data_2QT0 # _entry.id 2QT0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2QT0 pdb_00002qt0 10.2210/pdb2qt0/pdb RCSB RCSB044017 ? ? WWPDB D_1000044017 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2QSY 'Human nicotinamide riboside kinase 1 in complex with ADP' unspecified PDB 2QSZ 'Human nicotinamide riboside kinase 1 in complex with nicotinamide mononucleotide' unspecified PDB 2QT1 'Human nicotinamide riboside kinase 1 in complex with nicotinamide riboside' unspecified # _pdbx_database_status.entry_id 2QT0 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-07-31 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rabeh, W.M.' 1 'Tempel, W.' 2 'Nedyalkova, L.' 3 'Landry, R.' 4 'Arrowsmith, C.H.' 5 'Edwards, A.M.' 6 'Sundstrom, M.' 7 'Weigelt, J.' 8 'Bochkarev, A.' 9 'Brenner, C.' 10 'Park, H.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'Nicotinamide Riboside Kinase Structures Reveal New Pathways to NAD(+).' _citation.journal_abbrev 'Plos Biol.' _citation.journal_volume 5 _citation.page_first e263 _citation.page_last e263 _citation.year 2007 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1544-9173 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17914902 _citation.pdbx_database_id_DOI 10.1371/journal.pbio.0050263 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tempel, W.' 1 ? primary 'Rabeh, W.M.' 2 ? primary 'Bogan, K.L.' 3 ? primary 'Belenky, P.' 4 ? primary 'Wojcik, M.' 5 ? primary 'Seidle, H.F.' 6 ? primary 'Nedyalkova, L.' 7 ? primary 'Yang, T.' 8 ? primary 'Sauve, A.A.' 9 ? primary 'Park, H.W.' 10 ? primary 'Brenner, C.' 11 ? # _cell.entry_id 2QT0 _cell.length_a 97.025 _cell.length_b 97.025 _cell.length_c 44.801 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2QT0 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.Int_Tables_number 92 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nicotinamide riboside kinase 1' 24373.371 1 2.7.1.- ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 506.196 1 ? ? ? ? 4 non-polymer syn 'Nicotinamide riboside' 255.247 1 ? ? ? ? 5 water nat water 18.015 35 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGLVPRGSKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVL EALN(MSE)EK(MSE)(MSE)SAISCW(MSE)ESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTIPY EECKRRRSTRVYQPPDSPGYFDGHVWP(MSE)YLKYRQE(MSE)QDITWEVVYLDGTKSEEDLFLQVYEDLIQEL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALN MEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTIPYEECKRRRSTRVYQPPDSPGY FDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQVYEDLIQEL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 LYS n 1 21 THR n 1 22 PHE n 1 23 ILE n 1 24 ILE n 1 25 GLY n 1 26 ILE n 1 27 SER n 1 28 GLY n 1 29 VAL n 1 30 THR n 1 31 ASN n 1 32 SER n 1 33 GLY n 1 34 LYS n 1 35 THR n 1 36 THR n 1 37 LEU n 1 38 ALA n 1 39 LYS n 1 40 ASN n 1 41 LEU n 1 42 GLN n 1 43 LYS n 1 44 HIS n 1 45 LEU n 1 46 PRO n 1 47 ASN n 1 48 CYS n 1 49 SER n 1 50 VAL n 1 51 ILE n 1 52 SER n 1 53 GLN n 1 54 ASP n 1 55 ASP n 1 56 PHE n 1 57 PHE n 1 58 LYS n 1 59 PRO n 1 60 GLU n 1 61 SER n 1 62 GLU n 1 63 ILE n 1 64 GLU n 1 65 THR n 1 66 ASP n 1 67 LYS n 1 68 ASN n 1 69 GLY n 1 70 PHE n 1 71 LEU n 1 72 GLN n 1 73 TYR n 1 74 ASP n 1 75 VAL n 1 76 LEU n 1 77 GLU n 1 78 ALA n 1 79 LEU n 1 80 ASN n 1 81 MSE n 1 82 GLU n 1 83 LYS n 1 84 MSE n 1 85 MSE n 1 86 SER n 1 87 ALA n 1 88 ILE n 1 89 SER n 1 90 CYS n 1 91 TRP n 1 92 MSE n 1 93 GLU n 1 94 SER n 1 95 ALA n 1 96 ARG n 1 97 HIS n 1 98 SER n 1 99 VAL n 1 100 VAL n 1 101 SER n 1 102 THR n 1 103 ASP n 1 104 GLN n 1 105 GLU n 1 106 SER n 1 107 ALA n 1 108 GLU n 1 109 GLU n 1 110 ILE n 1 111 PRO n 1 112 ILE n 1 113 LEU n 1 114 ILE n 1 115 ILE n 1 116 GLU n 1 117 GLY n 1 118 PHE n 1 119 LEU n 1 120 LEU n 1 121 PHE n 1 122 ASN n 1 123 TYR n 1 124 LYS n 1 125 PRO n 1 126 LEU n 1 127 ASP n 1 128 THR n 1 129 ILE n 1 130 TRP n 1 131 ASN n 1 132 ARG n 1 133 SER n 1 134 TYR n 1 135 PHE n 1 136 LEU n 1 137 THR n 1 138 ILE n 1 139 PRO n 1 140 TYR n 1 141 GLU n 1 142 GLU n 1 143 CYS n 1 144 LYS n 1 145 ARG n 1 146 ARG n 1 147 ARG n 1 148 SER n 1 149 THR n 1 150 ARG n 1 151 VAL n 1 152 TYR n 1 153 GLN n 1 154 PRO n 1 155 PRO n 1 156 ASP n 1 157 SER n 1 158 PRO n 1 159 GLY n 1 160 TYR n 1 161 PHE n 1 162 ASP n 1 163 GLY n 1 164 HIS n 1 165 VAL n 1 166 TRP n 1 167 PRO n 1 168 MSE n 1 169 TYR n 1 170 LEU n 1 171 LYS n 1 172 TYR n 1 173 ARG n 1 174 GLN n 1 175 GLU n 1 176 MSE n 1 177 GLN n 1 178 ASP n 1 179 ILE n 1 180 THR n 1 181 TRP n 1 182 GLU n 1 183 VAL n 1 184 VAL n 1 185 TYR n 1 186 LEU n 1 187 ASP n 1 188 GLY n 1 189 THR n 1 190 LYS n 1 191 SER n 1 192 GLU n 1 193 GLU n 1 194 ASP n 1 195 LEU n 1 196 PHE n 1 197 LEU n 1 198 GLN n 1 199 VAL n 1 200 TYR n 1 201 GLU n 1 202 ASP n 1 203 LEU n 1 204 ILE n 1 205 GLN n 1 206 GLU n 1 207 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'NRK1, C9orf95' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) codon plus RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p28a-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NRK1_HUMAN _struct_ref.pdbx_db_accession Q9NWW6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALNMEKMMSAISCWMESARHSV VSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDI TWEVVYLDGTKSEEDLFLQVYEDLIQEL ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2QT0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 207 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NWW6 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 189 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 189 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2QT0 MSE A 1 ? UNP Q9NWW6 ? ? 'expression tag' -17 1 1 2QT0 GLY A 2 ? UNP Q9NWW6 ? ? 'expression tag' -16 2 1 2QT0 SER A 3 ? UNP Q9NWW6 ? ? 'expression tag' -15 3 1 2QT0 SER A 4 ? UNP Q9NWW6 ? ? 'expression tag' -14 4 1 2QT0 HIS A 5 ? UNP Q9NWW6 ? ? 