data_2R7B # _entry.id 2R7B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2R7B pdb_00002r7b 10.2210/pdb2r7b/pdb RCSB RCSB044514 ? ? WWPDB D_1000044514 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 4 'Structure model' 2 0 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' Advisory 7 4 'Structure model' 'Atomic model' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Non-polymer description' 11 4 'Structure model' 'Polymer sequence' 12 4 'Structure model' 'Source and taxonomy' 13 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site 7 4 'Structure model' atom_site 8 4 'Structure model' chem_comp 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' entity 12 4 'Structure model' entity_poly 13 4 'Structure model' entity_poly_seq 14 4 'Structure model' entity_src_gen 15 4 'Structure model' pdbx_entity_nonpoly 16 4 'Structure model' pdbx_nonpoly_scheme 17 4 'Structure model' pdbx_poly_seq_scheme 18 4 'Structure model' pdbx_struct_assembly_gen 19 4 'Structure model' pdbx_struct_mod_residue 20 4 'Structure model' pdbx_unobs_or_zero_occ_residues 21 4 'Structure model' pdbx_validate_torsion 22 4 'Structure model' struct_asym 23 4 'Structure model' struct_conn 24 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 4 'Structure model' '_atom_site.B_iso_or_equiv' 8 4 'Structure model' '_atom_site.Cartn_x' 9 4 'Structure model' '_atom_site.Cartn_y' 10 4 'Structure model' '_atom_site.Cartn_z' 11 4 'Structure model' '_atom_site.auth_atom_id' 12 4 'Structure model' '_atom_site.auth_comp_id' 13 4 'Structure model' '_atom_site.auth_seq_id' 14 4 'Structure model' '_atom_site.group_PDB' 15 4 'Structure model' '_atom_site.label_asym_id' 16 4 'Structure model' '_atom_site.label_atom_id' 17 4 'Structure model' '_atom_site.label_comp_id' 18 4 'Structure model' '_atom_site.label_entity_id' 19 4 'Structure model' '_atom_site.label_seq_id' 20 4 'Structure model' '_atom_site.type_symbol' 21 4 'Structure model' '_chem_comp.formula' 22 4 'Structure model' '_chem_comp.formula_weight' 23 4 'Structure model' '_chem_comp.id' 24 4 'Structure model' '_chem_comp.mon_nstd_flag' 25 4 'Structure model' '_chem_comp.name' 26 4 'Structure model' '_chem_comp.pdbx_synonyms' 27 4 'Structure model' '_chem_comp.type' 28 4 'Structure model' '_entity_poly.nstd_monomer' 29 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code' 30 4 'Structure model' '_entity_poly_seq.mon_id' 31 4 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 32 4 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 33 4 'Structure model' '_entity_src_gen.pdbx_seq_type' 34 4 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 35 4 'Structure model' '_pdbx_poly_seq_scheme.auth_seq_num' 36 4 'Structure model' '_pdbx_poly_seq_scheme.mon_id' 37 4 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 38 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 39 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 40 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 41 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 42 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 43 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 44 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 45 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 46 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 47 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 48 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 49 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 50 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 51 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 52 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 53 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 2R7B _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-09-07 _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Olland, A.M.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Discovery of Dibenzo[c,f][2,7]naphthyridines as Potent and Selective 3-Phosphoinositide-Dependent Kinase-1 Inhibitors.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 50 _citation.page_first 5547 _citation.page_last 5549 _citation.year 2007 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17941624 _citation.pdbx_database_id_DOI 10.1021/jm070851i # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gopalsamy, A.' 1 ? primary 'Shi, M.' 2 ? primary 'Boschelli, D.H.' 3 ? primary 'Williamson, R.' 4 ? primary 'Olland, A.M.' 5 ? primary 'Hu, Y.' 6 ? primary 'Krishnamurthy, G.' 7 ? primary 'Han, X.' 8 ? primary 'Arndt, K.' 9 ? primary 'Guo, B.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '3-phosphoinositide-dependent protein kinase 1' 35652.852 1 2.7.11.1 ? 'catalytic domain' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn '10,11-dimethoxy-4-methyldibenzo[c,f]-2,7-naphthyridine-3,6-diamine' 334.372 1 ? ? ? ? 