data_2QYL # _entry.id 2QYL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2QYL pdb_00002qyl 10.2210/pdb2qyl/pdb RCSB RCSB044207 ? ? WWPDB D_1000044207 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.value' 6 3 'Structure model' '_struct_conn.pdbx_dist_value' 7 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 10 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 11 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 13 3 'Structure model' '_struct_ref_seq_dif.details' 14 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 15 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 16 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2QYL _pdbx_database_status.recvd_initial_deposition_date 2007-08-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2qyk . unspecified PDB 2qym . unspecified PDB 2qyn . unspecified # _audit_author.name 'Ke, H.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structures of the four subfamilies of phosphodiesterase-4 provide insight into the selectivity of their inhibitors.' _citation.journal_abbrev Biochem.J. _citation.journal_volume 408 _citation.page_first 193 _citation.page_last 201 _citation.year 2007 _citation.journal_id_ASTM BIJOAK _citation.country UK _citation.journal_id_ISSN 0264-6021 _citation.journal_id_CSD 0043 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17727341 _citation.pdbx_database_id_DOI 10.1042/BJ20070970 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, H.' 1 ? primary 'Peng, M.S.' 2 ? primary 'Chen, Y.' 3 ? primary 'Geng, J.' 4 ? primary 'Robinson, H.' 5 ? primary 'Houslay, M.D.' 6 ? primary 'Cai, J.' 7 ? primary 'Ke, H.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phosphodiesterase 4B, cAMP-specific' 38848.988 1 ? ? 'the catalytic domain of PDE4B2B with residues 152-487' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 non-polymer syn '4-[8-(3-nitrophenyl)-1,7-naphthyridin-6-yl]benzoic acid' 371.346 1 ? ? ? ? 5 water nat water 18.015 68 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSISRFGVNTENEDHLAKELEDLNKWGLNIFNVAGYSHNRPLTCIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSD VAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAV GFKLLQEEHCDIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHC ADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVQPDAQDIL DTLEDNRNWYQSMIPQS ; _entity_poly.pdbx_seq_one_letter_code_can ;MSISRFGVNTENEDHLAKELEDLNKWGLNIFNVAGYSHNRPLTCIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSD VAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAV GFKLLQEEHCDIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHC ADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVQPDAQDIL DTLEDNRNWYQSMIPQS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'MAGNESIUM ION' MG 4 '4-[8-(3-nitrophenyl)-1,7-naphthyridin-6-yl]benzoic acid' NPV 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 ILE n 1 4 SER n 1 5 ARG n 1 6 PHE n 1 7 GLY n 1 8 VAL n 1 9 ASN n 1 10 THR n 1 11 GLU n 1 12 ASN n 1 13 GLU n 1 14 ASP n 1 15 HIS n 1 16 LEU n 1 17 ALA n 1 18 LYS n 1 19 GLU n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LEU n 1 24 ASN n 1 25 LYS n 1 26 TRP n 1 27 GLY n 1 28 LEU n 1 29 ASN n 1 30 ILE n 1 31 PHE n 1 32 ASN n 1 33 VAL n 1 34 ALA n 1 35 GLY n 1 36 TYR n 1 37 SER n 1 38 HIS n 1 39 ASN n 1 40 ARG n 1 41 PRO n 1 42 LEU n 1 43 THR n 1 44 CYS n 1 45 ILE n 1 46 MET n 1 47 TYR n 1 48 ALA n 1 49 ILE n 1 50 PHE n 1 51 GLN n 1 52 GLU n 1 53 ARG n 1 54 ASP n 1 55 LEU n 1 56 LEU n 1 57 LYS n 1 58 THR n 1 59 PHE n 1 60 ARG n 1 61 ILE n 1 62 SER n 1 63 SER n 1 64 ASP n 1 65 THR n 1 66 PHE n 1 67 ILE n 1 68 THR n 1 69 TYR n 1 70 MET n 1 71 MET n 1 72 THR n 1 73 LEU n 1 74 GLU n 1 75 ASP n 1 76 HIS n 1 77 TYR n 1 78 HIS n 1 79 SER n 1 80 ASP n 1 81 VAL n 1 82 ALA n 1 83 TYR n 1 84 HIS n 1 85 ASN n 1 86 SER n 1 87 LEU n 1 88 HIS n 1 89 ALA n 1 90 ALA n 1 91 ASP n 1 92 VAL n 1 93 ALA n 1 94 GLN n 1 95 SER n 1 96 THR n 1 97 HIS n 1 98 VAL n 1 99 LEU n 1 100 LEU n 1 101 SER n 1 102 THR n 1 103 PRO n 1 104 ALA n 1 105 LEU n 1 106 ASP n 1 107 ALA n 1 108 VAL n 1 109 PHE n 1 110 THR n 1 111 ASP n 1 112 LEU n 1 113 GLU n 1 114 ILE n 1 115 LEU n 1 116 ALA n 1 117 ALA n 1 118 ILE n 1 119 PHE n 1 120 ALA n 1 121 ALA n 1 122 ALA n 1 123 ILE n 1 124 HIS n 1 125 ASP n 1 126 VAL n 1 127 ASP n 1 128 HIS n 1 129 PRO n 1 130 GLY n 1 131 VAL n 1 132 SER n 1 133 ASN n 1 134 GLN n 1 135 PHE n 1 136 LEU n 1 137 ILE n 1 138 ASN n 1 139 THR n 1 140 ASN n 1 141 SER n 1 142 GLU n 1 143 LEU n 1 144 ALA n 1 145 LEU n 1 146 MET n 1 147 TYR n 1 148 ASN n 1 149 ASP n 1 150 GLU n 1 151 SER n 1 152 VAL n 1 153 LEU n 1 154 GLU n 1 155 ASN n 1 156 HIS n 1 157 HIS n 1 158 LEU n 1 159 ALA n 1 160 VAL n 1 161 GLY n 1 162 PHE n 1 163 LYS n 1 164 LEU n 1 165 LEU n 1 166 GLN n 1 167 GLU n 1 168 GLU n 1 169 HIS n 1 170 CYS n 1 171 ASP n 1 172 ILE n 1 173 PHE n 1 174 MET n 1 175 ASN n 1 176 LEU n 1 177 THR n 1 178 LYS n 1 179 LYS n 1 180 GLN n 1 181 ARG n 1 182 GLN n 1 183 THR n 1 184 LEU n 1 185 ARG n 1 186 LYS n 1 187 MET n 1 188 VAL n 1 189 ILE n 1 190 ASP n 1 191 MET n 1 192 VAL n 1 193 LEU n 1 194 ALA n 1 195 THR n 1 196 ASP n 1 197 MET n 1 198 SER n 1 199 LYS n 1 200 HIS n 1 201 MET n 1 202 SER n 1 203 LEU n 1 204 LEU n 1 205 ALA n 1 206 ASP n 1 207 LEU n 1 208 LYS n 1 209 THR n 1 210 MET n 1 211 VAL n 1 212 GLU n 1 213 THR n 1 214 LYS n 1 215 LYS n 1 216 VAL n 1 217 THR n 1 218 SER n 1 219 SER n 1 220 GLY n 1 221 