HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-AUG-07 2R41 TITLE CRYSTAL STRUCTURE OF THE PROTEIN OF UNKNOWN FUNCTION FROM ENTEROCOCCUS TITLE 2 FAECALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 226185; SOURCE 4 STRAIN: V583; SOURCE 5 ATCC: 700802; SOURCE 6 GENE: EF_0819; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ALPHA-BETA STRUCTURE, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,H.LI,S.MOY,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 (MCSG) REVDAT 3 13-JUL-11 2R41 1 VERSN REVDAT 2 24-FEB-09 2R41 1 VERSN REVDAT 1 11-SEP-07 2R41 0 JRNL AUTH Y.KIM,H.LI,S.MOY,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF THE PROTEIN OF UNKNOWN FUNCTION FROM JRNL TITL 2 ENTEROCOCCUS FAECALIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 13628 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 722 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 958 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 56 REMARK 3 BIN FREE R VALUE : 0.3570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3306 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 102 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.51000 REMARK 3 B22 (A**2) : 3.51000 REMARK 3 B33 (A**2) : -7.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.359 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.255 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.647 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3463 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4715 ; 1.645 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 427 ; 7.437 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 167 ;35.277 ;23.892 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 567 ;21.086 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;20.570 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 531 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2664 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1499 ; 0.248 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2416 ; 0.335 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 176 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 56 ; 0.215 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.261 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2123 ; 0.684 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3449 ; 1.370 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1340 ; 2.098 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1266 ; 3.401 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 105 REMARK 3 ORIGIN FOR THE GROUP (A): 35.3285 7.7590 49.4647 REMARK 3 T TENSOR REMARK 3 T11: -0.0388 T22: -0.0844 REMARK 3 T33: -0.1260 T12: -0.0102 REMARK 3 T13: -0.0195 T23: 0.0208 REMARK 3 L TENSOR REMARK 3 L11: 2.7609 L22: 1.1020 REMARK 3 L33: 5.1727 L12: 0.3677 REMARK 3 L13: 0.7509 L23: 0.9294 REMARK 3 S TENSOR REMARK 3 S11: 0.1401 S12: -0.1293 S13: -0.0677 REMARK 3 S21: 0.0385 S22: -0.0754 S23: -0.0101 REMARK 3 S31: 0.4146 S32: -0.1689 S33: -0.0646 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 104 REMARK 3 ORIGIN FOR THE GROUP (A): 44.0422 18.8914 69.8602 REMARK 3 T TENSOR REMARK 3 T11: -0.0875 T22: -0.0064 REMARK 3 T33: -0.1088 T12: 0.0430 REMARK 3 T13: -0.0215 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 2.0498 L22: 3.5409 REMARK 3 L33: 3.5537 L12: 0.1060 REMARK 3 L13: 1.8404 L23: -0.2292 REMARK 3 S TENSOR REMARK 3 S11: -0.1468 S12: -0.2176 S13: 0.0359 REMARK 3 S21: 0.1399 S22: 0.0425 S23: -0.0051 REMARK 3 S31: 0.0527 S32: -0.3154 S33: 0.1043 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 