redundancy 6.900 _reflns.percent_possible_obs 99.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.90 1.97 ? ? ? 0.709 ? ? 1.951 5.40 ? 1857 96.60 ? 1 1.97 2.05 ? ? ? 0.570 ? ? 0.834 6.50 ? 1894 99.70 ? 2 2.05 2.14 ? ? ? 0.468 ? ? 1.745 6.80 ? 1919 99.70 ? 3 2.14 2.25 ? ? ? 0.344 ? ? 1.233 7.10 ? 1928 99.80 ? 4 2.25 2.39 ? ? ? 0.266 ? ? 1.228 7.30 ? 1939 100.00 ? 5 2.39 2.58 ? ? ? 0.175 ? ? 1.004 7.30 ? 1923 100.00 ? 6 2.58 2.84 ? ? ? 0.127 ? ? 0.956 7.30 ? 1959 100.00 ? 7 2.84 3.25 ? ? ? 0.085 ? ? 1.206 7.30 ? 1948 100.00 ? 8 3.25 4.09 ? ? ? 0.070 ? ? 1.991 7.20 ? 1976 100.00 ? 9 4.09 50.00 ? ? ? 0.061 ? ? 3.032 6.80 ? 2087 99.80 ? 10 # _refine.entry_id 2QSY _refine.ls_d_res_high 1.950 _refine.ls_d_res_low 28.510 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.780 _refine.ls_number_reflns_obs 17990 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. Coot, arp/warp, molprobity programs have also been used in refinement' _refine.ls_R_factor_all 0.222 _refine.ls_R_factor_R_work 0.219 _refine.ls_wR_factor_R_work 0.197 _refine.ls_R_factor_R_free 0.263 _refine.ls_wR_factor_R_free 0.234 _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 933 _refine.B_iso_mean 18.786 _refine.aniso_B[1][1] 0.250 _refine.aniso_B[2][2] -0.040 _refine.aniso_B[3][3] -0.210 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.932 _refine.correlation_coeff_Fo_to_Fc_free 0.894 _refine.pdbx_overall_ESU_R 0.167 _refine.pdbx_overall_ESU_R_Free 0.159 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.222 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1480 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 66 _refine_hist.number_atoms_total 1579 _refine_hist.d_res_high 1.950 _refine_hist.d_res_low 28.510 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1550 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1038 0.000 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2116 1.460 1.982 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2537 4.148 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 186 5.479 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 71 30.986 24.366 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 263 13.731 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7 17.760 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 232 0.082 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1688 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 318 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 289 0.203 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 941 0.229 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 713 0.181 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 652 0.108 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 64 0.149 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 1 0.000 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 8 0.149 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 35 0.210 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 14 0.162 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 912 2.531 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 362 0.000 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1490 3.562 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 638 2.604 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 622 3.409 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id 20 2.000 1.950 1315 98.859 1226 0.330 74 0.418 . . . . . 