HEADER TRANSFERASE, TRANSPORT PROTEIN 30-AUG-07 2R48 TITLE CRYSTAL STRUCTURE OF THE FRUCTOSE SPECIFIC IIB SUBUNIT OF PTS SYSTEM TITLE 2 FROM BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOTRANSFERASE SYSTEM (PTS) MANNOSE-SPECIFIC ENZYME COMPND 3 IIBCA COMPONENT; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RESIDUES 2-104; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: MANP, BSU12010; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS PTS SYSTEM, PHOSPHOTRANSFERASE SYSTEM, FRUCTOSE SPECIFIC IIB SUBUNIT, KEYWDS 2 PFAM02379, PSI-2, MCSG, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MEMBRANE, SUGAR KEYWDS 4 TRANSPORT, TRANSMEMBRANE, TRANSPORT, TRANSFERASE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,M.CUFF,A.SATHER,S.CLANCY,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-JUL-11 2R48 1 VERSN REVDAT 2 24-FEB-09 2R48 1 VERSN REVDAT 1 11-SEP-07 2R48 0 JRNL AUTH B.NOCEK,M.CUFF,A.SATHER,S.CLANCY,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF THE FRUCTOSE SPECIFIC IIB SUBUNIT OF JRNL TITL 2 PTS SYSTEM FROM BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 7402 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 361 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 359 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 65.03 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 13 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 795 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 57 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.57000 REMARK 3 B22 (A**2) : 1.57000 REMARK 3 B33 (A**2) : -3.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.158 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.153 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.117 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.620 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 805 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 550 ; 0.011 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1086 ; 1.712 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1360 ; 1.033 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 106 ; 5.461 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 34 ;37.292 ;25.882 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 155 ;13.805 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;14.832 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 129 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 896 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 137 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 159 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 556 ; 0.207 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 392 ; 0.171 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 443 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 42 ; 0.201 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.229 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 35 ; 0.248 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.135 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 629 ; 1.171 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 216 ; 0.267 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 838 ; 1.417 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 300 ; 2.453 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 247 ; 3.519 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 7 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9321 7.1277 20.1301 REMARK 3 T TENSOR REMARK 3 T11: 0.1251 