106 REMARK 3 ORIGIN FOR THE GROUP (A): 31.8442 29.7239 42.5726 REMARK 3 T TENSOR REMARK 3 T11: -0.0965 T22: -0.0465 REMARK 3 T33: -0.0680 T12: 0.0998 REMARK 3 T13: -0.0463 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 4.0656 L22: 2.4761 REMARK 3 L33: 3.2499 L12: 1.4738 REMARK 3 L13: 1.2178 L23: 0.7669 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: 0.0386 S13: -0.0480 REMARK 3 S21: -0.1577 S22: -0.0197 S23: -0.0420 REMARK 3 S31: -0.0571 S32: -0.1382 S33: 0.0091 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 105 REMARK 3 ORIGIN FOR THE GROUP (A): 64.2917 13.5810 60.0404 REMARK 3 T TENSOR REMARK 3 T11: -0.0907 T22: -0.0727 REMARK 3 T33: -0.1062 T12: 0.0472 REMARK 3 T13: 0.0437 T23: 0.0359 REMARK 3 L TENSOR REMARK 3 L11: 2.6191 L22: 2.3492 REMARK 3 L33: 7.6102 L12: 0.2303 REMARK 3 L13: 0.0347 L23: -1.3189 REMARK 3 S TENSOR REMARK 3 S11: 0.0894 S12: 0.0973 S13: 0.1064 REMARK 3 S21: 0.0820 S22: -0.0391 S23: -0.0556 REMARK 3 S31: -0.1039 S32: 0.2086 S33: -0.0503 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2R41 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-07. REMARK 100 THE RCSB ID CODE IS RCSB044397. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14597 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 41.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11800 REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.60400 REMARK 200 FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 0.1M BIS-TRIS REMARK 280 PH 6.5, 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.92450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 40.99150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 40.99150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 136.38675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 40.99150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 40.99150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.46225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 40.99150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.99150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 136.38675 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 40.99150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.99150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.46225 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 90.92450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TETRAMER OR OCTAMER, BUT NONE ARE CONFIRMED. FOR TETRAMER, REMARK 300 AS THEY ARE IN THE ASYMETRIC UNIT OR A AND C ARE AS IN THE REMARK 300 ASYMETRIC UNIT AND B AND D ARE BY -Y+1/2,X-1/2,Z-1/4 WITH REMARK 300 TRANSLATION OF 40.991 -40.992 -45.462. FOR OCTAMER: ABCD IN THE REMARK 300 ASYMMETRIC UNIT + ANOTHER SET FROM -Y+1,-X+1,-Z+1/2 WITH REMARK 300 TRANSLATION OF 81.983 81.983 90.924. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12500 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 81.98300 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 81.98300 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 90.92450 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4450 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4900 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 40.99150 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -40.99150 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -45.46225 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH D 127 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 PHE A 2 REMARK 465 GLU A 106 REMARK 465 SER A 107 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 LEU B 105 REMARK 465 GLU B 106 REMARK 465 SER B 107 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 SER C 107 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 465 ALA D 0 REMARK 465 MSE D 1 REMARK 465 GLU D 106 REMARK 465 SER D 107 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU D 65 CG GLU D 65 CD 0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU D 21 CB - CG - CD1 ANGL. DEV. = -10.