'X-RAY DIFFRACTION' 20 2.055 2.000 1271 99.528 1215 0.297 50 0.321 . . . . . 'X-RAY DIFFRACTION' 20 2.114 2.055 1230 99.675 1157 0.268 69 0.326 . . . . . 'X-RAY DIFFRACTION' 20 2.179 2.114 1214 99.918 1147 0.239 66 0.264 . . . . . 'X-RAY DIFFRACTION' 20 2.250 2.179 1157 99.395 1090 0.267 60 0.290 . . . . . 'X-RAY DIFFRACTION' 20 2.328 2.250 1130 99.823 1067 0.249 61 0.319 . . . . . 'X-RAY DIFFRACTION' 20 2.416 2.328 1089 100.000 1039 0.199 50 0.321 . . . . . 'X-RAY DIFFRACTION' 20 2.514 2.416 1074 100.000 1012 0.205 62 0.254 . . . . . 'X-RAY DIFFRACTION' 20 2.624 2.514 1009 100.000 948 0.217 61 0.271 . . . . . 'X-RAY DIFFRACTION' 20 2.751 2.624 967 100.000 915 0.220 52 0.284 . . . . . 'X-RAY DIFFRACTION' 20 2.899 2.751 938 100.000 892 0.219 46 0.244 . . . . . 'X-RAY DIFFRACTION' 20 3.073 2.899 882 100.000 825 0.209 57 0.219 . . . . . 'X-RAY DIFFRACTION' 20 3.282 3.073 830 100.000 785 0.202 45 0.232 . . . . . 'X-RAY DIFFRACTION' 20 3.541 3.282 772 100.000 732 0.208 40 0.262 . . . . . 'X-RAY DIFFRACTION' 20 3.873 3.541 725 100.000 686 0.194 39 0.202 . . . . . 'X-RAY DIFFRACTION' 20 4.320 3.873 659 100.000 629 0.167 30 0.258 . . . . . 'X-RAY DIFFRACTION' 20 4.970 4.320 587 100.000 559 0.161 28 0.173 . . . . . 'X-RAY DIFFRACTION' 20 6.041 4.970 507 100.000 489 0.223 18 0.270 . . . . . 'X-RAY DIFFRACTION' 20 8.357 6.041 410 100.000 393 0.287 17 0.245 . . . . . 'X-RAY DIFFRACTION' 20 28.513 8.357 263 98.479 251 0.254 8 0.502 . . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 2QSY _struct.title 'Human nicotinamide riboside kinase 1 in complex with ADP' _struct.pdbx_descriptor 'Nicotinamide riboside kinase 1 (E.C.2.7.1.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2QSY _struct_keywords.text ;non-protein kinase, NAD+, nicotinamide riboside, nrk1, nicotinamide riboside kinase activity, nicotinic acid riboside kinase activity, NAD biosynthesis, ADP, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, Alternative splicing, ATP-binding, Nucleotide-binding, Pyridine nucleotide biosynthesis, Transferase ; _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? # _struct_biol.id 1 _struct_biol.details 'not known' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 33 ? LEU A 45 ? GLY A 15 LEU A 27 1 ? 13 HELX_P HELX_P2 2 ASP A 54 ? PHE A 57 ? ASP A 36 PHE A 39 5 ? 4 HELX_P HELX_P3 3 PRO A 59 ? ILE A 63 ? PRO A 41 ILE A 45 5 ? 5 HELX_P HELX_P4 4 VAL A 75 ? LEU A 79 ? VAL A 57 LEU A 61 5 ? 5 HELX_P HELX_P5 5 ASN A 80 ? ARG A 96 ? ASN A 62 ARG A 78 1 ? 17 HELX_P HELX_P6 6 TYR A 123 ? ASP A 127 ? TYR A 105 ASP A 109 5 ? 5 HELX_P HELX_P7 7 PRO A 139 ? ARG A 150 ? PRO A 121 ARG A 132 1 ? 12 HELX_P HELX_P8 8 GLY A 159 ? HIS A 164 ? GLY A 141 HIS A 146 1 ? 6 HELX_P HELX_P9 9 HIS A 164 ? MSE A 176 ? HIS A 146 MSE A 158 1 ? 13 HELX_P HELX_P10 10 GLN A 177 ? ILE A 179 ? GLN A 159 ILE A 161 5 ? 