HEADER TRANSFERASE/TRANSFERASE REGULATOR 08-AUG-07 2QVS TITLE CRYSTAL STRUCTURE OF TYPE IIA HOLOENZYME OF CAMP-DEPENDENT PROTEIN TITLE 2 KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT; COMPND 3 CHAIN: E; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE TYPE II-ALPHA REGULATORY COMPND 9 SUBUNIT; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PRKACA, PKACA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSET; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: PRKAR2A; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PRSET KEYWDS CAMP-DEPENDENT PROTEIN KINASE, TYPE IIA HOLOENZYME, ISOFORM KEYWDS 2 DIVERSITY, ALTERNATIVE SPLICING, ATP-BINDING, CYTOPLASM, KEYWDS 3 LIPOPROTEIN, MYRISTATE, NUCLEOTIDE-BINDING, NUCLEUS, KEYWDS 4 PHOSPHORYLATION, SERINE/THREONINE-PROTEIN KINASE, TRANSFERASE, KEYWDS 5 ACETYLATION, CAMP-BINDING, TRANSFERASE-TRANSFERASE REGULATOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.WU,S.H.J.BROWN,S.VON DAAKE,S.S.TAYLOR REVDAT 3 30-AUG-23 2QVS 1 LINK REVDAT 2 24-FEB-09 2QVS 1 VERSN REVDAT 1 23-OCT-07 2QVS 0 JRNL AUTH J.WU,S.H.J.BROWN,S.VON DAAKE,S.S.TAYLOR JRNL TITL PKA TYPE IIALPHA HOLOENZYME REVEALS A COMBINATORIAL STRATEGY JRNL TITL 2 FOR ISOFORM DIVERSITY. JRNL REF SCIENCE V. 318 274 2007 JRNL REFN ISSN 0036-8075 JRNL PMID 17932298 JRNL DOI 10.1126/SCIENCE.1146447 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 78.4 REMARK 3 NUMBER OF REFLECTIONS : 26790 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1309 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.59 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 54 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.035 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4875 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 181 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.82000 REMARK 3 B22 (A**2) : 3.65000 REMARK 3 B33 (A**2) : 0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM SIGMAA (A) : 0.29 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.38 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.28 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.960 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2QVS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000044117. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 200.0 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33730 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07600 REMARK 200 FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.45400 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1ATP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9 M SODIUM FORMATE, PH 5.