HEADER OXIDOREDUCTASE 01-AUG-07 2QTD TITLE CRYSTAL STRUCTURE OF A PUTATIVE DINITROGENASE (MJ0327) FROM TITLE 2 METHANOCALDOCOCCUS JANNASCHII DSM AT 1.70 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN MJ0327; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII DSM 2661; SOURCE 3 ORGANISM_TAXID: 243232; SOURCE 4 STRAIN: DSM 2661, JAL-1, JCM 10045, NBRC 100440; SOURCE 5 ATCC: 43067; SOURCE 6 GENE: NP_247299.1, MJ0327; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS RIBONUCLEASE H-LIKE MOTIF FOLD, IRON-MOLYBDENUM COFACTOR, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-2, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 8 25-JAN-23 2QTD 1 REMARK SEQADV REVDAT 7 24-JUL-19 2QTD 1 REMARK LINK REVDAT 6 25-OCT-17 2QTD 1 REMARK REVDAT 5 13-JUL-11 2QTD 1 VERSN REVDAT 4 13-APR-11 2QTD 1 JRNL REVDAT 3 23-MAR-11 2QTD 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2QTD 1 VERSN REVDAT 1 21-AUG-07 2QTD 0 JRNL AUTH K.JAUDZEMS,M.GERALT,P.SERRANO,B.MOHANTY,R.HORST,B.PEDRINI, JRNL AUTH 2 M.A.ELSLIGER,I.A.WILSON,K.WUTHRICH JRNL TITL NMR STRUCTURE OF THE PROTEIN NP_247299.1: COMPARISON WITH JRNL TITL 2 THE CRYSTAL STRUCTURE. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 66 1367 2010 JRNL REFN ESSN 1744-3091 JRNL PMID 20944234 JRNL DOI 10.1107/S1744309110005890 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 12479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 584 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 806 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 814 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 65 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 28.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.63000 REMARK 3 B22 (A**2) : -2.20000 REMARK 3 B33 (A**2) : 1.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.123 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.842 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 923 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 651 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1228 ; 1.814 ; 2.004 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1622 ; 1.278 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 117 ; 6.652 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 39 ;40.205 ;27.179 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 174 ;11.860 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ; 0.679 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 138 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 968 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 153 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 152 ; 0.178 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 581 ; 0.142 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 407 ; 0.168 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 487 ; 0.083 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 105 ; 0.155 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.185 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 28 ; 0.190 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.327 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 616 ; 2.223 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 217 ; 0.587 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 900 ; 2.785 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 405 ; 5.278 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 320 ; 7.280 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): 13.8667 1.0359 -17.3354 REMARK 3 T TENSOR REMARK 3 T11: -0.0782 T22: -0.0539 REMARK 3 T33: -0.0971 T12: -0.0022 REMARK 3 T13: -0.0022 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 2.2766 L22: 7.5134 REMARK 3 L33: 0.9009 L12: 1.0335 REMARK 3 L13: 0.6794 L23: 0.6823 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: 0.0509 S13: 0.0319 REMARK 3 S21: -0.0027 S22: 0.0151 S23: 0.0581 REMARK 3 S31: -0.0533 S32: -0.0555 S33: -0.0155 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO REMARK 3 PARTIAL S-MET INCORPORATION. REMARK 3 3. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. REMARK 3 4. SEVEN PG4 AND ONE TRIS MOLECULE(S) REMARK 3 HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. REMARK 4 REMARK 4 2QTD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000044030. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97883, 0.97916 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 (HORIZONTAL FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12524 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 28.262 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.03600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.32000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 50.0% PEG 200, 0.1M TRIS-HCL REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.93000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.26500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.06000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.26500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.93000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.06000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS REMARK 300 THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT REMARK 300 OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 45 CG CD OE1 OE2 REMARK 470 LYS A 49 NZ REMARK 470 LYS A 53 CE NZ REMARK 470 GLU A 67 CG CD OE1 OE2 REMARK 470 LYS A 70 CD CE NZ REMARK 470 LYS A 75 CE NZ REMARK 470 LYS A 88 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 54 O3 TRS A 105 3644 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 A 106 REMARK 610 PG4 A 107 REMARK 610 PG4 A 108 REMARK 610 PG4 A 109 REMARK 610 PG4 A 111 REMARK 610 PG4 A 112 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 111 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 112 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 376479 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE FOLLOWED BY THE TARGET SEQUENCE. DBREF 2QTD A 1 104 UNP Q57773 Y327_METJA 1 104 SEQADV 2QTD GLY A 0 UNP Q57773 EXPRESSION TAG SEQRES 1 A 105 GLY MSE ILE ASN MSE LYS VAL ALA ILE SER MSE ASP VAL SEQRES 2 A 105 ASP LYS ILE SER ASN SER PHE GLU ASP CYS LYS TYR PHE SEQRES 3 A 105 LEU ILE VAL ARG ILE ASP ASP ASN GLU VAL LYS SER THR SEQRES 4 A 105 LYS VAL ILE PHE ASN ASP GLU SER GLY LYS LYS SER ILE SEQRES 5 A 105 VAL LYS GLU ASN VAL ASN ALA ILE ILE CYS LYS ASN ILE SEQRES 6 A 105 SER GLU GLU ASN TYR LYS LYS PHE SER LYS LYS ILE GLU SEQRES 7 A 105 ILE TYR HIS ALA GLU GLY ASP ASP VAL ASP LYS ASN ILE SEQRES 8 A 105 SER LEU PHE ILE GLU GLY GLU LEU SER LYS ILE SER ASN SEQRES 9 A 105 PRO MODRES 2QTD MSE A 1 MET SELENOMETHIONINE MODRES 2QTD MSE A 4 MET SELENOMETHIONINE MODRES 2QTD MSE A 10 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 4 13 HET MSE A 10 8 HET TRS A 105 8 HET PG4 A 106 11 HET PG4 A 107 8 HET PG4 A 108 7 HET PG4 A 109 7 HET PG4 A 110 13 HET PG4 A 111 5 HET PG4 A 112 8 HETNAM MSE SELENOMETHIONINE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN TRS TRIS BUFFER FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 TRS C4 H12 N O3 1+ FORMUL 3 PG4 7(C8 H18 O5) FORMUL 10 HOH *65(H2 O) HELIX 1 1 ASP A 44 GLU A 54 1 11 HELIX 2 2 SER A 65 LYS A 74 1 10 HELIX 3 3 ASP A 85 GLU A 95 1 11 SHEET 1 A 5 GLU A 34 PHE A 42 0 SHEET 2 A 5 TYR A 24 ASP A 31 -1 N ASP A 31 O GLU A 34 SHEET 3 A 5 MSE A 4 MSE A 10 -1 N MSE A 4 O ILE A 30 SHEET 4 A 5 ALA A 58 CYS A 61 1 O ILE A 60 N ALA A 7 SHEET 5 A 5 GLU A 77 HIS A 80 1 O TYR A 79 N ILE A 59 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C ASN A 3 N MSE A 4 1555 1555 1.35 LINK C MSE A 4 N LYS A 5 1555 1555 1.33 LINK C SER A 9 N MSE A 10 1555 1555 1.33 LINK C MSE A 10 N ASP A 11 1555 1555 1.34 SITE 1 AC1 10 LYS A 5 ILE A 27 ARG A 29 SER A 37 SITE 2 AC1 10 THR A 38 GLU A 54 SER A 99 PG4 A 107 SITE 3 AC1 10 HOH A 130 HOH A 167 SITE 1 AC2 5 ASP A 21 ASN A 55 VAL A 56 ASN A 57 SITE 2 AC2 5 LYS A 75 SITE 1 AC3 7 LYS A 5 ARG A 29 GLU A 54 GLU A 82 SITE 2 AC3 7 TRS A 105 HOH A 120 HOH A 153 SITE 1 AC4 8 MSE A 4 TYR A 79 LEU A 92 PHE A 93 SITE 2 AC4 8 GLY A 96 GLU A 97 LEU A 98 HOH A 155 SITE 1 AC5 6 ASP A 87 ILE A 90 SER A 91 ILE A 94 SITE 2 AC5 6 GLU A 95 HOH A 175 SITE 1 AC6 5 LYS A 23 PHE A 42 SER A 73 LYS A 74 SITE 2 AC6 5 LYS A 75 SITE 1 AC7 2 VAL A 12 PHE A 42 SITE 1 AC8 2 TYR A 24 ASP A 87 CRYST1 35.860 54.120 56.530 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027886 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017690 0.00000 HETATM 1 N MSE A 1 26.270 2.367 -0.791 1.00 48.27 N HETATM 2 CA MSE A 1 26.311 1.435 -1.958 1.00 49.66 C HETATM 3 C MSE A 1 24.905 1.115 -2.451 1.00 45.62 C HETATM 4 O MSE A 1 23.989 0.950 -1.639 1.00 45.43 O HETATM 5 CB MSE A 1 26.954 0.124 -1.557 1.00 51.11 C HETATM 6 CG MSE A 1 28.193 0.250 -0.703 1.00 53.08 C HETATM 7 SE MSE A 1 29.014 -1.489 -0.783 0.75 57.07 SE HETATM 8 CE MSE A 1 29.884 -1.418 -2.582 1.00 49.23 C