data_2QV3 # _entry.id 2QV3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2QV3 RCSB RCSB044092 WWPDB D_1000044092 # _pdbx_database_status.entry_id 2QV3 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-08-07 _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Gangwer, K.A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of the Helicobacter pylori vacuolating toxin p55 domain' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 104 _citation.page_first 16293 _citation.page_last 16298 _citation.year 2007 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17911250 _citation.pdbx_database_id_DOI 10.1073/pnas.0707447104 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Gangwer, K.A.' 1 primary 'Mushrush, D.J.' 2 primary 'Stauff, D.L.' 3 primary 'Spiller, B.' 4 primary 'McClain, M.S.' 5 primary 'Cover, T.L.' 6 primary 'Lacy, D.B.' 7 # _cell.length_a 56.606 _cell.length_b 56.606 _cell.length_c 256.895 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 2QV3 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 2QV3 _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vacuolating cytotoxin' 49391.023 1 ? ? p55 ? 2 water nat water 18.015 206 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name VacA # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TVVNIDRINTKADGTIKVGGFKASLTTNAAHLNIGKGGVNLSNQASGRTLLVENLTGNITVDGPLRVNNQVGGYALAGSS ANFEFKAGVDTKNGTATFNNDISLGRFVNLKVDAHTANFKGIDTGNGGFNTLDFSGVTNKVNINKLITASTNVAVKNFNI NELIVKTNGVSVGEYTHFSEDIGSQSRINTVRLETGTRSIFSGGVKFKSGEKLVIDEFYYSPWNYFDARNIKNVEITRKF ASSTPENPWGTSKLMFNNLTLGQNAVMDYSQFSNLTIQGDFINNQGTINYLVRGGKVATLNVGNAAAMMFNNDIDSATGF YKPLIKINSAQDLIKNTEHVLLKAKIIGYGNVSTGTNGISNVNLEEQFKERLALYNNNNRMDTCVVRNTDDIKACGMAIG NQSMVNNPDNYKYLIGKAWKNIGISKTANGSKISVYYLGNSTPTENGGNTTNLPTNT ; _entity_poly.pdbx_seq_one_letter_code_can ;TVVNIDRINTKADGTIKVGGFKASLTTNAAHLNIGKGGVNLSNQASGRTLLVENLTGNITVDGPLRVNNQVGGYALAGSS ANFEFKAGVDTKNGTATFNNDISLGRFVNLKVDAHTANFKGIDTGNGGFNTLDFSGVTNKVNINKLITASTNVAVKNFNI NELIVKTNGVSVGEYTHFSEDIGSQSRINTVRLETGTRSIFSGGVKFKSGEKLVIDEFYYSPWNYFDARNIKNVEITRKF ASSTPENPWGTSKLMFNNLTLGQNAVMDYSQFSNLTIQGDFINNQGTINYLVRGGKVATLNVGNAAAMMFNNDIDSATGF YKPLIKINSAQDLIKNTEHVLLKAKIIGYGNVSTGTNGISNVNLEEQFKERLALYNNNNRMDTCVVRNTDDIKACGMAIG NQSMVNNPDNYKYLIGKAWKNIGISKTANGSKISVYYLGNSTPTENGGNTTNLPTNT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 VAL n 1 3 VAL n 1 4 ASN n 1 5 ILE n 1 6 ASP n 1 7 ARG n 1 8 ILE n 1 9 ASN n 1 10 THR n 1 11 LYS n 1 12 ALA n 1 13 ASP n 1 14 GLY n 1 15 THR n 1 16 ILE n 1 17 LYS n 1 18 VAL n 1 19 GLY n 1 20 GLY n 1 21 PHE n 1 22 LYS n 1 23 ALA n 1 24 SER n 1 25 LEU n 1 26 THR n 1 27 THR n 1 28 ASN n 1 29 ALA n 1 30 ALA n 1 31 HIS n 1 32 LEU n 1 33 ASN n 1 34 ILE n 1 35 GLY n 1 36 LYS n 1 37 GLY n 1 38 GLY n 1 39 VAL n 1 40 ASN n 1 41 LEU n 1 42 SER n 1 43 ASN n 1 44 GLN n 1 45 ALA n 1 46 SER n 1 47 GLY n 1 48 ARG n 1 49 THR n 1 50 LEU n 1 51 LEU n 1 52 VAL n 1 53 GLU n 1 54 ASN n 1 55 LEU n 1 56 THR n 1 57 GLY n 1 58 ASN n 1 59 ILE n 1 60 THR n 1 61 VAL n 1 62 ASP n 1 63 GLY n 1 64 PRO n 1 65 LEU n 1 66 ARG n 1 67 VAL n 1 68 ASN n 1 69 ASN n 1 70 GLN n 1 71 VAL n 1 72 GLY n 1 73 GLY n 1 74 TYR n 1 75 ALA n 1 76 LEU n 1 77 ALA n 1 78 GLY n 1 79 SER n 1 80 SER n 1 81 ALA n 1 82 ASN n 1 83 PHE n 1 84 GLU n 1 85 PHE n 1 86 LYS n 1 87 ALA n 1 88 GLY n 1 89 VAL n 1 90 ASP n 1 91 THR n 1 92 LYS n 1 93 ASN n 1 94 GLY n 1 95 THR n 1 96 ALA n 1 97 THR n 1 98 PHE n 1 99 ASN n 1 100 ASN n 1 101 ASP n 1 102 ILE n 1 103 SER n 1 104 LEU n 1 105 GLY n 1 106 ARG n 1 107 PHE n 1 108 VAL n 1 109 ASN n 1 110 LEU n 1 111 LYS n 1 112 VAL n 1 113 ASP n 1 114 ALA n 1 115 HIS n 1 116 THR n 1 117 ALA n 1 118 ASN n 1 119 PHE n 1 120 LYS n 1 121 GLY n 1 122 ILE n 1 123 ASP n 1 124 THR n 1 125 GLY n 1 126 ASN n 1 127 GLY n 1 128 GLY n 1 129 PHE n 1 130 ASN n 1 131 THR n 1 132 LEU n 1 133 ASP n 1 134 PHE n 1 135 SER n 1 136 GLY n 1 137 VAL n 1 138 THR n 1 139 ASN n 1 140 LYS n 1 141 VAL n 1 142 ASN n 1 143 ILE n 1 144 ASN n 1 145 LYS n 1 146 LEU n 1 147 ILE n 1 148 THR n 1 149 ALA n 1 150 SER n 1 151 THR n 1 152 ASN n 1 153 VAL n 1 154 ALA n 1 155 VAL n 1 156 LYS n 1 157 ASN n 1 158 PHE n 1 159 ASN n 1 160 ILE n 1 161 ASN n 1 162 GLU n 1 163 LEU n 1 164 ILE n 1 165 VAL n 1 166 LYS n 1 167 THR n 1 168 ASN n 1 169 GLY n 1 170 VAL n 1 171 SER n 1 172 VAL n 1 173 GLY n 1 174 GLU n 1 175 TYR n 1 176 THR n 1 177 HIS n 1 178 PHE n 1 179 SER n 1 180 GLU n 1 181 ASP n 1 182 ILE n 1 183 GLY n 1 184 SER n 1 185 GLN n 1 186 SER n 1 187 ARG n 1 188 ILE n 1 189 ASN n 1 190 THR n 1 191 VAL n 1 192 ARG n 1 193 LEU n 1 194 GLU n 1 195 THR n 1 196 GLY n 1 197 THR n 1 198 ARG n 1 199 SER n 1 200 ILE n 1 201 PHE n 1 202 SER n 1 203 GLY n 1 204 GLY n 1 205 VAL n 1 206 LYS n 1 207 PHE n 1 208 LYS n 1 209 SER n 1 210 GLY n 1 211 GLU n 1 212 LYS n 1 213 LEU n 1 214 VAL n 1 215 ILE n 1 216 ASP n 1 217 GLU n 1 218 PHE n 1 219 TYR n 1 220 TYR n 1 221 SER n 1 222 PRO n 1 223 TRP n 1 224 ASN n 1 225 TYR n 1 226 PHE n 1 227 ASP n 1 228 ALA n 1 229 ARG n 1 230 ASN n 1 231 ILE n 1 232 LYS n 1 233 ASN n 1 234 VAL n 1 235 GLU n 1 236 ILE n 1 237 THR n 1 238 ARG n 1 239 LYS n 1 240 PHE n 1 241 ALA n 1 242 SER n 1 243 SER n 1 244 THR n 1 245 PRO n 1 246 GLU n 1 247 ASN n 1 248 PRO n 1 249 TRP n 1 250 GLY n 1 251 THR n 1 252 SER n 1 253 LYS n 1 254 LEU n 1 255 MET n 1 256 PHE n 1 257 ASN n 1 258 ASN n 1 259 LEU n 1 260 THR n 1 261 LEU n 1 262 GLY n 1 263 GLN n 1 264 ASN n 1 265 ALA n 1 266 VAL n 1 267 MET n 1 268 ASP n 1 269 TYR n 1 270 SER n 1 271 GLN n 1 272 PHE n 1 273 SER n 1 274 ASN n 1 275 LEU n 1 276 THR n 1 277 ILE n 1 278 GLN n 1 279 GLY n 1 280 ASP n 1 281 PHE n 1 282 ILE n 1 283 ASN n 1 284 ASN n 1 285 GLN n 1 286 GLY n 1 287 THR n 1 288 ILE n 1 289 ASN n 1 290 TYR n 1 291 LEU n 1 292 VAL n 1 293 ARG n 1 294 GLY n 1 295 GLY n 1 296 LYS n 1 297 VAL n 1 298 ALA n 1 299 THR n 1 300 LEU n 1 301 ASN n 1 302 VAL n 1 303 GLY n 1 304 ASN n 1 305 ALA n 1 306 ALA n 1 307 ALA n 1 308 MET n 1 309 MET n 1 310 PHE n 1 311 ASN n 1 312 ASN n 1 