HEADER STRUCTURAL PROTEIN 03-AUG-07 2QU4 TITLE MODEL FOR BACTERIAL PARM FILAMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMID SEGREGATION PROTEIN PARM; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN STBA, PARA LOCUS 36 KDA PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562 KEYWDS FILAMENT MODEL, ACTIN-LIKE PROTEIN, HELICAL POLYMER, PLASMID, PLASMID KEYWDS 2 PARTITION, STRUCTURAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR A.ORLOVA,E.C.GARNER,V.E.GALKIN,J.HEUSER,R.D.MULLINS,E.H.EGELMAN REVDAT 4 21-FEB-24 2QU4 1 REMARK REVDAT 3 24-FEB-09 2QU4 1 VERSN REVDAT 2 16-OCT-07 2QU4 1 JRNL REVDAT 1 18-SEP-07 2QU4 0 JRNL AUTH A.ORLOVA,E.C.GARNER,V.E.GALKIN,J.HEUSER,R.D.MULLINS, JRNL AUTH 2 E.H.EGELMAN JRNL TITL THE STRUCTURE OF BACTERIAL PARM FILAMENTS. JRNL REF NAT.STRUCT.MOL.BIOL. V. 14 921 2007 JRNL REFN ISSN 1545-9993 JRNL PMID 17873883 JRNL DOI 10.1038/NSMB1300 REMARK 2 REMARK 2 RESOLUTION. 16.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1MWM REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 2.400 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 16.00 REMARK 3 NUMBER OF PARTICLES : 3351 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: TMV REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 2QU4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044057. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : PLASMID SEGREGATION PROTEIN REMARK 245 PARM REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : NULL REMARK 245 SAMPLE DETAILS : HELICAL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI 20 REMARK 245 DETECTOR TYPE : GENERIC FILM REMARK 245 MINIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 4000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : NULL REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 50000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: REMARK 300 ROTATION PER SUBUNIT (TWIST) = 165.43 DEGREES REMARK 300 RISE PER SUBUNIT (HEIGHT) = 25.00 ANGSTROMS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 -0.294874 0.955536 0.000000 0.00000 REMARK 350 BIOMT2 1 -0.955536 -0.294874 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 -125.00000 REMARK 350 BIOMT1 2 0.525769 -0.850628 0.000000 0.00000 REMARK 350 BIOMT2 2 0.850628 0.525769 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -100.00000 REMARK 350 BIOMT1 3 -0.722847 0.691009 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.691009 -0.722847 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -75.00000 REMARK 350 BIOMT1 4 0.873432 -0.486945 0.000000 0.00000 REMARK 350 BIOMT2 4 0.486945 0.873432 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -50.00000 REMARK 350 BIOMT1 5 -0.967841 0.251563 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.251563 -0.967841 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 -25.00000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.967841 -0.251563 0.000000 0.00000 REMARK 350 BIOMT2 7 0.251563 -0.967841 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 1.000000 25.00000 REMARK 350 BIOMT1 8 0.873432 0.486945 0.000000 0.00000 REMARK 350 BIOMT2 8 -0.486945 0.873432 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 1.000000 50.00000 REMARK 350 BIOMT1 9 -0.722847 -0.691009 0.000000 0.00000 