T22: 0.1426 REMARK 3 T33: 0.1441 T12: -0.0642 REMARK 3 T13: -0.0525 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 5.6179 L22: 7.9656 REMARK 3 L33: 16.4570 L12: -3.4615 REMARK 3 L13: 4.6220 L23: -7.7610 REMARK 3 S TENSOR REMARK 3 S11: 0.0940 S12: -0.1794 S13: -0.2212 REMARK 3 S21: 0.2578 S22: -0.1483 S23: -0.4807 REMARK 3 S31: 0.0345 S32: 0.4865 S33: 0.0543 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 14 REMARK 3 ORIGIN FOR THE GROUP (A): 5.1731 16.4606 3.1306 REMARK 3 T TENSOR REMARK 3 T11: 0.2730 T22: 0.1979 REMARK 3 T33: 0.0971 T12: 0.0634 REMARK 3 T13: -0.0413 T23: 0.0733 REMARK 3 L TENSOR REMARK 3 L11: 5.0906 L22: 0.5335 REMARK 3 L33: 20.2913 L12: -0.8160 REMARK 3 L13: -9.5412 L23: 2.5142 REMARK 3 S TENSOR REMARK 3 S11: 0.4876 S12: 0.4491 S13: -0.1222 REMARK 3 S21: -0.6574 S22: -0.2086 S23: 0.2103 REMARK 3 S31: -1.4826 S32: -0.7701 S33: -0.2790 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 22 REMARK 3 ORIGIN FOR THE GROUP (A): 12.4663 11.5128 5.0293 REMARK 3 T TENSOR REMARK 3 T11: 0.1309 T22: 0.2012 REMARK 3 T33: 0.0645 T12: -0.0495 REMARK 3 T13: 0.0027 T23: -0.0244 REMARK 3 L TENSOR REMARK 3 L11: 3.6193 L22: 1.6498 REMARK 3 L33: 4.7648 L12: -2.3206 REMARK 3 L13: -1.3600 L23: 0.0423 REMARK 3 S TENSOR REMARK 3 S11: -0.0280 S12: 0.2722 S13: -0.1386 REMARK 3 S21: 0.0658 S22: 0.0530 S23: 0.0328 REMARK 3 S31: -0.2252 S32: 0.3266 S33: -0.0250 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 28 REMARK 3 ORIGIN FOR THE GROUP (A): 19.2290 6.8132 12.0649 REMARK 3 T TENSOR REMARK 3 T11: 0.1145 T22: 0.1989 REMARK 3 T33: 0.0749 T12: -0.0289 REMARK 3 T13: -0.0268 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 4.3642 L22: 10.7034 REMARK 3 L33: 9.7303 L12: -2.6329 REMARK 3 L13: -0.6913 L23: -6.5657 REMARK 3 S TENSOR REMARK 3 S11: 0.1189 S12: 0.4724 S13: 0.1149 REMARK 3 S21: -0.5788 S22: -0.2735 S23: -0.1648 REMARK 3 S31: 0.9969 S32: -0.1877 S33: 0.1546 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 29 A 37 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5147 5.9149 16.1082 REMARK 3 T TENSOR REMARK 3 T11: 0.1191 T22: 0.1296 REMARK 3 T33: 0.1058 T12: -0.0044 REMARK 3 T13: -0.0299 T23: -0.0822 REMARK 3 L TENSOR REMARK 3 L11: 20.1694 L22: 1.5174 REMARK 3 L33: 2.5294 L12: -0.6031 REMARK 3 L13: 1.4149 L23: -1.9511 REMARK 3 S TENSOR REMARK 3 S11: 0.2866 S12: 0.2759 S13: -0.4066 REMARK 3 S21: -0.0574 S22: -0.1032 S23: -0.0315 REMARK 3 S31: 0.0579 S32: 0.2533 S33: -0.1834 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 38 A 44 REMARK 3 ORIGIN FOR THE GROUP (A): 0.9645 10.2465 7.3578 REMARK 3 T TENSOR REMARK 3 T11: 0.1227 T22: 0.2006 REMARK 3 T33: 0.0950 T12: -0.0466 REMARK 3 T13: -0.0319 T23: 0.0622 REMARK 3 L TENSOR REMARK 3 L11: 12.9077 L22: 16.8084 REMARK 3 L33: 6.7492 L12: -2.1269 REMARK 3 L13: 8.5681 L23: -5.5920 REMARK 3 S TENSOR REMARK 3 S11: -0.0059 S12: 0.8655 S13: 0.1718 REMARK 3 S21: -0.8942 S22: 0.3388 S23: 0.5387 REMARK 3 S31: 0.3377 S32: 0.5316 S33: -0.3329 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 45 A 49 REMARK 3 ORIGIN FOR THE GROUP (A): 3.2867 4.3065 14.3260 REMARK 3 T TENSOR REMARK 3 T11: 0.0541 T22: 0.1136 REMARK 3 T33: 0.1419 T12: -0.0497 REMARK 3 T13: -0.0268 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.2511 L22: 6.0429 REMARK 3 L33: 34.3763 L12: -2.2822 REMARK 3 L13: 3.1636 L23: -2.6459 REMARK 3 S TENSOR REMARK 3 S11: -0.0066 S12: 0.1042 S13: -0.2526 REMARK 3 S21: -0.3727 S22: 0.3250 S23: 0.2075 REMARK 3 S31: 0.0422 S32: -0.8866 S33: -0.3184 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 