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 94 -57.74 -122.80 REMARK 500 LEU B 37 -62.64 -102.29 REMARK 500 LEU D 37 -61.54 -104.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC28898 RELATED DB: TARGETDB DBREF 2R41 A 1 107 UNP Q837L7 Q837L7_ENTFA 1 107 DBREF 2R41 B 1 107 UNP Q837L7 Q837L7_ENTFA 1 107 DBREF 2R41 C 1 107 UNP Q837L7 Q837L7_ENTFA 1 107 DBREF 2R41 D 1 107 UNP Q837L7 Q837L7_ENTFA 1 107 SEQADV 2R41 SER A -2 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 ASN A -1 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 ALA A 0 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 SER B -2 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 ASN B -1 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 ALA B 0 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 SER C -2 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 ASN C -1 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 ALA C 0 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 SER D -2 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 ASN D -1 UNP Q837L7 EXPRESSION TAG SEQADV 2R41 ALA D 0 UNP Q837L7 EXPRESSION TAG SEQRES 1 A 110 SER ASN ALA MSE PHE GLU ARG PHE ASP SER ASP ARG SER SEQRES 2 A 110 ARG TYR ALA SER LEU GLY VAL VAL SER SER LEU PRO SER SEQRES 3 A 110 GLY LEU ILE ASP SER ILE TRP LEU ILE ILE ASP LEU ASN SEQRES 4 A 110 LEU LYS GLY VAL ILE PRO LEU ASN ASP LEU LEU HIS PHE SEQRES 5 A 110 ASP LEU LEU ASN ASN ASN GLY LYS VAL THR VAL HIS PHE SEQRES 6 A 110 SER GLN GLU ASN SER SER VAL GLU MSE ALA ILE ASP LEU SEQRES 7 A 110 PRO PHE SER TYR SER THR ALA TYR PRO SER ARG ILE PHE SEQRES 8 A 110 ALA PHE ASP ASP GLY HIS ARG GLU THR ILE LEU LEU PRO SEQRES 9 A 110 ALA GLU MSE LEU GLU SER SEQRES 1 B 110 SER ASN ALA MSE PHE GLU ARG PHE ASP SER ASP ARG SER SEQRES 2 B 110 ARG TYR ALA SER LEU GLY VAL VAL SER SER LEU PRO SER SEQRES 3 B 110 GLY LEU ILE ASP SER ILE TRP LEU ILE ILE ASP LEU ASN SEQRES 4 B 110 LEU LYS GLY VAL ILE PRO LEU ASN ASP LEU LEU HIS PHE SEQRES 5 B 110 ASP LEU LEU ASN ASN ASN GLY LYS VAL THR VAL HIS PHE SEQRES 6 B 110 SER GLN GLU ASN SER SER VAL GLU MSE ALA ILE ASP LEU SEQRES 7 B 110 PRO PHE SER TYR SER THR ALA TYR PRO SER ARG ILE PHE SEQRES 8 B 110 ALA PHE ASP ASP GLY HIS ARG GLU THR ILE LEU LEU PRO SEQRES 9 B 110 ALA GLU MSE LEU GLU SER SEQRES 1 C 110 SER ASN ALA MSE PHE GLU ARG PHE ASP SER ASP ARG SER SEQRES 2 C 110 ARG TYR ALA SER LEU GLY VAL VAL SER SER LEU PRO SER SEQRES 3 C 110 GLY LEU ILE ASP SER ILE TRP LEU ILE ILE ASP LEU ASN SEQRES 4 C 110 LEU LYS GLY VAL ILE PRO LEU ASN ASP LEU LEU HIS PHE SEQRES 5 C 110 ASP LEU LEU ASN ASN ASN GLY LYS VAL THR VAL HIS PHE SEQRES 6 C 110 SER GLN GLU ASN SER SER VAL GLU MSE ALA ILE ASP LEU SEQRES 7 C 110 PRO PHE SER TYR SER THR ALA TYR PRO SER ARG ILE PHE SEQRES 8 C 110 ALA PHE ASP ASP GLY HIS ARG GLU THR ILE LEU LEU PRO SEQRES 9 C 110 ALA GLU MSE LEU GLU SER SEQRES 1 D 110 SER ASN ALA MSE PHE GLU ARG PHE ASP SER ASP ARG SER SEQRES 2 D 110 ARG TYR ALA SER LEU GLY VAL VAL SER SER LEU PRO SER SEQRES 3 D 110 GLY LEU ILE ASP SER ILE TRP LEU ILE ILE ASP LEU ASN SEQRES 4 D 110 LEU LYS GLY VAL ILE PRO LEU ASN ASP LEU LEU HIS PHE SEQRES 