HEADER TRANSPORT PROTEIN 04-SEP-07 2R5O TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF WZT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ATP BINDING COMPONENT OF ABC-TRANSPORTER; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: O9A; SOURCE 5 GENE: ORF431; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TOP10; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBAD KEYWDS ABC TRANSPORTER, IMMUNOGLOBULIN FOLD, CARBOHYDRATE BINDING, DOMAIN KEYWDS 2 SWAPPING, O ANTIGEN EXPORT, ATP-BINDING, NUCLEOTIDE-BINDING, KEYWDS 3 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.S.KIMBER,L.CUTHBERTSON,C.WHITFIELD REVDAT 4 21-FEB-24 2R5O 1 REMARK SEQADV LINK REVDAT 3 25-OCT-17 2R5O 1 REMARK REVDAT 2 24-FEB-09 2R5O 1 VERSN REVDAT 1 25-DEC-07 2R5O 0 JRNL AUTH L.CUTHBERTSON,M.S.KIMBER,C.WHITFIELD JRNL TITL SUBSTRATE BINDING BY A BACTERIAL ABC TRANSPORTER INVOLVED IN JRNL TITL 2 POLYSACCHARIDE EXPORT. JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 19529 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 18032609 JRNL DOI 10.1073/PNAS.0705709104 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 96876 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4829 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.34 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6793 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 354 REMARK 3 BIN FREE R VALUE : 0.2100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2648 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 364 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.044 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.045 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.026 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.180 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2856 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2566 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3877 ; 1.456 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5990 ; 0.827 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 332 ; 6.161 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;31.849 ;23.958 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 484 ;11.934 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;19.358 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 433 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3113 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 612 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 464 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2631 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1364 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1739 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 229 ; 0.194 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 28 ; 0.239 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 96 ; 0.249 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 37 ; 0.214 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1680 ; 0.738 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 685 ; 0.214 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2764 ; 1.251 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1214 ; 1.775 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1113 ; 2.582 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2R5O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044456. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98154 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.44400 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE 2.10, RESOLVE 2.10 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 5000 MME, 6% (V/V) GLYCEROL, REMARK 280 0.4 M NACL, 0.16 M (NH4)2SO4, 0.08 M NA ACETATE, PH 4.6, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 53.04050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 53.04050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.17550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 53.04050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 53.04050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.17550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 53.04050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.04050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.17550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 53.04050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.04050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 35.17550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4790 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11160 