313 ASP n 1 314 ILE n 1 315 ASP n 1 316 SER n 1 317 ALA n 1 318 THR n 1 319 GLY n 1 320 PHE n 1 321 TYR n 1 322 LYS n 1 323 PRO n 1 324 LEU n 1 325 ILE n 1 326 LYS n 1 327 ILE n 1 328 ASN n 1 329 SER n 1 330 ALA n 1 331 GLN n 1 332 ASP n 1 333 LEU n 1 334 ILE n 1 335 LYS n 1 336 ASN n 1 337 THR n 1 338 GLU n 1 339 HIS n 1 340 VAL n 1 341 LEU n 1 342 LEU n 1 343 LYS n 1 344 ALA n 1 345 LYS n 1 346 ILE n 1 347 ILE n 1 348 GLY n 1 349 TYR n 1 350 GLY n 1 351 ASN n 1 352 VAL n 1 353 SER n 1 354 THR n 1 355 GLY n 1 356 THR n 1 357 ASN n 1 358 GLY n 1 359 ILE n 1 360 SER n 1 361 ASN n 1 362 VAL n 1 363 ASN n 1 364 LEU n 1 365 GLU n 1 366 GLU n 1 367 GLN n 1 368 PHE n 1 369 LYS n 1 370 GLU n 1 371 ARG n 1 372 LEU n 1 373 ALA n 1 374 LEU n 1 375 TYR n 1 376 ASN n 1 377 ASN n 1 378 ASN n 1 379 ASN n 1 380 ARG n 1 381 MET n 1 382 ASP n 1 383 THR n 1 384 CYS n 1 385 VAL n 1 386 VAL n 1 387 ARG n 1 388 ASN n 1 389 THR n 1 390 ASP n 1 391 ASP n 1 392 ILE n 1 393 LYS n 1 394 ALA n 1 395 CYS n 1 396 GLY n 1 397 MET n 1 398 ALA n 1 399 ILE n 1 400 GLY n 1 401 ASN n 1 402 GLN n 1 403 SER n 1 404 MET n 1 405 VAL n 1 406 ASN n 1 407 ASN n 1 408 PRO n 1 409 ASP n 1 410 ASN n 1 411 TYR n 1 412 LYS n 1 413 TYR n 1 414 LEU n 1 415 ILE n 1 416 GLY n 1 417 LYS n 1 418 ALA n 1 419 TRP n 1 420 LYS n 1 421 ASN n 1 422 ILE n 1 423 GLY n 1 424 ILE n 1 425 SER n 1 426 LYS n 1 427 THR n 1 428 ALA n 1 429 ASN n 1 430 GLY n 1 431 SER n 1 432 LYS n 1 433 ILE n 1 434 SER n 1 435 VAL n 1 436 TYR n 1 437 TYR n 1 438 LEU n 1 439 GLY n 1 440 ASN n 1 441 SER n 1 442 THR n 1 443 PRO n 1 444 THR n 1 445 GLU n 1 446 ASN n 1 447 GLY n 1 448 GLY n 1 449 ASN n 1 450 THR n 1 451 THR n 1 452 ASN n 1 453 LEU n 1 454 PRO n 1 455 THR n 1 456 ASN n 1 457 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Helicobacter _entity_src_gen.pdbx_gene_src_gene vacA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 60190 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Helicobacter pylori' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 210 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET41 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code VACA2_HELPY _struct_ref.pdbx_db_accession Q48245 _struct_ref.pdbx_align_begin 388 _struct_ref.pdbx_seq_one_letter_code ;TVVNIDRINTKADGTIKVGGFKASLTTNAAHLNIGKGGVNLSNQASGRTLLVENLTGNITVDGPLRVNNQVGGYALAGSS ANFEFKAGVDTKNGTATFNNDISLGRFVNLKVDAHTANFKGIDTGNGGFNTLDFSGVTNKVNINKLITASTNVAVKNFNI NELIVKTNGVSVGEYTHFSEDIGSQSRINTVRLETGTRSIFSGGVKFKSGEKLVIDEFYYSPWNYFDARNIKNVEITRKF ASSTPENPWGTSKLMFNNLTLGQNAVMDYSQFSNLTIQGDFINNQGTINYLVRGGKVATLNVGNAAAMMFNNDIDSATGF YKPLIKINSAQDLIKNTEHVLLKAKIIGYGNVSTGTNGISNVNLEEQFKERLALYNNNNRMDTCVVRNTDDIKACGMAIG NQSMVNNPDNYKYLIGKAWKNIGISKTANGSKISVYYLGNSTPTENGGNTTNLPTNT ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2QV3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 457 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q48245 _struct_ref_seq.db_align_beg 388 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 844 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 355 _struct_ref_seq.pdbx_auth_seq_align_end 811 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2QV3 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_percent_sol 48.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 294 _exptl_crystal_grow.pdbx_details '18-23% PEG 1500, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 2007-07-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double Crystal Si-220' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 2QV3 _reflns.d_resolution_high 2.400 _reflns.d_resolution_low 50.000 _reflns.number_obs 19101 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_netI_over_sigmaI 14.700 _reflns.pdbx_chi_squared 1.947 _reflns.pdbx_redundancy 7.400 _reflns.percent_possible_obs 96.700 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 1 _reflns.number_all 19753 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.49 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.410 _reflns_shell.meanI_over_sigI_obs 4.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.819 _reflns_shell.pdbx_redundancy 7.60 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1857 _reflns_shell.percent_possible_all 96.70 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2QV3 _refine.ls_d_res_high 2.401 _refine.ls_d_res_low 49.030 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 96.790 _refine.ls_number_reflns_obs 19041 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.183 _refine.ls_R_factor_R_work 0.181 _refine.ls_R_factor_R_free 0.222 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 972 _refine.B_iso_mean 50.770 _refine.aniso_B[1][1] -0.190 _refine.aniso_B[2][2] -0.190 _refine.aniso_B[3][3] 0.280 _refine.aniso_B[1][2] -0.090 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.pdbx_overall_ESU_R 0.445 _refine.pdbx_overall_ESU_R_Free 0.245 _refine.overall_SU_ML 0.163 _refine.overall_SU_B 13.443 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 19041 _refine.ls_R_factor_all 0.183 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3403 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 206 _refine_hist.number_atoms_total 3609 _refine_hist.d_res_high 2.401 _refine_hist.d_res_low 49.030 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 3454 0.023 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 4679 2.171 1.932 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 445 8.396 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 162 40.555 25.864 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 581 19.191 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13 14.638 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 539 0.168 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2615 0.009 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 1398 0.226 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 2255 0.317 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 246 