5 D 110 ASP LEU LEU ASN ASN ASN GLY LYS VAL THR VAL HIS PHE SEQRES 6 D 110 SER GLN GLU ASN SER SER VAL GLU MSE ALA ILE ASP LEU SEQRES 7 D 110 PRO PHE SER TYR SER THR ALA TYR PRO SER ARG ILE PHE SEQRES 8 D 110 ALA PHE ASP ASP GLY HIS ARG GLU THR ILE LEU LEU PRO SEQRES 9 D 110 ALA GLU MSE LEU GLU SER MODRES 2R41 MSE A 71 MET SELENOMETHIONINE MODRES 2R41 MSE A 104 MET SELENOMETHIONINE MODRES 2R41 MSE B 1 MET SELENOMETHIONINE MODRES 2R41 MSE B 71 MET SELENOMETHIONINE MODRES 2R41 MSE B 104 MET SELENOMETHIONINE MODRES 2R41 MSE C 1 MET SELENOMETHIONINE MODRES 2R41 MSE C 71 MET SELENOMETHIONINE MODRES 2R41 MSE C 104 MET SELENOMETHIONINE MODRES 2R41 MSE D 71 MET SELENOMETHIONINE MODRES 2R41 MSE D 104 MET SELENOMETHIONINE HET MSE A 71 8 HET MSE A 104 8 HET MSE B 1 8 HET MSE B 71 8 HET MSE B 104 8 HET MSE C 1 8 HET MSE C 71 8 HET MSE C 104 8 HET MSE D 71 8 HET MSE D 104 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 5 HOH *102(H2 O) HELIX 1 1 LEU A 15 SER A 19 1 5 HELIX 2 2 PRO A 22 LEU A 37 1 16 HELIX 3 3 LEU A 100 MSE A 104 5 5 HELIX 4 4 LEU B 15 SER B 19 1 5 HELIX 5 5 PRO B 22 LEU B 37 1 16 HELIX 6 6 LEU B 100 MSE B 104 5 5 HELIX 7 7 SER C 14 SER C 19 1 6 HELIX 8 8 PRO C 22 LEU C 37 1 16 HELIX 9 9 LEU C 100 MSE C 104 5 5 HELIX 10 10 SER D 14 SER D 19 1 6 HELIX 11 11 PRO D 22 LEU D 37 1 16 HELIX 12 12 LEU D 100 MSE D 104 5 5 SHEET 1 A12 MSE A 71 SER A 78 0 SHEET 2 A12 LYS A 57 SER A 63 -1 N VAL A 60 O ILE A 73 SHEET 3 A12 LEU A 46 ASN A 54 -1 N LEU A 52 O THR A 59 SHEET 4 A12 ARG A 86 ASP A 91 -1 O ALA A 89 N LEU A 47 SHEET 5 A12 GLU A 96 LEU A 99 -1 O THR A 97 N PHE A 90 SHEET 6 A12 ARG A 11 SER A 14 1 N SER A 14 O ILE A 98 SHEET 7 A12 SER B 10 SER B 14 -1 O ALA B 13 N ALA A 13 SHEET 8 A12 ARG B 95 LEU B 99 1 O GLU B 96 N TYR B 12 SHEET 9 A12 ARG B 86 ASP B 91 -1 N PHE B 90 O THR B 97 SHEET 10 A12 LEU B 46 ASN B 54 -1 N LEU B 47 O ALA B 89 SHEET 11 A12 LYS B 57 GLN B 64 -1 O THR B 59 N LEU B 52 SHEET 12 A12 MSE B 71 SER B 78 -1 O MSE B 71 N PHE B 62 SHEET 1 B 6 SER C 10 ALA C 13 0 SHEET 2 B 6 ARG C 95 LEU C 99 1 O GLU C 96 N TYR C 12 SHEET 3 B 6 ARG C 86 ASP C 91 -1 N PHE C 90 O THR C 97 SHEET 4 B 6 LEU C 46 ASN C 54 -1 N PHE C 49 O ILE C 87 SHEET 5 B 6 LYS C 57 SER C 63 -1 O THR C 59 N LEU C 52 SHEET 6 B 6 GLU C 70 SER C 78 -1 O MSE C 71 N PHE C 62 SHEET 1 C 6 SER D 10 ALA D 13 0 SHEET 2 C 6 ARG D 95 LEU D 99 1 O GLU D 96 N TYR D 12 SHEET 3 C 6 ARG D 86 ASP D 91 -1 N PHE D 90 O THR D 97 SHEET 4 C 6 LEU D 46 ASN D 54 -1 N PHE D 49 O ILE D 87 SHEET 5 C 6 LYS D 57 SER D 63 -1 O LYS D 57 N ASN D 54 SHEET 6 C 6 MSE D 71 SER D 78 -1 O ILE D 73 N VAL D 60 LINK C GLU A 70 N MSE A 71 1555 1555 1.33 LINK C MSE A 71 N ALA A 72 1555 1555 1.32 LINK C GLU A 103 N MSE A 104 1555 1555 1.34 LINK C MSE A 104 N LEU A 105 1555 1555 1.34 LINK C MSE B 1 N PHE B 2 1555 1555 1.35 LINK C GLU B 70 N MSE B 71 1555 1555 1.31 LINK C MSE B 71 N ALA B 72 1555 1555 1.33 LINK C GLU B 103 N MSE B 104 1555 1555 1.33 LINK C MSE C 1 N PHE C 2 1555 1555 1.33 LINK C GLU C 70 N MSE C 71 1555 1555 1.32 LINK C MSE C 71 N ALA C 72 1555 1555 1.33 LINK C GLU C 103 N MSE C 104 1555 1555 1.34 LINK C MSE C 104 N LEU C 105 1555 1555 1.33 LINK C GLU D 70 N MSE D 71 1555 1555 1.33 LINK C MSE D 71 N ALA D 72 1555 1555 1.34 LINK C GLU D 103 N MSE D 104 1555 1555 1.33 LINK C MSE D 104 N LEU D 105 1555 1555 1.33 CRYST1 81.983 81.983 181.849 90.00 90.00 90.00 P 43 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012198 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012198 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005499 0.00000