REMARK 350 BIOMT2 9 0.691009 -0.722847 0.000000 0.00000 REMARK 350 BIOMT3 9 0.000000 0.000000 1.000000 75.00000 REMARK 350 BIOMT1 10 0.525769 0.850628 0.000000 0.00000 REMARK 350 BIOMT2 10 -0.850628 0.525769 0.000000 0.00000 REMARK 350 BIOMT3 10 0.000000 0.000000 1.000000 100.00000 DBREF 2QU4 A 1 320 UNP P11904 PARM_ECOLI 1 320 SEQRES 1 A 320 MET LEU VAL PHE ILE ASP ASP GLY SER THR ASN ILE LYS SEQRES 2 A 320 LEU GLN TRP GLN GLU SER ASP GLY THR ILE LYS GLN HIS SEQRES 3 A 320 ILE SER PRO ASN SER PHE LYS ARG GLU TRP ALA VAL SER SEQRES 4 A 320 PHE GLY ASP LYS LYS VAL PHE ASN TYR THR LEU ASN GLY SEQRES 5 A 320 GLU GLN TYR SER PHE ASP PRO ILE SER PRO ASP ALA VAL SEQRES 6 A 320 VAL THR THR ASN ILE ALA TRP GLN TYR SER ASP VAL ASN SEQRES 7 A 320 VAL VAL ALA VAL HIS HIS ALA LEU LEU THR SER GLY LEU SEQRES 8 A 320 PRO VAL SER GLU VAL ASP ILE VAL CYS THR LEU PRO LEU SEQRES 9 A 320 THR GLU TYR TYR ASP ARG ASN ASN GLN PRO ASN THR GLU SEQRES 10 A 320 ASN ILE GLU ARG LYS LYS ALA ASN PHE ARG LYS LYS ILE SEQRES 11 A 320 THR LEU ASN GLY GLY ASP THR PHE THR ILE LYS ASP VAL SEQRES 12 A 320 LYS VAL MET PRO GLU SER ILE PRO ALA GLY TYR GLU VAL SEQRES 13 A 320 LEU GLN GLU LEU ASP GLU LEU ASP SER LEU LEU ILE ILE SEQRES 14 A 320 ASP LEU GLY GLY THR THR LEU ASP ILE SER GLN VAL MET SEQRES 15 A 320 GLY LYS LEU SER GLY ILE SER LYS ILE TYR GLY ASP SER SEQRES 16 A 320 SER LEU GLY VAL SER LEU VAL THR SER ALA VAL LYS ASP SEQRES 17 A 320 ALA LEU SER LEU ALA ARG THR LYS GLY SER SER TYR LEU SEQRES 18 A 320 ALA ASP ASP ILE ILE ILE HIS ARG LYS ASP ASN ASN TYR SEQRES 19 A 320 LEU LYS GLN ARG ILE ASN ASP GLU ASN LYS ILE SER ILE SEQRES 20 A 320 VAL THR GLU ALA MET ASN GLU ALA LEU ARG LYS LEU GLU SEQRES 21 A 320 GLN ARG VAL LEU ASN THR LEU ASN GLU PHE SER GLY TYR SEQRES 22 A 320 THR HIS VAL MET VAL ILE GLY GLY GLY ALA GLU LEU ILE SEQRES 23 A 320 CYS ASP ALA VAL LYS LYS HIS THR GLN ILE ARG ASP GLU SEQRES 24 A 320 ARG PHE PHE LYS THR ASN ASN SER GLN TYR ASP LEU VAL SEQRES 25 A 320 ASN GLY MET TYR LEU ILE GLY ASN HELIX 1 1 ASN A 69 TYR A 74 5 6 HELIX 2 2 SER A 75 GLY A 90 1 16 HELIX 3 3 PRO A 103 TYR A 108 1 6 HELIX 4 4 ASN A 115 PHE A 126 1 12 HELIX 5 5 SER A 149 ALA A 152 5 4 HELIX 6 6 GLY A 153 GLU A 159 1 7 HELIX 7 7 LYS A 184 SER A 186 5 3 HELIX 8 8 VAL A 199 SER A 211 1 13 HELIX 9 9 THR A 215 HIS A 228 1 14 HELIX 10 10 ASP A 231 ILE A 239 1 9 HELIX 11 11 ASP A 241 ASN A 268 1 28 HELIX 12 12 GLY A 282 GLN A 295 1 14 HELIX 13 13 ARG A 297 GLU A 299 5 3 HELIX 14 14 TYR A 309 ASN A 320 1 12 SHEET 1 A 5 ILE A 23 SER A 28 0 SHEET 2 A 5 ILE A 12 GLN A 17 -1 N ILE A 12 O SER A 28 SHEET 3 A 5 LEU A 2 ASP A 7 -1 N ASP A 6 O LYS A 13 SHEET 4 A 5 GLU A 95 LEU A 102 1 O VAL A 99 N ILE A 5 SHEET 5 A 5 THR A 139 PRO A 147 1 O ASP A 142 N ILE A 98 SHEET 1 B 4 PHE A 32 LYS A 33 0 SHEET 2 B 4 GLN A 54 PHE A 57 -1 O SER A 56 N LYS A 33 SHEET 3 B 4 ASN A 47 THR A 49 -1 N TYR A 48 O TYR A 55 SHEET 4 B 4 THR A 131 LEU A 132 -1 O THR A 131 N THR A 49 SHEET 1 C 5 ILE A 188 ASP A 194 0 SHEET 2 C 5 LEU A 176 MET A 182 -1 N ILE A 178 O TYR A 192 SHEET 3 C 5 SER A 165 LEU A 171 -1 N LEU A 166 O VAL A 181 SHEET 4 C 5 HIS A 275 ILE A 279 1 O MET A 277 N ILE A 169 SHEET 5 C 5 PHE A 301 PHE A 302 1 O PHE A 302 N VAL A 278 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000