0.176 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 42 0.239 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 7 0.285 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2263 1.182 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3538 1.927 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1354 3.188 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1141 4.919 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.401 _refine_ls_shell.d_res_low 2.463 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.620 _refine_ls_shell.number_reflns_R_work 1319 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.193 _refine_ls_shell.R_factor_R_free 0.257 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1399 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2QV3 _struct.title 'Crystal Structure of the Helicobacter pylori Vacuolating Toxin p55 Domain' _struct.pdbx_descriptor 'Vacuolating cytotoxin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2QV3 _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'beta-helix, VacA, Toxin' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 329 ? LEU A 333 ? SER A 683 LEU A 687 5 ? 5 HELX_P HELX_P2 2 ASN A 363 ? GLU A 370 ? ASN A 717 GLU A 724 1 ? 8 HELX_P HELX_P3 3 ASN A 388 ? GLY A 400 ? ASN A 742 GLY A 754 1 ? 13 HELX_P HELX_P4 4 ASN A 401 ? ASN A 407 ? ASN A 755 ASN A 761 1 ? 7 HELX_P HELX_P5 5 PRO A 408 ? ILE A 415 ? PRO A 762 ILE A 769 5 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 384 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 395 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 738 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 749 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.115 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 15 ? B ? 12 ? C ? 3 ? D ? 5 ? E ? 5 ? F ? 7 ? G ? 4 ? H ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel A 9 10 ? parallel A 10 11 ? parallel A 11 12 ? parallel A 12 13 ? parallel A 13 14 ? parallel A 14 15 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? parallel B 8 9 ? parallel B 9 10 ? parallel B 10 11 ? parallel B 11 12 ? parallel C 1 2 ? parallel C 2 3 ? parallel D 1 2 ? parallel D 2 3 ? parallel D 3 4 ? parallel D 4 5 ? parallel E 1 2 ? parallel E 2 3 ? parallel E 3 4 ? parallel E 4 5 ? parallel F 1 2 ? parallel F 2 3 ? parallel F 3 4 ? parallel F 4 5 ? parallel F 5 6 ? parallel F 6 7 ? parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 3 ? ASN A 9 ? VAL A 357 ASN A 363 A 2 HIS A 31 ? LEU A 41 ? HIS A 385 LEU A 395 A 3 ASN A 58 ? VAL A 61 ? ASN A 412 VAL A 415 A 4 THR A 95 ? PHE A 98 ? THR A 449 PHE A 452 A 5 VAL A 108 ? ASP A 123 ? VAL A 462 ASP A 477 A 6 ASN A 130 ? THR A 148 ? ASN A 484 THR A 502 A 7 PHE A 158 ? VAL A 165 ? PHE A 512 VAL A 519 A 8 SER A 186 ? LEU A 193 ? SER A 540 LEU A 547 A 9 VAL A 205 ? TYR A 220 ? VAL A 559 TYR A 574 A 10 TYR A 225 ? SER A 242 ? TYR A 579 SER A 596 A 11 VAL A 266 ? TYR A 269 ? VAL A 620 TYR A 623 A 12 THR A 287 ? LEU A 291 ? THR A 641 LEU A 645 A 13 ILE A 325 ? ASN A 328 ? ILE A 679 ASN A 682 A 14 LEU A 372 ? ASN A 376 ? LEU A 726 ASN A 730 A 15 ASN A 379 ? ARG A 380 ? ASN A 733 ARG A 734 B 1 VAL A 3 ? ASN A 9 ? VAL A 357 ASN A 363 B 2 HIS A 31 ? LEU A 41 ? HIS A 385 LEU A 395 B 3 ASN A 58 ? VAL A 61 ? ASN A 412 VAL A 415 B 4 THR A 95 ? PHE A 98 ? THR A 449 PHE A 452 B 5 VAL A 108 ? ASP A 123 ? VAL A 462 ASP A 477 B 6 ASN A 130 ? THR A 148 ? ASN A 484 THR A 502 B 7 PHE A 158 ? VAL A 165 ? PHE A 512 VAL A 519 B 8 SER A 186 ? LEU A 193 ? SER A 540 LEU A 547 B 9 VAL A 205 ? TYR A 220 ? VAL A 559 TYR A 574 B 10 TYR A 225 ? SER A 242 ? TYR A 579 SER A 596 B 11 SER A 252 ? LEU A 261 ? SER A 606 LEU A 615 B 12 SER A 273 ? ILE A 277 ? SER A 627 ILE A 631 C 1 VAL A 3 ? ASN A 9 ? VAL A 357 ASN A 363 C 2 HIS A 31 ? LEU A 41 ? HIS A 385 LEU A 395 C 3 LEU A 65 ? VAL A 67 ? LEU A 419 VAL A 421 D 1 SER A 24 ? THR A 27 ? SER A 378 THR A 381 D 2 LEU A 50 ? ASN A 54 ? LEU A 404 ASN A 408 D 3 ALA A 81 ? ALA A 87 ? ALA A 435 ALA A 441 D 4 VAL A 108 ? ASP A 123 ? VAL A 462 ASP A 477 D 5 ILE A 102 ? SER A 103 ? ILE A 456 SER A 457 E 1 SER A 273 ? ILE A 277 ? SER A 627 ILE A 631 E 2 SER A 252 ? LEU A 261 ? SER A 606 LEU A 615 E 3 PHE A 281 ? ASN A 284 ? PHE A 635 ASN A 638 E 4 ALA A 305 ? PHE A 310 ? ALA A 659 PHE A 664 E 5 ILE A 346 ? ASN A 351 ? ILE A 700 ASN A 705 F 1 THR A 176 ? ASP A 181 ? THR A 530 ASP A 535 F 2 THR A 151 ? ALA A 154 ? THR A 505 ALA A 508 F 3 ASN A 130 ? THR A 148 ? ASN A 484 THR A 502 F 4 PHE A 158 ? VAL A 165 ? PHE A 512 VAL A 519 F 5 SER A 186 ? LEU A 193 ? SER A 540 LEU A 547 F 6 VAL A 205 ? TYR A 220 ? VAL A 559 TYR A 574 F 7 THR A 176 ? ASP A 181 ? THR A 530 ASP A 535 G 1 LEU A 300 ? ASN A 301 ? LEU A 654 ASN A 655 G 2 GLU A 338 ? LYS A 343 ? GLU A 692 LYS A 697 G 3 LYS A 432 ? TYR A 437 ? LYS A 786 TYR A 791 G 4 ILE A 424 ? ALA A 428 ? ILE A 778 ALA A 782 H 1 THR A 383 ? VAL A 386 ? THR A 737 VAL A 740 H 2 LYS A 417 ? LYS A 420 ? LYS A 771 LYS A 774 H 3 THR A 450 ? ASN A 452 ? THR A 804 ASN A 806 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 3 ? N VAL A 357 O ASN A 33 ? O ASN A 387 A 2 3 N ILE A 34 ? N ILE A 388 O THR A 60 ? O THR A 414 A 3 4 N VAL A 61 ? N VAL A 415 O THR A 97 ? O THR A 451 A 4 5 N PHE A 98 ? N PHE A 452 O ASN A 118 ? O ASN A 472 A 5 6 N ILE A 122 ? N ILE A 476 O LYS A 145 ? O LYS A 499 A 6 7 N LEU A 146 ? N LEU A 500 O ILE A 164 ? O ILE A 518 A 7 8 N LEU A 163 ? N LEU A 517 O ARG A 192 ? O ARG A 546 A 8 9 N VAL A 191 ? N VAL A 545 O TYR A 219 ? O TYR A 573 A 9 10 N VAL A 205 ? N VAL A 559 O ASP A 227 ? O ASP A 581 A 10 11 N PHE A 240 ? N PHE A 594 O ASP A 268 ? O ASP A 622 A 11 12 N MET A 267 ? N MET A 621 O THR A 287 ? O THR A 641 A 12 13 N TYR A 290 ? N TYR A 644 O LYS A 326 ? O LYS A 680 A 13 14 N ILE A 325 ? N ILE A 679 O ALA A 373 ? O ALA A 727 A 14 15 N ASN A 376 ? N ASN A 730 O ASN A 379 ? O ASN A 733 B 1 2 N VAL A 3 ? N VAL A 357 O ASN A 33 ? O ASN A 387 B 2 3 N ILE A 34 ? N ILE A 