HEADER TOXIN 10-SEP-07 2R8D TITLE THE STRUCTURE OF TRANSPORTER ASSOCIATED DOMAIN CORC_HLYC FROM A TITLE 2 XYLELLA FASTIDIOSA TEMECULA1 HEMOLYSIN IN COMPLEX WITH MG++ AND MN++ COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOLYSIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CORC_HLYC DOMAIN: RESIDUES 349-439; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XYLELLA FASTIDIOSA; SOURCE 3 ORGANISM_TAXID: 183190; SOURCE 4 STRAIN: TEMECULA1; SOURCE 5 ATCC: 700964; SOURCE 6 GENE: TLYC; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS CORC, HEMOLYSIN, STRUCTURAL GENOMICS, PFAM03471, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR M.E.CUFF,L.VOLKART,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 25-OCT-17 2R8D 1 REMARK REVDAT 3 13-JUL-11 2R8D 1 VERSN REVDAT 2 24-FEB-09 2R8D 1 VERSN REVDAT 1 13-NOV-07 2R8D 0 JRNL AUTH M.E.CUFF,L.VOLKART,A.JOACHIMIAK JRNL TITL THE STRUCTURE OF TRANSPORTER ASSOCIATED DOMAIN CORC IN JRNL TITL 2 COMPLEX WITH MG++ AND MN++ FROM XYLELLA FASTIDIOSA. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 7129 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 337 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 179 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 33.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 9 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 636 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 36.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.054 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 655 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 887 ; 1.309 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 79 ; 5.875 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 34 ;42.734 ;23.529 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 107 ;14.963 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;20.481 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 98 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 499 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 309 ; 0.185 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 446 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 40 ; 0.132 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.005 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.205 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.152 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 404 ; 1.201 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 623 ; 1.423 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 291 ; 2.259 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 263 ; 3.391 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 91 REMARK 3 ORIGIN FOR THE GROUP (A): 23.6435 41.4612 10.5886 REMARK 3 T TENSOR REMARK 3 T11: -0.3476 T22: -0.2472 REMARK 3 T33: -0.3122 T12: 0.0340 REMARK 3 T13: -0.0018 T23: 0.0519 REMARK 3 L TENSOR REMARK 3 L11: 3.2223 L22: 5.4709 REMARK 3 L33: 3.7470 L12: -1.1919 REMARK 3 L13: -1.4603 L23: 0.0242 REMARK 3 S TENSOR REMARK 3 S11: 0.0269 S12: -0.5916 S13: 0.0936 REMARK 3 S21: 0.6604 S22: 0.3394 S23: -0.0143 REMARK 3 S31: 0.0107 S32: -0.0750 S33: -0.3662 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2R8D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044552. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97925 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7134 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 30.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : 0.35600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: MLPHARE, DM 5.0, HKL-3000, SHELXD, SOLVE, RESOLVE, REMARK 200 CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH 8.5, 0.2M MGCL2, 20% REMARK 280 PEG 8000, 5MM MNCL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.03050 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 44.03050 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 44.03050 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 44.03050 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 44.03050 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 44.03050 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 44.03050 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 44.03050 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 44.03050 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 44.03050 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 44.03050 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 44.03050 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 44.03050 