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295.5K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.95000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.95000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3510 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY E 1 REMARK 465 ASN E 2 REMARK 465 ALA E 3 REMARK 465 ALA E 4 REMARK 465 ALA E 5 REMARK 465 ALA E 6 REMARK 465 LYS E 7 REMARK 465 LYS E 8 REMARK 465 GLY E 9 REMARK 465 SER E 10 REMARK 465 GLU E 11 REMARK 465 GLN E 12 REMARK 465 LYS E 319 REMARK 465 GLY E 320 REMARK 465 PRO E 321 REMARK 465 GLY E 322 REMARK 465 ASP E 323 REMARK 465 THR E 324 REMARK 465 SER E 325 REMARK 465 ASN E 326 REMARK 465 PHE E 327 REMARK 465 ASP E 328 REMARK 465 ASP E 329 REMARK 465 TYR E 330 REMARK 465 GLU E 331 REMARK 465 ASN B 110 REMARK 465 ASP B 111 REMARK 465 PRO B 112 REMARK 465 ARG B 113 REMARK 465 LEU B 393 REMARK 465 ASP B 394 REMARK 465 LEU B 395 REMARK 465 MET B 396 REMARK 465 ASP B 397 REMARK 465 PRO B 398 REMARK 465 GLY B 399 REMARK 465 GLN B 400 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN E 42 CG CD OE1 NE2 REMARK 470 PHE E 43 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP E 44 CG OD1 OD2 REMARK 470 ARG E 45 CG CD NE CZ NH1 NH2 REMARK 470 ILE E 46 CG1 CG2 CD1 REMARK 470 LYS E 47 CG CD CE NZ REMARK 470 THR E 48 OG1 CG2 REMARK 470 LEU E 49 CG CD1 CD2 REMARK 470 THR E 51 OG1 CG2 REMARK 470 SER E 53 OG REMARK 470 PHE E 54 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG E 56 CG CD NE CZ NH1 NH2 REMARK 470 VAL E 57 CG1 CG2 REMARK 470 MET E 58 CG SD CE REMARK 470 VAL E 60 CG1 CG2 REMARK 470 LYS E 61 CG CD CE NZ REMARK 470 LYS E 63 CG CD CE NZ REMARK 470 GLU E 64 CG CD OE1 OE2 REMARK 470 SER E 65 OG REMARK 470 MET E 71 CG SD CE REMARK 470 LYS E 72 CG CD CE NZ REMARK 470 ILE E 73 CG1 CG2 CD1 REMARK 470 LEU E 74 CG CD1 CD2 REMARK 470 ASP E 75 CG OD1 OD2 REMARK 470 LYS E 76 CG CD CE NZ REMARK 470 GLN E 77 CG CD OE1 NE2 REMARK 470 LYS E 78 CG CD CE NZ REMARK 470 VAL E 79 CG1 CG2 REMARK 470 VAL E 80 CG1 CG2 REMARK 470 LYS E 81 CG CD CE NZ REMARK 470 LEU E 82 CG CD1 CD2 REMARK 470 LYS E 111 CG CD CE NZ REMARK 470 ASP E 112 CG OD1 OD2 REMARK 470 ASN E 113 CG OD1 ND2 REMARK 470 SER E 114 OG REMARK 470 ASN E 115 CG OD1 ND2 REMARK 470 LEU E 116 CG CD1 CD2 REMARK 470 TYR E 117 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET E 118 CG SD CE REMARK 470 VAL E 119 CG1 CG2 REMARK 470 GLU E 332 CG CD OE1 OE2 REMARK 470 GLU E 333 CG CD OE1 OE2 REMARK 470 GLU E 334 CG CD OE1 OE2 REMARK 470 ILE E 335 CG1 CG2 CD1 REMARK 470 ARG E 336 CG CD NE CZ NH1 NH2 REMARK 470 ILE E 339 CG1 CG2 CD1 REMARK 470 LYS E 345 CG CD CE NZ REMARK 470 GLU E 349 CG CD OE1 OE2 REMARK 470 SER B 308 OG REMARK 470 LYS B 309 CG CD CE NZ REMARK 470 THR B 310 OG1 CG2 REMARK 470 LYS B 311 CG CD CE NZ REMARK 470 SER B 312 OG REMARK 470 ASN B 313 CG OD1 ND2 REMARK 470 LYS B 314 CG CD CE NZ REMARK 470 ASN B 315 CG OD1 ND2 REMARK 470 ASN B 318 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL E 80 CB - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 LYS E 81 N - CA - CB ANGL. DEV. = 16.4 DEGREES REMARK 500 LYS E 81 CA - C - N ANGL. DEV. = -13.5 DEGREES REMARK 500 ASN E 113 CB - CA - C ANGL. DEV. = -15.0 DEGREES REMARK 500 SER E 114 CB - CA - C ANGL. DEV. = 15.3 DEGREES REMARK 500 SER E 114 N - CA - CB ANGL. DEV. = 10.0 DEGREES REMARK 500 SER E 114 CA - C - O ANGL. DEV. = 18.9 DEGREES REMARK 500 SER E 114 CA - C - N ANGL. DEV. = -21.6 DEGREES REMARK 500 ASN E 115 CB - CA - C ANGL. DEV. = -12.5 DEGREES REMARK 500 ASN E 115 N - CA - C ANGL. DEV. = 23.8 DEGREES REMARK 500 LEU E 116 CB - CA - C ANGL. DEV. = -12.7 DEGREES REMARK 500 LEU E 116 CA - C - O ANGL. DEV. = 23.2 DEGREES REMARK 500 LEU E 116 CA - C - N ANGL. DEV. = -23.6 DEGREES REMARK 500 LYS B 314 CB - CA - C ANGL. DEV. = -12.7 DEGREES REMARK 500 LYS B 314 N - CA - C ANGL. DEV. = 20.