388 O THR A 60 ? O THR A 414 B 3 4 N VAL A 61 ? N VAL A 415 O THR A 97 ? O THR A 451 B 4 5 N PHE A 98 ? N PHE A 452 O ASN A 118 ? O ASN A 472 B 5 6 N ILE A 122 ? N ILE A 476 O LYS A 145 ? O LYS A 499 B 6 7 N LEU A 146 ? N LEU A 500 O ILE A 164 ? O ILE A 518 B 7 8 N LEU A 163 ? N LEU A 517 O ARG A 192 ? O ARG A 546 B 8 9 N VAL A 191 ? N VAL A 545 O TYR A 219 ? O TYR A 573 B 9 10 N VAL A 205 ? N VAL A 559 O ASP A 227 ? O ASP A 581 B 10 11 N ALA A 228 ? N ALA A 582 O MET A 255 ? O MET A 609 B 11 12 N LEU A 254 ? N LEU A 608 O THR A 276 ? O THR A 630 C 1 2 N VAL A 3 ? N VAL A 357 O ASN A 33 ? O ASN A 387 C 2 3 N VAL A 39 ? N VAL A 393 O ARG A 66 ? O ARG A 420 D 1 2 N LEU A 25 ? N LEU A 379 O LEU A 51 ? O LEU A 405 D 2 3 N VAL A 52 ? N VAL A 406 O GLU A 84 ? O GLU A 438 D 3 4 N ALA A 87 ? N ALA A 441 O ASP A 113 ? O ASP A 467 D 4 5 O ASP A 123 ? O ASP A 477 N ILE A 102 ? N ILE A 456 E 1 2 O THR A 276 ? O THR A 630 N LEU A 254 ? N LEU A 608 E 2 3 N LEU A 261 ? N LEU A 615 O ILE A 282 ? O ILE A 636 E 3 4 N ASN A 283 ? N ASN A 637 O ALA A 307 ? O ALA A 661 E 4 5 N MET A 308 ? N MET A 662 O GLY A 348 ? O GLY A 702 F 1 2 O HIS A 177 ? O HIS A 531 N THR A 151 ? N THR A 505 F 2 3 O ASN A 152 ? O ASN A 506 N LEU A 132 ? N LEU A 486 F 3 4 N LEU A 146 ? N LEU A 500 O ILE A 164 ? O ILE A 518 F 4 5 N LEU A 163 ? N LEU A 517 O ARG A 192 ? O ARG A 546 F 5 6 N VAL A 191 ? N VAL A 545 O TYR A 219 ? O TYR A 573 F 6 7 O LYS A 208 ? O LYS A 562 N PHE A 178 ? N PHE A 532 G 1 2 N LEU A 300 ? N LEU A 654 O LEU A 341 ? O LEU A 695 G 2 3 N HIS A 339 ? N HIS A 693 O VAL A 435 ? O VAL A 789 G 3 4 O TYR A 436 ? O TYR A 790 N SER A 425 ? N SER A 779 H 1 2 N CYS A 384 ? N CYS A 738 O TRP A 419 ? O TRP A 773 H 2 3 N ALA A 418 ? N ALA A 772 O THR A 451 ? O THR A 805 # _atom_sites.entry_id 2QV3 _atom_sites.fract_transf_matrix[1][1] 0.017666 _atom_sites.fract_transf_matrix[1][2] 0.010199 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020399 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003893 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 355 355 THR THR A . n A 1 2 VAL 2 356 356 VAL VAL A . n A 1 3 VAL 3 357 357 VAL VAL A . n A 1 4 ASN 4 358 358 ASN ASN A . n A 1 5 ILE 5 359 359 ILE ILE A . n A 1 6 ASP 6 360 360 ASP ASP A . n A 1 7 ARG 7 361 361 ARG ARG A . n A 1 8 ILE 8 362 362 ILE ILE A . n A 1 9 ASN 9 363 363 ASN ASN A . n A 1 10 THR 10 364 364 THR THR A . n A 1 11 LYS 11 365 365 LYS LYS A . n A 1 12 ALA 12 366 366 ALA ALA A . n A 1 13 ASP 13 367 ? ? ? A . n A 1 14 GLY 14 368 ? ? ? A . n A 1 15 THR 15 369 ? ? ? A . n A 1 16 ILE 16 370 ? ? ? A . n A 1 17 LYS 17 371 ? ? ? A . n A 1 18 VAL 18 372 ? ? ? A . n A 1 19 GLY 19 373 ? ? ? A . n A 1 20 GLY 20 374 ? ? ? A . n A 1 21 PHE 21 375 ? ? ? A . n A 1 22 LYS 22 376 ? ? ? A . n A 1 23 ALA 23 377 377 ALA ALA A . n A 1 24 SER 24 378 378 SER SER A . n A 1 25 LEU 25 379 379 LEU LEU A . n A 1 26 THR 26 380 380 THR THR A . n A 1 27 THR 27 381 381 THR THR A . n A 1 28 ASN 28 382 382 ASN ASN A . n A 1 29 ALA 29 383 383 ALA ALA A . n A 1 30 ALA 30 384 384 ALA ALA A . n A 1 31 HIS 31 385 385 HIS HIS A . n A 1 32 LEU 32 386 386 LEU LEU A . n A 1 33 ASN 33 387 387 ASN ASN A . n A 1 34 ILE 34 388 388 ILE ILE A . n A 1 35 GLY 35 389 389 GLY GLY A . n A 1 36 LYS 36 390 390 LYS LYS A . n A 1 37 GLY 37 391 391 GLY GLY A . n A 1 38 GLY 38 392 392 GLY GLY A . n A 1 39 VAL 39 393 393 VAL VAL A . n A 1 40 ASN 40 394 394 ASN ASN A . n A 1 41 LEU 41 395 395 LEU LEU A . n A 1 42 SER 42 396 396 SER SER A . n A 1 43 ASN 43 397 397 ASN ASN A . n A 1 44 GLN 44 398 398 GLN GLN A . n A 1 45 ALA 45 399 399 ALA ALA A . n A 1 46 SER 46 400 400 SER SER A . n A 1 47 GLY 47 401 401 GLY GLY A . n A 1 48 ARG 48 402 402 ARG ARG A . n A 1 49 THR 49 403 403 THR THR A . n A 1 50 LEU 50 404 404 LEU LEU A . n A 1 51 LEU 51 405 405 LEU LEU A . n A 1 52 VAL 52 406 406 VAL VAL A . n A 1 53 GLU 53 407 407 GLU GLU A . n A 1 54 ASN 54 408 408 ASN ASN A . n A 1 55 LEU 55 409 409 LEU LEU A . n A 1 56 THR 56 410 410 THR THR A . n A 1 57 GLY 57 411 411 GLY GLY A . n A 1 58 ASN 58 412 412 ASN ASN A . n A 1 59 ILE 59 413 413 ILE ILE A . n A 1 60 THR 60 414 414 THR THR A . n A 1 61 VAL 61 415 415 VAL VAL A . n A 1 62 ASP 62 416 416 ASP ASP A . n A 1 63 GLY 63 417 417 GLY GLY A . n A 1 64 PRO 64 418 418 PRO PRO A . n A 1 65 LEU 65 419 419 LEU LEU A . n A 1 66 ARG 66 420 420 ARG ARG A . n A 1 67 VAL 67 421 421 VAL VAL A . n A 1 68 ASN 68 422 422 ASN ASN A . n A 1 69 ASN 69 423 423 ASN ASN A . n A 1 70 GLN 70 424 424 GLN GLN A . n A 1 71 VAL 71 425 425 VAL VAL A . n A 1 72 GLY 72 426 426 GLY GLY A . n A 1 73 GLY 73 427 427 GLY GLY A . n A 1 74 TYR 74 428 428 TYR TYR A . n A 1 75 ALA 75 429 429 ALA ALA A . n A 1 76 LEU 76 430 430 LEU LEU A . n A 1 77 ALA 77 431 431 ALA ALA A . n A 1 78 GLY 78 432 432 GLY GLY A . n A 1 79 SER 79 433 433 SER SER A . n A 1 80 SER 80 434 434 SER SER A . n A 1 81 ALA 81 435 435 ALA ALA A . n A 1 82 ASN 82 436 436 ASN ASN A . n A 1 83 PHE 83 437 437 PHE PHE A . n A 1 84 GLU 84 438 438 GLU GLU A . n A 1 85 PHE 85 439 439 PHE PHE A . n A 1 86 LYS 86 440 440 LYS LYS A . n A 1 87 ALA 87 441 441 ALA ALA A . n A 1 88 GLY 88 442 442 GLY GLY A . n A 1 89 VAL 89 443 443 VAL VAL A . n A 1 90 ASP 90 444 444 ASP ASP A . n A 1 91 THR 91 445 445 THR THR A . n A 1 92 LYS 92 446 446 LYS LYS A . n A 1 93 ASN 93 447 447 ASN ASN A . n A 1 94 GLY 94 448 448 GLY GLY A . n A 1 95 THR 95 449 449 THR THR A . n A 1 96 ALA 96 450 450 ALA ALA A . n A 1 97 THR 97 451 451 THR THR A . n A 1 98 PHE 98 452 452 PHE PHE A . n A 1 99 ASN 99 453 453 ASN ASN A . n A 1 100 ASN 100 454 454 ASN ASN A . n A 1 101 ASP 101 455 455 ASP ASP A . n A 1 102 ILE 102 456 456 ILE ILE A . n A 1 103 SER 103 457 457 SER SER A . n A 1 104 LEU 104 458 458 LEU LEU A . n A 1 105 GLY 105 459 459 GLY GLY A . n A 1 106 ARG 106 460 460 ARG ARG A . n A 1 107 PHE 107 461 461 PHE PHE A . n A 1 108 VAL 108 462 462 VAL VAL A . n A 1 109 ASN 109 463 463 ASN ASN A . n A 1 110 LEU 110 464 464 LEU