4 water syn water 18.015 19 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name hPDK1 # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.2.7.11.1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK PENILLNEDMHIQITDFGTAKVLSPESKQARAN(SEP)FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR AGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT ; _entity_poly.pdbx_seq_one_letter_code_can ;GPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 '10,11-dimethoxy-4-methyldibenzo[c,f]-2,7-naphthyridine-3,6-diamine' 253 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ALA n 1 4 MET n 1 5 ASP n 1 6 GLY n 1 7 THR n 1 8 ALA n 1 9 ALA n 1 10 GLU n 1 11 PRO n 1 12 ARG n 1 13 PRO n 1 14 GLY n 1 15 ALA n 1 16 GLY n 1 17 SER n 1 18 LEU n 1 19 GLN n 1 20 HIS n 1 21 ALA n 1 22 GLN n 1 23 PRO n 1 24 PRO n 1 25 PRO n 1 26 GLN n 1 27 PRO n 1 28 ARG n 1 29 LYS n 1 30 LYS n 1 31 ARG n 1 32 PRO n 1 33 GLU n 1 34 ASP n 1 35 PHE n 1 36 LYS n 1 37 PHE n 1 38 GLY n 1 39 LYS n 1 40 ILE n 1 41 LEU n 1 42 GLY n 1 43 GLU n 1 44 GLY n 1 45 SER n 1 46 PHE n 1 47 SER n 1 48 THR n 1 49 VAL n 1 50 VAL n 1 51 LEU n 1 52 ALA n 1 53 ARG n 1 54 GLU n 1 55 LEU n 1 56 ALA n 1 57 THR n 1 58 SER n 1 59 ARG n 1 60 GLU n 1 61 TYR n 1 62 ALA n 1 63 ILE n 1 64 LYS n 1 65 ILE n 1 66 LEU n 1 67 GLU n 1 68 LYS n 1 69 ARG n 1 70 HIS n 1 71 ILE n 1 72 ILE n 1 73 LYS n 1 74 GLU n 1 75 ASN n 1 76 LYS n 1 77 VAL n 1 78 PRO n 1 79 TYR n 1 80 VAL n 1 81 THR n 1 82 ARG n 1 83 GLU n 1 84 ARG n 1 85 ASP n 1 86 VAL n 1 87 MET n 1 88 SER n 1 89 ARG n 1 90 LEU n 1 91 ASP n 1 92 HIS n 1 93 PRO n 1 94 PHE n 1 95 PHE n 1 96 VAL n 1 97 LYS n 1 98 LEU n 1 99 TYR n 1 100 PHE n 1 101 THR n 1 102 PHE n 1 103 GLN n 1 104 ASP n 1 105 ASP n 1 106 GLU n 1 107 LYS n 1 108 LEU n 1 109 TYR n 1 110 PHE n 1 111 GLY n 1 112 LEU n 1 113 SER n 1 114 TYR n 1 115 ALA n 1 116 LYS n 1 117 ASN n 1 118 GLY n 1 119 GLU n 1 120 LEU n 1 121 LEU n 1 122 LYS n 1 123 TYR n 1 124 ILE n 1 125 ARG n 1 126 LYS n 1 127 ILE n 1 128 GLY n 1 129 SER n 1 130 PHE n 1 131 ASP n 1 132 GLU n 1 133 THR n 1 134 CYS n 1 135 THR n 1 136 ARG n 1 137 PHE n 1 138 TYR n 1 139 THR n 1 140 ALA n 1 141 GLU n 1 142 ILE n 1 143 VAL n 1 144 SER n 1 145 ALA n 1 146 LEU n 1 147 GLU n 1 148 TYR n 1 149 LEU n 1 150 HIS n 1 151 GLY n 1 152 LYS n 1 153 GLY n 1 154 ILE n 1 155 ILE n 1 156 HIS n 1 157 ARG n 1 158 ASP n 1 159 LEU n 1 160 LYS n 1 161 PRO n 1 162 GLU n 1 163 ASN n 1 164 ILE n 1 165 LEU n 1 166 LEU n 1 167 ASN n 1 168 GLU n 1 169 ASP n 1 170 MET n 1 171 HIS n 1 172 ILE n 1 173 GLN n 1 174 ILE n 1 175 THR n 1 176 ASP n 1 177 PHE n 1 178 GLY n 1 179 THR n 1 180 ALA n 1 181 LYS n 1 182 VAL n 1 183 LEU n 1 184 SER n 1 185 PRO n 1 186 GLU n 1 187 SER n 1 188 LYS n 1 189 GLN n 1 190 ALA n 1 191 ARG n 1 192 ALA n 1 193 ASN n 1 194 SEP n 1 195 PHE n 1 196 VAL n 1 197 GLY n 1 198 THR n 1 199 ALA n 1 200 GLN n 1 201 TYR n 1 202 VAL n 1 203 SER n 1 204 PRO n 1 205 GLU n 1 206 LEU n 1 207 LEU n 1 208 THR n 1 209 GLU n 1 210 LYS n 1 211 SER n 1 212 ALA n 1 213 CYS n 1 214 LYS n 1 215 SER n 1 216 SER n 1 217 ASP n 1 218 LEU n 1 219 TRP n 1 220 ALA n 1 221 LEU n 1 222 GLY n 1 223 CYS n 1 224 ILE n 1 225 ILE n 1 226 TYR n 1 227 GLN n 1 228 LEU n 1 229 VAL n 1 230 ALA n 1 231 GLY n 1 232 LEU n 1 233 PRO n 1 234 PRO n 1 235 PHE n 1 236 ARG n 1 237 ALA n 1 238 GLY n 1 239 ASN n 1 240 GLU n 1 241 TYR n 1 242 LEU n 1 243 ILE n 1 244 PHE n 1 245 GLN n 1 246 LYS n 1 247 ILE n 1 248 ILE n 1 249 LYS n 1 250 LEU n 1 251 GLU n 1 252 TYR n 1 253 ASP n 1 254 PHE n 1 255 PRO n 1 256 GLU n 1 257 LYS n 1 258 PHE n 1 259 PHE n 1 260 PRO n 1 261 LYS n 1 262 ALA n 1 263 ARG n 1 264 ASP n 1 265 LEU n 1 266 VAL n 1 267 GLU n 1 268 LYS n 1 269 LEU n 1 270 LEU n 1 271 VAL n 1 272 LEU n 1 273 ASP n 1 274 ALA n 1 275 THR n 1 276 LYS n 1 277 ARG n 1 278 LEU n 1 279 GLY n 1 280 CYS n 1 281 GLU n 1 282 GLU n 1 283 MET n 1 284 GLU n 1 285 GLY n 1 286 TYR n 1 287 GLY n 1 288 PRO n 1 289 LEU n 1 290 LYS n 1 291 ALA n 1 292 HIS n 1 293 PRO n 1 294 PHE n 1 295 PHE n 1 296 GLU n 1 297 SER n 1 298 VAL n 1 299 THR n 1 300 TRP n 1 301 GLU n 1 302 ASN n 1 303 LEU n 1 304 HIS n 1 305 GLN n 1 306 GLN n 1 307 THR n 1 308 PRO n 1 309 PRO n 1 310 LYS n 1 311 LEU n 1 312 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 312 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PDPK1, PDK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 253 non-polymer . '10,11-dimethoxy-4-methyldibenzo[c,f]-2,7-naphthyridine-3,6-diamine' ? 'C19 H18 N4 O2' 334.372 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SEP 'L-peptide linking' n PHOSPHOSERINE PHOSPHONOSERINE 'C3 H8 N O6 P' 185.072 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 48 ? ? ? A . n A 1 2 PRO 2 49 ? ? ? A . n A 1 3 ALA 3 50 ? ? ? A . n A 1 4 MET 4 51 ? ? ? A . n A 1 5 ASP 5 52 ? ? ? A . n A 1 6 GLY 6 53 ? ? ? A . n A 1 7 THR 7 54 ? ? ? A . n A 1 8 ALA 8 55 ? ? ? A . n A 1 9 ALA 9 56 ? ? ? A . n A 1 10 GLU 10 57 ? ? ? A . n A 1 11 PRO 11 58 ? ? ? A . n A 1 12 ARG 12 59 ? ? ? A . n A 1 13 PRO 13 60 ? ? ? A . n A 1 14 GLY 14 61 ? ? ? A . n A 1 15 ALA 15 62 ? ? ? A . n A 1 16 GLY 16 63 ? ? ? A . n A 1 17 SER 17 64 ? ? ? A . n A 1 18 LEU 18 65 ? ? ? A . n A 1 19 GLN 19 66 ? ? ? A . n A 1 20 HIS 20 67 ? ? ? A . n A 1 21 ALA 21 68 ? ? ? A . n A 1 22 GLN 22 69 ? ? ? A . n A 1 23 PRO 23 70 ? ? ? A . n A 1 24 PRO 24 71 ? ? ? A . n A 1 25 PRO 25 72 ? ? ? A . n A 1 26 GLN 26 73 ? ? ? A . n A 1 27 PRO 27 74 ? ? ? A . n A 1 28 ARG 28 75 75 ARG ARG A . n A 1 29 LYS 29 76 76 LYS LYS A . n A 1 30 LYS 30 77 77 LYS LYS A . n A 1 31 ARG 31 78 78 ARG ARG A . n A 1 32 PRO 32 79 79 PRO PRO A . n A 1 33 GLU 33 80 80 GLU GLU A . n A 1 34 ASP 34 81 81 ASP ASP A . n A 1 35 PHE 35 82 82 PHE PHE A . n A 1 36 LYS 36 83 83 LYS LYS A . n A 1 37 PHE 37 84 84 PHE PHE A . n A 1 38 GLY 38 85 85 GLY GLY A . n A 1 39 LYS 39 86 86 LYS LYS A . n A 1 40 ILE 40 87 87 ILE ILE A . n A 1 41 LEU 41 88 88 LEU LEU A . n A 1 42 GLY 42 89 89 GLY GLY A . n A 1 43 GLU 43 90 90 GLU GLU A . n A 1 44 GLY 44 91 91 GLY GLY A . n A 1 45 SER 45 92 92 SER SER A . n A 1 46 PHE 46 93 93 PHE PHE A . n A 1 47 SER 47 94 94 SER SER A . n A 1 48 THR 48 95 95 THR THR A . n A 1 49 VAL 49 96 96 VAL VAL A . n A 1 50 VAL 50 97 97 VAL VAL A . n A 1 51 LEU 51 98 98 LEU LEU A . n A 1 52 ALA 52 99 99 ALA ALA A . n A 1 53 ARG 53 100 100 ARG ARG A . n A 1 54 GLU 54 101 101 GLU GLU A . n A 1 55 LEU 55 102 102 LEU LEU A . n A 1 56 ALA 56 103 103 ALA ALA A . n A 1 57 THR 