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR E 32 62.36 -164.49 REMARK 500 ASN E 36 85.65 11.41 REMARK 500 THR E 37 -75.10 -84.71 REMARK 500 ASP E 44 -111.55 -86.74 REMARK 500 ARG E 45 138.95 172.40 REMARK 500 ILE E 46 -118.91 -126.54 REMARK 500 LYS E 47 -169.69 -67.34 REMARK 500 THR E 48 61.16 -150.31 REMARK 500 THR E 51 -109.64 -99.09 REMARK 500 SER E 53 11.86 -161.92 REMARK 500 LYS E 63 -97.16 -78.02 REMARK 500 VAL E 79 -159.77 -61.92 REMARK 500 VAL E 80 -28.07 71.61 REMARK 500 LYS E 81 -133.27 -95.65 REMARK 500 LEU E 82 -139.73 53.26 REMARK 500 HIS E 87 1.50 -57.12 REMARK 500 ASP E 112 107.95 160.60 REMARK 500 ASN E 113 -27.78 53.29 REMARK 500 ASN E 115 109.86 37.98 REMARK 500 LEU E 116 89.98 87.83 REMARK 500 ASP E 166 33.61 -150.39 REMARK 500 LYS E 168 150.15 176.81 REMARK 500 ASP E 184 91.61 66.05 REMARK 500 PHE E 185 33.08 -98.74 REMARK 500 ASN E 216 -121.38 -153.13 REMARK 500 LEU E 273 53.75 -93.70 REMARK 500 GLU E 333 -162.89 -162.36 REMARK 500 VAL E 337 -160.59 -64.50 REMARK 500 ILE E 339 10.16 59.09 REMARK 500 LYS E 342 -105.31 -95.34 REMARK 500 CYS E 343 19.54 -52.05 REMARK 500 GLU E 346 -37.82 -166.41 REMARK 500 GLU B 107 102.40 164.93 REMARK 500 GLU B 108 110.02 -12.85 REMARK 500 LYS B 137 -49.59 -28.79 REMARK 500 ASP B 159 -4.51 83.58 REMARK 500 ASP B 187 -138.81 63.35 REMARK 500 ASP B 280 132.24 -35.74 REMARK 500 SER B 299 143.26 -174.62 REMARK 500 SER B 308 77.04 -55.40 REMARK 500 LYS B 309 -43.77 -130.09 REMARK 500 THR B 310 50.57 -69.57 REMARK 500 SER B 312 -85.90 157.53 REMARK 500 ASN B 313 81.89 -176.65 REMARK 500 LYS B 314 74.29 69.36 REMARK 500 ASN B 315 179.13 135.19 REMARK 500 GLN B 319 -123.79 -157.86 REMARK 500 ASN B 340 56.05 -141.81 REMARK 500 SER B 391 -79.69 -46.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U7E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RIA(91-244):C COMPLEX OF CAMP-DEPENDENT REMARK 900 PROTEIN KINASE REMARK 900 RELATED ID: 1CX4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TYPE II BETA REGULATORY SUBUNIT OF CAMP- REMARK 900 DEPENDENT PROTEIN KINASE REMARK 900 RELATED ID: 1RGS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TYPE IA REGULATORY SUBUNIT OF CAMP- REMARK 900 DEPENDENT PROTEIN KINASE DBREF 2QVS E 1 350 UNP P05132 KAPCA_MOUSE 2 351 DBREF 2QVS B 91 400 UNP P12367 KAP2_MOUSE 92 401 SEQRES 1 E 350 GLY ASN ALA ALA ALA ALA LYS LYS GLY SER GLU GLN GLU SEQRES 2 E 350 SER VAL LYS GLU PHE LEU ALA LYS ALA LYS GLU ASP PHE SEQRES 3 E 350 LEU LYS LYS TRP GLU THR PRO SER GLN ASN THR ALA GLN SEQRES 4 E 350 LEU ASP GLN PHE ASP ARG ILE LYS THR LEU GLY THR GLY SEQRES 5 E 350 SER PHE GLY ARG VAL MET LEU VAL LYS HIS LYS GLU SER SEQRES 