LEU A . n A 1 111 LYS 111 465 465 LYS LYS A . n A 1 112 VAL 112 466 466 VAL VAL A . n A 1 113 ASP 113 467 467 ASP ASP A . n A 1 114 ALA 114 468 468 ALA ALA A . n A 1 115 HIS 115 469 469 HIS HIS A . n A 1 116 THR 116 470 470 THR THR A . n A 1 117 ALA 117 471 471 ALA ALA A . n A 1 118 ASN 118 472 472 ASN ASN A . n A 1 119 PHE 119 473 473 PHE PHE A . n A 1 120 LYS 120 474 474 LYS LYS A . n A 1 121 GLY 121 475 475 GLY GLY A . n A 1 122 ILE 122 476 476 ILE ILE A . n A 1 123 ASP 123 477 477 ASP ASP A . n A 1 124 THR 124 478 478 THR THR A . n A 1 125 GLY 125 479 479 GLY GLY A . n A 1 126 ASN 126 480 480 ASN ASN A . n A 1 127 GLY 127 481 481 GLY GLY A . n A 1 128 GLY 128 482 482 GLY GLY A . n A 1 129 PHE 129 483 483 PHE PHE A . n A 1 130 ASN 130 484 484 ASN ASN A . n A 1 131 THR 131 485 485 THR THR A . n A 1 132 LEU 132 486 486 LEU LEU A . n A 1 133 ASP 133 487 487 ASP ASP A . n A 1 134 PHE 134 488 488 PHE PHE A . n A 1 135 SER 135 489 489 SER SER A . n A 1 136 GLY 136 490 490 GLY GLY A . n A 1 137 VAL 137 491 491 VAL VAL A . n A 1 138 THR 138 492 492 THR THR A . n A 1 139 ASN 139 493 493 ASN ASN A . n A 1 140 LYS 140 494 494 LYS LYS A . n A 1 141 VAL 141 495 495 VAL VAL A . n A 1 142 ASN 142 496 496 ASN ASN A . n A 1 143 ILE 143 497 497 ILE ILE A . n A 1 144 ASN 144 498 498 ASN ASN A . n A 1 145 LYS 145 499 499 LYS LYS A . n A 1 146 LEU 146 500 500 LEU LEU A . n A 1 147 ILE 147 501 501 ILE ILE A . n A 1 148 THR 148 502 502 THR THR A . n A 1 149 ALA 149 503 503 ALA ALA A . n A 1 150 SER 150 504 504 SER SER A . n A 1 151 THR 151 505 505 THR THR A . n A 1 152 ASN 152 506 506 ASN ASN A . n A 1 153 VAL 153 507 507 VAL VAL A . n A 1 154 ALA 154 508 508 ALA ALA A . n A 1 155 VAL 155 509 509 VAL VAL A . n A 1 156 LYS 156 510 510 LYS LYS A . n A 1 157 ASN 157 511 511 ASN ASN A . n A 1 158 PHE 158 512 512 PHE PHE A . n A 1 159 ASN 159 513 513 ASN ASN A . n A 1 160 ILE 160 514 514 ILE ILE A . n A 1 161 ASN 161 515 515 ASN ASN A . n A 1 162 GLU 162 516 516 GLU GLU A . n A 1 163 LEU 163 517 517 LEU LEU A . n A 1 164 ILE 164 518 518 ILE ILE A . n A 1 165 VAL 165 519 519 VAL VAL A . n A 1 166 LYS 166 520 520 LYS LYS A . n A 1 167 THR 167 521 521 THR THR A . n A 1 168 ASN 168 522 522 ASN ASN A . n A 1 169 GLY 169 523 523 GLY GLY A . n A 1 170 VAL 170 524 524 VAL VAL A . n A 1 171 SER 171 525 525 SER SER A . n A 1 172 VAL 172 526 526 VAL VAL A . n A 1 173 GLY 173 527 527 GLY GLY A . n A 1 174 GLU 174 528 528 GLU GLU A . n A 1 175 TYR 175 529 529 TYR TYR A . n A 1 176 THR 176 530 530 THR THR A . n A 1 177 HIS 177 531 531 HIS HIS A . n A 1 178 PHE 178 532 532 PHE PHE A . n A 1 179 SER 179 533 533 SER SER A . n A 1 180 GLU 180 534 534 GLU GLU A . n A 1 181 ASP 181 535 535 ASP ASP A . n A 1 182 ILE 182 536 536 ILE ILE A . n A 1 183 GLY 183 537 537 GLY GLY A . n A 1 184 SER 184 538 538 SER SER A . n A 1 185 GLN 185 539 539 GLN GLN A . n A 1 186 SER 186 540 540 SER SER A . n A 1 187 ARG 187 541 541 ARG ARG A . n A 1 188 ILE 188 542 542 ILE ILE A . n A 1 189 ASN 189 543 543 ASN ASN A . n A 1 190 THR 190 544 544 THR THR A . n A 1 191 VAL 191 545 545 VAL VAL A . n A 1 192 ARG 192 546 546 ARG ARG A . n A 1 193 LEU 193 547 547 LEU LEU A . n A 1 194 GLU 194 548 548 GLU GLU A . n A 1 195 THR 195 549 549 THR THR A . n A 1 196 GLY 196 550 550 GLY GLY A . n A 1 197 THR 197 551 551 THR THR A . n A 1 198 ARG 198 552 552 ARG ARG A . n A 1 199 SER 199 553 553 SER SER A . n A 1 200 ILE 200 554 554 ILE ILE A . n A 1 201 PHE 201 555 555 PHE PHE A . n A 1 202 SER 202 556 556 SER SER A . n A 1 203 GLY 203 557 557 GLY GLY A . n A 1 204 GLY 204 558 558 GLY GLY A . n A 1 205 VAL 205 559 559 VAL VAL A . n A 1 206 LYS 206 560 560 LYS LYS A . n A 1 207 PHE 207 561 561 PHE PHE A . n A 1 208 LYS 208 562 562 LYS LYS A . n A 1 209 SER 209 563 563 SER SER A . n A 1 210 GLY 210 564 564 GLY GLY A . n A 1 211 GLU 211 565 565 GLU GLU A . n A 1 212 LYS 212 566 566 LYS LYS A . n A 1 213 LEU 213 567 567 LEU LEU A . n A 1 214 VAL 214 568 568 VAL VAL A . n A 1 215 ILE 215 569 569 ILE ILE A . n A 1 216 ASP 216 570 570 ASP ASP A . n A 1 217 GLU 217 571 571 GLU GLU A . n A 1 218 PHE 218 572 572 PHE PHE A . n A 1 219 TYR 219 573 573 TYR TYR A . n A 1 220 TYR 220 574 574 TYR TYR A . n A 1 221 SER 221 575 575 SER SER A . n A 1 222 PRO 222 576 576 PRO PRO A . n A 1 223 TRP 223 577 577 TRP TRP A . n A 1 224 ASN 224 578 578 ASN ASN A . n A 1 225 TYR 225 579 579 TYR TYR A . n A 1 226 PHE 226 580 580 PHE PHE A . n A 1 227 ASP 227 581 581 ASP ASP A . n A 1 228 ALA 228 582 582 ALA ALA A . n A 1 229 ARG 229 583 583 ARG ARG A . n A 1 230 ASN 230 584 584 ASN ASN A . n A 1 231 ILE 231 585 585 ILE ILE A . n A 1 232 LYS 232 586 586 LYS LYS A . n A 1 233 ASN 233 587 587 ASN ASN A . n A 1 234 VAL 234 588 588 VAL VAL A . n A 1 235 GLU 235 589 589 GLU GLU A . n A 1 236 ILE 236 590 590 ILE ILE A . n A 1 237 THR 237 591 591 THR THR A . n A 1 238 ARG 238 592 592 ARG ARG A . n A 1 239 LYS 239 593 593 LYS LYS A . n A 1 240 PHE 240 594 594 PHE PHE A . n A 1 241 ALA 241 595 595 ALA ALA A . n A 1 242 SER 242 596 596 SER SER A . n A 1 243 SER 243 597 597 SER SER A . n A 1 244 THR 244 598 598 THR THR A . n A 1 245 PRO 245 599 599 PRO PRO A . n A 1 246 GLU 246 600 600 GLU GLU A . n A 1 247 ASN 247 601 601 ASN ASN A . n A 1 248 PRO 248 602 602 PRO PRO A . n A 1 249 TRP 249 603 603 TRP TRP A . n A 1 250 GLY 250 604 604 GLY GLY A . n A 1 251 THR 251 605 605 THR THR A . n A 1 252 SER 252 606 606 SER SER A . n A 1 253 LYS 253 607 607 LYS LYS A . n A 1 254 LEU 254 608 608 LEU LEU A . n A 1 255 MET 255 609 609 MET MET A . n A 1 256 PHE 256 610 610 PHE PHE A . n A 1 257 ASN 257 611 611 ASN ASN A . n A 1 258 ASN 258 612 612 ASN ASN A . n A 1 259 LEU 259 613 613 LEU LEU A . n A 1 260 THR 260 614 614 THR THR A . n A 1 261 LEU 261 615 615 LEU LEU A . n A 1 262 GLY 262 616 616 GLY GLY A . n A 1 263 GLN 263 617 617 GLN GLN A . n A 1 264 ASN 264 618 618 ASN ASN A . n A 1 265 ALA 265 619 619 ALA ALA A . n A 1 266 VAL 266 620 620 VAL VAL A . n A 