57 104 104 THR THR A . n A 1 58 SER 58 105 105 SER SER A . n A 1 59 ARG 59 106 106 ARG ARG A . n A 1 60 GLU 60 107 107 GLU GLU A . n A 1 61 TYR 61 108 108 TYR TYR A . n A 1 62 ALA 62 109 109 ALA ALA A . n A 1 63 ILE 63 110 110 ILE ILE A . n A 1 64 LYS 64 111 111 LYS LYS A . n A 1 65 ILE 65 112 112 ILE ILE A . n A 1 66 LEU 66 113 113 LEU LEU A . n A 1 67 GLU 67 114 114 GLU GLU A . n A 1 68 LYS 68 115 115 LYS LYS A . n A 1 69 ARG 69 116 116 ARG ARG A . n A 1 70 HIS 70 117 117 HIS HIS A . n A 1 71 ILE 71 118 118 ILE ILE A . n A 1 72 ILE 72 119 119 ILE ILE A . n A 1 73 LYS 73 120 120 LYS LYS A . n A 1 74 GLU 74 121 121 GLU GLU A . n A 1 75 ASN 75 122 122 ASN ASN A . n A 1 76 LYS 76 123 123 LYS LYS A . n A 1 77 VAL 77 124 124 VAL VAL A . n A 1 78 PRO 78 125 125 PRO PRO A . n A 1 79 TYR 79 126 126 TYR TYR A . n A 1 80 VAL 80 127 127 VAL VAL A . n A 1 81 THR 81 128 128 THR THR A . n A 1 82 ARG 82 129 129 ARG ARG A . n A 1 83 GLU 83 130 130 GLU GLU A . n A 1 84 ARG 84 131 131 ARG ARG A . n A 1 85 ASP 85 132 132 ASP ASP A . n A 1 86 VAL 86 133 133 VAL VAL A . n A 1 87 MET 87 134 134 MET MET A . n A 1 88 SER 88 135 135 SER SER A . n A 1 89 ARG 89 136 136 ARG ARG A . n A 1 90 LEU 90 137 137 LEU LEU A . n A 1 91 ASP 91 138 138 ASP ASP A . n A 1 92 HIS 92 139 139 HIS HIS A . n A 1 93 PRO 93 140 140 PRO PRO A . n A 1 94 PHE 94 141 141 PHE PHE A . n A 1 95 PHE 95 142 142 PHE PHE A . n A 1 96 VAL 96 143 143 VAL VAL A . n A 1 97 LYS 97 144 144 LYS LYS A . n A 1 98 LEU 98 145 145 LEU LEU A . n A 1 99 TYR 99 146 146 TYR TYR A . n A 1 100 PHE 100 147 147 PHE PHE A . n A 1 101 THR 101 148 148 THR THR A . n A 1 102 PHE 102 149 149 PHE PHE A . n A 1 103 GLN 103 150 150 GLN GLN A . n A 1 104 ASP 104 151 151 ASP ASP A . n A 1 105 ASP 105 152 152 ASP ASP A . n A 1 106 GLU 106 153 153 GLU GLU A . n A 1 107 LYS 107 154 154 LYS LYS A . n A 1 108 LEU 108 155 155 LEU LEU A . n A 1 109 TYR 109 156 156 TYR TYR A . n A 1 110 PHE 110 157 157 PHE PHE A . n A 1 111 GLY 111 158 158 GLY GLY A . n A 1 112 LEU 112 159 159 LEU LEU A . n A 1 113 SER 113 160 160 SER SER A . n A 1 114 TYR 114 161 161 TYR TYR A . n A 1 115 ALA 115 162 162 ALA ALA A . n A 1 116 LYS 116 163 163 LYS LYS A . n A 1 117 ASN 117 164 164 ASN ASN A . n A 1 118 GLY 118 165 165 GLY GLY A . n A 1 119 GLU 119 166 166 GLU GLU A . n A 1 120 LEU 120 167 167 LEU LEU A . n A 1 121 LEU 121 168 168 LEU LEU A . n A 1 122 LYS 122 169 169 LYS LYS A . n A 1 123 TYR 123 170 170 TYR TYR A . n A 1 124 ILE 124 171 171 ILE ILE A . n A 1 125 ARG 125 172 172 ARG ARG A . n A 1 126 LYS 126 173 173 LYS LYS A . n A 1 127 ILE 127 174 174 ILE ILE A . n A 1 128 GLY 128 175 175 GLY GLY A . n A 1 129 SER 129 176 176 SER SER A . n A 1 130 PHE 130 177 177 PHE PHE A . n A 1 131 ASP 131 178 178 ASP ASP A . n A 1 132 GLU 132 179 179 GLU GLU A . n A 1 133 THR 133 180 180 THR THR A . n A 1 134 CYS 134 181 181 CYS CYS A . n A 1 135 THR 135 182 182 THR THR A . n A 1 136 ARG 136 183 183 ARG ARG A . n A 1 137 PHE 137 184 184 PHE PHE A . n A 1 138 TYR 138 185 185 TYR TYR A . n A 1 139 THR 139 186 186 THR THR A . n A 1 140 ALA 140 187 187 ALA ALA A . n A 1 141 GLU 141 188 188 GLU GLU A . n A 1 142 ILE 142 189 189 ILE ILE A . n A 1 143 VAL 143 190 190 VAL VAL A . n A 1 144 SER 144 191 191 SER SER A . n A 1 145 ALA 145 192 192 ALA ALA A . n A 1 146 LEU 146 193 193 LEU LEU A . n A 1 147 GLU 147 194 194 GLU GLU A . n A 1 148 TYR 148 195 195 TYR TYR A . n A 1 149 LEU 149 196 196 LEU LEU A . n A 1 150 HIS 150 197 197 HIS HIS A . n A 1 151 GLY 151 198 198 GLY GLY A . n A 1 152 LYS 152 199 199 LYS LYS A . n A 1 153 GLY 153 200 200 GLY GLY A . n A 1 154 ILE 154 201 201 ILE ILE A . n A 1 155 ILE 155 202 202 ILE ILE A . n A 1 156 HIS 156 203 203 HIS HIS A . n A 1 157 ARG 157 204 204 ARG ARG A . n A 1 158 ASP 158 205 205 ASP ASP A . n A 1 159 LEU 159 206 206 LEU LEU A . n A 1 160 LYS 160 207 207 LYS LYS A . n A 1 161 PRO 161 208 208 PRO PRO A . n A 1 162 GLU 162 209 209 GLU GLU A . n A 1 163 ASN 163 210 210 ASN ASN A . n A 1 164 ILE 164 211 211 ILE ILE A . n A 1 165 LEU 165 212 212 LEU LEU A . n A 1 166 LEU 166 213 213 LEU LEU A . n A 1 167 ASN 167 214 214 ASN ASN A . n A 1 168 GLU 168 215 215 GLU GLU A . n A 1 169 ASP 169 216 216 ASP ASP A . n A 1 170 MET 170 217 217 MET MET A . n A 1 171 HIS 171 218 218 HIS HIS A . n A 1 172 ILE 172 219 219 ILE ILE A . n A 1 173 GLN 173 220 220 GLN GLN A . n A 1 174 ILE 174 221 221 ILE ILE A . n A 1 175 THR 175 222 222 THR THR A . n A 1 176 ASP 176 223 223 ASP ASP A . n A 1 177 PHE 177 224 224 PHE PHE A . n A 1 178 GLY 178 225 225 GLY GLY A . n A 1 179 THR 179 226 226 THR THR A . n A 1 180 ALA 180 227 227 ALA ALA A . n A 1 181 LYS 181 228 228 LYS LYS A . n A 1 182 VAL 182 229 229 VAL VAL A . n A 1 183 LEU 183 230 230 LEU LEU A . n A 1 184 SER 184 231 ? ? ? A . n A 1 185 PRO 185 232 ? ? ? A . n A 1 186 GLU 186 233 ? ? ? A . n A 1 187 SER 187 234 ? ? ? A . n A 1 188 LYS 188 235 ? ? ? A . n A 1 189 GLN 189 236 ? ? ? A . n A 1 190 ALA 190 237 ? ? ? A . n A 1 191 ARG 191 238 ? ? ? A . n A 1 192 ALA 192 239 ? ? ? A . n A 1 193 ASN 193 240 ? ? ? A . n A 1 194 SEP 194 241 241 SEP PSE A . n A 1 195 PHE 195 242 242 PHE PHE A . n A 1 196 VAL 196 243 243 VAL VAL A . n A 1 197 GLY 197 244 244 GLY GLY A . n A 1 198 THR 198 245 245 THR THR A . n A 1 199 ALA 199 246 246 ALA ALA A . n A 1 200 GLN 200 247 247 GLN GLN A . n A 1 201 TYR 201 248 248 TYR TYR A . n A 1 202 VAL 202 249 249 VAL VAL A . n A 1 203 SER 203 250 250 SER SER A . n A 1 204 PRO 204 251 251 PRO PRO A . n A 1 205 GLU 205 252 252 GLU GLU A . n A 1 206 LEU 206 253 253 LEU LEU A . n A 1 207 LEU 207 254 254 LEU LEU A . n A 1 208 THR 208 255 255 THR THR A . n A 1 209 GLU 