'expression tag' -13 5 1 2QT0 HIS A 6 ? UNP Q9NWW6 ? ? 'expression tag' -12 6 1 2QT0 HIS A 7 ? UNP Q9NWW6 ? ? 'expression tag' -11 7 1 2QT0 HIS A 8 ? UNP Q9NWW6 ? ? 'expression tag' -10 8 1 2QT0 HIS A 9 ? UNP Q9NWW6 ? ? 'expression tag' -9 9 1 2QT0 HIS A 10 ? UNP Q9NWW6 ? ? 'expression tag' -8 10 1 2QT0 SER A 11 ? UNP Q9NWW6 ? ? 'expression tag' -7 11 1 2QT0 SER A 12 ? UNP Q9NWW6 ? ? 'expression tag' -6 12 1 2QT0 GLY A 13 ? UNP Q9NWW6 ? ? 'expression tag' -5 13 1 2QT0 LEU A 14 ? UNP Q9NWW6 ? ? 'expression tag' -4 14 1 2QT0 VAL A 15 ? UNP Q9NWW6 ? ? 'expression tag' -3 15 1 2QT0 PRO A 16 ? UNP Q9NWW6 ? ? 'expression tag' -2 16 1 2QT0 ARG A 17 ? UNP Q9NWW6 ? ? 'expression tag' -1 17 1 2QT0 GLY A 18 ? UNP Q9NWW6 ? ? 'expression tag' 0 18 1 2QT0 SER A 19 ? UNP Q9NWW6 ? ? 'expression tag' 1 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ANP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ? 'C10 H17 N6 O12 P3' 506.196 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NNR non-polymer . 'Nicotinamide riboside' '3-(aminocarbonyl)-1-beta-D-ribofuranosylpyridinium' 'C11 H15 N2 O5 1' 255.247 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2QT0 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 43.13 _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details ;35% PEG 2000 MME, 0.1M Tris-HCl. The protein solution (40mg/mL) contained 0.01M Nicotinamide riboside, 0.01M AMPPNP and 0.02M Magnesium chloride, pH 8.0, VAPOR DIFFUSION, temperature 291K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS' _diffrn_detector.pdbx_collection_date 2007-03-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2QT0 _reflns.d_resolution_high 1.920 _reflns.d_resolution_low 30.000 _reflns.number_obs 31229 _reflns.pdbx_Rmerge_I_obs 0.086 _reflns.pdbx_netI_over_sigmaI 10.700 _reflns.pdbx_chi_squared 1.911 _reflns.pdbx_redundancy 6.500 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.92 1.99 ? ? ? 0.999 ? ? 1.733 6.20 ? 3112 100.00 ? 1 1.99 2.07 ? ? ? 0.777 ? ? 1.754 6.30 ? 3141 100.00 ? 2 2.07 2.16 ? ? ? 0.538 ? ? 1.826 6.30 ? 3114 100.00 ? 3 2.16 2.28 ? ? ? 0.436 ? ? 1.918 6.40 ? 3122 100.00 ? 4 2.28 2.42 ? ? ? 0.295 ? ? 1.879 6.50 ? 3097 100.00 ? 5 2.42 2.61 ? ? ? 0.223 ? ? 1.915 6.50 ? 3140 100.00 ? 6 2.61 2.87 ? ? ? 0.147 ? ? 2.048 6.60 ? 3129 100.00 ? 7 2.87 3.28 ? ? ? 0.080 ? ? 2.052 6.60 ? 3103 100.00 ? 8 3.28 4.13 ? ? ? 0.047 ? ? 2.201 6.70 ? 3132 100.00 ? 9 4.13 30.00 ? ? ? 0.033 ? ? 1.758 6.80 ? 3139 100.00 ? 10 # _refine.entry_id 2QT0 _refine.ls_d_res_high 1.920 _refine.ls_d_res_low 30.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.910 _refine.ls_number_reflns_obs 16835 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. The Bijvoet differences were used for phasing. 2. Arp/warp, coot, prodrg, molprobity programs have also been used in refinement. 3. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ; _refine.ls_R_factor_all 0.211 _refine.ls_R_factor_R_work 0.209 _refine.ls_wR_factor_R_work 0.191 _refine.ls_R_factor_R_free 0.241 _refine.ls_wR_factor_R_free 0.226 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 851 _refine.B_iso_mean 27.811 _refine.aniso_B[1][1] 0.300 _refine.aniso_B[2][2] 0.300 _refine.aniso_B[3][3] -0.610 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.pdbx_overall_ESU_R 0.162 _refine.pdbx_overall_ESU_R_Free 0.147 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB entry 2P0E' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1457 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 35 _refine_hist.number_atoms_total 1542 _refine_hist.d_res_high 1.920 _refine_hist.d_res_low 30.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1548 0.017 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1031 0.000 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2112 1.416 1.998 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2486 4.146 3.004 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 181 5.811 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 71 28.841 24.366 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 254 13.375 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7 10.315 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 229 0.083 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1673 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 311 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 284 0.207 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 918 0.235 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 750 0.184 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 681 0.123 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 49 0.161 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 12 0.409 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 27 0.323 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 2 0.099 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 899 2.349 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 359 0.000 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1464 3.348 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 649 2.408 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 646 3.150 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id 20 1.971 1.920 1228 99.756 1165 0.245 60 0.312 . . . . . 'X-RAY DIFFRACTION' 20 2.025 1.971 1186 99.831 1114 0.249 70 0.349 . . . . . 'X-RAY DIFFRACTION' 20 2.083 2.025 1126 99.911 1068 0.231 57 0.278 . . . . . 'X-RAY DIFFRACTION' 20 2.147 2.083 1146 100.000 1082 0.219 64 0.251 . . . . . 'X-RAY DIFFRACTION' 20 2.217 2.147 1092 99.908 1045 0.228 46 0.290 . . . . . 'X-RAY DIFFRACTION' 20 2.294 2.217 1035 100.000 990 0.240 45 0.237 . . . . . 'X-RAY DIFFRACTION' 20 2.380 2.294 1027 99.805 971 0.210 54 0.237 . . . . . 'X-RAY DIFFRACTION' 20 2.477 2.380 992 100.000 939 0.223 53 0.264 . . . . . 