1 267 MET 267 621 621 MET MET A . n A 1 268 ASP 268 622 622 ASP ASP A . n A 1 269 TYR 269 623 623 TYR TYR A . n A 1 270 SER 270 624 624 SER SER A . n A 1 271 GLN 271 625 625 GLN GLN A . n A 1 272 PHE 272 626 626 PHE PHE A . n A 1 273 SER 273 627 627 SER SER A . n A 1 274 ASN 274 628 628 ASN ASN A . n A 1 275 LEU 275 629 629 LEU LEU A . n A 1 276 THR 276 630 630 THR THR A . n A 1 277 ILE 277 631 631 ILE ILE A . n A 1 278 GLN 278 632 632 GLN GLN A . n A 1 279 GLY 279 633 633 GLY GLY A . n A 1 280 ASP 280 634 634 ASP ASP A . n A 1 281 PHE 281 635 635 PHE PHE A . n A 1 282 ILE 282 636 636 ILE ILE A . n A 1 283 ASN 283 637 637 ASN ASN A . n A 1 284 ASN 284 638 638 ASN ASN A . n A 1 285 GLN 285 639 639 GLN GLN A . n A 1 286 GLY 286 640 640 GLY GLY A . n A 1 287 THR 287 641 641 THR THR A . n A 1 288 ILE 288 642 642 ILE ILE A . n A 1 289 ASN 289 643 643 ASN ASN A . n A 1 290 TYR 290 644 644 TYR TYR A . n A 1 291 LEU 291 645 645 LEU LEU A . n A 1 292 VAL 292 646 646 VAL VAL A . n A 1 293 ARG 293 647 647 ARG ARG A . n A 1 294 GLY 294 648 648 GLY GLY A . n A 1 295 GLY 295 649 649 GLY GLY A . n A 1 296 LYS 296 650 650 LYS LYS A . n A 1 297 VAL 297 651 651 VAL VAL A . n A 1 298 ALA 298 652 652 ALA ALA A . n A 1 299 THR 299 653 653 THR THR A . n A 1 300 LEU 300 654 654 LEU LEU A . n A 1 301 ASN 301 655 655 ASN ASN A . n A 1 302 VAL 302 656 656 VAL VAL A . n A 1 303 GLY 303 657 657 GLY GLY A . n A 1 304 ASN 304 658 658 ASN ASN A . n A 1 305 ALA 305 659 659 ALA ALA A . n A 1 306 ALA 306 660 660 ALA ALA A . n A 1 307 ALA 307 661 661 ALA ALA A . n A 1 308 MET 308 662 662 MET MET A . n A 1 309 MET 309 663 663 MET MET A . n A 1 310 PHE 310 664 664 PHE PHE A . n A 1 311 ASN 311 665 665 ASN ASN A . n A 1 312 ASN 312 666 666 ASN ASN A . n A 1 313 ASP 313 667 667 ASP ASP A . n A 1 314 ILE 314 668 668 ILE ILE A . n A 1 315 ASP 315 669 669 ASP ASP A . n A 1 316 SER 316 670 670 SER SER A . n A 1 317 ALA 317 671 671 ALA ALA A . n A 1 318 THR 318 672 672 THR THR A . n A 1 319 GLY 319 673 673 GLY GLY A . n A 1 320 PHE 320 674 674 PHE PHE A . n A 1 321 TYR 321 675 675 TYR TYR A . n A 1 322 LYS 322 676 676 LYS LYS A . n A 1 323 PRO 323 677 677 PRO PRO A . n A 1 324 LEU 324 678 678 LEU LEU A . n A 1 325 ILE 325 679 679 ILE ILE A . n A 1 326 LYS 326 680 680 LYS LYS A . n A 1 327 ILE 327 681 681 ILE ILE A . n A 1 328 ASN 328 682 682 ASN ASN A . n A 1 329 SER 329 683 683 SER SER A . n A 1 330 ALA 330 684 684 ALA ALA A . n A 1 331 GLN 331 685 685 GLN GLN A . n A 1 332 ASP 332 686 686 ASP ASP A . n A 1 333 LEU 333 687 687 LEU LEU A . n A 1 334 ILE 334 688 688 ILE ILE A . n A 1 335 LYS 335 689 689 LYS LYS A . n A 1 336 ASN 336 690 690 ASN ASN A . n A 1 337 THR 337 691 691 THR THR A . n A 1 338 GLU 338 692 692 GLU GLU A . n A 1 339 HIS 339 693 693 HIS HIS A . n A 1 340 VAL 340 694 694 VAL VAL A . n A 1 341 LEU 341 695 695 LEU LEU A . n A 1 342 LEU 342 696 696 LEU LEU A . n A 1 343 LYS 343 697 697 LYS LYS A . n A 1 344 ALA 344 698 698 ALA ALA A . n A 1 345 LYS 345 699 699 LYS LYS A . n A 1 346 ILE 346 700 700 ILE ILE A . n A 1 347 ILE 347 701 701 ILE ILE A . n A 1 348 GLY 348 702 702 GLY GLY A . n A 1 349 TYR 349 703 703 TYR TYR A . n A 1 350 GLY 350 704 704 GLY GLY A . n A 1 351 ASN 351 705 705 ASN ASN A . n A 1 352 VAL 352 706 706 VAL VAL A . n A 1 353 SER 353 707 707 SER SER A . n A 1 354 THR 354 708 708 THR THR A . n A 1 355 GLY 355 709 709 GLY GLY A . n A 1 356 THR 356 710 710 THR THR A . n A 1 357 ASN 357 711 711 ASN ASN A . n A 1 358 GLY 358 712 712 GLY GLY A . n A 1 359 ILE 359 713 713 ILE ILE A . n A 1 360 SER 360 714 714 SER SER A . n A 1 361 ASN 361 715 715 ASN ASN A . n A 1 362 VAL 362 716 716 VAL VAL A . n A 1 363 ASN 363 717 717 ASN ASN A . n A 1 364 LEU 364 718 718 LEU LEU A . n A 1 365 GLU 365 719 719 GLU GLU A . n A 1 366 GLU 366 720 720 GLU GLU A . n A 1 367 GLN 367 721 721 GLN GLN A . n A 1 368 PHE 368 722 722 PHE PHE A . n A 1 369 LYS 369 723 723 LYS LYS A . n A 1 370 GLU 370 724 724 GLU GLU A . n A 1 371 ARG 371 725 725 ARG ARG A . n A 1 372 LEU 372 726 726 LEU LEU A . n A 1 373 ALA 373 727 727 ALA ALA A . n A 1 374 LEU 374 728 728 LEU LEU A . n A 1 375 TYR 375 729 729 TYR TYR A . n A 1 376 ASN 376 730 730 ASN ASN A . n A 1 377 ASN 377 731 731 ASN ASN A . n A 1 378 ASN 378 732 732 ASN ASN A . n A 1 379 ASN 379 733 733 ASN ASN A . n A 1 380 ARG 380 734 734 ARG ARG A . n A 1 381 MET 381 735 735 MET MET A . n A 1 382 ASP 382 736 736 ASP ASP A . n A 1 383 THR 383 737 737 THR THR A . n A 1 384 CYS 384 738 738 CYS CYS A . n A 1 385 VAL 385 739 739 VAL VAL A . n A 1 386 VAL 386 740 740 VAL VAL A . n A 1 387 ARG 387 741 741 ARG ARG A . n A 1 388 ASN 388 742 742 ASN ASN A . n A 1 389 THR 389 743 743 THR THR A . n A 1 390 ASP 390 744 744 ASP ASP A . n A 1 391 ASP 391 745 745 ASP ASP A . n A 1 392 ILE 392 746 746 ILE ILE A . n A 1 393 LYS 393 747 747 LYS LYS A . n A 1 394 ALA 394 748 748 ALA ALA A . n A 1 395 CYS 395 749 749 CYS CYS A . n A 1 396 GLY 396 750 750 GLY GLY A . n A 1 397 MET 397 751 751 MET MET A . n A 1 398 ALA 398 752 752 ALA ALA A . n A 1 399 ILE 399 753 753 ILE ILE A . n A 1 400 GLY 400 754 754 GLY GLY A . n A 1 401 ASN 401 755 755 ASN ASN A . n A 1 402 GLN 402 756 756 GLN GLN A . n A 1 403 SER 403 757 757 SER SER A . n A 1 404 MET 404 758 758 MET MET A . n A 1 405 VAL 405 759 759 VAL VAL A . n A 1 406 ASN 406 760 760 ASN ASN A . n A 1 407 ASN 407 761 761 ASN ASN A . n A 1 408 PRO 408 762 762 PRO PRO A . n A 1 409 ASP 409 763 763 ASP ASP A . n A 1 410 ASN 410 764 764 ASN ASN A . n A 1 411 TYR 411 765 765 TYR TYR A . n A 1 412 LYS 412 766 766 LYS LYS A . n A 1 413 TYR 413 767 767 TYR TYR A . n A 1 414 LEU 414 768 768 LEU LEU A . n A 1 415 ILE 415 769 769 ILE ILE A . n A 1 416 GLY 416 770 770 GLY GLY A . n A 1 417 LYS 417 771 771 LYS LYS A . n A 1 418 ALA 418 772 772 ALA ALA A . n A 1 419 TRP 419 773 773 TRP TRP A . n A 1 420 LYS 420 774 774 LYS LYS A . n A 1 421 ASN 421 775 775 ASN ASN A . n A 1 422 ILE 422 776 776 ILE ILE A . n A 1 423 GLY 