54 REMARK 3 ORIGIN FOR THE GROUP (A): 3.9783 3.1053 25.1406 REMARK 3 T TENSOR REMARK 3 T11: 0.1083 T22: 0.1107 REMARK 3 T33: 0.1315 T12: -0.0384 REMARK 3 T13: 0.0404 T23: 0.0670 REMARK 3 L TENSOR REMARK 3 L11: 15.3247 L22: 15.4545 REMARK 3 L33: 13.5616 L12: 2.3432 REMARK 3 L13: 14.3456 L23: 0.7788 REMARK 3 S TENSOR REMARK 3 S11: 0.1880 S12: -0.9389 S13: -0.4709 REMARK 3 S21: 0.6321 S22: -0.1915 S23: 0.5438 REMARK 3 S31: 0.0261 S32: -0.5540 S33: 0.0035 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 55 A 66 REMARK 3 ORIGIN FOR THE GROUP (A): 8.4543 14.1038 17.9965 REMARK 3 T TENSOR REMARK 3 T11: 0.1551 T22: 0.0958 REMARK 3 T33: 0.0798 T12: -0.0241 REMARK 3 T13: -0.0037 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.2691 L22: 2.8351 REMARK 3 L33: 9.5780 L12: 0.9828 REMARK 3 L13: 0.4655 L23: -4.0567 REMARK 3 S TENSOR REMARK 3 S11: 0.0046 S12: -0.0934 S13: 0.1234 REMARK 3 S21: 0.0317 S22: 0.1124 S23: 0.0117 REMARK 3 S31: -0.1417 S32: -0.0593 S33: -0.1171 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 67 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 1.3162 14.4677 22.1823 REMARK 3 T TENSOR REMARK 3 T11: 0.1353 T22: 0.1111 REMARK 3 T33: 0.0953 T12: 0.0287 REMARK 3 T13: 0.0542 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 5.6148 L22: 3.3661 REMARK 3 L33: 17.7920 L12: 0.6792 REMARK 3 L13: 2.4333 L23: -6.4840 REMARK 3 S TENSOR REMARK 3 S11: 0.0157 S12: -0.1594 S13: 0.0456 REMARK 3 S21: 0.4454 S22: 0.3323 S23: 0.4401 REMARK 3 S31: -0.9211 S32: -0.0938 S33: -0.3479 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6717 17.3855 20.1150 REMARK 3 T TENSOR REMARK 3 T11: 0.1457 T22: 0.1230 REMARK 3 T33: 0.0818 T12: -0.0389 REMARK 3 T13: -0.0070 T23: -0.0313 REMARK 3 L TENSOR REMARK 3 L11: 1.6040 L22: 2.7049 REMARK 3 L33: 8.4246 L12: 0.6606 REMARK 3 L13: -0.8564 L23: -3.0023 REMARK 3 S TENSOR REMARK 3 S11: 0.1168 S12: -0.0643 S13: 0.1380 REMARK 3 S21: 0.1504 S22: 0.1602 S23: 0.0498 REMARK 3 S31: -0.2098 S32: 0.0277 S33: -0.2770 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 87 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9641 19.1970 7.7891 REMARK 3 T TENSOR REMARK 3 T11: 0.1713 T22: 0.2219 REMARK 3 T33: 0.0706 T12: -0.1009 REMARK 3 T13: 0.0822 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 13.0902 L22: 5.5926 REMARK 3 L33: 9.1583 L12: 0.9207 REMARK 3 L13: 4.1223 L23: 2.1781 REMARK 3 S TENSOR REMARK 3 S11: 0.2052 S12: 0.0792 S13: 0.2494 REMARK 3 S21: -0.7086 S22: 0.1443 S23: -0.0892 REMARK 3 S31: -1.0264 S32: 0.9109 S33: -0.3495 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 88 A 97 REMARK 3 ORIGIN FOR THE GROUP (A): 20.6096 15.5253 17.9873 REMARK 3 T TENSOR REMARK 3 T11: 0.0232 T22: 0.1651 REMARK 3 T33: 0.1110 T12: -0.0792 REMARK 3 T13: -0.0216 T23: -0.0394 REMARK 3 L TENSOR REMARK 3 L11: 4.7936 L22: 3.4697 REMARK 3 L33: 33.1470 L12: -1.3329 REMARK 3 L13: 4.5168 L23: -2.4981 REMARK 3 S TENSOR REMARK 3 S11: -0.1619 S12: 0.2423 S13: -0.1452 REMARK 3 S21: 0.2347 S22: 0.0903 S23: -0.5422 REMARK 3 S31: -0.7477 S32: 0.7397 S33: 0.0716 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 98 A 104 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5790 18.6175 27.5104 REMARK 3 T TENSOR REMARK 3 T11: 0.0748 T22: 0.0670 REMARK 3 T33: 0.1409 T12: 0.0730 REMARK 3 T13: -0.0186 T23: -0.1130 REMARK 3 L TENSOR REMARK 3 L11: 41.6031 L22: 7.1482 REMARK 3 L33: 7.4387 L12: -2.7172 REMARK 3 L13: 3.8688 L23: -3.6201 REMARK 3 S TENSOR REMARK 3 S11: -0.6178 S12: -1.0372 S13: 1.5352 REMARK 3 S21: 0.2931 S22: 0.1069 S23: -0.8760 REMARK 3 S31: -0.0898 S32: -0.3332 S33: 0.5110 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2R48 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-07. REMARK 100 THE RCSB ID CODE IS RCSB044404. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950, 0.97960 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7790 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.37800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXD, SHELXE, MLPHARE, DM, SOLVE/ REMARK 200 RESOLVE, ARP/WARP, CCP4, COOT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 30.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE, 20% PEG 3350, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.12500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 24.46550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 24.46550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.06250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 24.46550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 24.46550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.18750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 24.46550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 24.46550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 17.06250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 24.46550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 24.46550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 51.18750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 34.12500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ACCORDING TO AUTHORS, THE CRYSTAL PACKING INDICATES THAT REMARK 300 DIMER COULD BE THE BIOLOGICALLY RELEVANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 126 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 121 O HOH A 158 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC1979.1 RELATED DB: TARGETDB DBREF 2R48 A 2 104 UNP O31645 O31645_BACSU 2 104 SEQADV 2R48 SER A -1 UNP O31645 EXPRESSION TAG SEQADV 2R48 ASN A 0 UNP O31645 EXPRESSION TAG SEQADV 2R48 ALA A 1 UNP O31645 EXPRESSION TAG SEQRES 1 A 106 SER ASN ALA LYS LEU LEU ALA ILE THR SER CYS PRO ASN SEQRES 2 A 106 GLY ILE ALA HIS THR TYR MSE ALA ALA GLU ASN LEU GLN SEQRES 3 A 106 LYS ALA ALA ASP ARG LEU GLY VAL SER ILE LYS VAL GLU SEQRES 4 A 106 THR GLN GLY GLY ILE GLY VAL GLU ASN LYS LEU THR GLU SEQRES 5 A 106 GLU GLU ILE ARG GLU ALA ASP ALA ILE ILE ILE ALA ALA SEQRES 6 A 106 ASP ARG SER VAL ASN LYS ASP ARG PHE ILE GLY LYS LYS SEQRES 7 A 106 LEU LEU SER VAL GLY VAL GLN ASP GLY ILE ARG LYS PRO SEQRES 8 A 106 GLU GLU LEU ILE GLN LYS ALA LEU ASN GLY ASP ILE PRO SEQRES 9 A 106 VAL TYR MODRES 2R48 MSE A 18 MET SELENOMETHIONINE HET MSE A 18 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE C5 H11 N O2 SE FORMUL 2 HOH *57(H2 O) HELIX 1 1 ILE A 13 GLY A 31 1 19 HELIX 2 2 THR A 49 ALA A 56 1 8 HELIX 3 3 LYS A 69 ILE A 73 5 5 HELIX 4 4 GLY A 81 LYS A 88 1 8 HELIX 5 5 LYS A 88 GLY A 99 1 12 SHEET 1 A 5 GLY A 43 GLU A 45 0 SHEET 2 A 5 SER A 33 GLY A 40 -1 N THR A 38 O GLU A 45 SHEET 3 A 5 LYS A 2 SER A 8 1 N ALA A 5 O GLU A 37 SHEET 4 A 5 ALA A 58 ALA A 63 1 O ALA A 62 N ILE A 6 SHEET 5 A 5 LEU A 77 VAL A 80 1 O VAL A 80 N ILE A 61 LINK C TYR A 17 N MSE A 18 1555 1555 1.33 LINK C MSE A 18 N ALA A 19 1555 1555 1.34 CRYST1 48.931 48.931 68.250 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020437 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020437 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014652 0.00000