6 E 350 GLY ASN HIS TYR ALA MET LYS ILE LEU ASP LYS GLN LYS SEQRES 7 E 350 VAL VAL LYS LEU LYS GLN ILE GLU HIS THR LEU ASN GLU SEQRES 8 E 350 LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO PHE LEU VAL SEQRES 9 E 350 LYS LEU GLU PHE SER PHE LYS ASP ASN SER ASN LEU TYR SEQRES 10 E 350 MET VAL MET GLU TYR VAL ALA GLY GLY GLU MET PHE SER SEQRES 11 E 350 HIS LEU ARG ARG ILE GLY ARG PHE SER GLU PRO HIS ALA SEQRES 12 E 350 ARG PHE TYR ALA ALA GLN ILE VAL LEU THR PHE GLU TYR SEQRES 13 E 350 LEU HIS SER LEU ASP LEU ILE TYR ARG ASP LEU LYS PRO SEQRES 14 E 350 GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR ILE GLN VAL SEQRES 15 E 350 THR ASP PHE GLY PHE ALA LYS ARG VAL LYS GLY ARG THR SEQRES 16 E 350 TRP TPO LEU CYS GLY THR PRO GLU TYR LEU ALA PRO GLU SEQRES 17 E 350 ILE ILE LEU SER LYS GLY TYR ASN LYS ALA VAL ASP TRP SEQRES 18 E 350 TRP ALA LEU GLY VAL LEU ILE TYR GLU MET ALA ALA GLY SEQRES 19 E 350 TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE GLN ILE TYR SEQRES 20 E 350 GLU LYS ILE VAL SER GLY LYS VAL ARG PHE PRO SER HIS SEQRES 21 E 350 PHE SER SER ASP LEU LYS ASP LEU LEU ARG ASN LEU LEU SEQRES 22 E 350 GLN VAL ASP LEU THR LYS ARG PHE GLY ASN LEU LYS ASN SEQRES 23 E 350 GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP PHE ALA THR SEQRES 24 E 350 THR ASP TRP ILE ALA ILE TYR GLN ARG LYS VAL GLU ALA SEQRES 25 E 350 PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY ASP THR SER SEQRES 26 E 350 ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE ARG VAL SEP SEQRES 27 E 350 ILE ASN GLU LYS CYS GLY LYS GLU PHE THR GLU PHE SEQRES 1 B 310 THR ARG ARG VAL SER VAL CYS ALA GLU THR PHE ASN PRO SEQRES 2 B 310 ASP GLU GLU GLU GLU ASP ASN ASP PRO ARG VAL VAL HIS SEQRES 3 B 310 PRO LYS THR ASP GLU GLN ARG CYS ARG LEU GLN GLU ALA SEQRES 4 B 310 CYS LYS ASP ILE LEU LEU PHE LYS ASN LEU ASP GLN GLU SEQRES 5 B 310 GLN LEU SER GLN VAL LEU ASP ALA MET PHE GLU LYS ILE SEQRES 6 B 310 VAL LYS THR ASP GLU HIS VAL ILE ASP GLN GLY ASP ASP SEQRES 7 B 310 GLY ASP ASN PHE TYR VAL ILE GLU ARG GLY THR TYR ASP SEQRES 8 B 310 ILE LEU VAL THR LYS ASP ASN GLN THR ARG SER VAL GLY SEQRES 9 B 310 GLN TYR ASP ASN ARG GLY SER PHE GLY GLU LEU ALA LEU SEQRES 10 B 310 MET TYR ASN THR PRO ARG ALA ALA THR ILE ILE ALA THR SEQRES 11 B 310 SER GLU GLY SER LEU TRP GLY LEU ASP ARG VAL THR PHE SEQRES 12 B 310 ARG ARG ILE ILE VAL LYS ASN ASN ALA LYS LYS ARG LYS SEQRES 13 B 310 MET PHE GLU SER PHE ILE GLU SER VAL PRO LEU PHE LYS SEQRES 14 B 310 SER LEU GLU MET SER GLU ARG MET LYS ILE VAL ASP VAL SEQRES 15 B 310 ILE GLY GLU LYS ILE TYR LYS ASP GLY GLU ARG ILE ILE SEQRES 16 B 310 ALA GLN GLY GLU LYS ALA ASP SER PHE TYR ILE ILE GLU SEQRES 17 B 310 SER GLY GLU VAL SER ILE LEU ILE ARG SER LYS THR LYS SEQRES 18 B 310 SER ASN LYS ASN GLY GLY ASN GLN GLU VAL GLU ILE ALA SEQRES 19 B 310 HIS CYS HIS LYS GLY GLN TYR PHE GLY GLU LEU ALA LEU SEQRES 20 B 310 VAL THR ASN LYS PRO ARG ALA ALA SER ALA TYR GLY VAL SEQRES 21 B 310 GLY ASP VAL LYS CYS LEU VAL MET ASP VAL GLN ALA PHE SEQRES 22 B 310 GLU ARG LEU LEU GLY PRO CYS MET ASP ILE