209 256 256 GLU GLU A . n A 1 210 LYS 210 257 257 LYS LYS A . n A 1 211 SER 211 258 258 SER SER A . n A 1 212 ALA 212 259 259 ALA ALA A . n A 1 213 CYS 213 260 260 CYS CYS A . n A 1 214 LYS 214 261 261 LYS LYS A . n A 1 215 SER 215 262 262 SER SER A . n A 1 216 SER 216 263 263 SER SER A . n A 1 217 ASP 217 264 264 ASP ASP A . n A 1 218 LEU 218 265 265 LEU LEU A . n A 1 219 TRP 219 266 266 TRP TRP A . n A 1 220 ALA 220 267 267 ALA ALA A . n A 1 221 LEU 221 268 268 LEU LEU A . n A 1 222 GLY 222 269 269 GLY GLY A . n A 1 223 CYS 223 270 270 CYS CYS A . n A 1 224 ILE 224 271 271 ILE ILE A . n A 1 225 ILE 225 272 272 ILE ILE A . n A 1 226 TYR 226 273 273 TYR TYR A . n A 1 227 GLN 227 274 274 GLN GLN A . n A 1 228 LEU 228 275 275 LEU LEU A . n A 1 229 VAL 229 276 276 VAL VAL A . n A 1 230 ALA 230 277 277 ALA ALA A . n A 1 231 GLY 231 278 278 GLY GLY A . n A 1 232 LEU 232 279 279 LEU LEU A . n A 1 233 PRO 233 280 280 PRO PRO A . n A 1 234 PRO 234 281 281 PRO PRO A . n A 1 235 PHE 235 282 282 PHE PHE A . n A 1 236 ARG 236 283 283 ARG ARG A . n A 1 237 ALA 237 284 284 ALA ALA A . n A 1 238 GLY 238 285 285 GLY GLY A . n A 1 239 ASN 239 286 286 ASN ASN A . n A 1 240 GLU 240 287 287 GLU GLU A . n A 1 241 TYR 241 288 288 TYR TYR A . n A 1 242 LEU 242 289 289 LEU LEU A . n A 1 243 ILE 243 290 290 ILE ILE A . n A 1 244 PHE 244 291 291 PHE PHE A . n A 1 245 GLN 245 292 292 GLN GLN A . n A 1 246 LYS 246 293 293 LYS LYS A . n A 1 247 ILE 247 294 294 ILE ILE A . n A 1 248 ILE 248 295 295 ILE ILE A . n A 1 249 LYS 249 296 296 LYS LYS A . n A 1 250 LEU 250 297 297 LEU LEU A . n A 1 251 GLU 251 298 298 GLU GLU A . n A 1 252 TYR 252 299 299 TYR TYR A . n A 1 253 ASP 253 300 300 ASP ASP A . n A 1 254 PHE 254 301 301 PHE PHE A . n A 1 255 PRO 255 302 302 PRO PRO A . n A 1 256 GLU 256 303 303 GLU GLU A . n A 1 257 LYS 257 304 304 LYS LYS A . n A 1 258 PHE 258 305 305 PHE PHE A . n A 1 259 PHE 259 306 306 PHE PHE A . n A 1 260 PRO 260 307 307 PRO PRO A . n A 1 261 LYS 261 308 308 LYS LYS A . n A 1 262 ALA 262 309 309 ALA ALA A . n A 1 263 ARG 263 310 310 ARG ARG A . n A 1 264 ASP 264 311 311 ASP ASP A . n A 1 265 LEU 265 312 312 LEU LEU A . n A 1 266 VAL 266 313 313 VAL VAL A . n A 1 267 GLU 267 314 314 GLU GLU A . n A 1 268 LYS 268 315 315 LYS LYS A . n A 1 269 LEU 269 316 316 LEU LEU A . n A 1 270 LEU 270 317 317 LEU LEU A . n A 1 271 VAL 271 318 318 VAL VAL A . n A 1 272 LEU 272 319 319 LEU LEU A . n A 1 273 ASP 273 320 320 ASP ASP A . n A 1 274 ALA 274 321 321 ALA ALA A . n A 1 275 THR 275 322 322 THR THR A . n A 1 276 LYS 276 323 323 LYS LYS A . n A 1 277 ARG 277 324 324 ARG ARG A . n A 1 278 LEU 278 325 325 LEU LEU A . n A 1 279 GLY 279 326 326 GLY GLY A . n A 1 280 CYS 280 327 327 CYS CYS A . n A 1 281 GLU 281 328 328 GLU GLU A . n A 1 282 GLU 282 329 329 GLU GLU A . n A 1 283 MET 283 330 330 MET MET A . n A 1 284 GLU 284 331 331 GLU GLU A . n A 1 285 GLY 285 332 332 GLY GLY A . n A 1 286 TYR 286 333 333 TYR TYR A . n A 1 287 GLY 287 334 334 GLY GLY A . n A 1 288 PRO 288 335 335 PRO PRO A . n A 1 289 LEU 289 336 336 LEU LEU A . n A 1 290 LYS 290 337 337 LYS LYS A . n A 1 291 ALA 291 338 338 ALA ALA A . n A 1 292 HIS 292 339 339 HIS HIS A . n A 1 293 PRO 293 340 340 PRO PRO A . n A 1 294 PHE 294 341 341 PHE PHE A . n A 1 295 PHE 295 342 342 PHE PHE A . n A 1 296 GLU 296 343 343 GLU GLU A . n A 1 297 SER 297 344 344 SER SER A . n A 1 298 VAL 298 345 345 VAL VAL A . n A 1 299 THR 299 346 346 THR THR A . n A 1 300 TRP 300 347 347 TRP TRP A . n A 1 301 GLU 301 348 348 GLU GLU A . n A 1 302 ASN 302 349 349 ASN ASN A . n A 1 303 LEU 303 350 350 LEU LEU A . n A 1 304 HIS 304 351 351 HIS HIS A . n A 1 305 GLN 305 352 352 GLN GLN A . n A 1 306 GLN 306 353 353 GLN GLN A . n A 1 307 THR 307 354 354 THR THR A . n A 1 308 PRO 308 355 355 PRO PRO A . n A 1 309 PRO 309 356 356 PRO PRO A . n A 1 310 LYS 310 357 357 LYS LYS A . n A 1 311 LEU 311 358 358 LEU LEU A . n A 1 312 THR 312 359 359 THR THR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 360 360 SO4 SO4 A . C 3 253 1 701 701 253 253 A . D 4 HOH 1 702 702 HOH HOH A . D 4 HOH 2 703 703 HOH HOH A . D 4 HOH 3 704 704 HOH HOH A . D 4 HOH 4 705 705 HOH HOH A . D 4 HOH 5 706 706 HOH HOH A . D 4 HOH 6 707 707 HOH HOH A . D 4 HOH 7 708 708 HOH HOH A . D 4 HOH 8 709 709 HOH HOH A . D 4 HOH 9 710 710 HOH HOH A . D 4 HOH 10 711 711 HOH HOH A . D 4 HOH 11 712 712 HOH HOH A . D 4 HOH 12 713 713 HOH HOH A . D 4 HOH 13 714 714 HOH HOH A . D 4 HOH 14 715 715 HOH HOH A . D 4 HOH 15 716 716 HOH HOH A . D 4 HOH 16 717 717 HOH HOH A . D 4 HOH 17 718 718 HOH HOH A . D 4 HOH 18 719 719 HOH HOH A . D 4 HOH 19 720 720 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 2R7B _cell.length_a 124.281 _cell.length_b 124.281 _cell.length_c 47.184 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2R7B _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 154 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 2R7B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.96 _exptl_crystal.density_percent_sol 58.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2R7B _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.60 _reflns.d_resolution_low 50. _reflns.number_all ? _reflns.number_obs 11431 _reflns.percent_possible_obs 91.3 _reflns.pdbx_Rmerge_I_obs 0.128 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 2R7B _refine.ls_d_res_high 2.70 _refine.ls_d_res_low 50. _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 11706 _refine.ls_number_reflns_obs 11431 _refine.ls_number_reflns_R_free 560 _refine.ls_percent_reflns_obs 97.7 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.2246 _refine.ls_R_factor_R_free 0.2498 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free 5. _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDK-1 + ATP (1UU3)' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2245 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 19 _refine_hist.number_atoms_total 2304 _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 50. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.00857 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.5525 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 2R7B _struct.title 'Crystal Structure of the Phosphoinositide-dependent Kinase-1 (PDK-1)Catalytic Domain bound to a dibenzonaphthyridine inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2R7B _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN, TRANSFERASE' _struct_keywords.text 'PDK1, dibenzonaphthyridine, inhibitor, SIGNALING PROTEIN, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PDPK1_HUMAN _struct_ref.pdbx_db_accession O15530 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GPAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLK PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT ; _struct_ref.pdbx_align_begin 48 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2R7B _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 312 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O15530 _struct_ref_seq.db_align_beg 48 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 359 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 48 _struct_ref_seq.pdbx_auth_seq_align_end 359 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 31 ? GLU A 33 ? ARG A 78 GLU A 80 5 ? 3 HELX_P HELX_P2 2 LYS A 68 ? GLU A 74 ? LYS A 115 GLU A 121 1 ? 7 HELX_P HELX_P3 3 LYS A 76 ? ARG A 89 ? LYS A 123 ARG A 136 1 ? 14 HELX_P HELX_P4 4 GLU A 119 ? ILE A 127 ? GLU A 166 ILE A 174 1 ? 9 HELX_P HELX_P5 5 ASP A 131 ? LYS A 152 ? ASP A 178 LYS A 199 1 ? 22 HELX_P HELX_P6 6 THR A 198 ? VAL A 202 ? THR A 245 VAL A 249 5 ? 5 HELX_P HELX_P7 7 SER A 203 ? GLU A 209 ? SER A 250 GLU A 256 1 ? 7 HELX_P HELX_P8 8 CYS A 213 ? GLY A 231 ? CYS A 260 GLY A 278 1 ? 19 HELX_P HELX_P9 9 ASN A 239 ? LEU A 250 ? ASN A 286 LEU A 297 1 ? 12 HELX_P HELX_P10 10 PHE A 259 ? LYS A 268 ? PHE A 306 LYS A 315 1 ? 10 HELX_P HELX_P11 11 CYS A 280 ? GLU A 284 ? CYS A 327 GLU A 331 5 ? 5 HELX_P HELX_P12 12 GLY A 285 ? HIS A 292 ? GLY A 332 HIS A 339 1 ? 8 HELX_P HELX_P13 13 PRO A 293 ? GLU A 296 ? PRO A 340 GLU A 343 5 ? 4 HELX_P HELX_P14 14 THR A 299 ? GLN A 306 ? THR A 346 GLN A 353 5 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id SEP _struct_conn.ptnr1_label_seq_id 194 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id PHE _struct_conn.ptnr2_label_seq_id 195 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SEP _struct_conn.ptnr1_auth_seq_id 241 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PHE _struct_conn.ptnr2_auth_seq_id 242 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.334 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 35 ? GLU A 43 ? PHE A 82 GLU A 90 A 2 THR A 48 ? GLU A 54 ? THR A 95 GLU A 101 A 3 GLU A 60 ? GLU A 67 ? GLU A 107 GLU A 114 A 4 LYS A 107 ? SER A 113 ? LYS A 154 SER A 160 A 5 LEU A 98 ? GLN A 103 ? LEU A 145 GLN A 150 B 1 ILE A 154 ? ILE A 155 ? ILE A 201 ILE A 202 B 2 LYS A 181 ? VAL A 182 ? LYS A 228 VAL A 229 C 1 ILE A 164 ? LEU A 166 ? ILE A 211 LEU A 213 C 2 ILE A 172 ? ILE A 174 ? ILE A 219 ILE A 221 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 41 ? N LEU A 88 O VAL A 49 ? O VAL A 96 A 2 3 N THR A 48 ? N THR A 95 O ILE A 65 ? O ILE A 112 A 3 4 N ALA A 62 ? N ALA A 109 O LEU A 112 ? O LEU A 159 A 4 5 O GLY A 111 ? O GLY A 158 N TYR A 99 ? N TYR A 146 B 1 2 N ILE A 155 ? N ILE A 202 O LYS A 181 ? O LYS A 228 C 1 2 N LEU A 165 ? N LEU A 212 O GLN A 173 ? O GLN A 220 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 360 ? 4 'BINDING SITE FOR RESIDUE SO4 A 360' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE PSE A 361' AC3 Software A 253 701 ? 9 'BINDING SITE FOR RESIDUE 253 A 701' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLY A 44 ? GLY A 91 . ? 1_555 ? 2 AC1 4 SER A 45 ? SER A 92 . ? 1_555 ? 3 AC1 4 PHE A 46 ? PHE A 93 . ? 1_555 ? 4 AC1 4 SER A 47 ? SER A 94 . ? 1_555 ? 5 AC2 6 TYR A 79 ? TYR A 126 . ? 1_555 ? 6 AC2 6 ARG A 82 ? ARG A 129 . ? 1_555 ? 7 AC2 6 ARG A 157 ? ARG A 204 . ? 1_555 ? 8 AC2 6 LYS A 181 ? LYS A 228 . ? 1_555 ? 9 AC2 6 PHE A 195 ? PHE A 242 . ? 1_555 ? 10 AC2 6 LYS A 210 ? LYS A 257 . ? 1_555 ? 11 AC3 9 ALA A 62 ? ALA A 109 . ? 1_555 ? 12 AC3 9 LEU A 112 ? LEU A 159 . ? 1_555 ? 13 AC3 9 SER A 113 ? SER A 160 . ? 1_555 ? 14 AC3 9 TYR A 114 ? TYR A 161 . ? 1_555 ? 15 AC3 9 ALA A 115 ? ALA A 162 . ? 1_555 ? 16 AC3 9 LYS A 116 ? LYS A 163 . ? 1_555 ? 17 AC3 9 GLY A 118 ? GLY A 165 . ? 1_555 ? 18 AC3 9 LEU A 165 ? LEU A 212 . ? 1_555 ? 19 AC3 9 THR A 175 ? THR A 222 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A SER 94 ? ? CA A SER 94 ? ? CB A SER 94 ? ? 99.72 110.50 -10.78 1.50 N 2 1 N A SER 160 ? ? CA A SER 160 ? ? CB A SER 160 ? ? 101.25 110.50 -9.25 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 105 ? ? 81.44 8.44 2 1 ASP A 151 ? ? -112.77 -160.92 3 1 ASP A 205 ? ? -167.68 40.82 4 1 ASP A 223 ? ? 77.82 81.49 5 1 PHE A 242 ? ? 25.19 -152.48 6 1 VAL A 243 ? ? 148.51 113.35 7 1 ALA A 259 ? ? -167.82 116.80 8 1 PHE A 305 ? ? -25.60 125.75 9 1 GLU A 331 ? ? 