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -106.08100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 244 REMARK 465 HIS A 245 REMARK 465 HIS A 246 REMARK 465 HIS A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 465 HIS A 250 REMARK 465 HIS A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 465 HIS A 254 REMARK 465 ILE A 255 REMARK 465 SER A 256 REMARK 465 SER A 257 REMARK 465 ALA A 258 REMARK 465 SER A 259 REMARK 465 GLY A 260 REMARK 465 GLU A 261 REMARK 465 SER A 262 REMARK 465 GLN A 263 REMARK 465 GLN A 431 REMARK 465 MET B 244 REMARK 465 HIS B 245 REMARK 465 HIS B 246 REMARK 465 HIS B 247 REMARK 465 HIS B 248 REMARK 465 HIS B 249 REMARK 465 HIS B 250 REMARK 465 HIS B 251 REMARK 465 HIS B 252 REMARK 465 HIS B 253 REMARK 465 HIS B 254 REMARK 465 ILE B 255 REMARK 465 SER B 256 REMARK 465 SER B 257 REMARK 465 ALA B 258 REMARK 465 SER B 259 REMARK 465 GLY B 260 REMARK 465 GLU B 261 REMARK 465 SER B 262 REMARK 465 GLN B 263 REMARK 465 TYR B 430 REMARK 465 GLN B 431 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 424 O HOH B 583 1.71 REMARK 500 O HOH B 529 O HOH B 547 2.00 REMARK 500 OG SER B 265 OD1 ASP B 267 2.07 REMARK 500 O HOH B 507 O HOH B 611 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 473 O HOH B 482 6555 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 312 -4.62 80.91 REMARK 500 THR A 395 -23.03 -140.37 REMARK 500 ASP A 396 79.59 -160.64 REMARK 500 ARG A 403 77.49 -102.68 REMARK 500 ASP B 376 44.06 -84.77 REMARK 500 THR B 395 -100.77 -123.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 13 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 345 OH REMARK 620 2 HOH A 434 O 96.3 REMARK 620 3 ASP B 422 OD1 102.9 128.9 REMARK 620 4 HOH B 447 O 100.3 102.2 119.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 12 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 422 OD1 REMARK 620 2 HOH A 551 O 121.0 REMARK 620 3 HOH A 585 O 78.6 80.4 REMARK 620 4 TYR B 345 OH 97.2 98.5 174.0 REMARK 620 5 HOH B 599 O 126.3 104.4 82.8 103.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 9 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 383 O REMARK 620 2 SER B 385 OG 135.3 REMARK 620 3 ASP B 405 OD1 106.1 86.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 10 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 284 OH REMARK 620 2 HOH B 446 O 117.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 432 DBREF 2R5O A 255 431 UNP Q47591 Q47591_ECOLI 255 431 DBREF 2R5O B 255 431 UNP Q47591 Q47591_ECOLI 255 431 SEQADV 2R5O MET A 244 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 245 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 246 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 247 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 248 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 249 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 250 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 251 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 252 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 253 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS A 254 UNP Q47591 EXPRESSION TAG SEQADV 2R5O MET B 244 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 245 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 246 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 247 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 248 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 249 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 250 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 251 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 252 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 253 UNP Q47591 EXPRESSION TAG SEQADV 2R5O HIS B 254 UNP Q47591 EXPRESSION TAG SEQRES 1 A 188 MET HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS ILE SER SEQRES 2 A 188 SER ALA SER GLY GLU SER GLN MET SER LEU ASP GLU ILE SEQRES 3 A 188 GLU ASP VAL TYR HIS THR ARG PRO GLY TYR ARG PRO GLU SEQRES 4 A 188 GLU TYR ARG TRP GLY GLN GLY GLY ALA LYS ILE ILE ASP SEQRES 5 A 188 TYR HIS ILE GLN SER ALA GLY VAL ASP PHE PRO PRO SER SEQRES 6 A 188 LEU THR GLY ASN GLN GLN THR ASP PHE LEU MET LYS VAL SEQRES 7 A 188 VAL PHE GLU TYR ASP PHE ASP CYS VAL VAL PRO GLY ILE SEQRES 8 A 188 LEU ILE LYS THR LEU ASP GLY LEU PHE LEU TYR GLY THR SEQRES 9 A 188 ASN SER PHE LEU ALA SER GLU GLY ARG GLU ASN ILE SER SEQRES 10 A 188 VAL SER ARG GLY ASP VAL ARG VAL PHE LYS PHE SER LEU SEQRES 11 A 188 PRO VAL ASP LEU ASN SER GLY ASP TYR LEU LEU SER PHE SEQRES 12 A 188 GLY ILE SER ALA GLY ASN PRO GLN THR ASP MET THR PRO SEQRES 13 A 188 LEU ASP ARG ARG TYR ASP SER ILE ILE LEU HIS VAL THR SEQRES 14 A 188 LYS SER MET ASP PHE TRP GLY VAL ILE ASP LEU LYS SER SEQRES 15 A 188 SER PHE THR SER TYR GLN SEQRES 1 B 188 MET HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS ILE SER SEQRES 2 B 188 SER ALA SER GLY GLU SER GLN MET SER LEU ASP GLU ILE SEQRES 3 B 188 GLU ASP VAL TYR HIS THR ARG PRO GLY TYR ARG PRO GLU SEQRES 4 B 188 GLU TYR ARG TRP GLY GLN GLY GLY ALA LYS ILE ILE ASP SEQRES 5 B 188 TYR HIS ILE GLN SER ALA GLY VAL ASP PHE PRO PRO SER SEQRES 6 B 188 LEU THR GLY ASN GLN GLN THR ASP PHE LEU MET LYS VAL SEQRES 7 B 188 VAL PHE GLU TYR ASP PHE ASP CYS VAL VAL PRO GLY ILE SEQRES 8 B 188 LEU ILE LYS THR LEU ASP GLY LEU PHE LEU TYR GLY THR SEQRES 9 B 188 ASN SER PHE LEU ALA SER GLU GLY ARG GLU ASN ILE SER SEQRES 10 B 188 VAL SER ARG GLY ASP VAL ARG VAL PHE LYS PHE SER LEU SEQRES 11 B 188 PRO VAL ASP LEU ASN SER GLY ASP TYR LEU LEU SER PHE SEQRES 12 B 188 GLY ILE SER ALA GLY ASN PRO GLN THR ASP MET THR PRO SEQRES 13 B 188 LEU ASP ARG ARG TYR ASP SER ILE ILE LEU HIS VAL THR SEQRES 14 B 188 LYS SER MET ASP PHE TRP GLY VAL ILE ASP LEU LYS SER SEQRES 15 B 188 SER PHE THR SER TYR GLN HET CL A 1 1 HET CL A 2 1 HET CL A 8 1 HET NA A 11 1 HET NA A 13 1 HET PG4 A 432 13 HET NA B 9 1 HET NA B 10 1 HET NA B 12 1 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 3 CL 3(CL 1-) FORMUL 6 NA 5(NA 1+) FORMUL 8 PG4 C8 H18 O5 FORMUL 12 HOH *364(H2 O) HELIX 1 1 VAL A 272 ARG A 276 5 5 HELIX 2 2 SER A 349 SER A 353 1 5 HELIX 3 3 VAL B 272 ARG B 276 5 5 HELIX 4 4 SER B 349 SER B 353 1 5 SHEET 1 A 5 TYR A 284 TRP A 286 0 SHEET 2 A 5 ASP A 396 THR A 412 -1 O ARG A 402 N TRP A 286 SHEET 3 A 5 GLY A 380 ASN A 392 -1 N ALA A 390 O THR A 398 SHEET 4 A 5 PHE A 327 THR A 338 -1 N LYS A 337 O LEU A 383 SHEET 5 A 5 PHE A 343 ASN A 348 -1 O TYR A 345 N ILE A 336 SHEET 1 B 5 LEU A 309 THR A 310 0 SHEET 2 B 5 ASP A 396 THR A 412 1 O HIS A 410 N LEU A 309 SHEET 3 B 5 GLY A 380 ASN A 392 -1 N ALA A 390 O THR A 398 SHEET 4 B 5 PHE A 327 THR A 338 -1 N LYS A 337 O LEU A 383 SHEET 5 B 5 ILE A 359 VAL A 361 -1 O ILE A 359 N VAL A 330 SHEET 1 C 5 VAL A 303 ASP A 304 0 SHEET 2 C 5 ALA A 291 SER A 300 -1 N SER A 300 O VAL A 303 SHEET 3 C 5 GLN A 314 PHE A 323 -1 O ASP A 316 N GLN A 299 SHEET 4 C 5 VAL A 366 PRO A 374 -1 O PHE A 371 N PHE A 317 SHEET 5 C 5 SER B 426 THR B 428 -1 O THR B 428 N LYS A 370 SHEET 1 D 6 TRP A 418 GLY A 419 0 SHEET 2 D 6 PHE B 343 ASN B 348 -1 O GLY B 346 N TRP A 418 SHEET 3 D 6 PHE B 327 THR B 338 -1 N ILE B 336 O TYR B 345 SHEET 4 D 6 GLY B 380 GLY B 391 -1 O SER B 389 N VAL B 331 SHEET 5 D 6 MET B 397 VAL B 411 -1 O ARG B 403 N PHE B 386 SHEET 6 D 6 TYR B 284 TRP B 286 -1 N TRP B 286 O ARG B 402 SHEET 1 E 4 TRP A 418 GLY A 419 0 SHEET 2 E 4 PHE B 343 ASN B 348 -1 O GLY B 346 N TRP A 418 SHEET 3 E 4 PHE B 327 THR B 338 -1 N ILE B 336 O TYR B 345 SHEET 4 E 4 ILE B 359 VAL B 361 -1 O VAL B 361 N PHE B 327 SHEET 1 F 5 SER A 426 TYR A 430 0 SHEET 2 F 5 VAL B 366 PRO B 374 -1 O LYS B 370 N THR A 428 SHEET 3 F 5 GLN B 314 PHE B 323 -1 N PHE B 317 O PHE B 371 SHEET 4 F 5 ALA B 291 SER B 300 -1 N HIS B 297 O LEU B 318 SHEET 5 F 5 VAL B 303 ASP B 304 -1 O VAL B 303 N SER B 300 LINK NA NA A 11 OH TYR A 284 1555 1555 2.54 LINK NA NA A 13 OH TYR A 345 1555 1555 2.66 LINK NA NA A 13 O HOH A 434 1555 1555 2.74 LINK NA NA A 13 OD1 ASP B 422 1555 1555 2.67 LINK NA NA A 13 O HOH B 447 1555 1555 2.70 LINK OD1 ASP A 422 NA NA B 12 1555 1555 2.70 LINK O HOH A 551 NA NA B 12 1555 1555 2.85 LINK O HOH A 585 NA NA B 12 1555 1555 2.96 LINK NA NA B 9 O LEU B 383 1555 1555 2.89 LINK NA NA B 9 OG SER B 385 1555 1555 2.66 LINK NA NA B 9 OD1 ASP B 405 1555 1555 2.77 LINK NA NA B 10 OH TYR B 284 1555 1555 2.53 LINK NA NA B 10 O HOH B 446 1555 1555 2.63 LINK NA NA B 12 OH TYR B 345 1555 1555 2.64 LINK NA NA B 12 O HOH B 599 1555 1555 2.74 SITE 1 AC1 2 ARG A 402 HOH A 463 SITE 1 AC2 5 ARG A 356 SER B 300 ALA B 301 GLY B 302 SITE 2 AC2 5 HOH B 505 SITE 1 AC3 4 ARG A 356 HOH A 544 SER B 426 PHE B 427 SITE 1 AC4 6 LEU B 335 LYS B 337 LEU B 383 LEU B 384 SITE 2 AC4 6 SER B 385 ASP B 405 SITE 1 AC5 4 GLY A 289 LEU A 400 TYR B 284 HOH B 446 SITE 1 AC6 4 TYR A 284 GLY B 289 LEU B 400 HOH B 436 SITE 1 AC7 5 ASP A 422 HOH A 551 HOH A 585 TYR B 345 SITE 2 AC7 5 HOH B 599 SITE 1 AC8 5 TYR A 345 HOH A 434 ASP B 422 LYS B 424 SITE 2 AC8 5 HOH B 447 SITE 1 AC9 6 TYR A 284 TRP A 286 HOH A 587 GLN B 288 SITE 2 AC9 6 ASN B 392 GLN B 394 CRYST1 106.081 106.081 70.351 90.00 90.00 90.00 P 42 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009427 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009427 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014214 0.00000