3 HELX_P HELX_P11 11 SER A 191 ? LEU A 207 ? SER A 173 LEU A 189 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A THR 35 OG1 ? ? ? 1_555 B MG . MG ? ? A THR 17 A MG 1102 1_555 ? ? ? ? ? ? ? 2.289 ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 1102 A HOH 1110 1_555 ? ? ? ? ? ? ? 1.990 ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 1102 A HOH 1173 1_555 ? ? ? ? ? ? ? 2.178 ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C ADP . O2B ? ? A MG 1102 A ADP 1101 1_555 ? ? ? ? ? ? ? 2.279 ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 1102 A HOH 1108 1_555 ? ? ? ? ? ? ? 2.135 ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 1102 A HOH 1109 1_555 ? ? ? ? ? ? ? 2.329 ? covale1 covale ? ? A ASN 80 C ? ? ? 1_555 A MSE 81 N ? ? A ASN 62 A MSE 63 1_555 ? ? ? ? ? ? ? 1.332 ? covale2 covale ? ? A MSE 81 C ? ? ? 1_555 A GLU 82 N ? ? A MSE 63 A GLU 64 1_555 ? ? ? ? ? ? ? 1.333 ? covale3 covale ? ? A LYS 83 C ? ? ? 1_555 A MSE 84 N ? ? A LYS 65 A MSE 66 1_555 ? ? ? ? ? ? ? 1.338 ? covale4 covale ? ? A MSE 84 C ? ? ? 1_555 A MSE 85 N ? ? A MSE 66 A MSE 67 1_555 ? ? ? ? ? ? ? 1.322 ? covale5 covale ? ? A MSE 85 C ? ? ? 1_555 A SER 86 N ? ? A MSE 67 A SER 68 1_555 ? ? ? ? ? ? ? 1.324 ? covale6 covale ? ? A TRP 91 C ? ? ? 1_555 A MSE 92 N ? ? A TRP 73 A MSE 74 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A MSE 92 C ? ? ? 1_555 A GLU 93 N ? ? A MSE 74 A GLU 75 1_555 ? ? ? ? ? ? ? 1.330 ? covale8 covale ? ? A PRO 167 C ? ? ? 1_555 A MSE 168 N ? ? A PRO 149 A MSE 150 1_555 ? ? ? ? ? ? ? 1.329 ? covale9 covale ? ? A MSE 168 C ? ? ? 1_555 A TYR 169 N ? ? A MSE 150 A TYR 151 1_555 ? ? ? ? ? ? ? 1.324 ? covale10 covale ? ? A GLU 175 C ? ? ? 1_555 A MSE 176 N ? ? A GLU 157 A MSE 158 1_555 ? ? ? ? ? ? ? 1.341 ? covale11 covale ? ? A MSE 176 C ? ? ? 1_555 A GLN 177 N ? ? A MSE 158 A GLN 159 1_555 ? ? ? ? ? ? ? 1.334 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 153 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 135 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 154 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 136 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.64 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 48 ? SER A 52 ? CYS A 30 SER A 34 A 2 ILE A 112 ? GLU A 116 ? ILE A 94 GLU A 98 A 3 PHE A 22 ? GLY A 28 ? PHE A 4 GLY A 10 A 4 ARG A 132 ? THR A 137 ? ARG A 114 THR A 119 A 5 VAL A 184 ? ASP A 187 ? VAL A 166 ASP A 169 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 51 ? N ILE A 33 O ILE A 114 ? O ILE A 96 A 2 3 O ILE A 115 ? O ILE A 97 N ILE A 24 ? N ILE A 6 A 3 4 N SER A 27 ? N SER A 9 O TYR A 134 ? O TYR A 116 A 4 5 N SER A 133 ? N SER A 115 O VAL A 184 ? O VAL A 166 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MG A 1102' AC2 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE ADP A 1101' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE UNX A 1103' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE UNX A 1104' AC5 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE UNX A 1105' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE UNX A 1106' AC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE UNX A 1107' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 THR A 35 ? THR A 17 . ? 