70.46 33.69 10 1 PRO A 340 ? ? -39.90 -32.84 11 1 ASN A 349 ? ? -153.76 35.28 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id SEP _pdbx_struct_mod_residue.label_seq_id 194 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id SEP _pdbx_struct_mod_residue.auth_seq_id 241 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id SER _pdbx_struct_mod_residue.details 'modified residue' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 48 ? A GLY 1 2 1 Y 1 A PRO 49 ? A PRO 2 3 1 Y 1 A ALA 50 ? A ALA 3 4 1 Y 1 A MET 51 ? A MET 4 5 1 Y 1 A ASP 52 ? A ASP 5 6 1 Y 1 A GLY 53 ? A GLY 6 7 1 Y 1 A THR 54 ? A THR 7 8 1 Y 1 A ALA 55 ? A ALA 8 9 1 Y 1 A ALA 56 ? A ALA 9 10 1 Y 1 A GLU 57 ? A GLU 10 11 1 Y 1 A PRO 58 ? A PRO 11 12 1 Y 1 A ARG 59 ? A ARG 12 13 1 Y 1 A PRO 60 ? A PRO 13 14 1 Y 1 A GLY 61 ? A GLY 14 15 1 Y 1 A ALA 62 ? A ALA 15 16 1 Y 1 A GLY 63 ? A GLY 16 17 1 Y 1 A SER 64 ? A SER 17 18 1 Y 1 A LEU 65 ? A LEU 18 19 1 Y 1 A GLN 66 ? A GLN 19 20 1 Y 1 A HIS 67 ? A HIS 20 21 1 Y 1 A ALA 68 ? A ALA 21 22 1 Y 1 A GLN 69 ? A GLN 22 23 1 Y 1 A PRO 70 ? A PRO 23 24 1 Y 1 A PRO 71 ? A PRO 24 25 1 Y 1 A PRO 72 ? A PRO 25 26 1 Y 1 A GLN 73 ? A GLN 26 27 1 Y 1 A PRO 74 ? A PRO 27 28 1 Y 1 A SER 231 ? A SER 184 29 1 Y 1 A PRO 232 ? A PRO 185 30 1 Y 1 A GLU 233 ? A GLU 186 31 1 Y 1 A SER 234 ? A SER 187 32 1 Y 1 A LYS 235 ? A LYS 188 33 1 Y 1 A GLN 236 ? A GLN 189 34 1 Y 1 A ALA 237 ? A ALA 190 35 1 Y 1 A ARG 238 ? A ARG 191 36 1 Y 1 A ALA 239 ? A ALA 192 37 1 Y 1 A ASN 240 ? A ASN 193 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 253 C1 C N N 1 253 O2 O N N 2 253 C3 C Y N 3 253 C23 C Y N 4 253 O24 O N N 5 253 C25 C N N 6 253 C22 C Y N 7 253 C21 C Y N 8 253 C11 C Y N 9 253 C12 C Y N 10 253 C19 C Y N 11 253 N20 N Y N 12 253 C17 C Y N 13 253 C18 C N N 14 253 C15 C Y N 15 253 N16 N N N 16 253 C14 C Y N 17 253 C13 C Y N 18 253 C8 C Y N 19 253 C9 C Y N 20 253 N1 N N N 21 253 C7 C Y N 22 253 N6 N Y N 23 253 C5 C Y N 24 253 C4 C Y N 25 253 H11 H N N 26 253 H12 H N N 27 253 H13A H N N 28 253 H251 H N N 29 253 H252 H N N 30 253 H253 H N N 31 253 H22 H N N 32 253 H181 H N N 33 253 H182 H N N 34 253 H183 H N N 35 253 H161 H N N 36 253 H162 H N N 37 253 H14 H N N 38 253 H13 H N N 39 253 HN11 H N N 40 253 HN12 H N N 41 253 H7 H N N 42 253 H4 H N N 43 ALA N N N N 44 ALA CA C N S 45 ALA C C N N 46 ALA O O N N 47 ALA CB C N N 48 ALA OXT O N N 49 ALA H H N N 50 ALA H2 H N N 51 ALA HA H N N 52 ALA HB1 H N N 53 ALA HB2 H N N 54 ALA HB3 H N N 55 ALA HXT H N N 56 ARG N N N N 57 ARG CA C N S 58 ARG C C N N 59 ARG O O N N 60 ARG CB C N N 61 ARG CG C N N 62 ARG CD C N N 63 ARG NE N N N 64 ARG CZ C N N 65 ARG NH1 N N N 66 ARG NH2 N N N 67 ARG OXT O N N 68 ARG H H N N 69 ARG H2 H N N 70 ARG HA H N N 71 ARG HB2 H N N 72 ARG HB3 H N N 73 ARG HG2 H N N 74 ARG HG3 H N N 75 ARG HD2 H N N 76 ARG HD3 H N N 77 ARG HE H N N 78 ARG HH11 H N N 79 ARG HH12 H N N 80 ARG HH21 H N N 81 ARG HH22 H N N 82 ARG HXT H N N 83 ASN N N N N 84 ASN CA C N S 85 ASN C C N N 86 ASN O O N N 87 ASN CB C N N 88 ASN CG C N N 89 ASN OD1 O N N 90 ASN ND2 N N N 91 ASN OXT O N N 92 ASN H H N N 93 ASN H2 H N N 94 ASN HA H N N 95 ASN HB2 H N N 96 ASN HB3 H N N 97 ASN HD21 H N N 98 ASN HD22 H N N 99 ASN HXT H N N 100 ASP N N N N 101 ASP CA C N S 102 ASP C C N N 103 ASP O O N N 104 ASP CB C N N 105 ASP CG C N N 106 ASP OD1 O N N 107 ASP OD2 O N N 108 ASP OXT O N N 109 ASP H H N N 110 ASP H2 H N N 111 ASP HA H N N 112 ASP HB2 H N N 113 ASP HB3 H N N 114 ASP HD2 H N N 115 ASP HXT H N N 116 CYS N N N N 117 CYS CA C N R 118 CYS C C N N 119 CYS O O N N 120 CYS CB C N N 121 CYS SG S N N 122 CYS OXT O N N 123 CYS H H N N 124 CYS H2 H N N 125 CYS HA H N N 126 CYS HB2 H N N 127 CYS HB3 H N N 128 CYS HG H N N 129 CYS HXT H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 PHE N N N N 293 PHE CA C N S 294 PHE C C N N 295 PHE O O N N 296 PHE CB C N N 297 PHE CG C Y N 298 PHE CD1 C Y N 299 PHE CD2 C Y N 300 PHE CE1 C Y N 301 PHE CE2 C Y N 302 PHE CZ C Y N 303 PHE OXT O N N 304 PHE H H N N 305 PHE H2 H N N 306 PHE HA H N N 307 PHE HB2 H N N 308 PHE HB3 H N N 309 PHE HD1 H N N 310 PHE HD2 H N N 311 PHE HE1 H N N 312 PHE HE2 H N N 313 PHE HZ H N N 314 PHE HXT H N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SEP N N N N 333 SEP CA C N S 334 SEP CB C N N 335 SEP OG O N N 336 SEP C C N N 337 SEP O O N N 338 SEP OXT O N N 339 SEP P P N N 340 SEP O1P O N N 341 SEP O2P O N N 342 SEP O3P O N N 343 SEP H H N N 344 SEP H2 H N N 345 SEP HA H N N 346 SEP HB2 H N N 347 SEP HB3 H N N 348 SEP HXT H N N 349 SEP HOP2 H N N 350 SEP HOP3 H N N 351 SER N N N N 352 SER CA C N S 353 SER C C N N 354 SER O O N N 355 SER CB C N N 356 SER OG O N N 357 SER OXT O N N 358 SER H H N N 359 SER H2 H N N 360 SER HA H N N 361 SER HB2 H N N 362 SER HB3 H N N 363 SER HG H N N 364 SER HXT H N N 365 SO4 S S N N 366 SO4 O1 O N N 367 SO4 O2 O N N 368 SO4 O3 O N N 369 SO4 O4 O N N 370 THR N N N N 371 THR CA C N S 372 THR C C N N 373 THR O O N N 374 THR CB C N R 375 THR OG1 O N N 376 THR CG2 C N N 377 THR OXT O N N 378 THR H H N N 379 THR H2 H N N 380 THR HA H N N 381 THR HB H N N 382 THR HG1 H N N 383 THR HG21 H N N 384 THR HG22 H N N 385 THR HG23 H N N 386 THR HXT H N N 387 TRP N N N N 388 TRP CA C N S 389 TRP C C N N 390 TRP O O N N 391 TRP CB C N N 392 TRP CG C Y N 393 TRP CD1 C Y N 394 TRP CD2 C Y N 395 TRP NE1 N Y N 396 TRP CE2 C Y N 397 TRP CE3 C Y N 398 TRP CZ2 C Y N 399 TRP CZ3 C Y N 400 TRP CH2 C Y N 401 TRP OXT O N N 402 TRP H H N N 403 TRP H2 H N N 404 TRP HA H N N 405 TRP HB2 H N N 406 TRP HB3 H N N 407 TRP HD1 H N N 408 TRP HE1 H N N 409 TRP HE3 H N N 410 TRP HZ2 H N N 411 TRP HZ3 H N N 412 TRP HH2 H N N 413 TRP HXT H N N 414 TYR N N N N 415 TYR CA C N S 416 TYR C C N N 417 TYR O O N N 418 TYR CB C N N 419 TYR CG C Y N 420 TYR CD1 C Y N 421 TYR CD2 C Y N 422 TYR CE1 C Y N 423 TYR CE2 C Y N 424 TYR CZ C Y N 425 TYR OH O N N 426 TYR OXT O N N 427 TYR H H N N 428 TYR H2 H N N 429 TYR HA H