VAL n 1 222 LEU n 1 223 LEU n 1 224 LEU n 1 225 ASP n 1 226 ASN n 1 227 TYR n 1 228 THR n 1 229 ASP n 1 230 ARG n 1 231 ILE n 1 232 GLN n 1 233 VAL n 1 234 LEU n 1 235 ARG n 1 236 ASN n 1 237 MET n 1 238 VAL n 1 239 HIS n 1 240 CYS n 1 241 ALA n 1 242 ASP n 1 243 LEU n 1 244 SER n 1 245 ASN n 1 246 PRO n 1 247 THR n 1 248 LYS n 1 249 SER n 1 250 LEU n 1 251 GLU n 1 252 LEU n 1 253 TYR n 1 254 ARG n 1 255 GLN n 1 256 TRP n 1 257 THR n 1 258 ASP n 1 259 ARG n 1 260 ILE n 1 261 MET n 1 262 GLU n 1 263 GLU n 1 264 PHE n 1 265 PHE n 1 266 GLN n 1 267 GLN n 1 268 GLY n 1 269 ASP n 1 270 LYS n 1 271 GLU n 1 272 ARG n 1 273 GLU n 1 274 ARG n 1 275 GLY n 1 276 MET n 1 277 GLU n 1 278 ILE n 1 279 SER n 1 280 PRO n 1 281 MET n 1 282 CYS n 1 283 ASP n 1 284 LYS n 1 285 HIS n 1 286 THR n 1 287 ALA n 1 288 SER n 1 289 VAL n 1 290 GLU n 1 291 LYS n 1 292 SER n 1 293 GLN n 1 294 VAL n 1 295 GLY n 1 296 PHE n 1 297 ILE n 1 298 ASP n 1 299 TYR n 1 300 ILE n 1 301 VAL n 1 302 HIS n 1 303 PRO n 1 304 LEU n 1 305 TRP n 1 306 GLU n 1 307 THR n 1 308 TRP n 1 309 ALA n 1 310 ASP n 1 311 LEU n 1 312 VAL n 1 313 GLN n 1 314 PRO n 1 315 ASP n 1 316 ALA n 1 317 GLN n 1 318 ASP n 1 319 ILE n 1 320 LEU n 1 321 ASP n 1 322 THR n 1 323 LEU n 1 324 GLU n 1 325 ASP n 1 326 ASN n 1 327 ARG n 1 328 ASN n 1 329 TRP n 1 330 TYR n 1 331 GLN n 1 332 SER n 1 333 MET n 1 334 ILE n 1 335 PRO n 1 336 GLN n 1 337 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene PDE4B _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NPV non-polymer . '4-[8-(3-nitrophenyl)-1,7-naphthyridin-6-yl]benzoic acid' ? 'C21 H13 N3 O4' 371.346 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 151 151 MET MET A . n A 1 2 SER 2 152 152 SER SER A . n A 1 3 ILE 3 153 153 ILE ILE A . n A 1 4 SER 4 154 154 SER SER A . n A 1 5 ARG 5 155 155 ARG ARG A . n A 1 6 PHE 6 156 156 PHE PHE A . n A 1 7 GLY 7 157 157 GLY GLY A . n A 1 8 VAL 8 158 158 VAL VAL A . n A 1 9 ASN 9 159 159 ASN ASN A . n A 1 10 THR 10 160 160 THR THR A . n A 1 11 GLU 11 161 161 GLU GLU A . n A 1 12 ASN 12 162 162 ASN ASN A . n A 1 13 GLU 13 163 163 GLU GLU A . n A 1 14 ASP 14 164 164 ASP ASP A . n A 1 15 HIS 15 165 165 HIS HIS A . n A 1 16 LEU 16 166 166 LEU LEU A . n A 1 17 ALA 17 167 167 ALA ALA A . n A 1 18 LYS 18 168 168 LYS LYS A . n A 1 19 GLU 19 169 169 GLU GLU A . n A 1 20 LEU 20 170 170 LEU LEU A . n A 1 21 GLU 21 171 171 GLU GLU A . n A 1 22 ASP 22 172 172 ASP ASP A . n A 1 23 LEU 23 173 173 LEU LEU A . n A 1 24 ASN 24 174 174 ASN ASN A . n A 1 25 LYS 25 175 175 LYS LYS A . n A 1 26 TRP 26 176 176 TRP TRP A . n A 1 27 GLY 27 177 177 GLY GLY A . n A 1 28 LEU 28 178 178 LEU LEU A . n A 1 29 ASN 29 179 179 ASN ASN A . n A 1 30 ILE 30 180 180 ILE ILE A . n A 1 31 PHE 31 181 181 PHE PHE A . n A 1 32 ASN 32 182 182 ASN ASN A . n A 1 33 VAL 33 183 183 VAL VAL A . n A 1 34 ALA 34 184 184 ALA ALA A . n A 1 35 GLY 35 185 185 GLY GLY A . n A 1 36 TYR 36 186 186 TYR TYR A . n A 1 37 SER 37 187 187 SER SER A . n A 1 38 HIS 38 188 188 HIS HIS A . n A 1 39 ASN 39 189 189 ASN ASN A . n A 1 40 ARG 40 190 190 ARG ARG A . n A 1 41 PRO 41 191 191 PRO PRO A . n A 1 42 LEU 42 192 192 LEU LEU A . n A 1 43 THR 43 193 193 THR THR A . n A 1 44 CYS 44 194 194 CYS CYS A . n A 1 45 ILE 45 195 195 ILE ILE A . n A 1 46 MET 46 196 196 MET MET A . n A 1 47 TYR 47 197 197 TYR TYR A . n A 1 48 ALA 48 198 198 ALA ALA A . n A 1 49 ILE 49 199 199 ILE ILE A . n A 1 50 PHE 50 200 200 PHE PHE A . n A 1 51 GLN 51 201 201 GLN GLN A . n A 1 52 GLU 52 202 202 GLU GLU A . n A 1 53 ARG 53 203 203 ARG ARG A . n A 1 54 ASP 54 204 204 ASP ASP A . n A 1 55 LEU 55 205 205 LEU LEU A . n A 1 56 LEU 56 206 206 LEU LEU A . n A 1 57 LYS 57 207 207 LYS LYS A . n A 1 58 THR 58 208 208 THR THR A . n A 1 59 PHE 59 209 209 PHE PHE A . n A 1 60 ARG 60 210 210 ARG ARG A . n A 1 61 ILE 61 211 211 ILE ILE A . n A 1 62 SER 62 212 212 SER SER A . n A 1 63 SER 63 213 213 SER SER A . n A 1 64 ASP 64 214 214 ASP ASP A . n A 1 65 THR 65 215 215 THR THR A . n A 1 66 PHE 66 216 216 PHE PHE A . n A 1 67 ILE 67 217 217 ILE ILE A . n A 1 68 THR 68 218 218 THR THR A . n A 1 69 TYR 69 219 219 TYR TYR A . n A 1 70 MET 70 220 220 MET MET A . n A 1 71 MET 71 221 221 MET MET A . n A 1 72 THR 72 222 222 THR THR A . n A 1 73 LEU 73 223 223 LEU LEU A . n A 1 74 GLU 74 224 224 GLU GLU A . n A 1 75 ASP 75 225 225 ASP ASP A . n A 1 76 HIS 76 226 226 HIS HIS A . n A 1 77 TYR 77 227 227 TYR TYR A . n A 1 78 HIS 78 228 228 HIS HIS A . n A 1 79 SER 79 229 229 SER SER A . n A 1 80 ASP 80 230 230 ASP ASP A . n A 1 81 VAL 81 231 231 VAL VAL A . n A 1 82 ALA 82 232 232 ALA ALA A . n A 1 83 TYR 83 233 233 TYR TYR A . n A 1 84 HIS 84 234 234 HIS HIS A . n A 1 85 ASN 85 235 235 ASN ASN A . n A 1 86 SER 86 236 236 SER SER A . n A 1 87 LEU 87 237 237 LEU LEU A . n A 1 88 HIS 88 238 238 HIS HIS A . n A 1 89 ALA 89 239 239 ALA ALA A . n A 1 90 ALA 90 240 240 ALA ALA A . n A 1 91 ASP 91 241 241 ASP ASP A . n A 1 92 VAL 92 242 242 VAL VAL A . n A 1 93 ALA 93 243 243 ALA ALA A . n A 1 94 GLN 94 244 244 GLN GLN A . n A 1 95 SER 95 245 245 SER SER A . n A 1 96 THR 96 246 246 THR THR A . n A 1 97 HIS 97 247 247 HIS HIS A . n A 1 98 VAL 98 248 248 VAL VAL A . n A 1 99 LEU 99 249 249 LEU LEU A . n A 1 100 LEU 100 250 250 LEU LEU A . n A 1 101 SER 101 251 251 SER SER A . n A 1 102 THR 102 252 252 THR THR A . n A 1 103 PRO 103 253 253 PRO PRO A . n A 1 104 ALA 104 254 254 ALA ALA A . n A 1 105 LEU 105 