423 777 777 GLY GLY A . n A 1 424 ILE 424 778 778 ILE ILE A . n A 1 425 SER 425 779 779 SER SER A . n A 1 426 LYS 426 780 780 LYS LYS A . n A 1 427 THR 427 781 781 THR THR A . n A 1 428 ALA 428 782 782 ALA ALA A . n A 1 429 ASN 429 783 783 ASN ASN A . n A 1 430 GLY 430 784 784 GLY GLY A . n A 1 431 SER 431 785 785 SER SER A . n A 1 432 LYS 432 786 786 LYS LYS A . n A 1 433 ILE 433 787 787 ILE ILE A . n A 1 434 SER 434 788 788 SER SER A . n A 1 435 VAL 435 789 789 VAL VAL A . n A 1 436 TYR 436 790 790 TYR TYR A . n A 1 437 TYR 437 791 791 TYR TYR A . n A 1 438 LEU 438 792 792 LEU LEU A . n A 1 439 GLY 439 793 793 GLY GLY A . n A 1 440 ASN 440 794 794 ASN ASN A . n A 1 441 SER 441 795 795 SER SER A . n A 1 442 THR 442 796 796 THR THR A . n A 1 443 PRO 443 797 797 PRO PRO A . n A 1 444 THR 444 798 798 THR THR A . n A 1 445 GLU 445 799 799 GLU GLU A . n A 1 446 ASN 446 800 800 ASN ASN A . n A 1 447 GLY 447 801 801 GLY GLY A . n A 1 448 GLY 448 802 802 GLY GLY A . n A 1 449 ASN 449 803 803 ASN ASN A . n A 1 450 THR 450 804 804 THR THR A . n A 1 451 THR 451 805 805 THR THR A . n A 1 452 ASN 452 806 806 ASN ASN A . n A 1 453 LEU 453 807 807 LEU LEU A . n A 1 454 PRO 454 808 808 PRO PRO A . n A 1 455 THR 455 809 809 THR THR A . n A 1 456 ASN 456 810 810 ASN ASN A . n A 1 457 THR 457 811 811 THR THR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . B 2 HOH 11 11 11 HOH HOH A . B 2 HOH 12 12 12 HOH HOH A . B 2 HOH 13 13 13 HOH HOH A . B 2 HOH 14 14 14 HOH HOH A . B 2 HOH 15 15 15 HOH HOH A . B 2 HOH 16 16 16 HOH HOH A . B 2 HOH 17 17 17 HOH HOH A . B 2 HOH 18 18 18 HOH HOH A . B 2 HOH 19 19 19 HOH HOH A . B 2 HOH 20 20 20 HOH HOH A . B 2 HOH 21 21 21 HOH HOH A . B 2 HOH 22 22 22 HOH HOH A . B 2 HOH 23 23 23 HOH HOH A . B 2 HOH 24 24 24 HOH HOH A . B 2 HOH 25 25 25 HOH HOH A . B 2 HOH 26 26 26 HOH HOH A . B 2 HOH 27 27 27 HOH HOH A . B 2 HOH 28 28 28 HOH HOH A . B 2 HOH 29 29 29 HOH HOH A . B 2 HOH 30 30 30 HOH HOH A . B 2 HOH 31 31 31 HOH HOH A . B 2 HOH 32 32 32 HOH HOH A . B 2 HOH 33 33 33 HOH HOH A . B 2 HOH 34 34 34 HOH HOH A . B 2 HOH 35 35 35 HOH HOH A . B 2 HOH 36 36 36 HOH HOH A . B 2 HOH 37 37 37 HOH HOH A . B 2 HOH 38 38 38 HOH HOH A . B 2 HOH 39 39 39 HOH HOH A . B 2 HOH 40 40 40 HOH HOH A . B 2 HOH 41 41 41 HOH HOH A . B 2 HOH 42 42 42 HOH HOH A . B 2 HOH 43 43 43 HOH HOH A . B 2 HOH 44 44 44 HOH HOH A . B 2 HOH 45 45 45 HOH HOH A . B 2 HOH 46 46 46 HOH HOH A . B 2 HOH 47 47 47 HOH HOH A . B 2 HOH 48 48 48 HOH HOH A . B 2 HOH 49 49 49 HOH HOH A . B 2 HOH 50 50 50 HOH HOH A . B 2 HOH 51 51 51 HOH HOH A . B 2 HOH 52 52 52 HOH HOH A . B 2 HOH 53 53 53 HOH HOH A . B 2 HOH 54 54 54 HOH HOH A . B 2 HOH 55 55 55 HOH HOH A . B 2 HOH 56 56 56 HOH HOH A . B 2 HOH 57 57 57 HOH HOH A . B 2 HOH 58 58 58 HOH HOH A . B 2 HOH 59 59 59 HOH HOH A . B 2 HOH 60 60 60 HOH HOH A . B 2 HOH 61 61 61 HOH HOH A . B 2 HOH 62 62 62 HOH HOH A . B 2 HOH 63 63 63 HOH HOH A . B 2 HOH 64 64 64 HOH HOH A . B 2 HOH 65 65 65 HOH HOH A . B 2 HOH 66 66 66 HOH HOH A . B 2 HOH 67 67 67 HOH HOH A . B 2 HOH 68 68 68 HOH HOH A . B 2 HOH 69 69 69 HOH HOH A . B 2 HOH 70 70 70 HOH HOH A . B 2 HOH 71 71 71 HOH HOH A . B 2 HOH 72 72 72 HOH HOH A . B 2 HOH 73 73 73 HOH HOH A . B 2 HOH 74 74 74 HOH HOH A . B 2 HOH 75 75 75 HOH HOH A . B 2 HOH 76 76 76 HOH HOH A . B 2 HOH 77 77 77 HOH HOH A . B 2 HOH 78 78 78 HOH HOH A . B 2 HOH 79 79 79 HOH HOH A . B 2 HOH 80 80 80 HOH HOH A . B 2 HOH 81 81 81 HOH HOH A . B 2 HOH 82 82 82 HOH HOH A . B 2 HOH 83 83 83 HOH HOH A . B 2 HOH 84 84 84 HOH HOH A . B 2 HOH 85 85 85 HOH HOH A . B 2 HOH 86 86 86 HOH HOH A . B 2 HOH 87 87 87 HOH HOH A . B 2 HOH 88 88 88 HOH HOH A . B 2 HOH 89 89 89 HOH HOH A . B 2 HOH 90 90 90 HOH HOH A . B 2 HOH 91 91 91 HOH HOH A . B 2 HOH 92 92 92 HOH HOH A . B 2 HOH 93 93 93 HOH HOH A . B 2 HOH 94 94 94 HOH HOH A . B 2 HOH 95 95 95 HOH HOH A . B 2 HOH 96 96 96 HOH HOH A . B 2 HOH 97 97 97 HOH HOH A . B 2 HOH 98 98 98 HOH HOH A . B 2 HOH 99 99 99 HOH HOH A . B 2 HOH 100 100 100 HOH HOH A . B 2 HOH 101 101 101 HOH HOH A . B 2 HOH 102 102 102 HOH HOH A . B 2 HOH 103 103 103 HOH HOH A . B 2 HOH 104 104 104 HOH HOH A . B 2 HOH 105 105 105 HOH HOH A . B 2 HOH 106 106 106 HOH HOH A . B 2 HOH 107 107 107 HOH HOH A . B 2 HOH 108 108 108 HOH HOH A . B 2 HOH 109 109 109 HOH HOH A . B 2 HOH 110 110 110 HOH HOH A . B 2 HOH 111 111 111 HOH HOH A . B 2 HOH 112 112 112 HOH HOH A . B 2 HOH 113 113 113 HOH HOH A . B 2 HOH 114 114 114 HOH HOH A . B 2 HOH 115 115 115 HOH HOH A . B 2 HOH 116 116 116 HOH HOH A . B 2 HOH 117 117 117 HOH HOH A . B 2 HOH 118 118 118 HOH HOH A . B 2 HOH 119 119 119 HOH HOH A . B 2 HOH 120 120 120 HOH HOH A . B 2 HOH 121 121 121 HOH HOH A . B 2 HOH 122 122 122 HOH HOH A . B 2 HOH 123 123 123 HOH HOH A . B 2 HOH 124 124 124 HOH HOH A . B 2 HOH 125 125 125 HOH HOH A . B 2 HOH 126 126 126 HOH HOH A . B 2 HOH 127 127 127 HOH HOH A . B 2 HOH 128 128 128 HOH HOH A . B 2 HOH 129 129 129 HOH HOH A . B 2 HOH 130 130 130 HOH HOH A . B 2 HOH 131 131 131 HOH HOH A . B 2 HOH 132 132 132 HOH HOH A . B 2 HOH 133 133 133 HOH HOH A . B 2 HOH 134 134 134 HOH HOH A . B 2 HOH 135 135 135 HOH HOH A . B 2 HOH 136 136 136 HOH HOH A . B 2 HOH 137 137 137 HOH HOH A . B 2 HOH 138 138 138 HOH HOH A . B 2 HOH 139 139 139 HOH HOH A . B 2 HOH 140 140 140 HOH HOH A . B 2 HOH 141 141 141 HOH HOH A . B 2 HOH 142 142 142 HOH HOH A . B 2 HOH 143 143 143 HOH HOH A . B 2 HOH 144 144 144 HOH HOH A . B 2 HOH 145 145 145 HOH HOH A . B 2 HOH 146 146 146 HOH HOH A . B 2 HOH 147 147 147 HOH HOH A . B 2 HOH 148 148 148 HOH HOH A . B 2 HOH 149 149 149 HOH HOH A . B 2 HOH 150 150 150 HOH HOH A . B 2 HOH 151 151 151 HOH HOH A . B 2 HOH 152 152 152 HOH HOH A . B 2 HOH 153 153 153 HOH HOH A . B 2 HOH 154 154 154 HOH HOH A . B 2 HOH 155 155 155 HOH HOH A . B 2 HOH 156 156 156 HOH HOH A . B 2 HOH 157 157 157 HOH HOH A . B 2 HOH 158 158 158 HOH HOH A . B 2 HOH 159 159 159 HOH HOH A . B 2 HOH 160 160 160 HOH HOH A . B 2 HOH 161 161 161 HOH HOH A . B 2 HOH 