1_555 ? 2 AC1 6 ADP C . ? ADP A 1101 . ? 1_555 ? 3 AC1 6 HOH I . ? HOH A 1108 . ? 1_555 ? 4 AC1 6 HOH I . ? HOH A 1109 . ? 1_555 ? 5 AC1 6 HOH I . ? HOH A 1110 . ? 1_555 ? 6 AC1 6 HOH I . ? HOH A 1173 . ? 1_555 ? 7 AC2 17 ASN A 31 ? ASN A 13 . ? 1_555 ? 8 AC2 17 SER A 32 ? SER A 14 . ? 1_555 ? 9 AC2 17 GLY A 33 ? GLY A 15 . ? 1_555 ? 10 AC2 17 LYS A 34 ? LYS A 16 . ? 1_555 ? 11 AC2 17 THR A 35 ? THR A 17 . ? 1_555 ? 12 AC2 17 THR A 36 ? THR A 18 . ? 1_555 ? 13 AC2 17 ARG A 146 ? ARG A 128 . ? 1_555 ? 14 AC2 17 ARG A 150 ? ARG A 132 . ? 1_555 ? 15 AC2 17 LYS A 190 ? LYS A 172 . ? 1_555 ? 16 AC2 17 SER A 191 ? SER A 173 . ? 1_555 ? 17 AC2 17 GLU A 192 ? GLU A 174 . ? 1_555 ? 18 AC2 17 LEU A 195 ? LEU A 177 . ? 1_555 ? 19 AC2 17 MG B . ? MG A 1102 . ? 1_555 ? 20 AC2 17 HOH I . ? HOH A 1108 . ? 1_555 ? 21 AC2 17 HOH I . ? HOH A 1109 . ? 1_555 ? 22 AC2 17 HOH I . ? HOH A 1110 . ? 1_555 ? 23 AC2 17 HOH I . ? HOH A 1148 . ? 1_555 ? 24 AC3 3 LEU A 37 ? LEU A 19 . ? 1_555 ? 25 AC3 3 ASN A 40 ? ASN A 22 . ? 1_555 ? 26 AC3 3 GLU A 192 ? GLU A 174 . ? 1_555 ? 27 AC4 1 LEU A 71 ? LEU A 53 . ? 1_555 ? 28 AC5 2 LEU A 76 ? LEU A 58 . ? 1_555 ? 29 AC5 2 LEU A 79 ? LEU A 61 . ? 1_555 ? 30 AC6 2 ASP A 127 ? ASP A 109 . ? 1_555 ? 31 AC6 2 TRP A 130 ? TRP A 112 . ? 1_555 ? 32 AC7 4 LEU A 186 ? LEU A 168 . ? 1_555 ? 33 AC7 4 ASP A 187 ? ASP A 169 . ? 1_555 ? 34 AC7 4 LYS A 190 ? LYS A 172 . ? 1_555 ? 35 AC7 4 GLN A 198 ? GLN A 180 . ? 1_555 ? # _atom_sites.entry_id 2QSY _atom_sites.fract_transf_matrix[1][1] 0.01836 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.00704 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.01606 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S SE X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -17 ? ? ? A . n A 1 2 GLY 2 -16 ? ? ? A . n A 1 3 SER 3 -15 ? ? ? A . n A 1 4 SER 4 -14 ? ? ? A . n A 1 5 HIS 5 -13 ? ? ? A . n A 1 6 HIS 6 -12 ? ? ? A . n A 1 7 HIS 7 -11 ? ? ? A . n A 1 8 HIS 8 -10 ? ? ? A . n A 1 9 HIS 9 -9 ? ? ? A . n A 1 10 HIS 10 -8 ? ? ? A . n A 1 11 SER 11 -7 ? ? ? A . n A 1 12 SER 12 -6 ? ? ? A . n A 1 13 GLY 13 -5 ? ? ? A . n A 1 14 LEU 14 -4 ? ? ? A . n A 1 15 VAL 15 -3 ? ? ? A . n A 1 16 PRO 16 -2 ? ? ? A . n A 1 17 ARG 17 -1 ? ? ? A . n A 1 18 GLY 18 0 ? ? ? A . n A 1 19 SER 19 1 1 SER SER A . n A 1 20 LYS 20 2 2 LYS LYS A . n A 1 21 THR 21 3 3 THR THR A . n A 1 22 PHE 22 4 4 PHE PHE A . n A 1 23 ILE 23 5 5 ILE ILE A . n A 1 24 ILE 24 6 6 ILE ILE A . n A 1 25 GLY 25 7 7 GLY GLY A . n A 1 26 ILE 26 8 8 ILE ILE A . n A 1 27 SER 27 9 9 SER SER A . n A 1 28 GLY 28 10 10 GLY GLY A . n A 1 29 VAL 29 11 11 VAL VAL A . n A 1 30 THR 30 12 12 THR THR A . n A 1 31 ASN 31 13 13 ASN ASN A . n A 1 32 SER 32 14 14 SER SER A . n A 1 33 GLY 33 15 15 GLY GLY A . n A 1 34 LYS 34 16 16 LYS LYS A . n A 1 35 THR 35 17 17 THR THR A . n A 1 36 THR 36 18 18 THR THR A . n A 1 37 LEU 37 19 19 LEU LEU A . n A 1 38 ALA 38 20 20 ALA ALA A . n A 1 39 LYS 39 21 21 LYS LYS A . n A 1 40 ASN 40 22 22 ASN ASN A . n A 1 41 LEU 41 23 23 LEU LEU A . n A 1 42 GLN 42 24 24 GLN GLN A . n