255 255 LEU LEU A . n A 1 106 ASP 106 256 256 ASP ASP A . n A 1 107 ALA 107 257 257 ALA ALA A . n A 1 108 VAL 108 258 258 VAL VAL A . n A 1 109 PHE 109 259 259 PHE PHE A . n A 1 110 THR 110 260 260 THR THR A . n A 1 111 ASP 111 261 261 ASP ASP A . n A 1 112 LEU 112 262 262 LEU LEU A . n A 1 113 GLU 113 263 263 GLU GLU A . n A 1 114 ILE 114 264 264 ILE ILE A . n A 1 115 LEU 115 265 265 LEU LEU A . n A 1 116 ALA 116 266 266 ALA ALA A . n A 1 117 ALA 117 267 267 ALA ALA A . n A 1 118 ILE 118 268 268 ILE ILE A . n A 1 119 PHE 119 269 269 PHE PHE A . n A 1 120 ALA 120 270 270 ALA ALA A . n A 1 121 ALA 121 271 271 ALA ALA A . n A 1 122 ALA 122 272 272 ALA ALA A . n A 1 123 ILE 123 273 273 ILE ILE A . n A 1 124 HIS 124 274 274 HIS HIS A . n A 1 125 ASP 125 275 275 ASP ASP A . n A 1 126 VAL 126 276 276 VAL VAL A . n A 1 127 ASP 127 277 277 ASP ASP A . n A 1 128 HIS 128 278 278 HIS HIS A . n A 1 129 PRO 129 279 279 PRO PRO A . n A 1 130 GLY 130 280 280 GLY GLY A . n A 1 131 VAL 131 281 281 VAL VAL A . n A 1 132 SER 132 282 282 SER SER A . n A 1 133 ASN 133 283 283 ASN ASN A . n A 1 134 GLN 134 284 284 GLN GLN A . n A 1 135 PHE 135 285 285 PHE PHE A . n A 1 136 LEU 136 286 286 LEU LEU A . n A 1 137 ILE 137 287 287 ILE ILE A . n A 1 138 ASN 138 288 288 ASN ASN A . n A 1 139 THR 139 289 289 THR THR A . n A 1 140 ASN 140 290 290 ASN ASN A . n A 1 141 SER 141 291 291 SER SER A . n A 1 142 GLU 142 292 292 GLU GLU A . n A 1 143 LEU 143 293 293 LEU LEU A . n A 1 144 ALA 144 294 294 ALA ALA A . n A 1 145 LEU 145 295 295 LEU LEU A . n A 1 146 MET 146 296 296 MET MET A . n A 1 147 TYR 147 297 297 TYR TYR A . n A 1 148 ASN 148 298 298 ASN ASN A . n A 1 149 ASP 149 299 299 ASP ASP A . n A 1 150 GLU 150 300 300 GLU GLU A . n A 1 151 SER 151 301 301 SER SER A . n A 1 152 VAL 152 302 302 VAL VAL A . n A 1 153 LEU 153 303 303 LEU LEU A . n A 1 154 GLU 154 304 304 GLU GLU A . n A 1 155 ASN 155 305 305 ASN ASN A . n A 1 156 HIS 156 306 306 HIS HIS A . n A 1 157 HIS 157 307 307 HIS HIS A . n A 1 158 LEU 158 308 308 LEU LEU A . n A 1 159 ALA 159 309 309 ALA ALA A . n A 1 160 VAL 160 310 310 VAL VAL A . n A 1 161 GLY 161 311 311 GLY GLY A . n A 1 162 PHE 162 312 312 PHE PHE A . n A 1 163 LYS 163 313 313 LYS LYS A . n A 1 164 LEU 164 314 314 LEU LEU A . n A 1 165 LEU 165 315 315 LEU LEU A . n A 1 166 GLN 166 316 316 GLN GLN A . n A 1 167 GLU 167 317 317 GLU GLU A . n A 1 168 GLU 168 318 318 GLU GLU A . n A 1 169 HIS 169 319 319 HIS HIS A . n A 1 170 CYS 170 320 320 CYS CYS A . n A 1 171 ASP 171 321 321 ASP ASP A . n A 1 172 ILE 172 322 322 ILE ILE A . n A 1 173 PHE 173 323 323 PHE PHE A . n A 1 174 MET 174 324 324 MET MET A . n A 1 175 ASN 175 325 325 ASN ASN A . n A 1 176 LEU 176 326 326 LEU LEU A . n A 1 177 THR 177 327 327 THR THR A . n A 1 178 LYS 178 328 328 LYS LYS A . n A 1 179 LYS 179 329 329 LYS LYS A . n A 1 180 GLN 180 330 330 GLN GLN A . n A 1 181 ARG 181 331 331 ARG ARG A . n A 1 182 GLN 182 332 332 GLN GLN A . n A 1 183 THR 183 333 333 THR THR A . n A 1 184 LEU 184 334 334 LEU LEU A . n A 1 185 ARG 185 335 335 ARG ARG A . n A 1 186 LYS 186 336 336 LYS LYS A . n A 1 187 MET 187 337 337 MET MET A . n A 1 188 VAL 188 338 338 VAL VAL A . n A 1 189 ILE 189 339 339 ILE ILE A . n A 1 190 ASP 190 340 340 ASP ASP A . n A 1 191 MET 191 341 341 MET MET A . n A 1 192 VAL 192 342 342 VAL VAL A . n A 1 193 LEU 193 343 343 LEU LEU A . n A 1 194 ALA 194 344 344 ALA ALA A . n A 1 195 THR 195 345 345 THR THR A . n A 1 196 ASP 196 346 346 ASP ASP A . n A 1 197 MET 197 347 347 MET MET A . n A 1 198 SER 198 348 348 SER SER A . n A 1 199 LYS 199 349 349 LYS LYS A . n A 1 200 HIS 200 350 350 HIS HIS A . n A 1 201 MET 201 351 351 MET MET A . n A 1 202 SER 202 352 352 SER SER A . n A 1 203 LEU 203 353 353 LEU LEU A . n A 1 204 LEU 204 354 354 LEU LEU A . n A 1 205 ALA 205 355 355 ALA ALA A . n A 1 206 ASP 206 356 356 ASP ASP A . n A 1 207 LEU 207 357 357 LEU LEU A . n A 1 208 LYS 208 358 358 LYS LYS A . n A 1 209 THR 209 359 359 THR THR A . n A 1 210 MET 210 360 360 MET MET A . n A 1 211 VAL 211 361 361 VAL VAL A . n A 1 212 GLU 212 362 362 GLU GLU A . n A 1 213 THR 213 363 363 THR THR A . n A 1 214 LYS 214 364 364 LYS LYS A . n A 1 215 LYS 215 365 365 LYS LYS A . n A 1 216 VAL 216 366 366 VAL VAL A . n A 1 217 THR 217 367 367 THR THR A . n A 1 218 SER 218 368 368 SER SER A . n A 1 219 SER 219 369 369 SER SER A . n A 1 220 GLY 220 370 370 GLY GLY A . n A 1 221 VAL 221 371 371 VAL VAL A . n A 1 222 LEU 222 372 372 LEU LEU A . n A 1 223 LEU 223 373 373 LEU LEU A . n A 1 224 LEU 224 374 374 LEU LEU A . n A 1 225 ASP 225 375 375 ASP ASP A . n A 1 226 ASN 226 376 376 ASN ASN A . n A 1 227 TYR 227 377 377 TYR TYR A . n A 1 228 THR 228 378 378 THR THR A . n A 1 229 ASP 229 379 379 ASP ASP A . n A 1 230 ARG 230 380 380 ARG ARG A . n A 1 231 ILE 231 381 381 ILE ILE A . n A 1 232 GLN 232 382 382 GLN GLN A . n A 1 233 VAL 233 383 383 VAL VAL A . n A 1 234 LEU 234 384 384 LEU LEU A . n A 1 235 ARG 235 385 385 ARG ARG A . n A 1 236 ASN 236 386 386 ASN ASN A . n A 1 237 MET 237 387 387 MET MET A . n A 1 238 VAL 238 388 388 VAL VAL A . n A 1 239 HIS 239 389 389 HIS HIS A . n A 1 240 CYS 240 390 390 CYS CYS A . n A 1 241 ALA 241 391 391 ALA ALA A . n A 1 242 ASP 242 392 392 ASP ASP A . n A 1 243 LEU 243 393 393 LEU LEU A . n A 1 244 SER 244 394 394 SER SER A . n A 1 245 ASN 245 395 395 ASN ASN A . n A 1 246 PRO 246 396 396 PRO PRO A . n A 1 247 THR 247 397 397 THR THR A . n A 1 248 LYS 248 398 398 LYS LYS A . n A 1 249 SER 249 399 399 SER SER A . n A 1 250 LEU 250 400 400 LEU LEU A . n A 1 251 GLU 251 401 401 GLU GLU A . n A 1 252 LEU 252 402 402 LEU LEU A . n A 1 253 TYR 253 403 403 TYR TYR A . n A 1 254 ARG 254 404 404 ARG ARG A . n A 1 255 GLN 255 405 405 GLN GLN A . n A 1 256 TRP 256 406 406 TRP TRP A . n A 1 257 THR 257 407 407 THR THR A . n A 1 258 ASP 258 408 408 ASP ASP A . n A 1 259 ARG 259 409 409 ARG ARG A . n A 1 260 ILE 260 410 410 ILE ILE A . n A 1 261 MET 261 411 411 MET MET A . n A 1 262 GLU 262 412 412 GLU GLU A . n A 1 263 GLU 263 413 413 GLU GLU A . n A 1 264 PHE 264 414 414 PHE PHE A . n A 1 265 PHE 265 415 415 PHE PHE A . n A 1 266 GLN 266 416 416 GLN GLN A . n A 1 267 GLN 267 417 417 GLN GLN A . n A 1 268 GLY 268 418 418 GLY GLY A . n A 1 269 ASP 269 419 419 ASP ASP A . n A 1 270 LYS 270 420 420 LYS LYS A . n A 1 271 GLU 271 421 421 GLU GLU A . n A 1 272 ARG 272 422 422 ARG ARG A . n A 1 273 GLU 273 423 423 GLU GLU A . n A 1 274 ARG 274 424 424 ARG ARG A . n A 1 275 GLY 275 425 425 GLY GLY A . n A 1 276 MET 276 426 426 MET MET A . n A 1 277 GLU 277 427 427 GLU GLU A . n A 1 278 ILE 278 428 428 ILE ILE A . n A 1 279 SER 279 429 429 SER SER A . n A 1 280 PRO 280 430 430 PRO PRO A . n A 1 281 MET 281 431 431 MET MET A . n A 1 282 CYS 282 432 432 CYS CYS A . n A 1 283 ASP 283 433 433 ASP ASP A . n A 1 284 LYS 284 434 434 LYS LYS A . n A 1 285 HIS 285 435 435 HIS HIS A . n A 1 286 THR 286 436 436 THR THR A . n A 1 287 ALA 287 437 437 ALA ALA A . n A 1 288 SER 288 438 438 SER SER A . n A 1 289 VAL 289 439 439 VAL VAL A . n A 1 290 GLU 290 440 440 GLU GLU A . n A 1 291 LYS 291 441 441 LYS LYS A . n A 1 292 SER 292 442 442 SER SER A . n A 1 293 GLN 293 443 443 GLN GLN A . n A 1 294 VAL 294 444 444 VAL VAL A . n A 1 295 GLY 295 445 445 GLY GLY A . n A 1 296 PHE 296 446 446 PHE PHE A . n A 1 297 ILE 297 447 447 ILE ILE A . n A 1 298 ASP 298 448 448 ASP ASP A . n A 1 299 TYR 299 449 449 TYR TYR A . n A 1 300 ILE 300 450 450 ILE ILE A . n A 1 301 VAL 301 451 451 VAL VAL A . n A 1 302 HIS 302 452 452 HIS HIS A . n A 1 303 PRO 303 453 453 PRO PRO A . n A 1 304 LEU 304 454 454 LEU LEU A . n A 1 305 TRP 305 455 455 TRP TRP A . n A 1 306 GLU 306 456 456 GLU GLU A . n A 1 307 THR 307 457 457 THR THR A . n A 1 308 TRP 308 458 458 TRP TRP A . n A 1 309 ALA 309 459 459 ALA ALA A . n A 1 310 ASP 310 460 460 ASP ASP A . n A 1 311 LEU 311 461 461 LEU LEU A . n A 1 312 VAL 312 462 462 VAL VAL A . n A 1 313 GLN 313 463 463 GLN GLN A . n A 1 314 PRO 314 464 464 PRO PRO A . n A 1 315 ASP 315 465 465 ASP ASP A . n A 1 316 ALA 316 466 466 ALA ALA A . n A 1 317 GLN 317 467 467 GLN GLN A . n A 1 318 ASP 318 468 468 ASP ASP A . n A 1 319 ILE 319 469 469 ILE ILE A . n A 1 320 LEU 320 470 470 LEU LEU A . n A 1 321 ASP 321 471 471 ASP ASP A . n A 1 322 THR 322 472 472 THR THR A . n A 1 323 LEU 323 473 473 LEU LEU A . n A 1 324 GLU 324 474 474 GLU GLU A . n A 1 325 ASP 325 475 475 ASP ASP A . n A 1 326 ASN 326 476 476 ASN ASN A . n A 1 327 ARG 327 477 477 ARG ARG A . n A 1 328 ASN 328 478 478 ASN ASN A . n A 1 329 TRP 329 479 479 TRP TRP A . n A 1 330 TYR 330 480 480 TYR TYR A . n A 1 331 GLN 331 481 481 GLN GLN A . n A 1 332 SER 332 482 482 SER SER A . n A 1 333 MET 333 483 483 MET MET A . n A 1 334 ILE 334 484 484 ILE ILE A . n A 1 335 PRO 335 485 485 PRO PRO A . n A 1 336 GLN 336 486 ? ? ? A . n A 1 337 SER 337 487 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 501 501 ZN ZN A . C 3 MG 1 502 502 MG MG A . D 3 MG 1 503 503 MG MG A . E 4 NPV 1 1 1 NPV NVP A . F 5 HOH 1 504 1 HOH TIP A . F 5 HOH 2 505 2 HOH TIP A . F 5 HOH 3 506 3 HOH TIP A . F 5 HOH 4 507 4 HOH TIP A . F 5 HOH 5 508 5 HOH TIP A . F 5 HOH 6 509 6 HOH TIP A . F 5 HOH 7 510 7 HOH TIP A . F 5 HOH 8 511 8 HOH TIP A . F 5 HOH 9 512 9 HOH TIP A . F 5 HOH 10 513 10 HOH TIP A . F 5 HOH 11 514 11 HOH TIP A . F 5 HOH 12 515 12 HOH TIP A . F 5 HOH 13 516 13 HOH TIP A . F 5 HOH 14 517 14 HOH TIP A . F 5 HOH 15 518 15 HOH TIP A . F 5 HOH 16 519 16 HOH TIP A . F 5 HOH 17 520 17 HOH TIP A . F 5 HOH 18 521 18 HOH TIP A . F 5 HOH 19 522 19 HOH TIP A . F 5 HOH 20 523 20 HOH TIP A . F 5 HOH 21 524 21 HOH TIP A . F 5 HOH 22 525 22 HOH TIP A . F 5 HOH 23 526 23 HOH TIP A . F 5 HOH 24 527 24 HOH TIP A . F 5 HOH 25 528 25 HOH TIP A . F 5 HOH 26 529 26 HOH TIP A . F 5 HOH 27 530 27 HOH TIP A . F 5 HOH 28 531 28 HOH TIP A . F 5 HOH 29 532 29 HOH TIP A . F 5 HOH 30 533 30 HOH TIP A . F 5 HOH 31 534 31 HOH TIP A . F 5 HOH 32 535 32 HOH TIP A . F 5 HOH 33 536 33 HOH TIP A . F 5 HOH 34 537 34 HOH TIP A . F 5 HOH 35 538 35 HOH TIP A . F 5 HOH 36 539 36 HOH TIP A . F 5 HOH 37 540 37 HOH TIP A . F 5 HOH 38 541 38 HOH TIP A . F 5 HOH 39 542 39 HOH TIP A . F 5 HOH 40 543 40 HOH TIP A . F 5 HOH 41 544 41 HOH TIP A . F 5 HOH 42 545 42 HOH TIP A . F 5 HOH 43 546 43 HOH TIP A . F 5 HOH 44 547 44 HOH TIP A . F 5 HOH 45 548 45 HOH TIP A . F 5 HOH 46 549 46 HOH TIP A . F 5 HOH 47 550 47 HOH TIP A . F 5 HOH 48 551 48 HOH TIP A . F 5 HOH 49 552 49 HOH TIP A . F 5 HOH 50 553 50 HOH TIP A . F 5 HOH 51 554 51 HOH TIP A . F 5 HOH 52 555 52 HOH TIP A . F 5 HOH 53 556 53 HOH TIP A . F 5 HOH 54 557 54 HOH TIP A . F 5 HOH 55 558 55 HOH TIP A . F 5 HOH 56 559 56 HOH TIP A . F 5 HOH 57 560 57 HOH TIP A . F 5 HOH 58 561 58 HOH TIP A . F 5 HOH 59 562 59 HOH TIP A . F 5 HOH 60 563 60 HOH TIP A . F 5 HOH 61 564 61 HOH TIP A . F 5 HOH 62 565 62 HOH TIP A . F 5 HOH 63 566 63 HOH TIP A . F 5 HOH 64 567 64 HOH TIP A . F 5 HOH 65 568 65 HOH TIP A . F 5 HOH 66 569 66 HOH TIP A . F 5 HOH 67 570 67 HOH TIP A . F 5 HOH 68 571 68 HOH TIP A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 CNS refinement 1.2 ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 # _cell.entry_id 2QYL _cell.length_a 91.758 _cell.length_b 105.353 _cell.length_c 87.827 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2QYL _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2QYL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.73 _exptl_crystal.density_percent_sol 54.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '12% PEG3350, 0.1M Tris HCl pH 8.5, 35% ethylene glycol, 200 mM MgCl2, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 277 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-01-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1 # _reflns.entry_id 2QYL _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.95 _reflns.d_resolution_low 30 _reflns.number_all ? _reflns.number_obs 28299 _reflns.percent_possible_obs 89.8 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 13.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.02 _reflns_shell.percent_possible_all 61.6 _reflns_shell.Rmerge_I_obs 0.32 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.0 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2QYL _refine.ls_d_res_high 1.95 _refine.ls_d_res_low 30 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27655 _refine.ls_number_reflns_R_free 2750 _refine.ls_percent_reflns_obs 88.2 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.213 _refine.ls_R_factor_R_free 0.239 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model PDE4B _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model isotropic _refine.B_iso_mean 42.9 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2706 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 2805 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.07 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 2QYL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2QYL _struct.title 'Crystal structure of PDE4B2B in complex with inhibitor NPV' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2QYL _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'PDE4B structure, selective inhibitor NVP, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5T3Z8_HUMAN _struct_ref.pdbx_db_accession Q5T3Z8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SISRFGVNTENEDHLAKELEDLNKWGLNIFNVAGYSHNRPLTCIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSDV AYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVG FKLLQEEHCDIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHCA DLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVQPDAQDILD TLEDNRNWYQSMIPQS ; _struct_ref.pdbx_align_begin 152 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2QYL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 337 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5T3Z8 _struct_ref_seq.db_align_beg 152 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 487 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 152 _struct_ref_seq.pdbx_auth_seq_align_end 487 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2QYL _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q5T3Z8 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 151 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'The asymmetric unit contains one catalytic domain of PDE4B2B' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 1 ? GLY A 7 ? MET A 151 GLY A 157 1 ? 7 HELX_P HELX_P2 2 ASN A 12 ? LEU A 20 ? ASN A 162 LEU A 170 1 ? 9 HELX_P HELX_P3 3 GLU A 21 ? LEU A 23 ? GLU A 171 LEU A 173 5 ? 3 HELX_P HELX_P4 4 ASN A 29 ? TYR A 36 ? ASN A 179 TYR A 186 1 ? 8 HELX_P HELX_P5 5 ARG A 40 ? ASP A 54 ? ARG A 190 ASP A 204 1 ? 15 HELX_P HELX_P6 6 ASP A 54 ? PHE A 59 ? ASP A 204 PHE A 209 1 ? 6 HELX_P HELX_P7 7 SER A 62 ? HIS A 76 ? SER A 212 HIS A 226 1 ? 15 HELX_P HELX_P8 8 ASN A 85 ? SER A 101 ? ASN A 235 SER A 251 1 ? 17 HELX_P HELX_P9 9 THR A 102 ? ASP A 106 ? THR A 252 ASP A 256 5 ? 5 HELX_P HELX_P10 10 THR A 110 ? HIS A 124 ? THR A 260 HIS A 274 1 ? 15 HELX_P HELX_P11 11 SER A 132 ? THR A 139 ? SER A 282 THR A 289 1 ? 8 HELX_P HELX_P12 12 SER A 141 ? TYR A 147 ? SER A 291 TYR A 297 1 ? 7 HELX_P HELX_P13 13 SER A 151 ? LEU A 165 ? SER A 301 LEU A 315 1 ? 15 HELX_P HELX_P14 14 THR A 177 ? ALA A 194 ? THR A 327 ALA A 344 1 ? 18 HELX_P HELX_P15 15 THR A 195 ? SER A 198 ? THR A 345 SER A 348 5 ? 4 HELX_P HELX_P16 16 LYS A 199 ? THR A 213 ? LYS A 349 THR A 363 1 ? 15 HELX_P HELX_P17 17 ASN A 226 ? LEU A 243 ? ASN A 376 LEU A 393 1 ? 18 HELX_P HELX_P18 18 SER A 244 ? LYS A 248 ? SER A 394 LYS A 398 5 ? 5 HELX_P HELX_P19 19 SER A 249 ? ARG A 274 ? SER A 399 ARG A 424 1 ? 26 HELX_P HELX_P20 20 SER A 288 ? ILE A 300 ? SER A 438 ILE A 450 1 ? 13 HELX_P HELX_P21 21 ILE A 300 ? VAL A 312 ? ILE A 450 VAL A 462 1 ? 13 HELX_P HELX_P22 22 ALA A 316 ? MET A 333 ? ALA A 466 MET A 483 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 78 NE2 ? ? ? 1_555 D MG . MG ? ? A HIS 228 A MG 503 1_555 ? ? ? ? ? ? ? 2.396 ? ? metalc2 metalc ? ? A HIS 88 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 238 A ZN 501 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc3 metalc ? ? A HIS 124 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 274 A ZN 501 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc4 metalc ? ? A ASP 125 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 275 A ZN 501 1_555 ? ? ? ? ? ? ? 2.263 ? ? metalc5 metalc ? ? A ASP 125 OD1 ? ? ? 1_555 C MG . MG ? ? A ASP 275 A MG 502 1_555 ? ? ? ? ? ? ? 2.194 ? ? metalc6 metalc ? ? A ASP 127 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 277 A MG 503 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc7 metalc ? ? A ASP 242 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 392 A ZN 501 1_555 ? ? ? ? ? ? ? 2.271 ? ? metalc8 metalc ? ? B ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 501 A HOH 504 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 502 A HOH 504 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 502 A HOH 506 1_555 ? ? ? ? ? ? ? 2.413 ? ? metalc11 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 502 A HOH 507 1_555 ? ? ? ? ? ? ? 2.435 ? ? metalc12 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 502 A HOH 508 1_555 ? ? ? ? ? ? ? 2.305 ? ? metalc13 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 502 A HOH 509 1_555 ? ? ? ? ? ? ? 2.406 ? ? metalc14 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 503 A HOH 513 1_555 ? ? ? ? ? ? ? 2.317 ? ? metalc15 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 503 A HOH 514 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc16 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 503 A HOH 515 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc17 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 503 A HOH 516 1_555 ? ? ? ? ? ? ? 2.321 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 78 ? A HIS 228 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 OD1 ? A ASP 127 ? A ASP 277 ? 1_555 88.5 ? 2 NE2 ? A HIS 78 ? A HIS 228 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 513 ? 1_555 79.7 ? 3 OD1 ? A ASP 127 ? A ASP 277 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 513 ? 1_555 167.6 ? 4 NE2 ? A HIS 78 ? A HIS 228 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 514 ? 1_555 172.1 ? 5 OD1 ? A ASP 127 ? A ASP 277 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 514 ? 1_555 87.8 ? 6 O ? F HOH . ? A HOH 513 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 514 ? 1_555 104.3 ? 7 NE2 ? A HIS 78 ? A HIS 228 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 515 ? 1_555 83.6 ? 8 OD1 ? A ASP 127 ? A ASP 277 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 515 ? 1_555 83.3 ? 9 O ? F HOH . ? A HOH 513 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 515 ? 1_555 91.6 ? 10 O ? F HOH . ? A HOH 514 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 515 ? 1_555 102.9 ? 11 NE2 ? A HIS 78 ? A HIS 228 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 85.3 ? 12 OD1 ? A ASP 127 ? A ASP 277 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 84.7 ? 13 O ? F HOH . ? A HOH 513 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 97.9 ? 14 O ? F HOH . ? A HOH 514 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 87.3 ? 15 O ? F HOH . ? A HOH 515 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 163.9 ? 16 NE2 ? A HIS 88 ? A HIS 238 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 124 ? A HIS 274 ? 1_555 88.7 ? 17 NE2 ? A HIS 88 ? A HIS 238 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 OD2 ? A ASP 125 ? A ASP 275 ? 1_555 86.3 ? 18 NE2 ? A HIS 124 ? A HIS 274 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 OD2 ? A ASP 125 ? A ASP 275 ? 1_555 87.2 ? 19 NE2 ? A HIS 88 ? A HIS 238 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 OD1 ? A ASP 242 ? A ASP 392 ? 1_555 86.2 ? 20 NE2 ? A HIS 124 ? A HIS 274 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 OD1 ? A ASP 242 ? A ASP 392 ? 1_555 88.5 ? 21 OD2 ? A ASP 125 ? A ASP 275 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 OD1 ? A ASP 242 ? A ASP 392 ? 1_555 171.5 ? 22 NE2 ? A HIS 88 ? A HIS 238 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 O ? F HOH . ? A HOH 504 ? 1_555 164.1 ? 23 NE2 ? A HIS 124 ? A HIS 274 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 O ? F HOH . ? A HOH 504 ? 1_555 104.6 ? 24 OD2 ? A ASP 125 ? A ASP 275 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 O ? F HOH . ? A HOH 504 ? 1_555 102.7 ? 25 OD1 ? A ASP 242 ? A ASP 392 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 O ? F HOH . ? A HOH 504 ? 1_555 85.6 ? 26 OD1 ? A ASP 125 ? A ASP 275 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 504 ? 1_555 109.5 ? 27 OD1 ? A ASP 125 ? A ASP 275 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 506 ? 1_555 163.2 ? 28 O ? F HOH . ? A HOH 504 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 506 ? 1_555 84.5 ? 29 OD1 ? A ASP 125 ? A ASP 275 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 507 ? 1_555 84.3 ? 30 O ? F HOH . ? A HOH 504 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 507 ? 1_555 166.0 ? 31 O ? F HOH . ? A HOH 506 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 507 ? 1_555 82.4 ? 32 OD1 ? A ASP 125 ? A ASP 275 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 508 ? 1_555 98.4 ? 33 O ? F HOH . ? A HOH 504 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 508 ? 1_555 93.7 ? 34 O ? F HOH . ? A HOH 506 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 508 ? 1_555 89.5 ? 35 O ? F HOH . ? A HOH 507 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 508 ? 1_555 81.4 ? 36 OD1 ? A ASP 125 ? A ASP 275 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 509 ? 1_555 80.7 ? 37 O ? F HOH . ? A HOH 504 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 509 ? 1_555 99.7 ? 38 O ? F HOH . ? A HOH 506 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 509 ? 1_555 88.0 ? 39 O ? F HOH . ? A HOH 507 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 509 ? 1_555 84.7 ? 40 O ? F HOH . ? A HOH 508 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? F HOH . ? A HOH 509 ? 1_555 166.1 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 313 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 463 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 314 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 464 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.04 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 6 'BINDING SITE FOR RESIDUE ZN A 501' AC2 Software A MG 502 ? 6 'BINDING SITE FOR RESIDUE MG A 502' AC3 Software A MG 503 ? 7 'BINDING SITE FOR RESIDUE MG A 503' AC4 Software A NPV 1 ? 10 'BINDING SITE FOR RESIDUE NPV A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 88 ? HIS A 238 . ? 1_555 ? 2 AC1 6 HIS A 124 ? HIS A 274 . ? 1_555 ? 3 AC1 6 ASP A 125 ? ASP A 275 . ? 1_555 ? 4 AC1 6 ASP A 242 ? ASP A 392 . ? 1_555 ? 5 AC1 6 HOH F . ? HOH A 504 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH A 505 . ? 1_555 ? 7 AC2 6 ASP A 125 ? ASP A 275 . ? 1_555 ? 8 AC2 6 HOH F . ? HOH A 504 . ? 1_555 ? 9 AC2 6 HOH F . ? HOH A 506 . ? 1_555 ? 10 AC2 6 HOH F . ? HOH A 507 . ? 1_555 ? 11 AC2 6 HOH F . ? HOH A 508 . ? 1_555 ? 12 AC2 6 HOH F . ? HOH A 509 . ? 1_555 ? 13 AC3 7 HIS A 78 ? HIS A 228 . ? 1_555 ? 14 AC3 7 ASP A 127 ? ASP A 277 . ? 1_555 ? 15 AC3 7 ASN A 140 ? ASN A 290 . ? 3_654 ? 16 AC3 7 HOH F . ? HOH A 513 . ? 1_555 ? 17 AC3 7 HOH F . ? HOH A 514 . ? 1_555 ? 18 AC3 7 HOH F . ? HOH A 515 . ? 1_555 ? 19 AC3 7 HOH F . ? HOH A 516 . ? 1_555 ? 20 AC4 10 MET A 197 ? MET A 347 . ? 1_555 ? 21 AC4 10 ASN A 245 ? ASN A 395 . ? 1_555 ? 22 AC4 10 ILE A 260 ? ILE A 410 . ? 1_555 ? 23 AC4 10 PHE A 264 ? PHE A 414 . ? 1_555 ? 24 AC4 10 MET A 281 ? MET A 431 . ? 1_555 ? 25 AC4 10 GLN A 293 ? GLN A 443 . ? 1_555 ? 26 AC4 10 PHE A 296 ? PHE A 446 . ? 1_555 ? 27 AC4 10 HOH F . ? HOH A 508 . ? 1_555 ? 28 AC4 10 HOH F . ? HOH A 549 . ? 1_555 ? 29 AC4 10 HOH F . ? HOH A 562 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 257 ? ? 59.24 13.32 2 1 LEU A 393 ? ? -108.64 40.43 3 1 MET A 431 ? ? 82.75 -17.24 4 1 THR A 436 ? ? -142.38 11.80 5 1 ILE A 450 ? ? -122.15 -57.53 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 486 ? A GLN 336 2 1 Y 1 A SER 487 ? A SER 337 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 MG MG MG N N 250 NPV C4 C Y N 251 NPV C5 C Y N 252 NPV C6 C Y N 253 NPV C7 C Y N 254 NPV C9 C Y N 255 NPV C10 C Y N 256 NPV C15 C Y N 257 NPV C11 C Y N 258 NPV C12 C Y N 259 NPV C13 C Y N 260 NPV C3 C N N 261 NPV O1 O N N 262 NPV O2 O N N 263 NPV C8 C Y N 264 NPV N19 N Y N 265 NPV C14 C Y N 266 NPV N16 N Y N 267 NPV C17 C Y N 268 NPV C18 C Y N 269 NPV C20 C Y N 270 NPV C25 C Y N 271 NPV C21 C Y N 272 NPV C22 C Y N 273 NPV C23 C Y N 274 NPV C24 C Y N 275 NPV N26 N N N 276 NPV O27 O N N 277 NPV O28 O N N 278 NPV H5 H N N 279 NPV H6 H N N 280 NPV H9 H N N 281 NPV H15 H N N 282 NPV H11 H N N 283 NPV H13 H N N 284 NPV HO2 H N N 285 NPV H8 H N N 286 NPV H14 H N N 287 NPV H25 H N N 288 NPV H21 H N N 289 NPV H22 H N N 290 NPV H23 H N N 291 PHE N N N N 292 PHE CA C N S 293 PHE C C N N 294 PHE O O N N 295 PHE CB C N N 296 PHE CG C Y N 297 PHE CD1 C Y N 298 PHE CD2 C Y N 299 PHE CE1 C Y N 300 PHE CE2 C Y N 301 PHE CZ C Y N 302 PHE OXT O N N 303 PHE H H N N 304 PHE H2 H N N 305 PHE HA H N N 306 PHE HB2 H N N 307 PHE HB3 H N N 308 PHE HD1 H N N 309 PHE HD2 H N N 310 PHE HE1 H N N 311 PHE HE2 H N N 312 PHE HZ H N N 313 PHE HXT H N N 314 PRO N N N N 315 PRO CA C N S 316 PRO C C N N 317 PRO O O N N 318 PRO CB C N N 319 PRO CG C N N 320 PRO CD C N N 321 PRO OXT O N N 322 PRO H H N N 323 PRO HA H N N 324 PRO HB2 H N N 325 PRO HB3 H N N 326 PRO HG2 H N N 327 PRO HG3 H N N 328 PRO HD2 H N N 329 PRO HD3 H N N 330 PRO HXT H N N 331 SER N N N N 332 SER CA C N S 333 SER C C N N 334 SER O O N N 335 SER CB C N N 336 SER OG O N N 337 SER OXT O N N 338 SER H H N N 339 SER H2 H N N 340 SER HA H N N 341 SER HB2 H N N 342 SER HB3 H N N 343 SER HG H N N 344 SER HXT H N N 345 THR N N N N 346 THR CA C N S 347 THR C C N N 348 THR O O N N 349 THR CB C N R 350 THR OG1 O N N 351 THR CG2 C N N 352 THR OXT O N N 353 THR H H N N 354 THR H2 H N N 355 THR HA H N N 356 THR HB H N N 357 THR HG1 H N N 358 THR HG21 H N N 359 THR HG22 H N N 360 THR HG23 H N N 361 THR HXT H N N 362 TRP N N N N 363 TRP CA C N S 364 TRP C C N N 365 TRP O O N N 366 TRP CB C N N 367 TRP CG C Y N 368 TRP CD1 C Y N 369 TRP CD2 C Y N 370 TRP NE1 N Y N 371 TRP CE2 C Y N 372 TRP CE3 C Y N 373 TRP CZ2 C Y N 374 TRP CZ3 C Y N 375 TRP CH2 C Y N 376 TRP OXT O N N 377 TRP H H N N 378 TRP H2 H N N 379 TRP HA H N N 380 TRP HB2 H N N 381 TRP HB3 H N N 382 TRP HD1 H N N 383 TRP HE1 H N N 384 TRP HE3 H N N 385 TRP HZ2 H N N 386 TRP HZ3 H N N 387 TRP HH2 H N N 388 TRP HXT H N N 389 TYR N N N N 390 TYR CA C N S 391 TYR C C N N 392 TYR O O N N 393 TYR CB C N N 394 TYR CG C Y N 395 TYR CD1 C Y N 396 TYR CD2 C Y N 397 TYR CE1 C Y N 398 TYR CE2 C Y N 399 TYR CZ C Y N 400 TYR OH O N N 401 TYR OXT O N N 402 TYR H H N N 403 TYR H2 H N N 404 TYR HA H N N 405 TYR HB2 H N N 406 TYR HB3 H N N 407 TYR HD1 H N N 408 TYR HD2 H N N 409 TYR HE1 H N N 410 TYR HE2 H N N 411 TYR HH H N N 412 TYR HXT H N N 413 VAL N N N N 414 VAL CA C N S 415 VAL C C N N 416 VAL O O N N 417 VAL CB C N N 418 VAL CG1 C N N 419 VAL CG2 C N N 420 VAL OXT O N N 421 VAL H H N N 422 VAL H2 H N N 423 VAL HA H N N 424 VAL HB H N N 425 VAL HG11 H N N 426 VAL HG12 H N N 427 VAL HG13 H N N 428 VAL HG21 H N N 429 VAL HG22 H N N 430 VAL HG23 H N N 431 VAL HXT H N N 432 ZN ZN ZN N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NPV O1 C3 doub N N 237 NPV O2 C3 sing N N 238 NPV C3 C4 sing N N 239 NPV C4 C5 doub Y N 240 NPV C4 C9 sing Y N 241 NPV C5 C6 sing Y N 242 NPV C9 C8 doub Y N 243 NPV C6 C7 doub Y N 244 NPV C8 C7 sing Y N 245 NPV C7 C10 sing Y N 246 NPV O28 N26 sing N N 247 NPV C10 N19 doub Y N 248 NPV C10 C11 sing Y N 249 NPV N19 C18 sing Y N 250 NPV N26 O27 doub N N 251 NPV N26 C24 sing N N 252 NPV C11 C12 doub Y N 253 NPV C25 C24 doub Y N 254 NPV C25 C20 sing Y N 255 NPV C24 C23 sing Y N 256 NPV C18 C20 sing Y N 257 NPV C18 C17 doub Y N 258 NPV C12 C17 sing Y N 259 NPV C12 C13 sing Y N 260 NPV C20 C21 doub Y N 261 NPV C17 N16 sing Y N 262 NPV C13 C14 doub Y N 263 NPV C23 C22 doub Y N 264 NPV C21 C22 sing Y N 265 NPV N16 C15 doub Y N 266 NPV C14 C15 sing Y N 267 NPV C5 H5 sing N N 268 NPV C6 H6 sing N N 269 NPV C9 H9 sing N N 270 NPV C15 H15 sing N N 271 NPV C11 H11 sing N N 272 NPV C13 H13 sing N N 273 NPV O2 HO2 sing N N 274 NPV C8 H8 sing N N 275 NPV C14 H14 sing N N 276 NPV C25 H25 sing N N 277 NPV C21 H21 sing N N 278 NPV C22 H22 sing N N 279 NPV C23 H23 sing N N 280 PHE N CA sing N N 281 PHE N H sing N N 282 PHE N H2 sing N N 283 PHE CA C sing N N 284 PHE CA CB sing N N 285 PHE CA HA sing N N 286 PHE C O doub N N 287 PHE C OXT sing N N 288 PHE CB CG sing N N 289 PHE CB HB2 sing N N 290 PHE CB HB3 sing N N 291 PHE CG CD1 doub Y N 292 PHE CG CD2 sing Y N 293 PHE CD1 CE1 sing Y N 294 PHE CD1 HD1 sing N N 295 PHE CD2 CE2 doub Y N 296 PHE CD2 HD2 sing N N 297 PHE CE1 CZ doub Y N 298 PHE CE1 HE1 sing N N 299 PHE CE2 CZ sing Y N 300 PHE CE2 HE2 sing N N 301 PHE CZ HZ sing N N 302 PHE OXT HXT sing N N 303 PRO N CA sing N N 304 PRO N CD sing N N 305 PRO N H sing N N 306 PRO CA C sing N N 307 PRO CA CB sing N N 308 PRO CA HA sing N N 309 PRO C O doub N N 310 PRO C OXT sing N N 311 PRO CB CG sing N N 312 PRO CB HB2 sing N N 313 PRO CB HB3 sing N N 314 PRO CG CD sing N N 315 PRO CG HG2 sing N N 316 PRO CG HG3 sing N N 317 PRO CD HD2 sing N N 318 PRO CD HD3 sing N N 319 PRO OXT HXT sing N N 320 SER N CA sing N N 321 SER N H sing N N 322 SER N H2 sing N N 323 SER CA C sing N N 324 SER CA CB sing N N 325 SER CA HA sing N N 326 SER C O doub N N 327 SER C OXT sing N N 328 SER CB OG sing N N 329 SER CB HB2 sing N N 330 SER CB HB3 sing N N 331 SER OG HG sing N N 332 SER OXT HXT sing N N 333 THR N CA sing N N 334 THR N H sing N N 335 THR N H2 sing N N 336 THR CA C sing N N 337 THR CA CB sing N N 338 THR CA HA sing N N 339 THR C O doub N N 340 THR C OXT sing N N 341 THR CB OG1 sing N N 342 THR CB CG2 sing N N 343 THR CB HB sing N N 344 THR OG1 HG1 sing N N 345 THR CG2 HG21 sing N N 346 THR CG2 HG22 sing N N 347 THR CG2 HG23 sing N N 348 THR OXT HXT sing N N 349 TRP N CA sing N N 350 TRP N H sing N N 351 TRP N H2 sing N N 352 TRP CA C sing N N 353 TRP CA CB sing N N 354 TRP CA HA sing N N 355 TRP C O doub N N 356 TRP C OXT sing N N 357 TRP CB CG sing N N 358 TRP CB HB2 sing N N 359 TRP CB HB3 sing N N 360 TRP CG CD1 doub Y N 361 TRP CG CD2 sing Y N 362 TRP CD1 NE1 sing Y N 363 TRP CD1 HD1 sing N N 364 TRP CD2 CE2 doub Y N 365 TRP CD2 CE3 sing Y N 366 TRP NE1 CE2 sing Y N 367 TRP NE1 HE1 sing N N 368 TRP CE2 CZ2 sing Y N 369 TRP CE3 CZ3 doub Y N 370 TRP CE3 HE3 sing N N 371 TRP CZ2 CH2 doub Y N 372 TRP CZ2 HZ2 sing N N 373 TRP CZ3 CH2 sing Y N 374 TRP CZ3 HZ3 sing N N 375 TRP CH2 HH2 sing N N 376 TRP OXT HXT sing N N 377 TYR N CA sing N N 378 TYR N H sing N N 379 TYR N H2 sing N N 380 TYR CA C sing N N 381 TYR CA CB sing N N 382 TYR CA HA sing N N 383 TYR C O doub N N 384 TYR C OXT sing N N 385 TYR CB CG sing N N 386 TYR CB HB2 sing N N 387 TYR CB HB3 sing N N 388 TYR CG CD1 doub Y N 389 TYR CG CD2 sing Y N 390 TYR CD1 CE1 sing Y N 391 TYR CD1 HD1 sing N N 392 TYR CD2 CE2 doub Y N 393 TYR CD2 HD2 sing N N 394 TYR CE1 CZ doub Y N 395 TYR CE1 HE1 sing N N 396 TYR CE2 CZ sing Y N 397 TYR CE2 HE2 sing N N 398 TYR CZ OH sing N N 399 TYR OH HH sing N N 400 TYR OXT HXT sing N N 401 VAL N CA sing N N 402 VAL N H sing N N 403 VAL N H2 sing N N 404 VAL CA C sing N N 405 VAL CA CB sing N N 406 VAL CA HA sing N N 407 VAL C O doub N N 408 VAL C OXT sing N N 409 VAL CB CG1 sing N N 410 VAL CB CG2 sing N N 411 VAL CB HB sing N N 412 VAL CG1 HG11 sing N N 413 VAL CG1 HG12 sing N N 414 VAL CG1 HG13 sing N N 415 VAL CG2 HG21 sing N N 416 VAL CG2 HG22 sing N N 417 VAL CG2 HG23 sing N N 418 VAL OXT HXT sing N N 419 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'PDE4B structure' # _atom_sites.entry_id 2QYL _atom_sites.fract_transf_matrix[1][1] 0.010898 _atom_sites.fract_transf_matrix[1][2] -0.000000 _atom_sites.fract_transf_matrix[1][3] -0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009492 _atom_sites.fract_transf_matrix[2][3] -0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011386 _atom_sites.fract_transf_vector[1] -0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] -0.00000 # loop_ _atom_type.symbol C MG N O S ZN # loop_