N N 430 TYR HB2 H N N 431 TYR HB3 H N N 432 TYR HD1 H N N 433 TYR HD2 H N N 434 TYR HE1 H N N 435 TYR HE2 H N N 436 TYR HH H N N 437 TYR HXT H N N 438 VAL N N N N 439 VAL CA C N S 440 VAL C C N N 441 VAL O O N N 442 VAL CB C N N 443 VAL CG1 C N N 444 VAL CG2 C N N 445 VAL OXT O N N 446 VAL H H N N 447 VAL H2 H N N 448 VAL HA H N N 449 VAL HB H N N 450 VAL HG11 H N N 451 VAL HG12 H N N 452 VAL HG13 H N N 453 VAL HG21 H N N 454 VAL HG22 H N N 455 VAL HG23 H N N 456 VAL HXT H N N 457 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 253 N1 C9 sing N N 1 253 C18 C17 sing N N 2 253 N20 C9 doub Y N 3 253 N20 C19 sing Y N 4 253 C9 C8 sing Y N 5 253 C17 C19 doub Y N 6 253 C17 C15 sing Y N 7 253 C19 C12 sing Y N 8 253 C8 C7 doub Y N 9 253 C8 C11 sing Y N 10 253 C7 N6 sing Y N 11 253 N16 C15 sing N N 12 253 C15 C14 doub Y N 13 253 N6 C5 doub Y N 14 253 C12 C11 sing Y N 15 253 C12 C13 doub Y N 16 253 C11 C21 doub Y N 17 253 C5 C21 sing Y N 18 253 C5 C4 sing Y N 19 253 C14 C13 sing Y N 20 253 C21 C22 sing Y N 21 253 C4 C3 doub Y N 22 253 C22 C23 doub Y N 23 253 C25 O24 sing N N 24 253 C3 C23 sing Y N 25 253 C3 O2 sing N N 26 253 C23 O24 sing N N 27 253 O2 C1 sing N N 28 253 C1 H11 sing N N 29 253 C1 H12 sing N N 30 253 C1 H13A sing N N 31 253 C25 H251 sing N N 32 253 C25 H252 sing N N 33 253 C25 H253 sing N N 34 253 C22 H22 sing N N 35 253 C18 H181 sing N N 36 253 C18 H182 sing N N 37 253 C18 H183 sing N N 38 253 N16 H161 sing N N 39 253 N16 H162 sing N N 40 253 C14 H14 sing N N 41 253 C13 H13 sing N N 42 253 N1 HN11 sing N N 43 253 N1 HN12 sing N N 44 253 C7 H7 sing N N 45 253 C4 H4 sing N N 46 ALA N CA sing N N 47 ALA N H sing N N 48 ALA N H2 sing N N 49 ALA CA C sing N N 50 ALA CA CB sing N N 51 ALA CA HA sing N N 52 ALA C O doub N N 53 ALA C OXT sing N N 54 ALA CB HB1 sing N N 55 ALA CB HB2 sing N N 56 ALA CB HB3 sing N N 57 ALA OXT HXT sing N N 58 ARG N CA sing N N 59 ARG N H sing N N 60 ARG N H2 sing N N 61 ARG CA C sing N N 62 ARG CA CB sing N N 63 ARG CA HA sing N N 64 ARG C O doub N N 65 ARG C OXT sing N N 66 ARG CB CG sing N N 67 ARG CB HB2 sing N N 68 ARG CB HB3 sing N N 69 ARG CG CD sing N N 70 ARG CG HG2 sing N N 71 ARG CG HG3 sing N N 72 ARG CD NE sing N N 73 ARG CD HD2 sing N N 74 ARG CD HD3 sing N N 75 ARG NE CZ sing N N 76 ARG NE HE sing N N 77 ARG CZ NH1 sing N N 78 ARG CZ NH2 doub N N 79 ARG NH1 HH11 sing N N 80 ARG NH1 HH12 sing N N 81 ARG NH2 HH21 sing N N 82 ARG NH2 HH22 sing N N 83 ARG OXT HXT sing N N 84 ASN N CA sing N N 85 ASN N H sing N N 86 ASN N H2 sing N N 87 ASN CA C sing N N 88 ASN CA CB sing N N 89 ASN CA HA sing N N 90 ASN C O doub N N 91 ASN C OXT sing N N 92 ASN CB CG sing N N 93 ASN CB HB2 sing N N 94 ASN CB HB3 sing N N 95 ASN CG OD1 doub N N 96 ASN CG ND2 sing N N 97 ASN ND2 HD21 sing N N 98 ASN ND2 HD22 sing N N 99 ASN OXT HXT sing N N 100 ASP N CA sing N N 101 ASP N H sing N N 102 ASP N H2 sing N N 103 ASP CA C sing N N 104 ASP CA CB sing N N 105 ASP CA HA sing N N 106 ASP C O doub N N 107 ASP C OXT sing N N 108 ASP CB CG sing N N 109 ASP CB HB2 sing N N 110 ASP CB HB3 sing N N 111 ASP CG OD1 doub N N 112 ASP CG OD2 sing N N 113 ASP OD2 HD2 sing N N 114 ASP OXT HXT sing N N 115 CYS N CA sing N N 116 CYS N H sing N N 117 CYS N H2 sing N N 118 CYS CA C sing N N 119 CYS CA CB sing N N 120 CYS CA HA sing N N 121 CYS C O doub N N 122 CYS C OXT sing N N 123 CYS CB SG sing N N 124 CYS CB HB2 sing N N 125 CYS CB HB3 sing N N 126 CYS SG HG sing N N 127 CYS OXT HXT sing N N 128 GLN N CA sing N N 129 GLN N H sing N N 130 GLN N H2 sing N N 131 GLN CA C sing N N 132 GLN CA CB sing N N 133 GLN CA HA sing N N 134 GLN C O doub N N 135 GLN C OXT sing N N 136 GLN CB CG sing N N 137 GLN CB HB2 sing N N 138 GLN CB HB3 sing N N 139 GLN CG CD sing N N 140 GLN CG HG2 sing N N 141 GLN CG HG3 sing N N 142 GLN CD OE1 doub N N 143 GLN CD NE2 sing N N 144 GLN NE2 HE21 sing N N 145 GLN NE2 HE22 sing N N 146 GLN OXT HXT sing N N 147 GLU N CA sing N N 148 GLU N H sing N N 149 GLU N H2 sing N N 150 GLU CA C sing N N 151 GLU CA CB sing N N 152 GLU CA HA sing N N 153 GLU C O doub N N 154 GLU C OXT sing N N 155 GLU CB CG sing N N 156 GLU CB HB2 sing N N 157 GLU CB HB3 sing N N 158 GLU CG CD sing N N 159 GLU CG HG2 sing N N 160 GLU CG HG3 sing N N 161 GLU CD OE1 doub N N 162 GLU CD OE2 sing N N 163 GLU OE2 HE2 sing N N 164 GLU OXT HXT sing N N 165 GLY N CA sing N N 166 GLY N H sing N N 167 GLY N H2 sing N N 168 GLY CA C sing N N 169 GLY CA HA2 sing N N 170 GLY CA HA3 sing N N 171 GLY C O doub N N 172 GLY C OXT sing N N 173 GLY OXT HXT sing N N 174 HIS N CA sing N N 175 HIS N H sing N N 176 HIS N H2 sing N N 177 HIS CA C sing N N 178 HIS CA CB sing N N 179 HIS CA HA sing N N 180 HIS C O doub N N 181 HIS C OXT sing N N 182 HIS CB CG sing N N 183 HIS CB HB2 sing N N 184 HIS CB HB3 sing N N 185 HIS CG ND1 sing Y N 186 HIS CG CD2 doub Y N 187 HIS ND1 CE1 doub Y N 188 HIS ND1 HD1 sing N N 189 HIS CD2 NE2 sing Y N 190 HIS CD2 HD2 sing N N 191 HIS CE1 NE2 sing Y N 192 HIS CE1 HE1 sing N N 193 HIS NE2 HE2 sing N N 194 HIS OXT HXT sing N N 195 HOH O H1 sing N N 196 HOH O H2 sing N N 197 ILE N CA sing N N 198 ILE N H sing N N 199 ILE N H2 sing N N 200 ILE CA C sing N N 201 ILE CA CB sing N N 202 ILE CA HA sing N N 203 ILE C O doub N N 204 ILE C OXT sing N N 205 ILE CB CG1 sing N N 206 ILE CB CG2 sing N N 207 ILE CB HB sing N N 208 ILE CG1 CD1 sing N N 209 ILE CG1 HG12 sing N N 210 ILE CG1 HG13 sing N N 211 ILE CG2 HG21 sing N N 212 ILE CG2 HG22 sing N N 213 ILE CG2 HG23 sing N N 214 ILE CD1 HD11 sing N N 215 ILE CD1 HD12 sing N N 216 ILE CD1 HD13 sing N N 217 ILE OXT HXT sing N N 218 LEU N CA sing N N 219 LEU N H sing N N 220 LEU N H2 sing