'X-RAY DIFFRACTION' 20 2.586 2.477 935 100.000 872 0.221 63 0.287 . . . . . 'X-RAY DIFFRACTION' 20 2.711 2.586 906 100.000 862 0.240 44 0.295 . . . . . 'X-RAY DIFFRACTION' 20 2.857 2.711 877 100.000 832 0.248 45 0.259 . . . . . 'X-RAY DIFFRACTION' 20 3.028 2.857 821 99.878 785 0.230 35 0.270 . . . . . 'X-RAY DIFFRACTION' 20 3.235 3.028 788 99.873 756 0.229 31 0.274 . . . . . 'X-RAY DIFFRACTION' 20 3.491 3.235 724 99.724 684 0.209 38 0.294 . . . . . 'X-RAY DIFFRACTION' 20 3.819 3.491 678 100.000 644 0.186 34 0.195 . . . . . 'X-RAY DIFFRACTION' 20 4.261 3.819 620 99.839 587 0.174 32 0.212 . . . . . 'X-RAY DIFFRACTION' 20 4.904 4.261 551 99.819 526 0.156 24 0.138 . . . . . 'X-RAY DIFFRACTION' 20 5.966 4.904 479 100.000 455 0.178 24 0.178 . . . . . 'X-RAY DIFFRACTION' 20 8.276 5.966 386 100.000 369 0.229 17 0.260 . . . . . 'X-RAY DIFFRACTION' 20 30.000 8.276 253 100.000 238 0.203 15 0.221 . . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 2QT0 _struct.title 'Human nicotinamide riboside kinase 1 in complex with nicotinamide riboside and an ATP analogue' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2QT0 _struct_keywords.text ;non-protein kinase, NAD+, nicotinamide riboside, nrk1, nicotinamide riboside kinase activity, nicotinic acid riboside kinase activity, NAD biosynthesis, pyridine nucleotide biosynthesis, ATP analogue, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, Alternative splicing, ATP-binding, Nucleotide-binding, Transferase ; _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details 'not known' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 33 ? LEU A 45 ? GLY A 15 LEU A 27 1 ? 13 HELX_P HELX_P2 2 ASP A 54 ? PHE A 57 ? ASP A 36 PHE A 39 5 ? 4 HELX_P HELX_P3 3 PRO A 59 ? ILE A 63 ? PRO A 41 ILE A 45 5 ? 5 HELX_P HELX_P4 4 VAL A 75 ? LEU A 79 ? VAL A 57 LEU A 61 5 ? 5 HELX_P HELX_P5 5 ASN A 80 ? ALA A 95 ? ASN A 62 ALA A 77 1 ? 16 HELX_P HELX_P6 6 ARG A 96 ? VAL A 99 ? ARG A 78 VAL A 81 5 ? 4 HELX_P HELX_P7 7 TYR A 123 ? ASP A 127 ? TYR A 105 ASP A 109 5 ? 5 HELX_P HELX_P8 8 PRO A 139 ? ARG A 150 ? PRO A 121 ARG A 132 1 ? 12 HELX_P HELX_P9 9 GLY A 159 ? HIS A 164 ? GLY A 141 HIS A 146 1 ? 6 HELX_P HELX_P10 10 HIS A 164 ? MSE A 176 ? HIS A 146 MSE A 158 1 ? 13 HELX_P HELX_P11 11 GLN A 177 ? ILE A 179 ? GLN A 159 ILE A 161 5 ? 3 HELX_P HELX_P12 12 SER A 191 ? GLN A 205 ? SER A 173 GLN A 187 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 80 C ? ? ? 1_555 A MSE 81 N ? ? A ASN 62 A MSE 63 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 81 C ? ? ? 1_555 A GLU 82 N ? ? A MSE 63 A GLU 64 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale3 covale both ? A LYS 83 C ? ? ? 1_555 A MSE 84 N ? ? A LYS 65 A MSE 66 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A MSE 84 C ? ? ? 1_555 A MSE 85 N ? ? A MSE 66 A MSE 67 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? A MSE 85 C ? ? ? 1_555 A SER 86 N ? ? A MSE 67 A SER 68 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? A TRP 91 C ? ? ? 1_555 A MSE 92 N ? ? A TRP 73 A MSE 74 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A MSE 92 C ? ? ? 1_555 A GLU 93 N ? ? A MSE 74 A GLU 75 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale8 covale both ? A PRO 167 C ? ? ? 1_555 A MSE 168 N ? ? A PRO 149 A MSE 150 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale9 covale both ? A MSE 168 C ? ? ? 1_555 A TYR 169 N ? ? A MSE 150 A TYR 151 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale10 covale both ? A GLU 175 C ? ? ? 1_555 A MSE 176 N ? ? A GLU 157 A MSE 158 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale11 covale both ? A MSE 176 C ? ? ? 1_555 A GLN 177 N ? ? A MSE 158 A GLN 159 1_555 ? ? ? ? ? ? ? 1.336 ? ? metalc1 metalc ? ? A THR 35 OG1 ? ? ? 1_555 B MG . MG ? ? A THR 17 A MG 1001 1_555 ? ? ? ? ? ? ? 2.139 ? ? metalc2 metalc ? ? A ASP 54 OD2 ? ? ? 1_555 B MG . MG ? ? A ASP 36 A MG 1001 1_555 ? ? ? ? ? ? ? 2.104 ? ? metalc3 metalc ? ? E HOH . O ? ? ? 1_555 B MG . MG ? ? A HOH 231 A MG 1001 1_555 ? ? ? ? ? ? ? 2.158 ? ? metalc4 metalc ? ? E HOH . O ? ? ? 1_555 B MG . MG ? ? A HOH 232 A MG 1001 1_555 ? ? ? ? ? ? ? 2.133 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 C ANP . O1G ? ? A MG 1001 A ANP 1102 1_555 ? ? ? ? ? ? ? 2.077 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 C ANP . O2B ? ? A MG 1001 A ANP 1102 1_555 ? ? ? ? ? ? ? 2.004 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 153 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 135 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 154 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 136 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.31 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 48 ? SER A 52 ? CYS A 30 SER A 34 A 2 ILE A 112 ? GLU A 116 ? ILE A 94 GLU A 98 A 3 PHE A 22 ? GLY A 28 ? PHE A 4 GLY A 10 A 4 ARG A 132 ? THR A 137 ? ARG A 114 THR A 119 A 5 VAL A 184 ? ASP A 187 ? VAL A 166 ASP A 169 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 49 ? N SER A 31 O ILE A 114 ? O ILE A 96 A 2 3 O LEU A 113 ? O LEU A 95 N ILE A 24 ? N ILE A 6 A 3 4 N GLY A 25 ? N GLY A 7 O ARG A 132 ? O ARG A 114 A 4 5 N PHE A 135 ? N PHE A 117 O LEU A 186 ? O LEU A 168 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1001 ? 5 'BINDING SITE FOR RESIDUE MG A 1001' AC2 Software A ANP 1102 ? 19 'BINDING SITE FOR RESIDUE ANP A 1102' AC3 Software A NNR 1103 ? 10 'BINDING SITE FOR RESIDUE NNR A 1103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 THR A 35 ? THR A 17 . ? 1_555 ? 2 AC1 5 ASP A 54 ? ASP A 36 . ? 1_555 ? 3 AC1 5 HOH E . ? HOH A 231 . ? 1_555 ? 4 AC1 5 HOH E . ? HOH A 232 . ? 1_555 ? 5 AC1 5 ANP C . ? ANP A 1102 . ? 1_555 ? 6 AC2 19 THR A 30 ? THR A 12 . ? 1_555 ? 7 AC2 19 ASN A 31 ? ASN A 13 . ? 1_555 ? 8 AC2 19 SER A 32 ? SER A 14 . ? 1_555 ? 9 AC2 19 GLY A 33 ? GLY A 15 . ? 1_555 ? 