MET LYS ARG SEQRES 23 B 310 ASN ILE SER HIS TYR GLU GLU GLN LEU VAL LYS MET PHE SEQRES 24 B 310 GLY SER ASN LEU ASP LEU MET ASP PRO GLY GLN MODRES 2QVS TPO E 197 THR PHOSPHOTHREONINE MODRES 2QVS SEP E 338 SER PHOSPHOSERINE HET TPO E 197 11 HET SEP E 338 10 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 1 SEP C3 H8 N O6 P FORMUL 3 HOH *181(H2 O) HELIX 1 1 GLU E 13 GLU E 31 1 19 HELIX 2 2 GLN E 39 PHE E 43 5 5 HELIX 3 3 ILE E 85 VAL E 98 1 14 HELIX 4 4 MET E 128 GLY E 136 1 9 HELIX 5 5 SER E 139 LEU E 160 1 22 HELIX 6 6 LYS E 168 GLU E 170 5 3 HELIX 7 7 THR E 201 LEU E 205 5 5 HELIX 8 8 ALA E 206 LEU E 211 1 6 HELIX 9 9 LYS E 217 GLY E 234 1 18 HELIX 10 10 GLN E 242 GLY E 253 1 12 HELIX 11 11 SER E 262 LEU E 273 1 12 HELIX 12 12 VAL E 288 ASN E 293 1 6 HELIX 13 13 HIS E 294 ALA E 298 5 5 HELIX 14 14 ASP E 301 GLN E 307 1 7 HELIX 15 15 LYS E 342 GLU E 346 5 5 HELIX 16 16 THR B 119 LYS B 131 1 13 HELIX 17 17 ILE B 133 ASN B 138 1 6 HELIX 18 18 ASP B 140 MET B 151 1 12 HELIX 19 19 GLY B 203 MET B 208 5 6 HELIX 20 20 ARG B 230 SER B 254 1 25 HELIX 21 21 VAL B 255 LYS B 259 5 5 HELIX 22 22 GLU B 262 ILE B 273 1 12 HELIX 23 23 GLY B 333 VAL B 338 5 6 HELIX 24 24 VAL B 360 GLY B 368 1 9 HELIX 25 25 PRO B 369 ASN B 377 1 9 HELIX 26 26 HIS B 380 GLY B 390 1 11 SHEET 1 A 4 ARG E 56 LYS E 61 0 SHEET 2 A 4 HIS E 68 ILE E 73 -1 O TYR E 69 N VAL E 60 SHEET 3 A 4 TYR E 117 GLU E 121 -1 O MET E 120 N ALA E 70 SHEET 4 A 4 LEU E 106 PHE E 110 -1 N PHE E 108 O VAL E 119 SHEET 1 B 3 GLY E 126 GLU E 127 0 SHEET 2 B 3 LEU E 172 ILE E 174 -1 O ILE E 174 N GLY E 126 SHEET 3 B 3 ILE E 180 VAL E 182 -1 O GLN E 181 N LEU E 173 SHEET 1 C 2 LEU E 162 ILE E 163 0 SHEET 2 C 2 LYS E 189 ARG E 190 -1 O LYS E 189 N ILE E 163 SHEET 1 D 2 CYS E 199 GLY E 200 0 SHEET 2 D 2 VAL B 96 CYS B 97 -1 O VAL B 96 N GLY E 200 SHEET 1 E 4 PHE B 152 VAL B 156 0 SHEET 2 E 4 GLY B 223 ASP B 229 -1 O GLY B 227 N PHE B 152 SHEET 3 E 4 ASN B 171 ARG B 177 -1 N VAL B 174 O TRP B 226 SHEET 4 E 4 SER B 201 PHE B 202 -1 O PHE B 202 N TYR B 173 SHEET 1 F 4 HIS B 161 ILE B 163 0 SHEET 2 F 4 THR B 216 ALA B 219 -1 O ILE B 217 N VAL B 162 SHEET 3 F 4 THR B 179 LYS B 186 -1 N LEU B 183 O THR B 216 SHEET 4 F 4 GLN B 189 ASP B 197 -1 O GLY B 194 N ILE B 182 SHEET 1 G 4 GLY B 274 TYR B 278 0 SHEET 2 G 4 SER B 346 ASP B 359 -1 O VAL B 353 N TYR B 278 SHEET 3 G 4 SER B 293 ILE B 306 -1 N GLU B 301 O VAL B 350 SHEET 4 G 4 VAL B 321 HIS B 327 -1 O VAL B 321 N ILE B 306 SHEET 1 H 4 ARG B 283 ILE B 285 0 SHEET 2 H 4 SER B 346 ASP B 359 -1 O ALA B 347 N ILE B 284 SHEET 3 H 4 SER B 293 ILE B 306 -1 N GLU B 301 O VAL B 350 SHEET 4 H 4 TYR B 331 PHE B 332 -1 O PHE B 332 N TYR B 295 LINK C TRP E 196 N TPO E 197 1555 1555 1.33 LINK C TPO E 197 N LEU E 198 1555 1555 1.33 LINK C VAL E 337 N SEP E 338 1555 1555 1.33 LINK C SEP E 338 N ILE E 339 1555 1555 1.33 CRYST1 87.900 92.900 118.000 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011377 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010764 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008475 0.00000