A 1 43 LYS 43 25 25 LYS LYS A . n A 1 44 HIS 44 26 26 HIS HIS A . n A 1 45 LEU 45 27 27 LEU LEU A . n A 1 46 PRO 46 28 28 PRO PRO A . n A 1 47 ASN 47 29 29 ASN ASN A . n A 1 48 CYS 48 30 30 CYS CYS A . n A 1 49 SER 49 31 31 SER SER A . n A 1 50 VAL 50 32 32 VAL VAL A . n A 1 51 ILE 51 33 33 ILE ILE A . n A 1 52 SER 52 34 34 SER SER A . n A 1 53 GLN 53 35 35 GLN GLN A . n A 1 54 ASP 54 36 36 ASP ASP A . n A 1 55 ASP 55 37 37 ASP ASP A . n A 1 56 PHE 56 38 38 PHE PHE A . n A 1 57 PHE 57 39 39 PHE PHE A . n A 1 58 LYS 58 40 40 LYS LYS A . n A 1 59 PRO 59 41 41 PRO PRO A . n A 1 60 GLU 60 42 42 GLU GLU A . n A 1 61 SER 61 43 43 SER SER A . n A 1 62 GLU 62 44 44 GLU GLU A . n A 1 63 ILE 63 45 45 ILE ILE A . n A 1 64 GLU 64 46 46 GLU GLU A . n A 1 65 THR 65 47 47 THR THR A . n A 1 66 ASP 66 48 48 ASP ASP A . n A 1 67 LYS 67 49 49 LYS LYS A . n A 1 68 ASN 68 50 50 ASN ASN A . n A 1 69 GLY 69 51 51 GLY GLY A . n A 1 70 PHE 70 52 52 PHE PHE A . n A 1 71 LEU 71 53 53 LEU LEU A . n A 1 72 GLN 72 54 54 GLN GLN A . n A 1 73 TYR 73 55 55 TYR TYR A . n A 1 74 ASP 74 56 56 ASP ASP A . n A 1 75 VAL 75 57 57 VAL VAL A . n A 1 76 LEU 76 58 58 LEU LEU A . n A 1 77 GLU 77 59 59 GLU GLU A . n A 1 78 ALA 78 60 60 ALA ALA A . n A 1 79 LEU 79 61 61 LEU LEU A . n A 1 80 ASN 80 62 62 ASN ASN A . n A 1 81 MSE 81 63 63 MSE MSE A . n A 1 82 GLU 82 64 64 GLU GLU A . n A 1 83 LYS 83 65 65 LYS LYS A . n A 1 84 MSE 84 66 66 MSE MSE A . n A 1 85 MSE 85 67 67 MSE MSE A . n A 1 86 SER 86 68 68 SER SER A . n A 1 87 ALA 87 69 69 ALA ALA A . n A 1 88 ILE 88 70 70 ILE ILE A . n A 1 89 SER 89 71 71 SER SER A . n A 1 90 CYS 90 72 72 CYS CYS A . n A 1 91 TRP 91 73 73 TRP TRP A . n A 1 92 MSE 92 74 74 MSE MSE A . n A 1 93 GLU 93 75 75 GLU GLU A . n A 1 94 SER 94 76 76 SER SER A . n A 1 95 ALA 95 77 77 ALA ALA A . n A 1 96 ARG 96 78 78 ARG ARG A . n A 1 97 HIS 97 79 79 HIS HIS A . n A 1 98 SER 98 80 80 SER SER A . n A 1 99 VAL 99 81 81 VAL VAL A . n A 1 100 VAL 100 82 82 VAL VAL A . n A 1 101 SER 101 83 ? ? ? A . n A 1 102 THR 102 84 ? ? ? A . n A 1 103 ASP 103 85 ? ? ? A . n A 1 104 GLN 104 86 ? ? ? A . n A 1 105 GLU 105 87 ? ? ? A . n A 1 106 SER 106 88 ? ? ? A . n A 1 107 ALA 107 89 ? ? ? A . n A 1 108 GLU 108 90 ? ? ? A . n A 1 109 GLU 109 91 ? ? ? A . n A 1 110 ILE 110 92 92 ILE ILE A . n A 1 111 PRO 111 93 93 PRO PRO A . n A 1 112 ILE 112 94 94 ILE ILE A . n A 1 113 LEU 113 95 95 LEU LEU A . n A 1 114 ILE 114 96 96 ILE ILE A . n A 1 115 ILE 115 97 97 ILE ILE A . n A 1 116 GLU 116 98 98 GLU GLU A . n A 1 117 GLY 117 99 99 GLY GLY A . n A 1 118 PHE 118 100 100 PHE PHE A . n A 1 119 LEU 119 101 101 LEU LEU A . n A 1 120 LEU 120 102 102 LEU LEU A . n A 1 121 PHE 121 103 103 PHE PHE A . n A 1 122 ASN 122 104 104 ASN ASN A . n A 1 123 TYR 123 105 105 TYR TYR A . n A 1 124 LYS 124 106 106 LYS LYS A . n A 1 125 PRO 125 107 107 PRO PRO A . n A 1 126 LEU 126 108 108 LEU LEU A . n A 1 127 ASP 127 109 109 ASP ASP A . n A 1 128 THR 128 110 110 THR THR A . n A 1 129 ILE 129 111 111 ILE ILE A . n A 1 130 TRP 130 112 112 TRP TRP A . n A 1 131 ASN 131 113 113 ASN ASN A . n A 1 132 ARG 132 114 114 ARG ARG A . n A 1 133 SER 133 115 115 SER SER A . n A 1 134 TYR 134 116 116 TYR TYR A . n A 1 135 PHE 135 117 117 PHE PHE A . n A 1 136 LEU 136 118 118 LEU LEU A . n A 1 137 THR 137 119 119 THR THR A . n A 1 138 ILE 138 120 120 ILE ILE A . n A 1 139 PRO 139 121 121 PRO PRO A . n A 1 140 TYR 140 122 122 TYR TYR A . n A 1 141 GLU 141 123 123 GLU GLU A . n A 1 142 GLU 142 124 124 GLU GLU A . n A 1 143 CYS 143 125 125 CYS CYS A . n A 1 144 LYS 144 126 126 LYS LYS A . n A 1 145 ARG 145 127 127 ARG ARG A . n A 1 146 ARG 146 128 128 ARG ARG A . n A 1 147 ARG 147 129 129 ARG ARG A . n A 1 148 SER 148 130 130 SER SER A . n A 1 149 THR 149 131 131 THR THR A . n A 1 150 ARG 150 132 132 ARG ARG A . n A 1 151 VAL 151 133 133 VAL VAL A . n A 1 152 TYR 152 134 134 TYR TYR A . n A 1 153 GLN 153 135 135 GLN GLN A . n A 1 154 PRO 154 136 136 PRO PRO A . n A 1 155 PRO 155 137 137 PRO PRO A . n A 1 156 ASP 156 138 138 ASP ASP A . n A 1 157 SER 157 139 139 SER SER A . n A 1 158 PRO 158 140 140 PRO PRO A . n A 1 159 GLY 159 141 141 GLY GLY A . n A 1 160 TYR 160 142 142 TYR TYR A . n A 1 161 PHE 161 143 143 PHE PHE A . n A 1 162 ASP 162 144 144 ASP ASP A . n A 1 163 GLY 163 145 145 GLY GLY A . n A 1 164 HIS 164 146 146 HIS HIS A . n A 1 165 VAL 165 147 147 VAL VAL A . n A 1 166 TRP 166 148 148 TRP TRP A . n A 1 167 PRO 167 149 149 PRO PRO A . n A 1 168 MSE 168 150 150 MSE MSE A . n A 1 169 TYR 169 151 151 TYR TYR A . n A 1 170 LEU 170 152 152 LEU LEU A . n A 1 171 LYS 171 153 153 LYS LYS A . n A 1 172 TYR 172 154 154 TYR TYR A . n A 1 173 ARG 173 155 155 ARG ARG A . n A 1 174 GLN 174 156 156 GLN GLN A . n A 1 175 GLU 175 157 157 GLU GLU A . n A 1 176 MSE 176 158 158 MSE MSE A . n A 1 177 GLN 177 159 159 GLN GLN A . n A 1 178 ASP 178 160 160 ASP ASP A . n A 1 179 ILE 179 161 161 ILE ILE A . n A 1 180 THR 180 162 162 THR THR A . n A 1 181 TRP 181 163 163 TRP TRP A . n A 1 182 GLU 182 164 164 GLU GLU A . n A 1 183 VAL 183 165 165 VAL VAL A . n A 1 184 VAL 184 166 166 VAL VAL A . n A 1 185 TYR 185 167 167 TYR TYR A . n A 1 186 LEU 186 168 168 LEU LEU A . n A 1 187 ASP 187 169 169 ASP ASP A . n A 1 188 GLY 188 170 170 GLY GLY A . n A 1 189 THR 189 171 171 THR THR A . n A 1 190 LYS 190 172 172 LYS LYS A . n A 1 191 SER 191 173 173 SER SER A . n A 1 192 GLU 192 174 174 GLU GLU A . n A 1 193 GLU 193 175 175 GLU GLU A . n A 1 194 ASP 194 176 176 ASP ASP A . n A 1 195 LEU 195 177 177 LEU LEU A . n A 1 196 PHE 196 178 178 PHE PHE A . n A 1 197 LEU 197 179 179 LEU LEU A . n A 1 198 GLN 198 180 180 GLN GLN A . n A 1 199 VAL 199 181 181 VAL VAL A . n A 1 200 TYR 200 182 182 TYR TYR A . n A 1 201 GLU 201 183 183 GLU GLU A . n A 1 202 ASP 202 184 184 ASP ASP A . n A 1 203 LEU 203 185 185 LEU LEU A . n A 1 204 ILE 204 186 186 ILE ILE A . n A 1 205 GLN 205 187 187 GLN GLN A . n A 1 206 GLU 206 188 188 GLU GLU A . n A 1 207 LEU 207 189 189 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 1102 1102 MG MG A . C 3 ADP 1 1101 1101 ADP ADP A . D 4 UNX 1 1103 1 UNX UNX A . E 4 UNX 1 1104 2 UNX UNX A . F 4 UNX 1 1105 3 UNX UNX A . G 4 UNX 1 1106 4 UNX UNX A . H 4 UNX 1 1107 5 UNX UNX A . I 5 HOH 1 1108 1 HOH HOH A . I 5 HOH 2 1109 2 HOH HOH A . I 5 HOH 3 1110 3 HOH HOH A . I 5 HOH 4 1111 4 HOH HOH A . I 5 HOH 5 1112 5 HOH HOH A . I 5 HOH 6 1113 6 HOH HOH A . I 5 HOH 7 1114 7 HOH HOH A . I 5 HOH 8 1115 8 HOH HOH A . I 5 HOH 9 1116 9 HOH HOH A . I 5 HOH 10 1117 10 HOH HOH A . I 5 HOH 11 1118 11 HOH HOH A . I 5 HOH 12 1119 12 HOH HOH A . I 5 HOH 13 1120 13 HOH HOH A . I 5 HOH 14 1121 14 HOH HOH A . I 5 HOH 15 1122 15 HOH HOH A . I 5 HOH 16 1123 16 HOH HOH A . I 5 HOH 17 1124 17 HOH HOH A . I 5 HOH 18 1125 18 HOH HOH A . I 5 HOH 19 1126 19 HOH HOH A . I 5 HOH 20 1127 20 HOH HOH A . I 5 HOH 21 1128 21 HOH HOH A . I 5 HOH 22 1129 22 HOH HOH A . I 5 HOH 23 1130 23 HOH HOH A . I 5 HOH 24 1131 24 HOH HOH A . I 5 HOH 25 1132 25 HOH HOH A . I 5 HOH 26 1133 26 HOH HOH A . I 5 HOH 27 1134 30 HOH HOH A . I 5 HOH 28 1135 31 HOH HOH A . I 5 HOH 29 1136 32 HOH HOH A . I 5 HOH 30 1137 33 HOH HOH A . I 5 HOH 31 1138 34 HOH HOH A . I 5 HOH 32 1139 35 HOH HOH A . I 5 HOH 33 1140 37 HOH HOH A . I 5 HOH 34 1141 38 HOH HOH A . I 5 HOH 35 1142 39 HOH HOH A . I 5 HOH 36 1143 41 HOH HOH A . I 5 HOH 37 1144 42 HOH HOH A . I 5 HOH 38 1145 43 HOH HOH A . I 5 HOH 39 1146 44 HOH HOH A . I 5 HOH 40 1147 45 HOH HOH A . I 5 HOH 41 1148 46 HOH HOH A . I 5 HOH 42 1149 47 HOH HOH A . I 5 HOH 43 1150 48 HOH HOH A . I 5 HOH 44 1151 49 HOH HOH A . I 5 HOH 45 1152 50 HOH HOH A . I 5 HOH 46 1153 51 HOH HOH A . I 5 HOH 47 1154 52 HOH HOH A . I 5 HOH 48 1155 53 HOH HOH A . I 5 HOH 49 1156 54 HOH HOH A . I 5 HOH 50 1157 55 HOH HOH A . I 5 HOH 51 1158 56 HOH HOH A . I 5 HOH 52 1159 57 HOH HOH A . I 5 HOH 53 1160 58 HOH HOH A . I 5 HOH 54 1161 59 HOH HOH A . I 5 HOH 55 1162 61 HOH HOH A . I 5 HOH 56 1163 62 HOH HOH A . I 5 HOH 57 1164 63 HOH HOH A . I 5 HOH 58 1165 64 HOH HOH A . I 5 HOH 59 1166 65 HOH HOH A . I 5 HOH 60 1167 66 HOH HOH A . I 5 HOH 61 1168 67 HOH HOH A . I 5 HOH 62 1169 68 HOH HOH A . I 5 HOH 63 1170 70 HOH HOH A . I 5 HOH 64 1171 71 HOH HOH A . I 5 HOH 65 1172 72 HOH HOH A . I 5 HOH 66 1173 73 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 81 A MSE 63 ? MET SELENOMETHIONINE 2 A MSE 84 A MSE 66 ? MET SELENOMETHIONINE 3 A MSE 85 A MSE 67 ? MET SELENOMETHIONINE 4 A MSE 92 A MSE 74 ? MET SELENOMETHIONINE 5 A MSE 168 A MSE 150 ? MET SELENOMETHIONINE 6 A MSE 176 A MSE 158 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1110 ? 1_555 82.8 ? 2 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1173 ? 1_555 84.4 ? 3 O ? I HOH . ? A HOH 1110 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1173 ? 1_555 88.5 ? 4 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O2B ? C ADP . ? A ADP 1101 ? 1_555 82.2 ? 5 O ? I HOH . ? A HOH 1110 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O2B ? C ADP . ? A ADP 1101 ? 1_555 91.8 ? 6 O ? I HOH . ? A HOH 1173 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O2B ? C ADP . ? A ADP 1101 ? 1_555 166.4 ? 7 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1108 ? 1_555 178.1 ? 8 O ? I HOH . ? A HOH 1110 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1108 ? 1_555 98.4 ? 9 O ? I HOH . ? A HOH 1173 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1108 ? 1_555 97.0 ? 