10 AC2 19 LYS A 34 ? LYS A 16 . ? 1_555 ? 11 AC2 19 THR A 35 ? THR A 17 . ? 1_555 ? 12 AC2 19 THR A 36 ? THR A 18 . ? 1_555 ? 13 AC2 19 ASP A 54 ? ASP A 36 . ? 1_555 ? 14 AC2 19 ARG A 146 ? ARG A 128 . ? 1_555 ? 15 AC2 19 ARG A 150 ? ARG A 132 . ? 1_555 ? 16 AC2 19 TYR A 152 ? TYR A 134 . ? 1_555 ? 17 AC2 19 LYS A 190 ? LYS A 172 . ? 1_555 ? 18 AC2 19 SER A 191 ? SER A 173 . ? 1_555 ? 19 AC2 19 GLU A 192 ? GLU A 174 . ? 1_555 ? 20 AC2 19 LEU A 195 ? LEU A 177 . ? 1_555 ? 21 AC2 19 HOH E . ? HOH A 231 . ? 1_555 ? 22 AC2 19 HOH E . ? HOH A 232 . ? 1_555 ? 23 AC2 19 MG B . ? MG A 1001 . ? 1_555 ? 24 AC2 19 NNR D . ? NNR A 1103 . ? 1_555 ? 25 AC3 10 THR A 30 ? THR A 12 . ? 1_555 ? 26 AC3 10 ASP A 54 ? ASP A 36 . ? 1_555 ? 27 AC3 10 PHE A 57 ? PHE A 39 . ? 1_555 ? 28 AC3 10 TYR A 73 ? TYR A 55 . ? 1_555 ? 29 AC3 10 ASP A 74 ? ASP A 56 . ? 1_555 ? 30 AC3 10 ARG A 147 ? ARG A 129 . ? 1_555 ? 31 AC3 10 TYR A 152 ? TYR A 134 . ? 1_555 ? 32 AC3 10 GLN A 153 ? GLN A 135 . ? 1_555 ? 33 AC3 10 HOH E . ? HOH A 208 . ? 1_555 ? 34 AC3 10 ANP C . ? ANP A 1102 . ? 1_555 ? # _atom_sites.entry_id 2QT0 _atom_sites.fract_transf_matrix[1][1] 0.01031 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01031 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02232 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -17 ? ? ? A . n A 1 2 GLY 2 -16 ? ? ? A . n A 1 3 SER 3 -15 ? ? ? A . n A 1 4 SER 4 -14 ? ? ? A . n A 1 5 HIS 5 -13 ? ? ? A . n A 1 6 HIS 6 -12 ? ? ? A . n A 1 7 HIS 7 -11 ? ? ? A . n A 1 8 HIS 8 -10 ? ? ? A . n A 1 9 HIS 9 -9 ? ? ? A . n A 1 10 HIS 10 -8 ? ? ? A . n A 1 11 SER 11 -7 ? ? ? A . n A 1 12 SER 12 -6 ? ? ? A . n A 1 13 GLY 13 -5 ? ? ? A . n A 1 14 LEU 14 -4 ? ? ? A . n A 1 15 VAL 15 -3 ? ? ? A . n A 1 16 PRO 16 -2 ? ? ? A . n A 1 17 ARG 17 -1 -1 ARG ARG A . n A 1 18 GLY 18 0 0 GLY GLY A . n A 1 19 SER 19 1 1 SER SER A . n A 1 20 LYS 20 2 2 LYS LYS A . n A 1 21 THR 21 3 3 THR THR A . n A 1 22 PHE 22 4 4 PHE PHE A . n A 1 23 ILE 23 5 5 ILE ILE A . n A 1 24 ILE 24 6 6 ILE ILE A . n A 1 25 GLY 25 7 7 GLY GLY A . n A 1 26 ILE 26 8 8 ILE ILE A . n A 1 27 SER 27 9 9 SER SER A . n A 1 28 GLY 28 10 10 GLY GLY A . n A 1 29 VAL 29 11 11 VAL VAL A . n A 1 30 THR 30 12 12 THR THR A . n A 1 31 ASN 31 13 13 ASN ASN A . n A 1 32 SER 32 14 14 SER SER A . n A 1 33 GLY 33 15 15 GLY GLY A . n A 1 34 LYS 34 16 16 LYS LYS A . n A 1 35 THR 35 17 17 THR THR A . n A 1 36 THR 36 18 18 THR THR A . n A 1 37 LEU 37 19 19 LEU LEU A . n A 1 38 ALA 38 20 20 ALA ALA A . n A 1 39 LYS 39 21 21 LYS LYS A . n A 1 40 ASN 40 22 22 ASN ASN A . n A 1 41 LEU 41 23 23 LEU LEU A . n A 1 42 GLN 42 24 24 GLN GLN A . n A 1 43 LYS 43 25 25 LYS LYS A . n A 1 44 HIS 44 26 26 HIS HIS A . n A 1 45 LEU 45 27 27 LEU LEU A . n A 1 46 PRO 46 28 28 PRO PRO A . n A 1 47 ASN 47 29 29 ASN ASN A . n A 1 48 CYS 48 30 30 CYS CYS A . n A 1 49 SER 49 31 31 SER SER A . n A 1 50 VAL 50 32 32 VAL VAL A . n A 1 51 ILE 51 33 33 ILE ILE A . n A 1 52 SER 52 34 34 SER SER A . n A 1 53 GLN 53 35 35 GLN GLN A . n A 1 54 ASP 54 36 36 ASP ASP A . n A 1 55 ASP 55 37 37 ASP ASP A . n A 1 56 PHE 56 38 38 PHE PHE A . n A 1 57 PHE 57 39 39 PHE PHE A . n A 1 58 LYS 58 40 40 LYS LYS A . n A 1 59 PRO 59 41 41 PRO PRO A . n A 1 60 GLU 60 42 42 GLU GLU A . n A 1 61 SER 61 43 43 SER SER A . n A 1 62 GLU 62 44 44 GLU GLU A . n A 1 63 ILE 63 45 45 ILE ILE A . n A 1 64 GLU 64 46 46 GLU GLU A . n A 1 65 THR 65 47 47 THR THR A . n A 1 66 ASP 66 48 48 ASP ASP A . n A 1 67 LYS 67 49 49 LYS LYS A . n A 1 68 ASN 68 50 50 ASN ASN A . n A 1 69 GLY 69 51 51 GLY GLY A . n A 1 70 PHE 70 52 52 PHE PHE A . n A 1 71 LEU 71 53 53 LEU LEU A . n A 1 72 GLN 72 54 54 GLN GLN A . n A 1 73 TYR 73 55 55 TYR TYR A . n A 1 74 ASP 74 56 56 ASP ASP A . n A 1 75 VAL 75 57 57 VAL VAL A . n A 1 76 LEU 76 58 58 LEU LEU A . n A 1 77 GLU 77 59 59 GLU GLU A . n A 1 78 ALA 78 60 60 ALA ALA A . n A 1 79 LEU 79 61 61 LEU LEU A . n A 1 80 ASN 80 62 62 ASN ASN A . n A 1 81 MSE 81 63 63 MSE MSE A . n A 1 82 GLU 82 64 64 GLU GLU A . n A 1 83 LYS 83 65 65 LYS LYS A . n A 1 84 MSE 84 66 66 MSE MSE A . n A 1 85 MSE 85 67 67 MSE MSE A . n A 1 86 SER 86 68 68 SER SER A . n A 1 87 ALA 87 69 69 ALA ALA A . n A 1 88 ILE 88 70 70 ILE ILE A . n A 1 89 SER 89 71 71 SER SER A . n A 1 90 CYS 90 72 72 CYS CYS A . n A 1 91 TRP 91 73 73 TRP TRP A . n A 1 92 MSE 92 74 74 MSE MSE A . n A 1 93 GLU 93 75 75 GLU GLU A . n A 1 94 SER 94 76 76 SER SER A . n A 1 95 ALA 95 77 77 ALA ALA A . n A 1 96 ARG 96 78 78 ARG ARG A . n A 1 97 HIS 97 79 79 HIS HIS A . n A 1 98 SER 98 80 80 SER SER A . n A 1 99 VAL 99 81 81 VAL VAL A . n A 1 100 VAL 100 82 ? ? ? A . n A 1 101 SER 101 83 ? ? ? A . n A 1 102 THR 102 84 ? ? ? A . n A 1 103 ASP 103 85 ? ? ? A . n A 1 104 GLN 104 86 ? ? ? A . n A 1 105 GLU 105 87 ? ? ? A . n A 1 106 SER 106 88 ? ? ? A . n A 1 107 ALA 107 89 ? ? ? A . n A 1 108 GLU 108 90 ? ? ? A . n A 1 109 GLU 109 91 ? ? ? A . n A 1 110 ILE 110 92 92 ILE ILE A . n A 1 111 PRO 111 93 93 PRO PRO A . n A 1 112 ILE 112 94 94 ILE ILE A . n A 1 113 LEU 113 95 95 LEU LEU A . n A 1 114 ILE 114 96 96 ILE ILE A . n A 1 115 ILE 115 97 97 ILE ILE A . n A 1 116 GLU 116 98 98 GLU GLU A . n A 1 117 GLY 117 99 99 GLY GLY A . n A 1 118 PHE 118 100 100 PHE PHE A . n A 1 119 LEU 119 101 101 LEU LEU A . n A 1 120 LEU 120 102 102 LEU LEU A . n A 1 121 PHE 121 103 103 PHE PHE A . n A 1 122 ASN 122 104 104 ASN ASN A . n A 1 123 TYR 123 105 105 TYR TYR A . n A 1 124 LYS 124 106 106 LYS LYS A . n A 1 125 PRO 125 107 107 PRO PRO A . n A 1 126 LEU 126 108 108 LEU LEU A . n A 1 127 ASP 127 109 109 ASP ASP A . n A 1 128 THR 128 110 110 THR THR A . n A 1 129 ILE 129 111 111 ILE ILE A . n A 1 130 TRP 130 112 112 TRP TRP A . n A 1 131 ASN 131 113 113 ASN ASN A . n A 1 132 ARG 132 114 114 ARG ARG A . n A 1 133 SER 133 115 115 SER SER A . n A 1 134 TYR 134 116 116 TYR TYR A . n A 1 135 PHE 135 117 117 PHE PHE A . n A 1 136 LEU 136 118 118 LEU LEU A . n A 1 137 THR 137 119 119 THR THR A . n A 1 138 ILE 138 120 120 ILE ILE A . n A 1 139 PRO 139 121 121 PRO PRO A . n A 1 140 TYR 140 122 122 TYR TYR A . n A 1 141 GLU 141 123 123 GLU GLU A . n A 1 142 GLU 142 124 124 GLU GLU A . n A 1 143 CYS 143 125 125 CYS CYS A . n A 1 144 LYS 144 126 126 LYS LYS A . n A 1 145 ARG 145 127 127 ARG ARG A . n A 1 146 ARG 146 128 128 ARG ARG A . n A 1 147 ARG 147 129 129 ARG ARG A . n A 1 148 SER 148 130 130 SER SER A . n A 1 149 THR 149 131 131 THR THR A . n A 1 150 ARG 150 132 132 ARG ARG A . n A 1 151 VAL 151 133 133 VAL VAL A . n A 1 152 TYR 152 134 134 TYR TYR A . n A 1 153 GLN 153 135 135 GLN GLN A . n A 1 154 PRO 154 136 136 PRO PRO A . n A 1 155 PRO 155 137 137 PRO PRO A . n A 1 156 ASP 156 138 138 ASP ASP A . n A 1 157 SER 157 139 139 SER SER A . n A 1 158 PRO 158 140 140 PRO PRO A . n A 1 159 GLY 159 141 141 GLY GLY A . n A 1 160 TYR 160 142 142 TYR TYR A . n A 1 161 PHE 161 143 143 PHE PHE A . n A 1 162 ASP 162 144 144 ASP ASP A . n A 1 163 GLY 163 145 145 GLY GLY A . n A 1 164 HIS 164 146 146 HIS HIS A . n A 1 165 VAL 165 147 147 VAL VAL A . n A 1 166 TRP 166 148 148 TRP TRP A . n A 1 167 PRO 167 149 149 PRO PRO A . n A 1 168 MSE 168 150 150 MSE MSE A . n A 1 169 TYR 169 151 151 TYR TYR A . n A 1 170 LEU 170 152 152 LEU LEU A . n A 1 171 LYS 171 153 153 LYS LYS A . n A 1 172 TYR 172 154 154 TYR TYR A . n A 1 173 ARG 173 155 155 ARG ARG A . n A 1 174 GLN 174 156 156 GLN GLN A . n A 1 175 GLU 175 157 157 GLU GLU A . n A 1 176 MSE 176 158 158 MSE MSE A . n A 1 177 GLN 177 159 159 GLN GLN A . n A 1 178 ASP 178 160 160 ASP ASP A . n A 1 179 ILE 179 161 161 ILE ILE A . n A 1 180 THR 180 162 162 THR THR A . n A 1 181 TRP 181 163 163 TRP TRP A . n A 1 182 GLU 182 164 164 GLU GLU A . n A 1 183 VAL 183 165 165 VAL VAL A . n A 1 184 VAL 184 166 166 VAL VAL A . n A 1 185 TYR 185 167 167 TYR TYR A . n A 1 186 LEU 186 168 168 LEU LEU A . n A 1 187 ASP 187 169 169 ASP ASP A . n A 1 188 GLY 188 170 170 GLY GLY A . n A 1 189 THR 189 171 171 THR THR A . n A 1 190 LYS 190 172 172 LYS LYS A . n A 1 191 SER 191 173 173 SER SER A . n A 1 192 GLU 192 174 174 GLU GLU A . n A 1 193 GLU 193 175 175 GLU GLU A . n A 1 194 ASP 194 176 176 ASP ASP A . n A 1 195 LEU 195 177 177 LEU LEU A . n A 1 196 PHE 196 178 178 PHE PHE A . n A 1 197 LEU 197 179 179 LEU LEU A . n A 1 198 GLN 198 180 180 GLN GLN A . n A 1 199 VAL 199 181 181 VAL VAL A . n A 1 200 TYR 200 182 182 TYR TYR A . n A 1 201 GLU 201 183 183 GLU GLU A . n A 1 202 ASP 202 184 184 ASP ASP A . n A 1 203 LEU 203 185 185 LEU LEU A . n A 1 204 ILE 204 186 186 ILE ILE A . n A 1 205 GLN 205 187 187 GLN GLN A . n A 1 206 GLU 206 188 ? ? ? A . n A 1 207 LEU 207 189 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 1001 1001 MG MG A . C 3 ANP 1 1102 1102 ANP ANP A . D 4 NNR 1 1103 1103 NNR NNR A . E 5 HOH 1 201 201 HOH HOH A . E 5 HOH 2 202 202 HOH HOH A . E 5 HOH 3 203 203 HOH HOH A . E 5 HOH 4 204 204 HOH HOH A . E 5 HOH 5 205 205 HOH HOH A . E 5 HOH 6 206 206 HOH HOH A . E 5 HOH 7 207 207 HOH HOH A . E 5 HOH 8 208 208 HOH HOH A . E 5 HOH 9 209 209 HOH HOH A . E 5 HOH 10 210 210 HOH HOH A . E 5 HOH 11 211 211 HOH HOH A . E 5 HOH 12 212 212 HOH HOH A . E 5 HOH 13 213 213 HOH HOH A . E 5 HOH 14 214 214 HOH HOH A . E 5 HOH 15 215 215 HOH HOH A . E 5 HOH 16 216 216 HOH HOH A . E 5 HOH 17 217 217 HOH HOH A . E 5 HOH 18 218 218 HOH HOH A . E 5 HOH 19 219 219 HOH HOH A . E 5 HOH 20 220 220 HOH HOH A . E 5 HOH 21 221 221 HOH HOH A . E 5 HOH 22 222 222 HOH HOH A . E 5 HOH 23 223 223 HOH HOH A . E 5 HOH 24 224 224 HOH HOH A . E 5 HOH 25 225 225 HOH HOH A . E 5 HOH 26 226 226 HOH HOH A . E 5 HOH 27 227 227 HOH HOH A . E 5 HOH 28 228 228 HOH HOH A . E 5 HOH 29 229 229 HOH HOH A . E 5 HOH 30 230 230 HOH HOH A . E 5 HOH 31 231 231 HOH HOH A . E 5 HOH 32 232 232 HOH HOH A . E 5 HOH 33 233 233 HOH HOH A . E 5 HOH 34 234 234 HOH HOH A . E 5 HOH 35 235 235 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 81 A MSE 63 ? MET SELENOMETHIONINE 2 A MSE 84 A MSE 66 ? MET SELENOMETHIONINE 3 A MSE 85 A MSE 67 ? MET SELENOMETHIONINE 4 A MSE 92 A MSE 74 ? MET SELENOMETHIONINE 5 A MSE 168 A MSE 150 ? MET SELENOMETHIONINE 6 A MSE 176 A MSE 158 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 OD2 ? A ASP 54 ? A ASP 36 ? 1_555 90.8 ? 2 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? E HOH . ? A HOH 231 ? 1_555 87.0 ? 3 OD2 ? A ASP 54 ? A ASP 36 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? E HOH . ? A HOH 231 ? 1_555 88.0 ? 4 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? E HOH . ? A HOH 232 ? 1_555 86.6 ? 5 OD2 ? A ASP 54 ? A ASP 36 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? E HOH . ? A HOH 232 ? 1_555 91.6 ? 6 O ? E HOH . ? A HOH 231 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? E HOH . ? A HOH 232 ? 1_555 173.6 ? 7 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O1G ? C ANP . ? A ANP 1102 ? 1_555 177.9 ? 8 OD2 ? A ASP 54 ? A ASP 36 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O1G ? C ANP . ? A ANP 1102 ? 1_555 90.1 ? 9 O ? E HOH . ? A HOH 231 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O1G ? C ANP . ? A ANP 1102 ? 1_555 94.9 ? 10 O ? E HOH . ? A HOH 232 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O1G ? C ANP . ? A ANP 1102 ? 1_555 91.4 ? 11 OG1 ? A THR 35 ? A THR 17 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O2B ? C ANP . ? A ANP 1102 ? 1_555 85.3 ? 12 OD2 ? A ASP 54 ? A ASP 36 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O2B ? C ANP . ? A ANP 1102 ? 1_555 172.1 ? 13 O ? E HOH . ? A HOH 231 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O2B ? C ANP . ? A ANP 1102 ? 1_555 84.9 ? 14 O ? E HOH . ? A HOH 232 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O2B ? C ANP . ? A ANP 1102 ? 1_555 95.1 ? 15 O1G ? C ANP . ? A ANP 1102 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O2B ? C ANP . ? A ANP 1102 ? 1_555 94.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-08-14 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2023-08-30 5 'Structure model' 1 4 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_conn_type 9 4 'Structure model' struct_ref_seq_dif 10 4 'Structure model' struct_site 11 5 'Structure model' chem_comp_atom 12 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.value' 14 4 'Structure model' '_struct_conn.conn_type_id' 15 4 'Structure model' '_struct_conn.id' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 4 'Structure model' '_struct_conn_type.id' 31 4 'Structure model' '_struct_ref_seq_dif.details' 32 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 35 5 'Structure model' '_chem_comp_atom.atom_id' 36 5 'Structure model' '_chem_comp_bond.atom_id_2' # _pdbx_phasing_MR.entry_id 2QT0 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 27.240 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 27.240 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? other 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC refmac_5.2.0019 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ; BIOMOLECULE: 1 SEE REMARK 350 FOR THE PROGRAM GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN THIS ENTRY. AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS POLYPEPTIDE IS UNKNOWN. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 56 ? ? -105.47 42.09 2 1 HIS A 146 ? ? -132.45 -56.55 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 2 ? CG ? A LYS 20 CG 2 1 Y 1 A LYS 2 ? CD ? A LYS 20 CD 3 1 Y 1 A LYS 2 ? CE ? A LYS 20 CE 4 1 Y 1 A LYS 2 ? NZ ? A LYS 20 NZ 5 1 Y 1 A LYS 21 ? CD ? A LYS 39 CD 6 1 Y 1 A LYS 21 ? CE ? A LYS 39 CE 7 1 Y 1 A LYS 21 ? NZ ? A LYS 39 NZ 8 1 Y 1 A LYS 49 ? CD ? A LYS 67 CD 9 1 Y 1 A LYS 49 ? CE ? A LYS 67 CE 10 1 Y 1 A LYS 49 ? NZ ? A LYS 67 NZ 11 1 Y 1 A GLU 64 ? CD ? A GLU 82 CD 12 1 Y 1 A GLU 64 ? OE1 ? A GLU 82 OE1 13 1 Y 1 A GLU 64 ? OE2 ? A GLU 82 OE2 14 1 Y 1 A LYS 106 ? CG ? A LYS 124 CG 15 1 Y 1 A LYS 106 ? CD ? A LYS 124 CD 16 1 Y 1 A LYS 106 ? CE ? A LYS 124 CE 17 1 Y 1 A LYS 106 ? NZ ? A LYS 124 NZ 18 1 Y 1 A ARG 114 ? NE ? A ARG 132 NE 19 1 Y 1 A ARG 114 ? CZ ? A ARG 132 CZ 20 1 Y 1 A ARG 114 ? NH1 ? A ARG 132 NH1 21 1 Y 1 A ARG 114 ? NH2 ? A ARG 132 NH2 22 1 Y 1 A GLN 187 ? CG ? A GLN 205 CG 23 1 Y 1 A GLN 187 ? CD ? A GLN 205 CD 24 1 Y 1 A GLN 187 ? OE1 ? A GLN 205 OE1 25 1 Y 1 A GLN 187 ? NE2 ? A GLN 205 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -17 ? A MSE 1 2 1 Y 1 A GLY -16 ? A GLY 2 3 1 Y 1 A SER -15 ? A SER 3 4 1 Y 1 A SER -14 ? A SER 4 5 1 Y 1 A HIS -13 ? A HIS 5 6 1 Y 1 A HIS -12 ? A HIS 6 7 1 Y 1 A HIS -11 ? A HIS 7 8 1 Y 1 A HIS -10 ? A HIS 8 9 1 Y 1 A HIS -9 ? A HIS 9 10 1 Y 1 A HIS -8 ? A HIS 10 11 1 Y 1 A SER -7 ? A SER 11 12 1 Y 1 A SER -6 ? A SER 12 13 1 Y 1 A GLY -5 ? A GLY 13 14 1 Y 1 A LEU -4 ? A LEU 14 15 1 Y 1 A VAL -3 ? A VAL 15 16 1 Y 1 A PRO -2 ? A PRO 16 17 1 Y 1 A VAL 82 ? A VAL 100 18 1 Y 1 A SER 83 ? A SER 101 19 1 Y 1 A THR 84 ? A THR 102 20 1 Y 1 A ASP 85 ? A ASP 103 21 1 Y 1 A GLN 86 ? A GLN 104 22 1 Y 1 A GLU 87 ? A GLU 105 23 1 Y 1 A SER 88 ? A SER 106 24 1 Y 1 A ALA 89 ? A ALA 107 25 1 Y 1 A GLU 90 ? A GLU 108 26 1 Y 1 A GLU 91 ? A GLU 109 27 1 Y 1 A GLU 188 ? A GLU 206 28 1 Y 1 A LEU 189 ? A LEU 207 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ANP PG P N N 14 ANP O1G O N N 15 ANP O2G O N N 16 ANP O3G O N N 17 ANP PB P N N 18 ANP O1B O N N 19 ANP O2B O N N 20 ANP N3B N N N 21 ANP PA P N N 22 ANP O1A O N N 23 ANP O2A O N N 24 ANP O3A O N N 25 ANP "O5'" O N N 26 ANP "C5'" C N N 27 ANP "C4'" C N R 28 ANP "O4'" O N N 29 ANP "C3'" C N S 30 ANP "O3'" O N N 31 ANP "C2'" C N R 32 ANP "O2'" O N N 33 ANP "C1'" C N R 34 ANP N9 N Y N 35 ANP C8 C Y N 36 ANP N7 N Y N 37 ANP C5 C Y N 38 ANP C6 C Y N 39 ANP N6 N N N 40 ANP N1 N Y N 41 ANP C2 C Y N 42 ANP N3 N Y N 43 ANP C4 C Y N 44 ANP HOG2 H N N 45 ANP HOG3 H N N 46 ANP HOB2 H N N 47 ANP HNB1 H N N 48 ANP HOA2 H N N 49 ANP "H5'1" H N N 50 ANP "H5'2" H N N 51 ANP "H4'" H N N 52 ANP "H3'" H N N 53 ANP "HO3'" H N N 54 ANP "H2'" H N N 55 ANP "HO2'" H N N 56 ANP "H1'" H N N 57 ANP H8 H N N 58 ANP HN61 H N N 59 ANP HN62 H N N 60 ANP H2 H N N 61 ARG N N N N 62 ARG CA C N S 63 ARG C C N N 64 ARG O O N N 65 ARG CB C N N 66 ARG CG C N N 67 ARG CD C N N 68 ARG NE N N N 69 ARG CZ C N N 70 ARG NH1 N N N 71 ARG NH2 N N N 72 ARG OXT O N N 73 ARG H H N N 74 ARG H2 H N N 75 ARG HA H N N 76 ARG HB2 H N N 77 ARG HB3 H N N 78 ARG HG2 H N N 79 ARG HG3 H N N 80 ARG HD2 H N N 81 ARG HD3 H N N 82 ARG HE H N N 83 ARG HH11 H N N 84 ARG HH12 H N N 85 ARG HH21 H N N 86 ARG HH22 H N N 87 ARG HXT H N N 88 ASN N N N N 89 ASN CA C N S 90 ASN C C N N 91 ASN O O N N 92 ASN CB C N N 93 ASN CG C N N 94 ASN OD1 O N N 95 ASN ND2 N N N 96 ASN OXT O N N 97 ASN H H N N 98 ASN H2 H N N 99 ASN HA H N N 100 ASN HB2 H N N 101 ASN HB3 H N N 102 ASN HD21 H N N 103 ASN HD22 H N N 104 ASN HXT H N N 105 ASP N N N N 106 ASP CA C N S 107 ASP C C N N 108 ASP O O N N 109 ASP CB C N N 110 ASP CG C N N 111 ASP OD1 O N N 112 ASP OD2 O N N 113 ASP OXT O N N 114 ASP H H N N 115 ASP H2 H N N 116 ASP HA H N N 117 ASP HB2 H N N 118 ASP HB3 H N N 119 ASP HD2 H N N 120 ASP HXT H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MG MG MG N N 278 MSE N N N N 279 MSE CA C N S 280 MSE C C N N 281 MSE O O N N 282 MSE OXT O N N 283 MSE CB C N N 284 MSE CG C N N 285 MSE SE SE N N 286 MSE CE C N N 287 MSE H H N N 288 MSE H2 H N N 289 MSE HA H N N 290 MSE HXT H N N 291 MSE HB2 H N N 292 MSE HB3 H N N 293 MSE HG2 H N N 294 MSE HG3 H N N 295 MSE HE1 H N N 296 MSE HE2 H N N 297 MSE HE3 H N N 298 NNR O2R O N N 299 NNR C2R C N R 300 NNR C3R C N S 301 NNR O3R O N N 302 NNR C4R C N R 303 NNR C5R C N N 304 NNR O5R O N N 305 NNR O4R O N N 306 NNR C1R C N R 307 NNR N1 N Y N 308 NNR C2 C Y N 309 NNR C6 C Y N 310 NNR C5 C Y N 311 NNR C4 C Y N 312 NNR C3 C Y N 313 NNR C7 C N N 314 NNR O7 O N N 315 NNR N7 N N N 316 NNR HO2R H N N 317 NNR H2R H N N 318 NNR H3R H N N 319 NNR HO3R H N N 320 NNR H4R H N N 321 NNR H5R1 H N N 322 NNR H5R2 H N N 323 NNR HO5R H N N 324 NNR H1R H N N 325 NNR H2 H N N 326 NNR H6 H N N 327 NNR H5 H N N 328 NNR H4 H N N 329 NNR HN71 H N N 330 NNR HN72 H N N 331 PHE N N N N 332 PHE CA C N S 333 PHE C C N N 334 PHE O O N N 335 PHE CB C N N 336 PHE CG C Y N 337 PHE CD1 C Y N 338 PHE CD2 C Y N 339 PHE CE1 C Y N 340 PHE CE2 C Y N 341 PHE CZ C Y N 342 PHE OXT O N N 343 PHE H H N N 344 PHE H2 H N N 345 PHE HA H N N 346 PHE HB2 H N N 347 PHE HB3 H N N 348 PHE HD1 H N N 349 PHE HD2 H N N 350 PHE HE1 H N N 351 PHE HE2 H N N 352 PHE HZ H N N 353 PHE HXT H N N 354 PRO N N N N 355 PRO CA C N S 356 PRO C C N N 357 PRO O O N N 358 PRO CB C N N 359 PRO CG C N N 360 PRO CD C N N 361 PRO OXT O N N 362 PRO H H N N 363 PRO HA H N N 364 PRO HB2 H N N 365 PRO HB3 H N N 366 PRO HG2 H N N 367 PRO HG3 H N N 368 PRO HD2 H N N 369 PRO HD3 H N N 370 PRO HXT H N N 371 SER N N N N 372 SER CA C N S 373 SER C C N N 374 SER O O N N 375 SER CB C N N 376 SER OG O N N 377 SER OXT O N N 378 SER H H N N 379 SER H2 H N N 380 SER HA H N N 381 SER HB2 H N N 382 SER HB3 H N N 383 SER HG H N N 384 SER HXT H N N 385 THR N N N N 386 THR CA C N S 387 THR C C N N 388 THR O O N N 389 THR CB C N R 390 THR OG1 O N N 391 THR CG2 C N N 392 THR OXT O N N 393 THR H H N N 394 THR H2 H N N 395 THR HA H N N 396 THR HB H N N 397 THR HG1 H N N 398 THR HG21 H N N 399 THR HG22 H N N 400 THR HG23 H N N 401 THR HXT H N N 402 TRP N N N N 403 TRP CA C N S 404 TRP C C N N 405 TRP O O N N 406 TRP CB C N N 407 TRP CG C Y N 408 TRP CD1 C Y N 409 TRP CD2 C Y N 410 TRP NE1 N Y N 411 TRP CE2 C Y N 412 TRP CE3 C Y N 413 TRP CZ2 C Y N 414 TRP CZ3 C Y N 415 TRP CH2 C Y N 416 TRP OXT O N N 417 TRP H H N N 418 TRP H2 H N N 419 TRP HA H N N 420 TRP HB2 H N N 421 TRP HB3 H N N 422 TRP HD1 H N N 423 TRP HE1 H N N 424 TRP HE3 H N N 425 TRP HZ2 H N N 426 TRP HZ3 H N N 427 TRP HH2 H N N 428 TRP HXT H N N 429 TYR N N N N 430 TYR CA C N S 431 TYR C C N N 432 TYR O O N N 433 TYR CB C N N 434 TYR CG C Y N 435 TYR CD1 C Y N 436 TYR CD2 C Y N 437 TYR CE1 C Y N 438 TYR CE2 C Y N 439 TYR CZ C Y N 440 TYR OH O N N 441 TYR OXT O N N 442 TYR H H N N 443 TYR H2 H N N 444 TYR HA H N N 445 TYR HB2 H N N 446 TYR HB3 H N N 447 TYR HD1 H N N 448 TYR HD2 H N N 449 TYR HE1 H N N 450 TYR HE2 H N N 451 TYR HH H N N 452 TYR HXT H N N 453 VAL N N N N 454 VAL CA C N S 455 VAL C C N N 456 VAL O O N N 457 VAL CB C N N 458 VAL CG1 C N N 459 VAL CG2 C N N 460 VAL OXT O N N 461 VAL H H N N 462 VAL H2 H N N 463 VAL HA H N N 464 VAL HB H N N 465 VAL HG11 H N N 466 VAL HG12 H N N 467 VAL HG13 H N N 468 VAL HG21 H N N 469 VAL HG22 H N N 470 VAL HG23 H N N 471 VAL HXT H N N 472 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ANP PG O1G doub N N 13 ANP PG O2G sing N N 14 ANP PG O3G sing N N 15 ANP PG N3B sing N N 16 ANP O2G HOG2 sing N N 17 ANP O3G HOG3 sing N N 18 ANP PB O1B doub N N 19 ANP PB O2B sing N N 20 ANP PB N3B sing N N 21 ANP PB O3A sing N N 22 ANP O2B HOB2 sing N N 23 ANP N3B HNB1 sing N N 24 ANP PA O1A doub N N 25 ANP PA O2A sing N N 26 ANP PA O3A sing N N 27 ANP PA "O5'" sing N N 28 ANP O2A HOA2 sing N N 29 ANP "O5'" "C5'" sing N N 30 ANP "C5'" "C4'" sing N N 31 ANP "C5'" "H5'1" sing N N 32 ANP "C5'" "H5'2" sing N N 33 ANP "C4'" "O4'" sing N N 34 ANP "C4'" "C3'" sing N N 35 ANP "C4'" "H4'" sing N N 36 ANP "O4'" "C1'" sing N N 37 ANP "C3'" "O3'" sing N N 38 ANP "C3'" "C2'" sing N N 39 ANP "C3'" "H3'" sing N N 40 ANP "O3'" "HO3'" sing N N 41 ANP "C2'" "O2'" sing N N 42 ANP "C2'" "C1'" sing N N 43 ANP "C2'" "H2'" sing N N 44 ANP "O2'" "HO2'" sing N N 45 ANP "C1'" N9 sing N N 46 ANP "C1'" "H1'" sing N N 47 ANP N9 C8 sing Y N 48 ANP N9 C4 sing Y N 49 ANP C8 N7 doub Y N 50 ANP C8 H8 sing N N 51 ANP N7 C5 sing Y N 52 ANP C5 C6 sing Y N 53 ANP C5 C4 doub Y N 54 ANP C6 N6 sing N N 55 ANP C6 N1 doub Y N 56 ANP N6 HN61 sing N N 57 ANP N6 HN62 sing N N 58 ANP N1 C2 sing Y N 59 ANP C2 N3 doub Y N 60 ANP C2 H2 sing N N 61 ANP N3 C4 sing Y N 62 ARG N CA sing N N 63 ARG N H sing N N 64 ARG N H2 sing N N 65 ARG CA C sing N N 66 ARG CA CB sing N N 67 ARG CA HA sing N N 68 ARG C O doub N N 69 ARG C OXT sing N N 70 ARG CB CG sing N N 71 ARG CB HB2 sing N N 72 ARG CB HB3 sing N N 73 ARG CG CD sing N N 74 ARG CG HG2 sing N N 75 ARG CG HG3 sing N N 76 ARG CD NE sing N N 77 ARG CD HD2 sing N N 78 ARG CD HD3 sing N N 79 ARG NE CZ sing N N 80 ARG NE HE sing N N 81 ARG CZ NH1 sing N N 82 ARG CZ NH2 doub N N 83 ARG NH1 HH11 sing N N 84 ARG NH1 HH12 sing N N 85 ARG NH2 HH21 sing N N 86 ARG NH2 HH22 sing N N 87 ARG OXT HXT sing N N 88 ASN N CA sing N N 89 ASN N H sing N N 90 ASN N H2 sing N N 91 ASN CA C sing N N 92 ASN CA CB sing N N 93 ASN CA HA sing N N 94 ASN C O doub N N 95 ASN C OXT sing N N 96 ASN CB CG sing N N 97 ASN CB HB2 sing N N 98 ASN CB HB3 sing N N 99 ASN CG OD1 doub N N 100 ASN CG ND2 sing N N 101 ASN ND2 HD21 sing N N 102 ASN ND2 HD22 sing N N 103 ASN OXT HXT sing N N 104 ASP N CA sing N N 105 ASP N H sing N N 106 ASP N H2 sing N N 107 ASP CA C sing N N 108 ASP CA CB sing N N 109 ASP CA HA sing N N 110 ASP C O doub N N 111 ASP C OXT sing N N 112 ASP CB CG sing N N 113 ASP CB HB2 sing N N 114 ASP CB HB3 sing N N 115 ASP CG OD1 doub N N 116 ASP CG OD2 sing N N 117 ASP OD2 HD2 sing N N 118 ASP OXT HXT sing N N 119 CYS N CA sing N N 120 CYS N H sing N N 121 CYS N H2 sing N N 122 CYS CA C sing N N 123 CYS CA CB sing N N 124 CYS CA HA sing N N 125 CYS C O doub N N 126 CYS C OXT sing N N 127 CYS CB SG sing N N 128 CYS CB HB2 sing N N 129 CYS CB HB3 sing N N 130 CYS SG HG sing N N 131 CYS OXT HXT sing N N 132 GLN N CA sing N N 133 GLN N H