162 162 162 HOH HOH A . B 2 HOH 163 163 163 HOH HOH A . B 2 HOH 164 164 164 HOH HOH A . B 2 HOH 165 165 165 HOH HOH A . B 2 HOH 166 166 166 HOH HOH A . B 2 HOH 167 167 167 HOH HOH A . B 2 HOH 168 168 168 HOH HOH A . B 2 HOH 169 169 169 HOH HOH A . B 2 HOH 170 170 170 HOH HOH A . B 2 HOH 171 171 171 HOH HOH A . B 2 HOH 172 172 172 HOH HOH A . B 2 HOH 173 173 173 HOH HOH A . B 2 HOH 174 174 174 HOH HOH A . B 2 HOH 175 175 175 HOH HOH A . B 2 HOH 176 176 176 HOH HOH A . B 2 HOH 177 177 177 HOH HOH A . B 2 HOH 178 178 178 HOH HOH A . B 2 HOH 179 179 179 HOH HOH A . B 2 HOH 180 180 180 HOH HOH A . B 2 HOH 181 181 181 HOH HOH A . B 2 HOH 182 182 182 HOH HOH A . B 2 HOH 183 183 183 HOH HOH A . B 2 HOH 184 184 184 HOH HOH A . B 2 HOH 185 185 185 HOH HOH A . B 2 HOH 186 186 186 HOH HOH A . B 2 HOH 187 187 187 HOH HOH A . B 2 HOH 188 188 188 HOH HOH A . B 2 HOH 189 189 189 HOH HOH A . B 2 HOH 190 190 190 HOH HOH A . B 2 HOH 191 191 191 HOH HOH A . B 2 HOH 192 192 192 HOH HOH A . B 2 HOH 193 193 193 HOH HOH A . B 2 HOH 194 194 194 HOH HOH A . B 2 HOH 195 195 195 HOH HOH A . B 2 HOH 196 196 196 HOH HOH A . B 2 HOH 197 197 197 HOH HOH A . B 2 HOH 198 198 198 HOH HOH A . B 2 HOH 199 199 199 HOH HOH A . B 2 HOH 200 200 200 HOH HOH A . B 2 HOH 201 201 201 HOH HOH A . B 2 HOH 202 202 202 HOH HOH A . B 2 HOH 203 203 203 HOH HOH A . B 2 HOH 204 204 204 HOH HOH A . B 2 HOH 205 205 205 HOH HOH A . B 2 HOH 206 206 206 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 166 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.900 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 20530 _diffrn_reflns.pdbx_Rmerge_I_obs 0.118 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.00 _diffrn_reflns.av_sigmaI_over_netI 10.80 _diffrn_reflns.pdbx_redundancy 8.30 _diffrn_reflns.pdbx_percent_possible_obs 99.50 _diffrn_reflns.number 170098 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 6.24 50.00 ? ? 0.087 ? 0.947 9.40 99.90 1 4.96 6.24 ? ? 0.094 ? 0.976 9.40 100.00 1 4.33 4.96 ? ? 0.098 ? 1.001 9.10 100.00 1 3.94 4.33 ? ? 0.116 ? 1.019 8.90 100.00 1 3.65 3.94 ? ? 0.143 ? 1.011 8.70 100.00 1 3.44 3.65 ? ? 0.166 ? 1.012 8.60 100.00 1 3.27 3.44 ? ? 0.210 ? 0.987 8.40 100.00 1 3.12 3.27 ? ? 0.294 ? 1.104 8.00 100.00 1 3.00 3.12 ? ? 0.360 ? 1.065 6.90 99.70 1 2.90 3.00 ? ? 0.439 ? 0.870 5.40 95.80 # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 12.3801 _pdbx_refine_tls.origin_y 37.0390 _pdbx_refine_tls.origin_z 20.9406 _pdbx_refine_tls.T[1][1] -0.0555 _pdbx_refine_tls.T[2][2] -0.2030 _pdbx_refine_tls.T[3][3] -0.1325 _pdbx_refine_tls.T[1][2] 0.0484 _pdbx_refine_tls.T[1][3] -0.0212 _pdbx_refine_tls.T[2][3] 0.0479 _pdbx_refine_tls.L[1][1] 1.1877 _pdbx_refine_tls.L[2][2] 1.9862 _pdbx_refine_tls.L[3][3] 1.4772 _pdbx_refine_tls.L[1][2] -0.5766 _pdbx_refine_tls.L[1][3] 0.0796 _pdbx_refine_tls.L[2][3] -1.0713 _pdbx_refine_tls.S[1][1] -0.0955 _pdbx_refine_tls.S[2][2] 0.1046 _pdbx_refine_tls.S[3][3] -0.0092 _pdbx_refine_tls.S[1][2] -0.0423 _pdbx_refine_tls.S[1][3] -0.1371 _pdbx_refine_tls.S[2][3] 0.2508 _pdbx_refine_tls.S[2][1] 0.0510 _pdbx_refine_tls.S[3][1] 0.0057 _pdbx_refine_tls.S[3][2] -0.0171 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 1 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 457 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 355 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 811 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MIRAS # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SHARP . ? package 'de La Fortelle' sharp-develop@globalphasing.com phasing http://babinet.globalphasing.com/sharp/ ? ? 3 DM . ? program 'K. Cowtan' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 5 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 7 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 41 ? ? O A HOH 202 ? ? 1.97 2 1 O A HOH 119 ? ? O A HOH 121 ? ? 2.13 3 1 O A HOH 37 ? ? O A HOH 203 ? ? 2.18 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 548 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 548 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.327 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.075 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 460 ? ? CZ A ARG 460 ? ? NH2 A ARG 460 ? ? 117.20 120.30 -3.10 0.50 N 2 1 CB A VAL 509 ? ? CA A VAL 509 ? ? C A VAL 509 ? ? 99.62 111.40 -11.78 1.90 N 3 1 CB A LEU 517 ? ? CG A LEU 517 ? ? CD2 A LEU 517 ? ? 124.50 111.00 13.50 1.70 N 4 1 C A ILE 776 ? ? N A GLY 777 ? ? CA A GLY 777 ? ? 109.33 122.30 -12.97 2.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 383 ? ? -174.79 149.00 2 1 SER A 396 ? ? -106.12 -110.74 3 1 ASN A 397 ? ? -105.32 -127.55 4 1 SER A 400 ? ? -144.23 25.10 5 1 ARG A 402 ? ? -58.47 75.98 6 1 THR A 403 ? ? 84.24 129.49 7 1 THR A 410 ? ? -136.30 -45.76 8 1 TYR A 428 ? ? 114.71 129.87 9 1 ASN A 447 ? ? -140.73 31.09 10 1 ASP A 455 ? ? -47.97 150.04 11 1 LYS A 474 ? ? -76.18 -103.62 12 1 ASN A 493 ? ? -119.17 -70.72 13 1 ALA A 503 ? ? -158.96 -70.77 14 1 LYS A 510 ? ? -102.32 -61.77 15 1 SER A 553 ? ? 82.64 -16.75 16 1 SER A 563 ? ? 176.90 160.74 17 1 TRP A 577 ? ? 70.97 31.39 18 1 ARG A 592 ? ? -140.36 -57.26 19 1 ASN A 611 ? ? -82.98 -86.85 20 1 ASN A 658 ? ? -129.64 -109.60 21 1 THR A 708 ? ? -38.72 -26.87 22 1 ASN A 711 ? ? 94.69 6.89 23 1 ASN A 783 ? ? -124.93 -167.73 24 1 ASN A 800 ? ? -97.41 35.81 25 1 THR A 809 ? ? 65.76 85.75 26 1 ASN A 810 ? ? -76.37 -93.38 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 SER A 396 ? ? ASN A 397 ? ? -144.25 2 1 ASN A 711 ? ? GLY A 712 ? ? -144.32 3 1 GLY A 777 ? ? ILE A 778 ? ? 134.59 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 367 ? A ASP 13 2 1 Y 1 A GLY 368 ? A GLY 14 3 1 Y 1 A THR 369 ? A THR 15 4 1 Y 1 A ILE 370 ? A ILE 16 5 1 Y 1 A LYS 371 ? A LYS 17 6 1 Y 1 A VAL 372 ? A VAL 18 7 1 Y 1 A GLY 373 ? A GLY 19 8 1 Y 1 A GLY 374 ? A GLY 20 9 1 Y 1 A PHE 375 ? A PHE 21 10 1 Y 1 A LYS 376 ? A LYS 22 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #