data_2R1G # _entry.id 2R1G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2R1G pdb_00002r1g 10.2210/pdb2r1g/pdb RCSB RCSB044306 ? ? WWPDB D_1000044306 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-03-18 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-12-18 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Source and taxonomy' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' em_software 3 3 'Structure model' pdbx_entity_src_syn 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' em_3d_fitting_list 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_em_software.image_processing_id' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_em_3d_fitting_list.accession_code' 5 4 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 6 4 'Structure model' '_em_3d_fitting_list.source_name' 7 4 'Structure model' '_em_3d_fitting_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2R1G _pdbx_database_status.recvd_initial_deposition_date 2007-08-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1J5E '30S X-RAY CRYSTALLOGRAPHIC STRUCTURE' unspecified PDB 2R1C 'RbfA HOMOLOGY MODEL FITTED INTO 30S-RbfA CRYO-EM MAP' unspecified PDB 2DYJ 'RbfA X-RAY CRYSTALLOGRAPHIC STRUCTURE' unspecified EMDB EMD-1413 . 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Datta, P.P.' 1 'Wilson, D.N.' 2 'Kawazoe, M.' 3 'Swami, N.K.' 4 'Kaminishi, T.' 5 'Sharma, M.R.' 6 'Booth, T.M.' 7 'Takemoto, C.' 8 'Fucini, P.' 9 'Yokoyama, S.' 10 'Agrawal, R.K.' 11 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural aspects of RbfA action during small ribosomal subunit assembly.' Mol.Cell 28 434 445 2007 MOCEFL US 1097-2765 2168 ? 17996707 10.1016/j.molcel.2007.08.026 1 'Structure of the 30S ribosomal subunit' Nature 407 327 339 2000 NATUAS UK 0028-0836 0006 ? 11014170 10.1038/35030006 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Datta, P.P.' 1 ? primary 'Wilson, D.N.' 2 ? primary 'Kawazoe, M.' 3 ? primary 'Swami, N.K.' 4 ? primary 'Kaminishi, T.' 5 ? primary 'Sharma, M.R.' 6 ? primary 'Booth, T.M.' 7 ? primary 'Takemoto, C.' 8 ? primary 'Fucini, P.' 9 ? primary 'Yokoyama, S.' 10 ? primary 'Agrawal, R.K.' 11 ? 1 'Wimberly, B.T.' 12 ? 1 'Brodersen, D.E.' 13 ? 1 'Clemons, W.M.' 14 ? 1 'Morgan-Warren, R.J.' 15 ? 1 'Carter, A.P.' 16 ? 1 'Vonrhein, C.' 17 ? 1 'Hartsch, T.' 18 ? 1 'Ramakrishnan, V.' 19 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn '16S RIBOSOMAL RNA HELIX 1' 7781.646 1 ? ? ? ? 2 polymer syn '16S RIBOSOMAL RNA HELIX 18' 15544.350 1 ? ? ? ? 3 polymer syn '16S RIBOSOMAL RNA HELIX 27' 9440.723 1 ? ? ? ? 4 polymer syn '16S RIBOSOMAL RNA HELIX 28' 8969.390 1 ? ? ? ? 5 polymer syn '16S RIBOSOMAL RNA HELIX 44' 3457.122 1 ? ? ? ? 6 polymer syn '16S RIBOSOMAL RNA HELIX 44' 3530.178 1 ? ? ? ? 7 polymer syn '16S RIBOSOMAL RNA HELIX 45' 9434.667 1 ? ? ? ? 8 polymer man '30S ribosomal protein S9' 14298.466 1 ? ? ? ? 9 polymer man '30S ribosomal protein S12' 13804.311 1 ? ? 'residues 5-128' ? 10 polymer man '30S ribosomal protein S13' 14207.666 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGAGAGUUUGAUCCUGGCUCAGGG GGAGAGUUUGAUCCUGGCUCAGGG A ? 2 polyribonucleotide no no GCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGA GCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGA B ? 3 polyribonucleotide no no GGGGAGUACGGCCGCAAGGCUGAAACUCA GGGGAGUACGGCCGCAAGGCUGAAACUCA C ? 4 polyribonucleotide no no AAUUGACGGGGGCCGCCUUGUACACACC AAUUGACGGGGGCCGCCUUGUACACACC D ? 5 polyribonucleotide no no CGCCCGUCACG CGCCCGUCACG E ? 6 polyribonucleotide no no CGAAGUCGUAA CGAAGUCGUAA X ? 7 polyribonucleotide no no CAAGGUAGCUGUACCGGAAGGUGCGGCUG CAAGGUAGCUGUACCGGAAGGUGCGGCUG F ? 8 'polypeptide(L)' no no ;EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGI ARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR ; ;EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGI ARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR ; G ? 9 'polypeptide(L)' no no ;PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVL IRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA ; ;PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVL IRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA ; H ? 10 'polypeptide(L)' no no ;ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRL MDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK ; ;ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRL MDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK ; I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 G n 1 5 A n 1 6 G n 1 7 U n 1 8 U n 1 9 U n 1 10 G n 1 11 A n 1 12 U n 1 13 C n 1 14 C n 1 15 U n 1 16 G n 1 17 G n 1 18 C n 1 19 U n 1 20 C n 1 21 A n 1 22 G n 1 23 G n 1 24 G n 2 1 G n 2 2 C n 2 3 G n 2 4 C n 2 5 C n 2 6 G n 2 7 G n 2 8 C n 2 9 C n 2 10 A n 2 11 A n 2 12 C n 2 13 U n 2 14 C n 2 15 C n 2 16 G n 2 17 U n 2 18 G n 2 19 C n 2 20 C n 2 21 A n 2 22 G n 2 23 C n 2 24 A n 2 25 G n 2 26 C n 2 27 C n 2 28 G n 2 29 C n 2 30 G n 2 31 G n 2 32 U n 2 33 A n 2 34 A n 2 35 U n 2 36 A n 2 37 C n 2 38 G n 2 39 G n 2 40 A n 2 41 G n 2 42 G n 2 43 G n 2 44 C n 2 45 G n 2 46 C n 2 47 G n 2 48 A n 3 1 G n 3 2 G n 3 3 G n 3 4 G n 3 5 A n 3 6 G n 3 7 U n 3 8 A n 3 9 C n 3 10 G n 3 11 G n 3 12 C n 3 13 C n 3 14 G n 3 15 C n 3 16 A n 3 17 A n 3 18 G n 3 19 G n 3 20 C n 3 21 U n 3 22 G n 3 23 A n 3 24 A n 3 25 A n 3 26 C n 3 27 U n 3 28 C n 3 29 A n 4 1 A n 4 2 A n 4 3 U n 4 4 U n 4 5 G n 4 6 A n 4 7 C n 4 8 G n 4 9 G n 4 10 G n 4 11 G n 4 12 G n 4 13 C n 4 14 C n 4 15 G n 4 16 C n 4 17 C n 4 18 U n 4 19 U n 4 20 G n 4 21 U n 4 22 A n 4 23 C n 4 24 A n 4 25 C n 4 26 A n 4 27 C n 4 28 C n 5 1 C n 5 2 G n 5 3 C n 5 4 C n 5 5 C n 5 6 G n 5 7 U n 5 8 C n 5 9 A n 5 10 C n 5 11 G n 6 1 C n 6 2 G n 6 3 A n 6 4 A n 6 5 G n 6 6 U n 6 7 C n 6 8 G n 6 9 U n 6 10 A n 6 11 A n 7 1 C n 7 2 A n 7 3 A n 7 4 G n 7 5 G n 7 6 U n 7 7 A n 7 8 G n 7 9 C n 7 10 U n 7 11 G n 7 12 U n 7 13 A n 7 14 C n 7 15 C n 7 16 G n 7 17 G n 7 18 A n 7 19 A n 7 20 G n 7 21 G n 7 22 U n 7 23 G n 7 24 C n 7 25 G n 7 26 G n 7 27 C n 7 28 U n 7 29 G n 8 1 GLU n 8 2 GLN n 8 3 TYR n 8 4 TYR n 8 5 GLY n 8 6 THR n 8 7 GLY n 8 8 ARG n 8 9 ARG n 8 10 LYS n 8 11 GLU n 8 12 ALA n 8 13 VAL n 8 14 ALA n 8 15 ARG n 8 16 VAL n 8 17 PHE n 8 18 LEU n 8 19 ARG n 8 20 PRO n 8 21 GLY n 8 22 ASN n 8 23 GLY n 8 24 LYS n 8 25 VAL n 8 26 THR n 8 27 VAL n 8 28 ASN n 8 29 GLY n 8 30 GLN n 8 31 ASP n 8 32 PHE n 8 33 ASN n 8 34 GLU n 8 35 TYR n 8 36 PHE n 8 37 GLN n 8 38 GLY n 8 39 LEU n 8 40 VAL n 8 41 ARG n 8 42 ALA n 8 43 VAL n 8 44 ALA n 8 45 ALA n 8 46 LEU n 8 47 GLU n 8 48 PRO n 8 49 LEU n 8 50 ARG n 8 51 ALA n 8 52 VAL n 8 53 ASP n 8 54 ALA n 8 55 LEU n 8 56 GLY n 8 57 ARG n 8 58 PHE n 8 59 ASP n 8 60 ALA n 8 61 TYR n 8 62 ILE n 8 63 THR n 8 64 VAL n 8 65 ARG n 8 66 GLY n 8 67 GLY n 8 68 GLY n 8 69 LYS n 8 70 SER n 8 71 GLY n 8 72 GLN n 8 73 ILE n 8 74 ASP n 8 75 ALA n 8 76 ILE n 8 77 LYS n 8 78 LEU n 8 79 GLY n 8 80 ILE n 8 81 ALA n 8 82 ARG n 8 83 ALA n 8 84 LEU n 8 85 VAL n 8 86 GLN n 8 87 TYR n 8 88 ASN n 8 89 PRO n 8 90 ASP n 8 91 TYR n 8 92 ARG n 8 93 ALA n 8 94 LYS n 8 95 LEU n 8 96 LYS n 8 97 PRO n 8 98 LEU n 8 99 GLY n 8 100 PHE n 8 101 LEU n 8 102 THR n 8 103 ARG n 8 104 ASP n 8 105 ALA n 8 106 ARG n 8 107 VAL n 8 108 VAL n 8 109 GLU n 8 110 ARG n 8 111 LYS n 8 112 LYS n 8 113 TYR n 8 114 GLY n 8 115 LYS n 8 116 HIS n 8 117 LYS n 8 118 ALA n 8 119 ARG n 8 120 ARG n 8 121 ALA n 8 122 PRO n 8 123 GLN n 8 124 TYR n 8 125 SER n 8 126 LYS n 8 127 ARG n 9 1 PRO n 9 2 THR n 9 3 ILE n 9 4 ASN n 9 5 GLN n 9 6 LEU n 9 7 VAL n 9 8 ARG n 9 9 LYS n 9 10 GLY n 9 11 ARG n 9 12 GLU n 9 13 LYS n 9 14 VAL n 9 15 ARG n 9 16 LYS n 9 17 LYS n 9 18 SER n 9 19 LYS n 9 20 VAL n 9 21 PRO n 9 22 ALA n 9 23 LEU n 9 24 LYS n 9 25 GLY n 9 26 ALA n 9 27 PRO n 9 28 PHE n 9 29 ARG n 9 30 ARG n 9 31 GLY n 9 32 VAL n 9 33 CYS n 9 34 THR n 9 35 VAL n 9 36 VAL n 9 37 ARG n 9 38 THR n 9 39 VAL n 9 40 THR n 9 41 PRO n 9 42 LYS n 9 43 LYS n 9 44 PRO n 9 45 ASN n 9 46 SER n 9 47 ALA n 9 48 LEU n 9 49 ARG n 9 50 LYS n 9 51 VAL n 9 52 ALA n 9 53 LYS n 9 54 VAL n 9 55 ARG n 9 56 LEU n 9 57 THR n 9 58 SER n 9 59 GLY n 9 60 TYR n 9 61 GLU n 9 62 VAL n 9 63 THR n 9 64 ALA n 9 65 TYR n 9 66 ILE n 9 67 PRO n 9 68 GLY n 9 69 GLU n 9 70 GLY n 9 71 HIS n 9 72 ASN n 9 73 LEU n 9 74 GLN n 9 75 GLU n 9 76 HIS n 9 77 SER n 9 78 VAL n 9 79 VAL n 9 80 LEU n 9 81 ILE n 9 82 ARG n 9 83 GLY n 9 84 GLY n 9 85 ARG n 9 86 VAL n 9 87 LYS n 9 88 ASP n 9 89 LEU n 9 90 PRO n 9 91 GLY n 9 92 VAL n 9 93 ARG n 9 94 TYR n 9 95 HIS n 9 96 ILE n 9 97 VAL n 9 98 ARG n 9 99 GLY n 9 100 VAL n 9 101 TYR n 9 102 ASP n 9 103 ALA n 9 104 ALA n 9 105 GLY n 9 106 VAL n 9 107 LYS n 9 108 ASP n 9 109 ARG n 9 110 LYS n 9 111 LYS n 9 112 SER n 9 113 ARG n 9 114 SER n 9 115 LYS n 9 116 TYR n 9 117 GLY n 9 118 THR n 9 119 LYS n 9 120 LYS n 9 121 PRO n 9 122 LYS n 9 123 GLU n 9 124 ALA n 10 1 ALA n 10 2 ARG n 10 3 ILE n 10 4 ALA n 10 5 GLY n 10 6 VAL n 10 7 GLU n 10 8 ILE n 10 9 PRO n 10 10 ARG n 10 11 ASN n 10 12 LYS n 10 13 ARG n 10 14 VAL n 10 15 ASP n 10 16 VAL n 10 17 ALA n 10 18 LEU n 10 19 THR n 10 20 TYR n 10 21 ILE n 10 22 TYR n 10 23 GLY n 10 24 ILE n 10 25 GLY n 10 26 LYS n 10 27 ALA n 10 28 ARG n 10 29 ALA n 10 30 LYS n 10 31 GLU n 10 32 ALA n 10 33 LEU n 10 34 GLU n 10 35 LYS n 10 36 THR n 10 37 GLY n 10 38 ILE n 10 39 ASN n 10 40 PRO n 10 41 ALA n 10 42 THR n 10 43 ARG n 10 44 VAL n 10 45 LYS n 10 46 ASP n 10 47 LEU n 10 48 THR n 10 49 GLU n 10 50 ALA n 10 51 GLU n 10 52 VAL n 10 53 VAL n 10 54 ARG n 10 55 LEU n 10 56 ARG n 10 57 GLU n 10 58 TYR n 10 59 VAL n 10 60 GLU n 10 61 ASN n 10 62 THR n 10 63 TRP n 10 64 LYS n 10 65 LEU n 10 66 GLU n 10 67 GLY n 10 68 GLU n 10 69 LEU n 10 70 ARG n 10 71 ALA n 10 72 GLU n 10 73 VAL n 10 74 ALA n 10 75 ALA n 10 76 ASN n 10 77 ILE n 10 78 LYS n 10 79 ARG n 10 80 LEU n 10 81 MET n 10 82 ASP n 10 83 ILE n 10 84 GLY n 10 85 CYS n 10 86 TYR n 10 87 ARG n 10 88 GLY n 10 89 LEU n 10 90 ARG n 10 91 HIS n 10 92 ARG n 10 93 ARG n 10 94 GLY n 10 95 LEU n 10 96 PRO n 10 97 VAL n 10 98 ARG n 10 99 GLY n 10 100 GLN n 10 101 ARG n 10 102 THR n 10 103 ARG n 10 104 THR n 10 105 ASN n 10 106 ALA n 10 107 ARG n 10 108 THR n 10 109 ARG n 10 110 LYS n 10 111 GLY n 10 112 PRO n 10 113 ARG n 10 114 LYS n 10 115 THR n 10 116 VAL n 10 117 ALA n 10 118 GLY n 10 119 LYS n 10 120 LYS n 10 121 LYS n 10 122 ALA n 10 123 PRO n 10 124 ARG n 10 125 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 8 1 sample ? ? ? ? Thermus 'rpsI, rps9' 'Thermus thermophilus' HB27 ? ? ? ? 'Thermus thermophilus' 262724 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 9 1 sample ? ? ? ? Thermus 'rpsL, rps12' 'Thermus thermophilus' HB27 ? ? ? ? 'Thermus thermophilus' 262724 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 10 1 sample ? ? ? ? Thermus 'rpsM, rps13' 'Thermus thermophilus' HB27 ? ? ? ? 'Thermus thermophilus' 262724 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'synthetic construct' ? 32630 ? 2 1 sample ? ? 'synthetic construct' ? 32630 ? 3 1 sample ? ? 'synthetic construct' ? 32630 ? 4 1 sample ? ? 'synthetic construct' ? 32630 ? 5 1 sample ? ? 'synthetic construct' ? 32630 ? 6 1 sample ? ? 'synthetic construct' ? 32630 ? 7 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 6 6 G G A . n A 1 2 G 2 7 7 G G A . n A 1 3 A 3 8 8 A A A . n A 1 4 G 4 9 9 G G A . n A 1 5 A 5 10 10 A A A . n A 1 6 G 6 11 11 G G A . n A 1 7 U 7 12 12 U U A . n A 1 8 U 8 13 13 U U A . n A 1 9 U 9 14 14 U U A . n A 1 10 G 10 15 15 G G A . n A 1 11 A 11 16 16 A A A . n A 1 12 U 12 17 17 U U A . n A 1 13 C 13 18 18 C C A . n A 1 14 C 14 19 19 C C A . n A 1 15 U 15 20 20 U U A . n A 1 16 G 16 21 21 G G A . n A 1 17 G 17 22 22 G G A . n A 1 18 C 18 23 23 C C A . n A 1 19 U 19 24 24 U U A . n A 1 20 C 20 25 25 C C A . n A 1 21 A 21 26 26 A A A . n A 1 22 G 22 27 27 G G A . n A 1 23 G 23 28 28 G G A . n A 1 24 G 24 29 29 G G A . n B 2 1 G 1 500 500 G G B . n B 2 2 C 2 501 501 C C B . n B 2 3 G 3 502 502 G G B . n B 2 4 C 4 503 503 C C B . n B 2 5 C 5 504 504 C C B . n B 2 6 G 6 505 505 G G B . n B 2 7 G 7 506 506 G G B . n B 2 8 C 8 507 507 C C B . n B 2 9 C 9 508 508 C C B . n B 2 10 A 10 509 509 A A B . n B 2 11 A 11 510 510 A A B . n B 2 12 C 12 511 511 C C B . n B 2 13 U 13 512 512 U U B . n B 2 14 C 14 513 513 C C B . n B 2 15 C 15 514 514 C C B . n B 2 16 G 16 515 515 G G B . n B 2 17 U 17 516 516 U U B . n B 2 18 G 18 517 517 G G B . n B 2 19 C 19 518 518 C C B . n B 2 20 C 20 519 519 C C B . n B 2 21 A 21 520 520 A A B . n B 2 22 G 22 521 521 G G B . n B 2 23 C 23 522 522 C C B . n B 2 24 A 24 523 523 A A B . n B 2 25 G 25 524 524 G G B . n B 2 26 C 26 525 525 C C B . n B 2 27 C 27 526 526 C C B . n B 2 28 G 28 527 527 G G B . n B 2 29 C 29 528 528 C C B . n B 2 30 G 30 529 529 G G B . n B 2 31 G 31 530 530 G G B . n B 2 32 U 32 531 531 U U B . n B 2 33 A 33 532 532 A A B . n B 2 34 A 34 533 533 A A B . n B 2 35 U 35 534 534 U U B . n B 2 36 A 36 535 535 A A B . n B 2 37 C 37 536 536 C C B . n B 2 38 G 38 537 537 G G B . n B 2 39 G 39 538 538 G G B . n B 2 40 A 40 539 539 A A B . n B 2 41 G 41 540 540 G G B . n B 2 42 G 42 541 541 G G B . n B 2 43 G 43 542 542 G G B . n B 2 44 C 44 543 543 C C B . n B 2 45 G 45 544 544 G G B . n B 2 46 C 46 545 545 C C B . n B 2 47 G 47 546 546 G G B . n B 2 48 A 48 547 547 A A B . n C 3 1 G 1 885 885 G G C . n C 3 2 G 2 886 886 G G C . n C 3 3 G 3 887 887 G G C . n C 3 4 G 4 888 888 G G C . n C 3 5 A 5 889 889 A A C . n C 3 6 G 6 890 890 G G C . n C 3 7 U 7 891 891 U U C . n C 3 8 A 8 892 892 A A C . n C 3 9 C 9 893 893 C C C . n C 3 10 G 10 894 894 G G C . n C 3 11 G 11 895 895 G G C . n C 3 12 C 12 896 896 C C C . n C 3 13 C 13 897 897 C C C . n C 3 14 G 14 898 898 G G C . n C 3 15 C 15 899 899 C C C . n C 3 16 A 16 900 900 A A C . n C 3 17 A 17 901 901 A A C . n C 3 18 G 18 902 902 G G C . n C 3 19 G 19 903 903 G G C . n C 3 20 C 20 904 904 C C C . n C 3 21 U 21 905 905 U U C . n C 3 22 G 22 906 906 G G C . n C 3 23 A 23 907 907 A A C . n C 3 24 A 24 908 908 A A C . n C 3 25 A 25 909 909 A A C . n C 3 26 C 26 910 910 C C C . n C 3 27 U 27 911 911 U U C . n C 3 28 C 28 912 912 C C C . n C 3 29 A 29 913 913 A A C . n D 4 1 A 1 918 918 A A D . n D 4 2 A 2 919 919 A A D . n D 4 3 U 3 920 920 U U D . n D 4 4 U 4 921 921 U U D . n D 4 5 G 5 922 922 G G D . n D 4 6 A 6 923 923 A A D . n D 4 7 C 7 924 924 C C D . n D 4 8 G 8 925 925 G G D . n D 4 9 G 9 926 926 G G D . n D 4 10 G 10 927 927 G G D . n D 4 11 G 11 928 928 G G D . n D 4 12 G 12 929 929 G G D . n D 4 13 C 13 930 930 C C D . n D 4 14 C 14 931 931 C C D . n D 4 15 G 15 932 932 G G D . n D 4 16 C 16 933 933 C C D . n D 4 17 C 17 934 934 C C D . n D 4 18 U 18 935 935 U U D . n D 4 19 U 19 936 936 U U D . n D 4 20 G 20 937 937 G G D . n D 4 21 U 21 938 938 U U D . n D 4 22 A 22 939 939 A A D . n D 4 23 C 23 940 940 C C D . n D 4 24 A 24 941 941 A A D . n D 4 25 C 25 942 942 C C D . n D 4 26 A 26 943 943 A A D . n D 4 27 C 27 944 944 C C D . n D 4 28 C 28 945 945 C C D . n E 5 1 C 1 1400 1400 C C E . n E 5 2 G 2 1401 1401 G G E . n E 5 3 C 3 1402 1402 C C E . n E 5 4 C 4 1403 1403 C C E . n E 5 5 C 5 1404 1404 C C E . n E 5 6 G 6 1405 1405 G G E . n E 5 7 U 7 1406 1406 U U E . n E 5 8 C 8 1407 1407 C C E . n E 5 9 A 9 1408 1408 A A E . n E 5 10 C 10 1409 1409 C C E . n E 5 11 G 11 1410 1410 G G E . n F 6 1 C 1 1490 1490 C C X . n F 6 2 G 2 1491 1491 G G X . n F 6 3 A 3 1492 1492 A A X . n F 6 4 A 4 1493 1493 A A X . n F 6 5 G 5 1494 1494 G G X . n F 6 6 U 6 1495 1495 U U X . n F 6 7 C 7 1496 1496 C C X . n F 6 8 G 8 1497 1497 G G X . n F 6 9 U 9 1498 1498 U U X . n F 6 10 A 10 1499 1499 A A X . n F 6 11 A 11 1500 1500 A A X . n G 7 1 C 1 1501 1501 C C F . n G 7 2 A 2 1502 1502 A A F . n G 7 3 A 3 1503 1503 A A F . n G 7 4 G 4 1504 1504 G G F . n G 7 5 G 5 1505 1505 G G F . n G 7 6 U 6 1506 1506 U U F . n G 7 7 A 7 1507 1507 A A F . n G 7 8 G 8 1508 1508 G G F . n G 7 9 C 9 1509 1509 C C F . n G 7 10 U 10 1510 1510 U U F . n G 7 11 G 11 1511 1511 G G F . n G 7 12 U 12 1512 1512 U U F . n G 7 13 A 13 1513 1513 A A F . n G 7 14 C 14 1514 1514 C C F . n G 7 15 C 15 1515 1515 C C F . n G 7 16 G 16 1516 1516 G G F . n G 7 17 G 17 1517 1517 G G F . n G 7 18 A 18 1518 1518 A A F . n G 7 19 A 19 1519 1519 A A F . n G 7 20 G 20 1520 1520 G G F . n G 7 21 G 21 1521 1521 G G F . n G 7 22 U 22 1522 1522 U U F . n G 7 23 G 23 1523 1523 G G F . n G 7 24 C 24 1524 1524 C C F . n G 7 25 G 25 1525 1525 G G F . n G 7 26 G 26 1526 1526 G G F . n G 7 27 C 27 1527 1527 C C F . n G 7 28 U 28 1528 1528 U U F . n G 7 29 G 29 1529 1529 G G F . n H 8 1 GLU 1 2 2 GLU GLU G . n H 8 2 GLN 2 3 3 GLN GLN G . n H 8 3 TYR 3 4 4 TYR TYR G . n H 8 4 TYR 4 5 5 TYR TYR G . n H 8 5 GLY 5 6 6 GLY GLY G . n H 8 6 THR 6 7 7 THR THR G . n H 8 7 GLY 7 8 8 GLY GLY G . n H 8 8 ARG 8 9 9 ARG ARG G . n H 8 9 ARG 9 10 10 ARG ARG G . n H 8 10 LYS 10 11 11 LYS LYS G . n H 8 11 GLU 11 12 12 GLU GLU G . n H 8 12 ALA 12 13 13 ALA ALA G . n H 8 13 VAL 13 14 14 VAL VAL G . n H 8 14 ALA 14 15 15 ALA ALA G . n H 8 15 ARG 15 16 16 ARG ARG G . n H 8 16 VAL 16 17 17 VAL VAL G . n H 8 17 PHE 17 18 18 PHE PHE G . n H 8 18 LEU 18 19 19 LEU LEU G . n H 8 19 ARG 19 20 20 ARG ARG G . n H 8 20 PRO 20 21 21 PRO PRO G . n H 8 21 GLY 21 22 22 GLY GLY G . n H 8 22 ASN 22 23 23 ASN ASN G . n H 8 23 GLY 23 24 24 GLY GLY G . n H 8 24 LYS 24 25 25 LYS LYS G . n H 8 25 VAL 25 26 26 VAL VAL G . n H 8 26 THR 26 27 27 THR THR G . n H 8 27 VAL 27 28 28 VAL VAL G . n H 8 28 ASN 28 29 29 ASN ASN G . n H 8 29 GLY 29 30 30 GLY GLY G . n H 8 30 GLN 30 31 31 GLN GLN G . n H 8 31 ASP 31 32 32 ASP ASP G . n H 8 32 PHE 32 33 33 PHE PHE G . n H 8 33 ASN 33 34 34 ASN ASN G . n H 8 34 GLU 34 35 35 GLU GLU G . n H 8 35 TYR 35 36 36 TYR TYR G . n H 8 36 PHE 36 37 37 PHE PHE G . n H 8 37 GLN 37 38 38 GLN GLN G . n H 8 38 GLY 38 39 39 GLY GLY G . n H 8 39 LEU 39 40 40 LEU LEU G . n H 8 40 VAL 40 41 41 VAL VAL G . n H 8 41 ARG 41 42 42 ARG ARG G . n H 8 42 ALA 42 43 43 ALA ALA G . n H 8 43 VAL 43 44 44 VAL VAL G . n H 8 44 ALA 44 45 45 ALA ALA G . n H 8 45 ALA 45 46 46 ALA ALA G . n H 8 46 LEU 46 47 47 LEU LEU G . n H 8 47 GLU 47 48 48 GLU GLU G . n H 8 48 PRO 48 49 49 PRO PRO G . n H 8 49 LEU 49 50 50 LEU LEU G . n H 8 50 ARG 50 51 51 ARG ARG G . n H 8 51 ALA 51 52 52 ALA ALA G . n H 8 52 VAL 52 53 53 VAL VAL G . n H 8 53 ASP 53 54 54 ASP ASP G . n H 8 54 ALA 54 55 55 ALA ALA G . n H 8 55 LEU 55 56 56 LEU LEU G . n H 8 56 GLY 56 57 57 GLY GLY G . n H 8 57 ARG 57 58 58 ARG ARG G . n H 8 58 PHE 58 59 59 PHE PHE G . n H 8 59 ASP 59 60 60 ASP ASP G . n H 8 60 ALA 60 61 61 ALA ALA G . n H 8 61 TYR 61 62 62 TYR TYR G . n H 8 62 ILE 62 63 63 ILE ILE G . n H 8 63 THR 63 64 64 THR THR G . n H 8 64 VAL 64 65 65 VAL VAL G . n H 8 65 ARG 65 66 66 ARG ARG G . n H 8 66 GLY 66 67 67 GLY GLY G . n H 8 67 GLY 67 68 68 GLY GLY G . n H 8 68 GLY 68 69 69 GLY GLY G . n H 8 69 LYS 69 70 70 LYS LYS G . n H 8 70 SER 70 71 71 SER SER G . n H 8 71 GLY 71 72 72 GLY GLY G . n H 8 72 GLN 72 73 73 GLN GLN G . n H 8 73 ILE 73 74 74 ILE ILE G . n H 8 74 ASP 74 75 75 ASP ASP G . n H 8 75 ALA 75 76 76 ALA ALA G . n H 8 76 ILE 76 77 77 ILE ILE G . n H 8 77 LYS 77 78 78 LYS LYS G . n H 8 78 LEU 78 79 79 LEU LEU G . n H 8 79 GLY 79 80 80 GLY GLY G . n H 8 80 ILE 80 81 81 ILE ILE G . n H 8 81 ALA 81 82 82 ALA ALA G . n H 8 82 ARG 82 83 83 ARG ARG G . n H 8 83 ALA 83 84 84 ALA ALA G . n H 8 84 LEU 84 85 85 LEU LEU G . n H 8 85 VAL 85 86 86 VAL VAL G . n H 8 86 GLN 86 87 87 GLN GLN G . n H 8 87 TYR 87 88 88 TYR TYR G . n H 8 88 ASN 88 89 89 ASN ASN G . n H 8 89 PRO 89 90 90 PRO PRO G . n H 8 90 ASP 90 91 91 ASP ASP G . n H 8 91 TYR 91 92 92 TYR TYR G . n H 8 92 ARG 92 93 93 ARG ARG G . n H 8 93 ALA 93 94 94 ALA ALA G . n H 8 94 LYS 94 95 95 LYS LYS G . n H 8 95 LEU 95 96 96 LEU LEU G . n H 8 96 LYS 96 97 97 LYS LYS G . n H 8 97 PRO 97 98 98 PRO PRO G . n H 8 98 LEU 98 99 99 LEU LEU G . n H 8 99 GLY 99 100 100 GLY GLY G . n H 8 100 PHE 100 101 101 PHE PHE G . n H 8 101 LEU 101 102 102 LEU LEU G . n H 8 102 THR 102 103 103 THR THR G . n H 8 103 ARG 103 104 104 ARG ARG G . n H 8 104 ASP 104 105 105 ASP ASP G . n H 8 105 ALA 105 106 106 ALA ALA G . n H 8 106 ARG 106 107 107 ARG ARG G . n H 8 107 VAL 107 108 108 VAL VAL G . n H 8 108 VAL 108 109 109 VAL VAL G . n H 8 109 GLU 109 110 110 GLU GLU G . n H 8 110 ARG 110 111 111 ARG ARG G . n H 8 111 LYS 111 112 112 LYS LYS G . n H 8 112 LYS 112 113 113 LYS LYS G . n H 8 113 TYR 113 114 114 TYR TYR G . n H 8 114 GLY 114 115 115 GLY GLY G . n H 8 115 LYS 115 116 116 LYS LYS G . n H 8 116 HIS 116 117 117 HIS HIS G . n H 8 117 LYS 117 118 118 LYS LYS G . n H 8 118 ALA 118 119 119 ALA ALA G . n H 8 119 ARG 119 120 120 ARG ARG G . n H 8 120 ARG 120 121 121 ARG ARG G . n H 8 121 ALA 121 122 122 ALA ALA G . n H 8 122 PRO 122 123 123 PRO PRO G . n H 8 123 GLN 123 124 124 GLN GLN G . n H 8 124 TYR 124 125 125 TYR TYR G . n H 8 125 SER 125 126 126 SER SER G . n H 8 126 LYS 126 127 127 LYS LYS G . n H 8 127 ARG 127 128 128 ARG ARG G . n I 9 1 PRO 1 5 5 PRO PRO H . n I 9 2 THR 2 6 6 THR THR H . n I 9 3 ILE 3 7 7 ILE ILE H . n I 9 4 ASN 4 8 8 ASN ASN H . n I 9 5 GLN 5 9 9 GLN GLN H . n I 9 6 LEU 6 10 10 LEU LEU H . n I 9 7 VAL 7 11 11 VAL VAL H . n I 9 8 ARG 8 12 12 ARG ARG H . n I 9 9 LYS 9 13 13 LYS LYS H . n I 9 10 GLY 10 14 14 GLY GLY H . n I 9 11 ARG 11 15 15 ARG ARG H . n I 9 12 GLU 12 16 16 GLU GLU H . n I 9 13 LYS 13 17 17 LYS LYS H . n I 9 14 VAL 14 18 18 VAL VAL H . n I 9 15 ARG 15 19 19 ARG ARG H . n I 9 16 LYS 16 20 20 LYS LYS H . n I 9 17 LYS 17 21 21 LYS LYS H . n I 9 18 SER 18 22 22 SER SER H . n I 9 19 LYS 19 23 23 LYS LYS H . n I 9 20 VAL 20 24 24 VAL VAL H . n I 9 21 PRO 21 25 25 PRO PRO H . n I 9 22 ALA 22 26 26 ALA ALA H . n I 9 23 LEU 23 27 27 LEU LEU H . n I 9 24 LYS 24 28 28 LYS LYS H . n I 9 25 GLY 25 29 29 GLY GLY H . n I 9 26 ALA 26 30 30 ALA ALA H . n I 9 27 PRO 27 31 31 PRO PRO H . n I 9 28 PHE 28 32 32 PHE PHE H . n I 9 29 ARG 29 33 33 ARG ARG H . n I 9 30 ARG 30 34 34 ARG ARG H . n I 9 31 GLY 31 35 35 GLY GLY H . n I 9 32 VAL 32 36 36 VAL VAL H . n I 9 33 CYS 33 37 37 CYS CYS H . n I 9 34 THR 34 38 38 THR THR H . n I 9 35 VAL 35 39 39 VAL VAL H . n I 9 36 VAL 36 40 40 VAL VAL H . n I 9 37 ARG 37 41 41 ARG ARG H . n I 9 38 THR 38 42 42 THR THR H . n I 9 39 VAL 39 43 43 VAL VAL H . n I 9 40 THR 40 44 44 THR THR H . n I 9 41 PRO 41 45 45 PRO PRO H . n I 9 42 LYS 42 46 46 LYS LYS H . n I 9 43 LYS 43 47 47 LYS LYS H . n I 9 44 PRO 44 48 48 PRO PRO H . n I 9 45 ASN 45 49 49 ASN ASN H . n I 9 46 SER 46 50 50 SER SER H . n I 9 47 ALA 47 51 51 ALA ALA H . n I 9 48 LEU 48 52 52 LEU LEU H . n I 9 49 ARG 49 53 53 ARG ARG H . n I 9 50 LYS 50 54 54 LYS LYS H . n I 9 51 VAL 51 55 55 VAL VAL H . n I 9 52 ALA 52 56 56 ALA ALA H . n I 9 53 LYS 53 57 57 LYS LYS H . n I 9 54 VAL 54 58 58 VAL VAL H . n I 9 55 ARG 55 59 59 ARG ARG H . n I 9 56 LEU 56 60 60 LEU LEU H . n I 9 57 THR 57 61 61 THR THR H . n I 9 58 SER 58 62 62 SER SER H . n I 9 59 GLY 59 63 63 GLY GLY H . n I 9 60 TYR 60 64 64 TYR TYR H . n I 9 61 GLU 61 65 65 GLU GLU H . n I 9 62 VAL 62 66 66 VAL VAL H . n I 9 63 THR 63 67 67 THR THR H . n I 9 64 ALA 64 68 68 ALA ALA H . n I 9 65 TYR 65 69 69 TYR TYR H . n I 9 66 ILE 66 70 70 ILE ILE H . n I 9 67 PRO 67 71 71 PRO PRO H . n I 9 68 GLY 68 72 72 GLY GLY H . n I 9 69 GLU 69 73 73 GLU GLU H . n I 9 70 GLY 70 74 74 GLY GLY H . n I 9 71 HIS 71 75 75 HIS HIS H . n I 9 72 ASN 72 76 76 ASN ASN H . n I 9 73 LEU 73 77 77 LEU LEU H . n I 9 74 GLN 74 78 78 GLN GLN H . n I 9 75 GLU 75 79 79 GLU GLU H . n I 9 76 HIS 76 80 80 HIS HIS H . n I 9 77 SER 77 81 81 SER SER H . n I 9 78 VAL 78 82 82 VAL VAL H . n I 9 79 VAL 79 83 83 VAL VAL H . n I 9 80 LEU 80 84 84 LEU LEU H . n I 9 81 ILE 81 85 85 ILE ILE H . n I 9 82 ARG 82 86 86 ARG ARG H . n I 9 83 GLY 83 87 87 GLY GLY H . n I 9 84 GLY 84 88 88 GLY GLY H . n I 9 85 ARG 85 89 89 ARG ARG H . n I 9 86 VAL 86 90 90 VAL VAL H . n I 9 87 LYS 87 91 91 LYS LYS H . n I 9 88 ASP 88 92 92 ASP ASP H . n I 9 89 LEU 89 93 93 LEU LEU H . n I 9 90 PRO 90 94 94 PRO PRO H . n I 9 91 GLY 91 95 95 GLY GLY H . n I 9 92 VAL 92 96 96 VAL VAL H . n I 9 93 ARG 93 97 97 ARG ARG H . n I 9 94 TYR 94 98 98 TYR TYR H . n I 9 95 HIS 95 99 99 HIS HIS H . n I 9 96 ILE 96 100 100 ILE ILE H . n I 9 97 VAL 97 101 101 VAL VAL H . n I 9 98 ARG 98 102 102 ARG ARG H . n I 9 99 GLY 99 103 103 GLY GLY H . n I 9 100 VAL 100 104 104 VAL VAL H . n I 9 101 TYR 101 105 105 TYR TYR H . n I 9 102 ASP 102 106 106 ASP ASP H . n I 9 103 ALA 103 107 107 ALA ALA H . n I 9 104 ALA 104 108 108 ALA ALA H . n I 9 105 GLY 105 109 109 GLY GLY H . n I 9 106 VAL 106 110 110 VAL VAL H . n I 9 107 LYS 107 111 111 LYS LYS H . n I 9 108 ASP 108 112 112 ASP ASP H . n I 9 109 ARG 109 113 113 ARG ARG H . n I 9 110 LYS 110 114 114 LYS LYS H . n I 9 111 LYS 111 115 115 LYS LYS H . n I 9 112 SER 112 116 116 SER SER H . n I 9 113 ARG 113 117 117 ARG ARG H . n I 9 114 SER 114 118 118 SER SER H . n I 9 115 LYS 115 119 119 LYS LYS H . n I 9 116 TYR 116 120 120 TYR TYR H . n I 9 117 GLY 117 121 121 GLY GLY H . n I 9 118 THR 118 122 122 THR THR H . n I 9 119 LYS 119 123 123 LYS LYS H . n I 9 120 LYS 120 124 124 LYS LYS H . n I 9 121 PRO 121 125 125 PRO PRO H . n I 9 122 LYS 122 126 126 LYS LYS H . n I 9 123 GLU 123 127 127 GLU GLU H . n I 9 124 ALA 124 128 128 ALA ALA H . n J 10 1 ALA 1 2 2 ALA ALA I . n J 10 2 ARG 2 3 3 ARG ARG I . n J 10 3 ILE 3 4 4 ILE ILE I . n J 10 4 ALA 4 5 5 ALA ALA I . n J 10 5 GLY 5 6 6 GLY GLY I . n J 10 6 VAL 6 7 7 VAL VAL I . n J 10 7 GLU 7 8 8 GLU GLU I . n J 10 8 ILE 8 9 9 ILE ILE I . n J 10 9 PRO 9 10 10 PRO PRO I . n J 10 10 ARG 10 11 11 ARG ARG I . n J 10 11 ASN 11 12 12 ASN ASN I . n J 10 12 LYS 12 13 13 LYS LYS I . n J 10 13 ARG 13 14 14 ARG ARG I . n J 10 14 VAL 14 15 15 VAL VAL I . n J 10 15 ASP 15 16 16 ASP ASP I . n J 10 16 VAL 16 17 17 VAL VAL I . n J 10 17 ALA 17 18 18 ALA ALA I . n J 10 18 LEU 18 19 19 LEU LEU I . n J 10 19 THR 19 20 20 THR THR I . n J 10 20 TYR 20 21 21 TYR TYR I . n J 10 21 ILE 21 22 22 ILE ILE I . n J 10 22 TYR 22 23 23 TYR TYR I . n J 10 23 GLY 23 24 24 GLY GLY I . n J 10 24 ILE 24 25 25 ILE ILE I . n J 10 25 GLY 25 26 26 GLY GLY I . n J 10 26 LYS 26 27 27 LYS LYS I . n J 10 27 ALA 27 28 28 ALA ALA I . n J 10 28 ARG 28 29 29 ARG ARG I . n J 10 29 ALA 29 30 30 ALA ALA I . n J 10 30 LYS 30 31 31 LYS LYS I . n J 10 31 GLU 31 32 32 GLU GLU I . n J 10 32 ALA 32 33 33 ALA ALA I . n J 10 33 LEU 33 34 34 LEU LEU I . n J 10 34 GLU 34 35 35 GLU GLU I . n J 10 35 LYS 35 36 36 LYS LYS I . n J 10 36 THR 36 37 37 THR THR I . n J 10 37 GLY 37 38 38 GLY GLY I . n J 10 38 ILE 38 39 39 ILE ILE I . n J 10 39 ASN 39 40 40 ASN ASN I . n J 10 40 PRO 40 41 41 PRO PRO I . n J 10 41 ALA 41 42 42 ALA ALA I . n J 10 42 THR 42 43 43 THR THR I . n J 10 43 ARG 43 44 44 ARG ARG I . n J 10 44 VAL 44 45 45 VAL VAL I . n J 10 45 LYS 45 46 46 LYS LYS I . n J 10 46 ASP 46 47 47 ASP ASP I . n J 10 47 LEU 47 48 48 LEU LEU I . n J 10 48 THR 48 49 49 THR THR I . n J 10 49 GLU 49 50 50 GLU GLU I . n J 10 50 ALA 50 51 51 ALA ALA I . n J 10 51 GLU 51 52 52 GLU GLU I . n J 10 52 VAL 52 53 53 VAL VAL I . n J 10 53 VAL 53 54 54 VAL VAL I . n J 10 54 ARG 54 55 55 ARG ARG I . n J 10 55 LEU 55 56 56 LEU LEU I . n J 10 56 ARG 56 57 57 ARG ARG I . n J 10 57 GLU 57 58 58 GLU GLU I . n J 10 58 TYR 58 59 59 TYR TYR I . n J 10 59 VAL 59 60 60 VAL VAL I . n J 10 60 GLU 60 61 61 GLU GLU I . n J 10 61 ASN 61 62 62 ASN ASN I . n J 10 62 THR 62 63 63 THR THR I . n J 10 63 TRP 63 64 64 TRP TRP I . n J 10 64 LYS 64 65 65 LYS LYS I . n J 10 65 LEU 65 66 66 LEU LEU I . n J 10 66 GLU 66 67 67 GLU GLU I . n J 10 67 GLY 67 68 68 GLY GLY I . n J 10 68 GLU 68 69 69 GLU GLU I . n J 10 69 LEU 69 70 70 LEU LEU I . n J 10 70 ARG 70 71 71 ARG ARG I . n J 10 71 ALA 71 72 72 ALA ALA I . n J 10 72 GLU 72 73 73 GLU GLU I . n J 10 73 VAL 73 74 74 VAL VAL I . n J 10 74 ALA 74 75 75 ALA ALA I . n J 10 75 ALA 75 76 76 ALA ALA I . n J 10 76 ASN 76 77 77 ASN ASN I . n J 10 77 ILE 77 78 78 ILE ILE I . n J 10 78 LYS 78 79 79 LYS LYS I . n J 10 79 ARG 79 80 80 ARG ARG I . n J 10 80 LEU 80 81 81 LEU LEU I . n J 10 81 MET 81 82 82 MET MET I . n J 10 82 ASP 82 83 83 ASP ASP I . n J 10 83 ILE 83 84 84 ILE ILE I . n J 10 84 GLY 84 85 85 GLY GLY I . n J 10 85 CYS 85 86 86 CYS CYS I . n J 10 86 TYR 86 87 87 TYR TYR I . n J 10 87 ARG 87 88 88 ARG ARG I . n J 10 88 GLY 88 89 89 GLY GLY I . n J 10 89 LEU 89 90 90 LEU LEU I . n J 10 90 ARG 90 91 91 ARG ARG I . n J 10 91 HIS 91 92 92 HIS HIS I . n J 10 92 ARG 92 93 93 ARG ARG I . n J 10 93 ARG 93 94 94 ARG ARG I . n J 10 94 GLY 94 95 95 GLY GLY I . n J 10 95 LEU 95 96 96 LEU LEU I . n J 10 96 PRO 96 97 97 PRO PRO I . n J 10 97 VAL 97 98 98 VAL VAL I . n J 10 98 ARG 98 99 99 ARG ARG I . n J 10 99 GLY 99 100 100 GLY GLY I . n J 10 100 GLN 100 101 101 GLN GLN I . n J 10 101 ARG 101 102 102 ARG ARG I . n J 10 102 THR 102 103 103 THR THR I . n J 10 103 ARG 103 104 104 ARG ARG I . n J 10 104 THR 104 105 105 THR THR I . n J 10 105 ASN 105 106 106 ASN ASN I . n J 10 106 ALA 106 107 107 ALA ALA I . n J 10 107 ARG 107 108 108 ARG ARG I . n J 10 108 THR 108 109 109 THR THR I . n J 10 109 ARG 109 110 110 ARG ARG I . n J 10 110 LYS 110 111 111 LYS LYS I . n J 10 111 GLY 111 112 112 GLY GLY I . n J 10 112 PRO 112 113 113 PRO PRO I . n J 10 113 ARG 113 114 114 ARG ARG I . n J 10 114 LYS 114 115 115 LYS LYS I . n J 10 115 THR 115 116 116 THR THR I . n J 10 116 VAL 116 117 117 VAL VAL I . n J 10 117 ALA 117 118 118 ALA ALA I . n J 10 118 GLY 118 119 119 GLY GLY I . n J 10 119 LYS 119 120 120 LYS LYS I . n J 10 120 LYS 120 121 121 LYS LYS I . n J 10 121 LYS 121 122 122 LYS LYS I . n J 10 122 ALA 122 123 123 ALA ALA I . n J 10 123 PRO 123 124 124 PRO PRO I . n J 10 124 ARG 124 125 125 ARG ARG I . n J 10 125 LYS 125 126 126 LYS LYS I . n # _exptl.entry_id 2R1G _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 376 _refine_hist.pdbx_number_atoms_nucleic_acid 180 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 556 _refine_hist.d_res_high . _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 2R1G _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2R1G _struct.title ;Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2R1G _struct_keywords.pdbx_keywords 'RIBOSOMAL PROTEIN/RNA' _struct_keywords.text ;30S RIBOSOME MATURATION PROTEIN RbfA, COLD SHOCK RESPONSE PROTEIN RbfA, 30S-RbfA COMPLEX, RbfA BINDING SITE ON THE 30S, Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding, Antibiotic resistance, RIBOSOMAL PROTEIN-RNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 9 ? J N N 10 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RS9_THET2 P62669 8 ;EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGI ARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR ; 2 ? 2 UNP RS12_THETH P17293 9 ;PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVL IRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA ; 2 ? 3 UNP RS13_THET2 P62655 10 ;ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRL MDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK ; 2 ? 4 PDB 2R1G 2R1G 1 GGAGAGUUUGAUCCUGGCUCAGGG 1 ? 5 PDB 2R1G 2R1G 2 GCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGA 1 ? 6 PDB 2R1G 2R1G 3 GGGGAGUACGGCCGCAAGGCUGAAACUCA 1 ? 7 PDB 2R1G 2R1G 4 AAUUGACGGGGGCCGCCUUGUACACACC 1 ? 8 PDB 2R1G 2R1G 5 CGCCCGUCACG 1 ? 9 PDB 2R1G 2R1G 6 CGAAGUCGUAA 1 ? 10 PDB 2R1G 2R1G 7 CAAGGUAGCUGUACCGGAAGGUGCGGCUG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2R1G G 1 ? 127 ? P62669 2 ? 128 ? 2 128 2 2 2R1G H 1 ? 124 ? P17293 2 ? 125 ? 5 128 3 3 2R1G I 1 ? 125 ? P62655 2 ? 126 ? 2 126 4 4 2R1G A 1 ? 24 ? 2R1G 6 ? 29 ? 6 29 5 5 2R1G B 1 ? 48 ? 2R1G 500 ? 547 ? 500 547 6 6 2R1G C 1 ? 29 ? 2R1G 885 ? 913 ? 885 913 7 7 2R1G D 1 ? 28 ? 2R1G 918 ? 945 ? 918 945 8 8 2R1G E 1 ? 11 ? 2R1G 1400 ? 1410 ? 1400 1410 9 9 2R1G X 1 ? 11 ? 2R1G 1490 ? 1500 ? 1490 1500 10 10 2R1G F 1 ? 29 ? 2R1G 1501 ? 1529 ? 1501 1529 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_entry_details.sequence_details ;SICNE THE PORTION (1411-1489) OF H44 IS NOT CLOSE TO THE RBFA, THE AUTHOR DID NOT PROVIDE THOSE COORDINATES. THE AUTHOR ONLY PROVIDED THE COORDINATES OF THE PORTION OF THE H44 (CHAINS E AND X) THAT IS CLOSE TO THE RBFA. ; _pdbx_entry_details.entry_id 2R1G _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 2R1G _em_3d_fitting.ref_protocol 'RIGID BODY FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria ;X-RAY COORDINATES OF T. THERMOPHILUS 30S RIBOSOMAL SUBUNIT AND THE HOMOLOGY MODEL OF T. THERMOPHILUS RBFA WERE FITTED INTO THE 12.5 ANGSTROMS RESOLUTION CRYO-EM MAP OF THE T. THERMOPHILUS 30S SUBUNIT-RBFA COMPLEX. ALL THE ATOMIC COORDINATES WERE FITTED AS RIGID BODIES ; _em_3d_fitting.details ;METHOD--CROSS-CORRELATION BASED MANUAL FITTING IN O REFINEMENT PROTOCOL--MULTIPLE RIGID BODY ; _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.pdb_entry_id 1J5E _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.details ? _em_3d_fitting_list.initial_refinement_model_id 1 _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 1J5E # _em_3d_reconstruction.entry_id 2R1G _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.num_particles 61207 _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method 'CRYO-ELECTRON MICROSCOPY AND 3D IMAGE PROCESSING' _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size 2.76 _em_3d_reconstruction.resolution 12.5 _em_3d_reconstruction.magnification_calibration TMV _em_3d_reconstruction.details ;This entry contains only a CA trace for the protein and only phosphorus atom for the RNA in the coordinate. CROSS-CORRELATION COEFFICIENT (CCF) VALUE FOR RBFA HOMOLOGY MODEL FITTED INTO THE CORRESPONDING CRYO-EM DENSITY WAS 0.79 ; _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name '20mM, Hepes-KOH (pH 7.8), 10mM Mg(OAc)2, 200mM NH4Cl, 65mM KCl' _em_buffer.pH 7.8 _em_buffer.details '20mM, Hepes-KOH (pH 7.8), 10mM Mg(OAc)2, 200mM NH4Cl, 65mM KCl' # _em_entity_assembly.id 1 _em_entity_assembly.name 'THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT COMPLEXED WITH RBFA' _em_entity_assembly.type RIBOSOME _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details 'RBFA WAS BOUND TO S1-DEPLETED 30S SUBUNIT' _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 2R1G _em_image_scans.id 1 _em_image_scans.image_recording_id 1 _em_image_scans.number_digital_images 131 _em_image_scans.citation_id ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 2R1G _em_imaging.id 1 _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.specimen_id 1 _em_imaging.date 2005-01-18 _em_imaging.temperature 93 _em_imaging.nominal_defocus_min 700.00 _em_imaging.nominal_defocus_max 3500.00 _em_imaging.tilt_angle_min 0.00 _em_imaging.tilt_angle_max 0.00 _em_imaging.nominal_cs 2.00 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification 50000 _em_imaging.calibrated_magnification 50760 _em_imaging.accelerating_voltage 200 _em_imaging.details 'ZEISS IMAGING SCANNER, STEP SIZE 14micro-m' _em_imaging.specimen_holder_type . _em_imaging.specimen_holder_model . _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'QUANTIFOIL HOLEY-CRBON FILM GRID' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_vitrification.entry_id 2R1G _em_vitrification.id 1 _em_vitrification.instrument 'HOMEMADE PLUNGER' _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'RAPID-FREEZING IN LIQUID ETHANE' _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.method ? _em_vitrification.specimen_id 1 _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 2R1G _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 2R1G _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry C1 _em_single_particle_entity.image_processing_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 U OP3 O N N 479 U P P N N 480 U OP1 O N N 481 U OP2 O N N 482 U "O5'" O N N 483 U "C5'" C N N 484 U "C4'" C N R 485 U "O4'" O N N 486 U "C3'" C N S 487 U "O3'" O N N 488 U "C2'" C N R 489 U "O2'" O N N 490 U "C1'" C N R 491 U N1 N N N 492 U C2 C N N 493 U O2 O N N 494 U N3 N N N 495 U C4 C N N 496 U O4 O N N 497 U C5 C N N 498 U C6 C N N 499 U HOP3 H N N 500 U HOP2 H N N 501 U "H5'" H N N 502 U "H5''" H N N 503 U "H4'" H N N 504 U "H3'" H N N 505 U "HO3'" H N N 506 U "H2'" H N N 507 U "HO2'" H N N 508 U "H1'" H N N 509 U H3 H N N 510 U H5 H N N 511 U H6 H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 U OP3 P sing N N 471 U OP3 HOP3 sing N N 472 U P OP1 doub N N 473 U P OP2 sing N N 474 U P "O5'" sing N N 475 U OP2 HOP2 sing N N 476 U "O5'" "C5'" sing N N 477 U "C5'" "C4'" sing N N 478 U "C5'" "H5'" sing N N 479 U "C5'" "H5''" sing N N 480 U "C4'" "O4'" sing N N 481 U "C4'" "C3'" sing N N 482 U "C4'" "H4'" sing N N 483 U "O4'" "C1'" sing N N 484 U "C3'" "O3'" sing N N 485 U "C3'" "C2'" sing N N 486 U "C3'" "H3'" sing N N 487 U "O3'" "HO3'" sing N N 488 U "C2'" "O2'" sing N N 489 U "C2'" "C1'" sing N N 490 U "C2'" "H2'" sing N N 491 U "O2'" "HO2'" sing N N 492 U "C1'" N1 sing N N 493 U "C1'" "H1'" sing N N 494 U N1 C2 sing N N 495 U N1 C6 sing N N 496 U C2 O2 doub N N 497 U C2 N3 sing N N 498 U N3 C4 sing N N 499 U N3 H3 sing N N 500 U C4 O4 doub N N 501 U C4 C5 sing N N 502 U C5 C6 doub N N 503 U C5 H5 sing N N 504 U C6 H6 sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # _em_ctf_correction.id 1 _em_ctf_correction.details 'CTF CORRECTION OF 3D-MAPS BY WIENER FILTRATION' _em_ctf_correction.type . # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.avg_electron_dose_per_image 20 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id 1 O ? 'MODEL FITTING' MANUAL ? 2 SPIDER ? RECONSTRUCTION ? 1 # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration 0.03 _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # loop_ _pdbx_coordinate_model.asym_id _pdbx_coordinate_model.type A 'P ATOMS ONLY' B 'P ATOMS ONLY' C 'P ATOMS ONLY' D 'P ATOMS ONLY' E 'P ATOMS ONLY' F 'P ATOMS ONLY' G 'P ATOMS ONLY' H 'CA ATOMS ONLY' I 'CA ATOMS ONLY' J 'CA ATOMS ONLY' # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1J5E # _atom_sites.entry_id 2R1G _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C P # loop_