sing N N 134 GLN N H2 sing N N 135 GLN CA C sing N N 136 GLN CA CB sing N N 137 GLN CA HA sing N N 138 GLN C O doub N N 139 GLN C OXT sing N N 140 GLN CB CG sing N N 141 GLN CB HB2 sing N N 142 GLN CB HB3 sing N N 143 GLN CG CD sing N N 144 GLN CG HG2 sing N N 145 GLN CG HG3 sing N N 146 GLN CD OE1 doub N N 147 GLN CD NE2 sing N N 148 GLN NE2 HE21 sing N N 149 GLN NE2 HE22 sing N N 150 GLN OXT HXT sing N N 151 GLU N CA sing N N 152 GLU N H sing N N 153 GLU N H2 sing N N 154 GLU CA C sing N N 155 GLU CA CB sing N N 156 GLU CA HA sing N N 157 GLU C O doub N N 158 GLU C OXT sing N N 159 GLU CB CG sing N N 160 GLU CB HB2 sing N N 161 GLU CB HB3 sing N N 162 GLU CG CD sing N N 163 GLU CG HG2 sing N N 164 GLU CG HG3 sing N N 165 GLU CD OE1 doub N N 166 GLU CD OE2 sing N N 167 GLU OE2 HE2 sing N N 168 GLU OXT HXT sing N N 169 GLY N CA sing N N 170 GLY N H sing N N 171 GLY N H2 sing N N 172 GLY CA C sing N N 173 GLY CA HA2 sing N N 174 GLY CA HA3 sing N N 175 GLY C O doub N N 176 GLY C OXT sing N N 177 GLY OXT HXT sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MSE N CA sing N N 268 MSE N H sing N N 269 MSE N H2 sing N N 270 MSE CA C sing N N 271 MSE CA CB sing N N 272 MSE CA HA sing N N 273 MSE C O doub N N 274 MSE C OXT sing N N 275 MSE OXT HXT sing N N 276 MSE CB CG sing N N 277 MSE CB HB2 sing N N 278 MSE CB HB3 sing N N 279 MSE CG SE sing N N 280 MSE CG HG2 sing N N 281 MSE CG HG3 sing N N 282 MSE SE CE sing N N 283 MSE CE HE1 sing N N 284 MSE CE HE2 sing N N 285 MSE CE HE3 sing N N 286 NNR C5 C6 doub Y N 287 NNR C5 C4 sing Y N 288 NNR C6 N1 sing Y N 289 NNR C4 C3 doub Y N 290 NNR O2R C2R sing N N 291 NNR N1 C1R sing N N 292 NNR N1 C2 doub Y N 293 NNR C3 C2 sing Y N 294 NNR C3 C7 sing N N 295 NNR C1R C2R sing N N 296 NNR C1R O4R sing N N 297 NNR C2R C3R sing N N 298 NNR C7 O7 doub N N 299 NNR C7 N7 sing N N 300 NNR O3R C3R sing N N 301 NNR O4R C4R sing N N 302 NNR C3R C4R sing N N 303 NNR C4R C5R sing N N 304 NNR C5R O5R sing N N 305 NNR O2R HO2R sing N N 306 NNR C2R H2R sing N N 307 NNR C3R H3R sing N N 308 NNR O3R HO3R sing N N 309 NNR C4R H4R sing N N 310 NNR C5R H5R1 sing N N 311 NNR C5R H5R2 sing N N 312 NNR O5R HO5R sing N N 313 NNR C1R H1R sing N N 314 NNR C2 H2 sing N N 315 NNR C6 H6 sing N N 316 NNR C5 H5 sing N N 317 NNR C4 H4 sing N N 318 NNR N7 HN71 sing N N 319 NNR N7 HN72 sing N N 320 PHE N CA sing N N 321 PHE N H sing N N 322 PHE N H2 sing N N 323 PHE CA C sing N N 324 PHE CA CB sing N N 325 PHE CA HA sing N N 326 PHE C O doub N N 327 PHE C OXT sing N N 328 PHE CB CG sing N N 329 PHE CB HB2 sing N N 330 PHE CB HB3 sing N N 331 PHE CG CD1 doub Y N 332 PHE CG CD2 sing Y N 333 PHE CD1 CE1 sing Y N 334 PHE CD1 HD1 sing N N 335 PHE CD2 CE2 doub Y N 336 PHE CD2 HD2 sing N N 337 PHE CE1 CZ doub Y N 338 PHE CE1 HE1 sing N N 339 PHE CE2 CZ sing Y N 340 PHE CE2 HE2 sing N N 341 PHE CZ HZ sing N N 342 PHE OXT HXT sing N N 343 PRO N CA sing N N 344 PRO N CD sing N N 345 PRO N H sing N N 346 PRO CA C sing N N 347 PRO CA CB sing N N 348 PRO CA HA sing N N 349 PRO C O doub N N 350 PRO C OXT sing N N 351 PRO CB CG sing N N 352 PRO CB HB2 sing N N 353 PRO CB HB3 sing N N 354 PRO CG CD sing N N 355 PRO CG HG2 sing N N 356 PRO CG HG3 sing N N 357 PRO CD HD2 sing N N 358 PRO CD HD3 sing N N 359 PRO OXT HXT sing N N 360 SER N CA sing N N 361 SER N H sing N N 362 SER N H2 sing N N 363 SER CA C sing N N 364 SER CA CB sing N N 365 SER CA HA sing N N 366 SER C O doub N N 367 SER C OXT sing N N 368 SER CB OG sing N N 369 SER CB HB2 sing N N 370 SER CB HB3 sing N N 371 SER OG HG sing N N 372 SER OXT HXT sing N N 373 THR N CA sing N N 374 THR N H sing N N 375 THR N H2 sing N N 376 THR CA C sing N N 377 THR CA CB sing N N 378 THR CA HA sing N N 379 THR C O doub N N 380 THR C OXT sing N N 381 THR CB OG1 sing N N 382 THR CB CG2 sing N N 383 THR CB HB sing N N 384 THR OG1 HG1 sing N N 385 THR CG2 HG21 sing N N 386 THR CG2 HG22 sing N N 387 THR CG2 HG23 sing N N 388 THR OXT HXT sing N N 389 TRP N CA sing N N 390 TRP N H sing N N 391 TRP N H2 sing N N 392 TRP CA C sing N N 393 TRP CA CB sing N N 394 TRP CA HA sing N N 395 TRP C O doub N N 396 TRP C OXT sing N N 397 TRP CB CG sing N N 398 TRP CB HB2 sing N N 399 TRP CB HB3 sing N N 400 TRP CG CD1 doub Y N 401 TRP CG CD2 sing Y N 402 TRP CD1 NE1 sing Y N 403 TRP CD1 HD1 sing N N 404 TRP CD2 CE2 doub Y N 405 TRP CD2 CE3 sing Y N 406 TRP NE1 CE2 sing Y N 407 TRP NE1 HE1 sing N N 408 TRP CE2 CZ2 sing Y N 409 TRP CE3 CZ3 doub Y N 410 TRP CE3 HE3 sing N N 411 TRP CZ2 CH2 doub Y N 412 TRP CZ2 HZ2 sing N N 413 TRP CZ3 CH2 sing Y N 414 TRP CZ3 HZ3 sing N N 415 TRP CH2 HH2 sing N N 416 TRP OXT HXT sing N N 417 TYR N CA sing N N 418 TYR N H sing N N 419 TYR N H2 sing N N 420 TYR CA C sing N N 421 TYR CA CB sing N N 422 TYR CA HA sing N N 423 TYR C O doub N N 424 TYR C OXT sing N N 425 TYR CB CG sing N N 426 TYR CB HB2 sing N N 427 TYR CB HB3 sing N N 428 TYR CG CD1 doub Y N 429 TYR CG CD2 sing Y N 430 TYR CD1 CE1 sing Y N 431 TYR CD1 HD1 sing N N 432 TYR CD2 CE2 doub Y N 433 TYR CD2 HD2 sing N N 434 TYR CE1 CZ doub Y N 435 TYR CE1 HE1 sing N N 436 TYR CE2 CZ sing Y N 437 TYR CE2 HE2 sing N N 438 TYR CZ OH sing N N 439 TYR OH HH sing N N 440 TYR OXT HXT sing N N 441 VAL N CA sing N N 442 VAL N H sing N N 443 VAL N H2 sing N N 444 VAL CA C sing N N 445 VAL CA CB sing N N 446 VAL CA HA sing N N 447 VAL C O doub N N 448 VAL C OXT sing N N 449 VAL CB CG1 sing N N 450 VAL CB CG2 sing N N 451 VAL CB HB sing N N 452 VAL CG1 HG11 sing N N 453 VAL CG1 HG12 sing N N 454 VAL CG1 HG13 sing N N 455 VAL CG2 HG21 sing N N 456 VAL CG2 HG22 sing N N 457 VAL CG2 HG23 sing N N 458 VAL OXT HXT sing N N 459 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' ANP 4 'Nicotinamide riboside' NNR 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2P0E _pdbx_initial_refinement_model.details 'PDB entry 2P0E' #