N N 221 LEU CA C sing N N 222 LEU CA CB sing N N 223 LEU CA HA sing N N 224 LEU C O doub N N 225 LEU C OXT sing N N 226 LEU CB CG sing N N 227 LEU CB HB2 sing N N 228 LEU CB HB3 sing N N 229 LEU CG CD1 sing N N 230 LEU CG CD2 sing N N 231 LEU CG HG sing N N 232 LEU CD1 HD11 sing N N 233 LEU CD1 HD12 sing N N 234 LEU CD1 HD13 sing N N 235 LEU CD2 HD21 sing N N 236 LEU CD2 HD22 sing N N 237 LEU CD2 HD23 sing N N 238 LEU OXT HXT sing N N 239 LYS N CA sing N N 240 LYS N H sing N N 241 LYS N H2 sing N N 242 LYS CA C sing N N 243 LYS CA CB sing N N 244 LYS CA HA sing N N 245 LYS C O doub N N 246 LYS C OXT sing N N 247 LYS CB CG sing N N 248 LYS CB HB2 sing N N 249 LYS CB HB3 sing N N 250 LYS CG CD sing N N 251 LYS CG HG2 sing N N 252 LYS CG HG3 sing N N 253 LYS CD CE sing N N 254 LYS CD HD2 sing N N 255 LYS CD HD3 sing N N 256 LYS CE NZ sing N N 257 LYS CE HE2 sing N N 258 LYS CE HE3 sing N N 259 LYS NZ HZ1 sing N N 260 LYS NZ HZ2 sing N N 261 LYS NZ HZ3 sing N N 262 LYS OXT HXT sing N N 263 MET N CA sing N N 264 MET N H sing N N 265 MET N H2 sing N N 266 MET CA C sing N N 267 MET CA CB sing N N 268 MET CA HA sing N N 269 MET C O doub N N 270 MET C OXT sing N N 271 MET CB CG sing N N 272 MET CB HB2 sing N N 273 MET CB HB3 sing N N 274 MET CG SD sing N N 275 MET CG HG2 sing N N 276 MET CG HG3 sing N N 277 MET SD CE sing N N 278 MET CE HE1 sing N N 279 MET CE HE2 sing N N 280 MET CE HE3 sing N N 281 MET OXT HXT sing N N 282 PHE N CA sing N N 283 PHE N H sing N N 284 PHE N H2 sing N N 285 PHE CA C sing N N 286 PHE CA CB sing N N 287 PHE CA HA sing N N 288 PHE C O doub N N 289 PHE C OXT sing N N 290 PHE CB CG sing N N 291 PHE CB HB2 sing N N 292 PHE CB HB3 sing N N 293 PHE CG CD1 doub Y N 294 PHE CG CD2 sing Y N 295 PHE CD1 CE1 sing Y N 296 PHE CD1 HD1 sing N N 297 PHE CD2 CE2 doub Y N 298 PHE CD2 HD2 sing N N 299 PHE CE1 CZ doub Y N 300 PHE CE1 HE1 sing N N 301 PHE CE2 CZ sing Y N 302 PHE CE2 HE2 sing N N 303 PHE CZ HZ sing N N 304 PHE OXT HXT sing N N 305 PRO N CA sing N N 306 PRO N CD sing N N 307 PRO N H sing N N 308 PRO CA C sing N N 309 PRO CA CB sing N N 310 PRO CA HA sing N N 311 PRO C O doub N N 312 PRO C OXT sing N N 313 PRO CB CG sing N N 314 PRO CB HB2 sing N N 315 PRO CB HB3 sing N N 316 PRO CG CD sing N N 317 PRO CG HG2 sing N N 318 PRO CG HG3 sing N N 319 PRO CD HD2 sing N N 320 PRO CD HD3 sing N N 321 PRO OXT HXT sing N N 322 SEP N CA sing N N 323 SEP N H sing N N 324 SEP N H2 sing N N 325 SEP CA CB sing N N 326 SEP CA C sing N N 327 SEP CA HA sing N N 328 SEP CB OG sing N N 329 SEP CB HB2 sing N N 330 SEP CB HB3 sing N N 331 SEP OG P sing N N 332 SEP C O doub N N 333 SEP C OXT sing N N 334 SEP OXT HXT sing N N 335 SEP P O1P doub N N 336 SEP P O2P sing N N 337 SEP P O3P sing N N 338 SEP O2P HOP2 sing N N 339 SEP O3P HOP3 sing N N 340 SER N CA sing N N 341 SER N H sing N N 342 SER N H2 sing N N 343 SER CA C sing N N 344 SER CA CB sing N N 345 SER CA HA sing N N 346 SER C O doub N N 347 SER C OXT sing N N 348 SER CB OG sing N N 349 SER CB HB2 sing N N 350 SER CB HB3 sing N N 351 SER OG HG sing N N 352 SER OXT HXT sing N N 353 SO4 S O1 doub N N 354 SO4 S O2 doub N N 355 SO4 S O3 sing N N 356 SO4 S O4 sing N N 357 THR N CA sing N N 358 THR N H sing N N 359 THR N H2 sing N N 360 THR CA C sing N N 361 THR CA CB sing N N 362 THR CA HA sing N N 363 THR C O doub N N 364 THR C OXT sing N N 365 THR CB OG1 sing N N 366 THR CB CG2 sing N N 367 THR CB HB sing N N 368 THR OG1 HG1 sing N N 369 THR CG2 HG21 sing N N 370 THR CG2 HG22 sing N N 371 THR CG2 HG23 sing N N 372 THR OXT HXT sing N N 373 TRP N CA sing N N 374 TRP N H sing N N 375 TRP N H2 sing N N 376 TRP CA C sing N N 377 TRP CA CB sing N N 378 TRP CA HA sing N N 379 TRP C O doub N N 380 TRP C OXT sing N N 381 TRP CB CG sing N N 382 TRP CB HB2 sing N N 383 TRP CB HB3 sing N N 384 TRP CG CD1 doub Y N 385 TRP CG CD2 sing Y N 386 TRP CD1 NE1 sing Y N 387 TRP CD1 HD1 sing N N 388 TRP CD2 CE2 doub Y N 389 TRP CD2 CE3 sing Y N 390 TRP NE1 CE2 sing Y N 391 TRP NE1 HE1 sing N N 392 TRP CE2 CZ2 sing Y N 393 TRP CE3 CZ3 doub Y N 394 TRP CE3 HE3 sing N N 395 TRP CZ2 CH2 doub Y N 396 TRP CZ2 HZ2 sing N N 397 TRP CZ3 CH2 sing Y N 398 TRP CZ3 HZ3 sing N N 399 TRP CH2 HH2 sing N N 400 TRP OXT HXT sing N N 401 TYR N CA sing N N 402 TYR N H sing N N 403 TYR N H2 sing N N 404 TYR CA C sing N N 405 TYR CA CB sing N N 406 TYR CA HA sing N N 407 TYR C O doub N N 408 TYR C OXT sing N N 409 TYR CB CG sing N N 410 TYR CB HB2 sing N N 411 TYR CB HB3 sing N N 412 TYR CG CD1 doub Y N 413 TYR CG CD2 sing Y N 414 TYR CD1 CE1 sing Y N 415 TYR CD1 HD1 sing N N 416 TYR CD2 CE2 doub Y N 417 TYR CD2 HD2 sing N N 418 TYR CE1 CZ doub Y N 419 TYR CE1 HE1 sing N N 420 TYR CE2 CZ sing Y N 421 TYR CE2 HE2 sing N N 422 TYR CZ OH sing N N 423 TYR OH HH sing N N 424 TYR OXT HXT sing N N 425 VAL N CA sing N N 426 VAL N H sing N N 427 VAL N H2 sing N N 428 VAL CA C sing N N 429 VAL CA CB sing N N 430 VAL CA HA sing N N 431 VAL C O doub N N 432 VAL C OXT sing N N 433 VAL CB CG1 sing N N 434 VAL CB CG2 sing N N 435 VAL CB HB sing N N 436 VAL CG1 HG11 sing N N 437 VAL CG1 HG12 sing N N 438 VAL CG1 HG13 sing N N 439 VAL CG2 HG21 sing N N 440 VAL CG2 HG22 sing N N 441 VAL CG2 HG23 sing N N 442 VAL OXT HXT sing N N 443 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1UU3 _pdbx_initial_refinement_model.details 'PDK-1 + ATP (1UU3)' # _atom_sites.entry_id 2R7B _atom_sites.fract_transf_matrix[1][1] 0.008046 _atom_sites.fract_transf_matrix[1][2] 0.004646 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009291 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021194 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_