HEADER UNKNOWN FUNCTION 14-SEP-07 2RA9 TITLE CRYSTAL STRUCTURE OF A DUF1285 FAMILY PROTEIN (SBAL_2486) FROM TITLE 2 SHEWANELLA BALTICA OS155 AT 1.40 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN DUF1285; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 9-157; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA BALTICA; SOURCE 3 ORGANISM_TAXID: 325240; SOURCE 4 STRAIN: OS155; SOURCE 5 GENE: YP_001050848.1, SBAL_2486; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 8 25-JAN-23 2RA9 1 REMARK SEQADV LINK REVDAT 7 24-JUL-19 2RA9 1 REMARK LINK REVDAT 6 25-OCT-17 2RA9 1 REMARK REVDAT 5 24-OCT-12 2RA9 1 JRNL REVDAT 4 13-JUL-11 2RA9 1 VERSN REVDAT 3 23-MAR-11 2RA9 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2RA9 1 VERSN REVDAT 1 16-OCT-07 2RA9 0 JRNL AUTH G.W.HAN,C.BAKOLITSA,M.D.MILLER,A.KUMAR,D.CARLTON, JRNL AUTH 2 R.J.NAJMANOVICH,P.ABDUBEK,T.ASTAKHOVA,H.L.AXELROD,C.CHEN, JRNL AUTH 3 H.J.CHIU,T.CLAYTON,D.DAS,M.C.DELLER,L.DUAN,D.ERNST, JRNL AUTH 4 J.FEUERHELM,J.C.GRANT,A.GRZECHNIK,L.JAROSZEWSKI,K.K.JIN, JRNL AUTH 5 H.A.JOHNSON,H.E.KLOCK,M.W.KNUTH,P.KOZBIAL,S.S.KRISHNA, JRNL AUTH 6 D.MARCIANO,D.MCMULLAN,A.T.MORSE,E.NIGOGHOSSIAN,L.OKACH, JRNL AUTH 7 R.REYES,C.L.RIFE,N.SEFCOVIC,H.J.TIEN,C.B.TRAME, JRNL AUTH 8 H.VAN DEN BEDEM,D.WEEKES,Q.XU,K.O.HODGSON,J.WOOLEY, JRNL AUTH 9 M.A.ELSLIGER,A.M.DEACON,A.GODZIK,S.A.LESLEY,I.A.WILSON JRNL TITL STRUCTURES OF THE FIRST REPRESENTATIVES OF PFAM FAMILY JRNL TITL 2 PF06938 (DUF1285) REVEAL A NEW FOLD WITH REPEATED STRUCTURAL JRNL TITL 3 MOTIFS AND POSSIBLE INVOLVEMENT IN SIGNAL TRANSDUCTION. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 66 1218 2010 JRNL REFN ESSN 1744-3091 JRNL PMID 20944214 JRNL DOI 10.1107/S1744309109050416 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 35168 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1764 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2401 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.2100 REMARK 3 BIN FREE R VALUE SET COUNT : 139 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1018 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 231 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.20000 REMARK 3 B22 (A**2) : -0.10000 REMARK 3 B33 (A**2) : 0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.056 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.055 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.032 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.765 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1081 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 731 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1463 ; 1.519 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1788 ; 0.936 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 132 ; 7.175 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;27.717 ;24.800 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 177 ;13.126 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;10.076 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 167 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1174 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 212 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 225 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 758 ; 0.210 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 514 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 552 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 154 ; 0.179 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.115 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.113 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 19 ; 0.158 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.112 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 643 ; 2.479 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 256 ; 1.528 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1047 ; 3.445 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 450 ; 4.634 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 413 ; 6.298 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1897 ; 2.629 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 232 ; 5.761 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1791 ; 3.852 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 3. EDO MOLECULES FROM THE CRYO SOLUTION ARE MODELED. REMARK 3 4. RESIDUES AT THE N-TERMINUS (0, 9-28) ARE DISORDERED AND WERE REMARK 3 NOT MODELED. REMARK 4 REMARK 4 2RA9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795, 0.9798, 1.0000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35222 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 29.854 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -4.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : 0.05800 REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.61300 REMARK 200 R SYM FOR SHELL (I) : 0.61300 REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP, SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 20.0% ISOPROPANOL, 20.0% PEG REMARK 280 4000, 0.1M CITRATE PH 5.