10 O2B ? C ADP . ? A ADP 1101 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1108 ? 1_555 96.4 ? 11 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1109 ? 1_555 91.0 ? 12 O ? I HOH . ? A HOH 1110 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1109 ? 1_555 173.5 ? 13 O ? I HOH . ? A HOH 1173 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1109 ? 1_555 93.0 ? 14 O2B ? C ADP . ? A ADP 1101 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1109 ? 1_555 85.2 ? 15 O ? I HOH . ? A HOH 1108 ? 1_555 MG ? B MG . ? A MG 1102 ? 1_555 O ? I HOH . ? A HOH 1109 ? 1_555 87.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-08-14 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 REFMAC refmac_5.2.0019 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ; BIOMOLECULE: 1 SEE REMARK 350 FOR THE PROGRAM GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN THIS ENTRY. AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS POLYPEPTIDE IS UNKNOWN. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 56 ? ? -99.92 47.48 2 1 HIS A 146 ? ? -139.31 -60.31 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 2 ? CG ? A LYS 20 CG 2 1 Y 1 A LYS 2 ? CD ? A LYS 20 CD 3 1 Y 1 A LYS 2 ? CE ? A LYS 20 CE 4 1 Y 1 A LYS 2 ? NZ ? A LYS 20 NZ 5 1 Y 1 A LYS 21 ? CE ? A LYS 39 CE 6 1 Y 1 A LYS 21 ? NZ ? A LYS 39 NZ 7 1 Y 1 A GLU 42 ? CG ? A GLU 60 CG 8 1 Y 1 A GLU 42 ? CD ? A GLU 60 CD 9 1 Y 1 A GLU 42 ? OE1 ? A GLU 60 OE1 10 1 Y 1 A GLU 42 ? OE2 ? A GLU 60 OE2 11 1 Y 1 A GLU 64 ? CD ? A GLU 82 CD 12 1 Y 1 A GLU 64 ? OE1 ? A GLU 82 OE1 13 1 Y 1 A GLU 64 ? OE2 ? A GLU 82 OE2 14 1 Y 1 A LYS 106 ? CD ? A LYS 124 CD 15 1 Y 1 A LYS 106 ? CE ? A LYS 124 CE 16 1 Y 1 A LYS 106 ? NZ ? A LYS 124 NZ 17 1 Y 1 A GLU 123 ? CD ? A GLU 141 CD 18 1 Y 1 A GLU 123 ? OE1 ? A GLU 141 OE1 19 1 Y 1 A GLU 123 ? OE2 ? A GLU 141 OE2 20 1 Y 1 A LYS 153 ? CE ? A LYS 171 CE 21 1 Y 1 A LYS 153 ? NZ ? A LYS 171 NZ 22 1 Y 1 A GLN 156 ? CG ? A GLN 174 CG 23 1 Y 1 A GLN 156 ? CD ? A GLN 174 CD 24 1 Y 1 A GLN 156 ? OE1 ? A GLN 174 OE1 25 1 Y 1 A GLN 156 ? NE2 ? A GLN 174 NE2 26 1 Y 1 A GLN 159 ? CG ? A GLN 177 CG 27 1 Y 1 A GLN 159 ? CD ? A GLN 177 CD 28 1 Y 1 A GLN 159 ? OE1 ? A GLN 177 OE1 29 1 Y 1 A GLN 159 ? NE2 ? A GLN 177 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -17 ? A MSE 1 2 1 Y 1 A GLY -16 ? A GLY 2 3 1 Y 1 A SER -15 ? A SER 3 4 1 Y 1 A SER -14 ? A SER 4 5 1 Y 1 A HIS -13 ? A HIS 5 6 1 Y 1 A HIS -12 ? A HIS 6 7 1 Y 1 A HIS -11 ? A HIS 7 8 1 Y 1 A HIS -10 ? A HIS 8 9 1 Y 1 A HIS -9 ? A HIS 9 10 1 Y 1 A HIS -8 ? A HIS 10 11 1 Y 1 A SER -7 ? A SER 11 12 1 Y 1 A SER -6 ? A SER 12 13 1 Y 1 A GLY -5 ? A GLY 13 14 1 Y 1 A LEU -4 ? A LEU 14 15 1 Y 1 A VAL -3 ? A VAL 15 16 1 Y 1 A PRO -2 ? A PRO 16 17 1 Y 1 A ARG -1 ? A ARG 17 18 1 Y 1 A GLY 0 ? A GLY 18 19 1 Y 1 A SER 83 ? A SER 101 20 1 Y 1 A THR 84 ? A THR 102 21 1 Y 1 A ASP 85 ? A ASP 103 22 1 Y 1 A GLN 86 ? A GLN 104 23 1 Y 1 A GLU 87 ? A GLU 105 24 1 Y 1 A SER 88 ? A SER 106 25 1 Y 1 A ALA 89 ? A ALA 107 26 1 Y 1 A GLU 90 ? A GLU 108 27 1 Y 1 A GLU 91 ? A GLU 109 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "ADENOSINE-5'-DIPHOSPHATE" ADP 4 'UNKNOWN ATOM OR ION' UNX 5 water HOH #