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 44.03050 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 44.03050 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 44.03050 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 44.03050 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 44.03050 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 44.03050 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 44.03050 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 44.03050 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 44.03050 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 44.03050 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 44.03050 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 44.03050 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 44.03050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS POLYPEPTIDE REMARK 300 IS UNKNOWN, LIKELY DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1640 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 88.06100 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MN MN A 92 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 GLU A 1 REMARK 465 ASN A 2 REMARK 465 THR A 3 REMARK 465 ASP A 4 REMARK 465 GLU A 5 REMARK 465 ASP A 6 REMARK 465 LEU A 36 REMARK 465 PRO A 37 REMARK 465 ASP A 38 REMARK 465 GLY A 39 REMARK 465 GLU A 40 REMARK 465 GLU A 41 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 45 -6.76 -141.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 92 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 76 OD2 REMARK 620 2 ASP A 78 OD2 87.6 REMARK 620 3 ASP A 83 OD2 88.7 87.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 93 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 83 OD2 REMARK 620 2 HOH A 104 O 84.2 REMARK 620 3 HOH A 96 O 85.1 86.2 REMARK 620 4 HOH A 133 O 171.4 87.2 93.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 92 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 93 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC86234.2 RELATED DB: TARGETDB REMARK 900 RELATED ID: 2OAI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRANSPORTER ASSOCIATED DOMAIN CORC_HLYC FROM A REMARK 900 XYLELLA FASTIDIOSA TEMECULA1 HEMOLYSIN (SAME PROTEIN COMPLEXED WITH REMARK 900 CA++) DBREF 2R8D A 1 91 UNP Q87DZ3 Q87DZ3_XYLFT 349 439 SEQADV 2R8D SER A -2 UNP Q87DZ3 EXPRESSION TAG SEQADV 2R8D ASN A -1 UNP Q87DZ3 EXPRESSION TAG SEQADV 2R8D ALA A 0 UNP Q87DZ3 EXPRESSION TAG SEQRES 1 A 94 SER ASN ALA GLU ASN THR ASP GLU ASP ALA LEU MSE VAL SEQRES 2 A 94 THR ARG GLU ASP GLY SER PHE LEU ILE ASP GLY THR LEU SEQRES 3 A 94 PRO ILE GLU GLU LEU ARG GLU VAL LEU GLY ALA GLU LEU SEQRES 4 A 94 PRO ASP GLY GLU GLU ASN ASN TYR HIS THR LEU ALA GLY SEQRES 5 A 94 MSE CYS ILE SER TYR PHE GLY ARG ILE PRO HIS VAL GLY SEQRES 6 A 94 GLU TYR PHE ASP TRP ALA GLY TRP ARG ILE GLU ILE VAL SEQRES 7 A 94 ASP LEU ASP GLY ALA ARG ILE ASP MLY LEU LEU LEU GLN SEQRES 8 A 94 ARG LEU ASN MODRES 2R8D MSE A 9 MET SELENOMETHIONINE MODRES 2R8D MSE A 50 MET SELENOMETHIONINE MODRES 2R8D MLY A 84 LYS N-DIMETHYL-LYSINE HET MSE A 9 8 HET MSE A 50 8 HET MLY A 84 11 HET MN A 92 1 HET MG A 93 1 HETNAM MSE SELENOMETHIONINE HETNAM MLY N-DIMETHYL-LYSINE HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 1 MLY C8 H18 N2 O2 FORMUL 2 MN MN 2+ FORMUL 3 MG MG 2+ FORMUL 4 HOH *68(H2 O) HELIX 1 1 PRO A 24 GLY A 33 1 10 HELIX 2 2 THR A 46 GLY A 56 1 11 SHEET 1 A 5 MSE A 9 THR A 11 0 SHEET 2 A 5 PHE A 17 ASP A 20 -1 O LEU A 18 N VAL A 10 SHEET 3 A 5 ARG A 81 ARG A 89 -1 O LEU A 87 N PHE A 17 SHEET 4 A 5 TRP A 70 ASP A 78 -1 N ARG A 71 O GLN A 88 SHEET 5 A 5 TYR A 64 TRP A 67 -1 N TRP A 67 O TRP A 70 LINK OD2 ASP A 76 MN MN A 92 1555 1555 2.06 LINK OD2 ASP A 78 MN MN A 92 1555 1555 2.18 LINK OD2 ASP A 83 MG MG A 93 1555 1555 2.13 LINK OD2 ASP A 83 MN MN A 92 1555 1555 2.42 LINK MG MG A 93 O HOH A 104 1555 1555 2.26 LINK MG MG A 93 O HOH A 96 1555 1555 2.18 LINK MG MG A 93 O HOH A 133 1555 1555 1.99 LINK C LEU A 8 N MSE A 9 1555 1555 1.32 LINK C MSE A 9 N VAL A 10 1555 1555 1.33 LINK C GLY A 49 N MSE A 50 1555 1555 1.33 LINK C MSE A 50 N CYS A 51 1555 1555 1.33 LINK C ASP A 83 N MLY A 84 1555 1555 1.33 LINK C MLY A 84 N LEU A 85 1555 1555 1.33 SITE 1 AC1 3 ASP A 76 ASP A 78 ASP A 83 SITE 1 AC2 6 ASP A 76 ASP A 78 ASP A 83 HOH A 96 SITE 2 AC2 6 HOH A 104 HOH A 133 CRYST1 88.061 88.061 88.061 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011356 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011356 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011356 0.00000