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.20450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.62350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.14300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.62350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.20450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.14300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLN A 9 REMARK 465 HIS A 10 REMARK 465 THR A 11 REMARK 465 LEU A 12 REMARK 465 LYS A 13 REMARK 465 GLN A 14 REMARK 465 PHE A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 ASP A 18 REMARK 465 SER A 19 REMARK 465 ALA A 20 REMARK 465 LEU A 21 REMARK 465 THR A 22 REMARK 465 THR A 23 REMARK 465 THR A 24 REMARK 465 THR A 25 REMARK 465 PRO A 26 REMARK 465 LEU A 27 REMARK 465 CYS A 28 REMARK 465 GLU A 156 REMARK 465 GLN A 157 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 244 O HOH A 252 2.11 REMARK 500 CD2 LEU A 39 OD2 ASP A 41 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 83 -96.18 -135.72 REMARK 500 THR A 121 -165.34 -110.20 REMARK 500 LEU A 129 -162.85 -118.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 29 GLU A 30 147.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 158 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 147 O REMARK 620 2 PHE A 149 O 109.9 REMARK 620 3 HOH A 167 O 85.6 102.0 REMARK 620 4 HOH A 264 O 81.7 165.5 87.2 REMARK 620 5 HOH A 266 O 76.2 91.4 160.2 82.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 158 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 159 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 160 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 163 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 165 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 380281 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 9-157 REMARK 999 OF THE TARGET SEQUENCE. DBREF 2RA9 A 9 157 UNP A3D5G6 A3D5G6_9GAMM 9 157 SEQADV 2RA9 GLY A 0 UNP A3D5G6 EXPRESSION TAG SEQRES 1 A 150 GLY GLN HIS THR LEU LYS GLN PHE ALA ALA ASP SER ALA SEQRES 2 A 150 LEU THR THR THR THR PRO LEU CYS SER GLU VAL PRO LEU SEQRES 3 A 150 PHE ASP ILE ASN ALA LEU GLY ASP TRP THR TYR LEU GLY SEQRES 4 A 150 THR SER LEU PRO ALA LYS PHE ALA LYS LEU PHE ALA SER SEQRES 5 A 150 ILE LEU HIS CYS ILE ASP ASP GLU TYR PHE LEU ILE THR SEQRES 6 A 150 PRO VAL GLU LYS VAL ARG VAL GLN VAL GLU ASP ALA PRO SEQRES 7 A 150 LEU LEU ILE VAL ASP PHE GLU ARG ALA GLN PRO HIS SER SEQRES 8 A 150 LEU LEU ASN VAL SER THR SER ILE GLY THR LEU HIS HIS SEQRES 9 A 150 ASN VAL ASP ILE LYS GLN MSE LYS LEU THR ASP ASP SER SEQRES 10 A 150 VAL TYR LEU PRO LEU GLU ARG GLY LEU TRP GLY LYS LEU SEQRES 11 A 150 GLY ARG ALA CYS TYR TYR ASN PHE VAL ASN GLU PHE ASN SEQRES 12 A 150 LEU SER ASP LEU ASN GLU GLN MODRES 2RA9 MSE A 118 MET SELENOMETHIONINE HET MSE A 118 8 HET NA A 158 1 HET EDO A 159 4 HET EDO A 160 4 HET EDO A 161 4 HET EDO A 162 4 HET EDO A 163 4 HET EDO A 164 4 HET EDO A 165 4 HETNAM MSE SELENOMETHIONINE HETNAM NA SODIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE C5 H11 N O2 SE FORMUL 2 NA NA 1+ FORMUL 3 EDO 7(C2 H6 O2) FORMUL 10 HOH *231(H2 O) HELIX 1 1 PRO A 50 SER A 59 1 10 HELIX 2 2 ASP A 114 MSE A 118 5 5 HELIX 3 3 CYS A 141 PHE A 149 1 9 HELIX 4 4 ASN A 150 ASN A 155 5 6 SHEET 1 A 6 THR A 47 SER A 48 0 SHEET 2 A 6 TRP A 42 TYR A 44 -1 N TYR A 44 O THR A 47 SHEET 3 A 6 PHE A 34 ILE A 36 -1 N ASP A 35 O THR A 43 SHEET 4 A 6 LYS A 76 VAL A 81 1 O GLN A 80 N PHE A 34 SHEET 5 A 6 GLU A 67 ILE A 71 -1 N LEU A 70 O VAL A 77 SHEET 6 A 6 LEU A 61 ILE A 64 -1 N ILE A 64 O GLU A 67 SHEET 1 B 6 LEU A 109 VAL A 113 0 SHEET 2 B 6 LEU A 100 THR A 104 -1 N LEU A 100 O VAL A 113 SHEET 3 B 6 LEU A 86 ARG A 93 -1 N GLU A 92 O ASN A 101 SHEET 4 B 6 TRP A 134 LEU A 137 1 O LYS A 136 N LEU A 86 SHEET 5 B 6 VAL A 125 PRO A 128 -1 N VAL A 125 O LEU A 137 SHEET 6 B 6 LYS A 119 LEU A 120 -1 N LYS A 119 O TYR A 126 LINK C GLN A 117 N MSE A 118 1555 1555 1.32 LINK C MSE A 118 N LYS A 119 1555 1555 1.33 LINK O ASN A 147 NA NA A 158 1555 1555 2.53 LINK O PHE A 149 NA NA A 158 1555 1555 2.25 LINK NA NA A 158 O HOH A 167 1555 1555 2.41 LINK NA NA A 158 O HOH A 264 1555 1555 2.41 LINK NA NA A 158 O HOH A 266 1555 1555 2.37 SITE 1 AC1 6 ASN A 147 PHE A 149 HOH A 167 HOH A 195 SITE 2 AC1 6 HOH A 264 HOH A 266 SITE 1 AC2 7 ASP A 35 PRO A 73 VAL A 74 GLU A 75 SITE 2 AC2 7 LYS A 76 HOH A 196 HOH A 344 SITE 1 AC3 3 ASP A 90 CYS A 141 ASN A 144 SITE 1 AC4 4 GLY A 138 ARG A 139 HOH A 175 HOH A 209 SITE 1 AC5 7 ASP A 123 SER A 124 VAL A 125 LEU A 137 SITE 2 AC5 7 ARG A 139 TYR A 142 HOH A 307 SITE 1 AC6 3 SER A 103 GLY A 107 ASP A 122 SITE 1 AC7 4 GLU A 75 ASN A 147 HOH A 167 HOH A 229 SITE 1 AC8 6 SER A 29 ARG A 139 TYR A 142 TYR A 143 SITE 2 AC8 6 HOH A 378 HOH A 386 CRYST1 38.409 62.286 73.247 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026036 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016055 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013652 0.00000