HEADER HYDROLASE 17-SEP-07 2RAU TITLE CRYSTAL STRUCTURE OF A PUTATIVE LIPASE (NP_343859.1) FROM SULFOLOBUS TITLE 2 SOLFATARICUS AT 1.85 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ESTERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS P2; SOURCE 3 ORGANISM_TAXID: 273057; SOURCE 4 STRAIN: P2, DSM 1617, JCM 11322; SOURCE 5 ATCC: 35092; SOURCE 6 GENE: NP_343859.1, SSO2518; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NP_343859.1, PUTATIVE LIPASE, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, KEYWDS 3 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 25-JAN-23 2RAU 1 REMARK SEQADV LINK REVDAT 5 24-JUL-19 2RAU 1 REMARK LINK REVDAT 4 25-OCT-17 2RAU 1 REMARK REVDAT 3 13-JUL-11 2RAU 1 VERSN REVDAT 2 24-FEB-09 2RAU 1 VERSN REVDAT 1 09-OCT-07 2RAU 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE LIPASE (NP_343859.1) FROM JRNL TITL 2 SULFOLOBUS SOLFATARICUS AT 1.85 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 48690 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2458 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3380 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 176 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2773 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 333 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.94000 REMARK 3 B22 (A**2) : 0.94000 REMARK 3 B33 (A**2) : -1.41000 REMARK 3 B12 (A**2) : 0.47000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.093 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.094 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.584 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2991 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2049 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4067 ; 1.686 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4995 ; 1.019 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 366 ; 5.621 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 127 ;36.898 ;23.937 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 459 ;12.128 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;22.289 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 431 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3314 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 616 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 573 ; 0.215 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2133 ; 0.193 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1457 ; 0.187 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 1473 ; 0.091 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 432 ; 0.205 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.104 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.291 ; 0.500 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 9 ; 0.200 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 27 ; 0.208 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 32 ; 0.248 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 1 ; 0.066 ; 0.500 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1872 ; 2.059 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 721 ; 0.526 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2921 ; 2.974 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1359 ; 4.449 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1146 ; 6.341 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 353 REMARK 3 ORIGIN FOR THE GROUP (A): 44.7960 32.7220 14.4800 REMARK 3 T TENSOR REMARK 3 T11: -0.0599 T22: -0.0226 REMARK 3 T33: -0.1573 T12: -0.0186 REMARK 3 T13: 0.0070 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 0.5262 L22: 0.4994 REMARK 3 L33: 1.6878 L12: 0.0195 REMARK 3 L13: 0.0106 L23: 0.3130 REMARK 3 S TENSOR REMARK 3 S11: -0.0165 S12: 0.0573 S13: -0.0276 REMARK 3 S21: 0.0063 S22: -0.0706 S23: 0.1382 REMARK 3 S31: 0.1543 S32: -0.2635 S33: 0.0871 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. REMARK 3 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL REMARK 3 S-MET INCORPORATION. REMARK 3 4. CALCIUM IONS, UNKNOWN LIGAND, POLYETHYLENE GLYCOL AND REMARK 3 ETHYLENE GLYCOL MOLECULES ARE MODELED IN THE STRUCTURE. REMARK 3 5. RESIDUES 0, 1, 186 AND 187 ARE DISORDERED AND NOT MODELED REMARK 3 IN THE STRUCTURE. REMARK 4 REMARK 4 2RAU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044636. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97937, 0.97916 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 (HORIZONTAL FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48739 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 28.548 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.89600 REMARK 200 R SYM FOR SHELL (I) : 0.89600 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 0.2M CACL2, 28.0% PEG 400, REMARK 280 0.1M HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.67733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 93.35467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 93.35467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.67733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT REMARK 300 OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2010 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 124.99950 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 72.16849 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 46.67733 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 374 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 443 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 PRO A 186 REMARK 465 LYS A 187 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 2 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 3 CD OE1 OE2 REMARK 470 GLU A 4 CD OE1 OE2 REMARK 470 LYS A 110 CD CE NZ REMARK 470 HIS A 182 CG ND1 CD2 CE1 NE2 REMARK 470 ILE A 184 CG1 CG2 CD1 REMARK 470 ARG A 185 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 197 CG CD OE1 OE2 REMARK 470 LYS A 233 CE NZ REMARK 470 ASP A 284 CG OD1 OD2 REMARK 470 LYS A 286 CG CD CE NZ REMARK 470 GLU A 290 CG CD OE1 OE2 REMARK 470 GLN A 307 OE1 NE2 REMARK 470 SER A 311 OG REMARK 470 LYS A 312 CG CD CE NZ REMARK 470 ILE A 313 CG1 CG2 CD1 REMARK 470 SER A 316 OG REMARK 470 LYS A 324 CD CE NZ REMARK 470 LYS A 347 CE NZ REMARK 470 ARG A 353 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 3 -39.24 -37.63 REMARK 500 ARG A 29 -168.15 -117.91 REMARK 500 ASP A 50 -156.20 65.42 REMARK 500 ASP A 111 -122.62 53.47 REMARK 500 SER A 151 -123.35 60.48 REMARK 500 TYR A 258 61.51 63.27 REMARK 500 GLU A 282 33.31 -95.17 REMARK 500 PHE A 304 -58.69 -147.07 REMARK 500 VAL A 341 -61.36 -120.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 355 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 141 O REMARK 620 2 GLU A 143 OE1 102.9 REMARK 620 3 GLU A 143 OE2 98.2 51.8 REMARK 620 4 ASP A 239 OD1 86.7 156.3 149.1 REMARK 620 5 EDO A 357 O2 73.5 93.9 142.9 67.8 REMARK 620 6 HOH A 445 O 157.6 78.8 100.1 84.2 84.1 REMARK 620 7 HOH A 486 O 82.9 125.2 73.4 77.0 138.2 114.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 354 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 217 N REMARK 620 2 HOH A 393 O 121.3 REMARK 620 3 HOH A 430 O 142.4 81.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 356 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 226 N REMARK 620 2 HOH A 429 O 158.7 REMARK 620 3 HOH A 587 O 109.9 83.2 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 354 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 355 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 356 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 357 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 358 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL A 359 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 360 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 361 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 362 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 363 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 375699 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 2RAU A 1 353 UNP Q97VU1 Q97VU1_SULSO 1 353 SEQADV 2RAU GLY A 0 UNP Q97VU1 EXPRESSION TAG SEQRES 1 A 354 GLY MSE TYR GLU GLU TRP LYS ILE VAL LYS ARG GLU ALA SEQRES 2 A 354 PRO ILE LEU GLY ASN ASP GLN LEU ILE GLU ASN ILE TRP SEQRES 3 A 354 LYS MSE LYS ARG GLU ASP SER PRO TYR ASP ILE ILE SER SEQRES 4 A 354 LEU HIS LYS VAL ASN LEU ILE GLY GLY GLY ASN ASP ALA SEQRES 5 A 354 VAL LEU ILE LEU PRO GLY THR TRP SER SER GLY GLU GLN SEQRES 6 A 354 LEU VAL THR ILE SER TRP ASN GLY VAL HIS TYR THR ILE SEQRES 7 A 354 PRO ASP TYR ARG LYS SER ILE VAL LEU TYR LEU ALA ARG SEQRES 8 A 354 ASN GLY PHE ASN VAL TYR THR ILE ASP TYR ARG THR HIS SEQRES 9 A 354 TYR VAL PRO PRO PHE LEU LYS ASP ARG GLN LEU SER PHE SEQRES 10 A 354 THR ALA ASN TRP GLY TRP SER THR TRP ILE SER ASP ILE SEQRES 11 A 354 LYS GLU VAL VAL SER PHE ILE LYS ARG ASP SER GLY GLN SEQRES 12 A 354 GLU ARG ILE TYR LEU ALA GLY GLU SER PHE GLY GLY ILE SEQRES 13 A 354 ALA ALA LEU ASN TYR SER SER LEU TYR TRP LYS ASN ASP SEQRES 14 A 354 ILE LYS GLY LEU ILE LEU LEU ASP GLY GLY PRO THR LYS SEQRES 15 A 354 HIS GLY ILE ARG PRO LYS PHE TYR THR PRO GLU VAL ASN SEQRES 16 A 354 SER ILE GLU GLU MSE GLU ALA LYS GLY ILE TYR VAL ILE SEQRES 17 A 354 PRO SER ARG GLY GLY PRO ASN ASN PRO ILE TRP SER TYR SEQRES 18 A 354 ALA LEU ALA ASN PRO ASP MSE PRO SER PRO ASP PRO LYS SEQRES 19 A 354 TYR LYS SER ILE SER ASP PHE LEU MSE ASP SER LEU TYR SEQRES 20 A 354 VAL THR GLY SER ALA ASN PRO TYR ASP TYR PRO TYR SER SEQRES 21 A 354 LYS LYS GLU ASP MSE PHE PRO ILE LEU ALA SER PHE ASP SEQRES 22 A 354 PRO TYR TRP PRO TYR ARG LEU SER LEU GLU ARG ASP LEU SEQRES 23 A 354 LYS PHE ASP TYR GLU GLY ILE LEU VAL PRO THR ILE ALA SEQRES 24 A 354 PHE VAL SER GLU ARG PHE GLY ILE GLN ILE PHE ASP SER SEQRES 25 A 354 LYS ILE LEU PRO SER ASN SER GLU ILE ILE LEU LEU LYS SEQRES 26 A 354 GLY TYR GLY HIS LEU ASP VAL TYR THR GLY GLU ASN SER SEQRES 27 A 354 GLU LYS ASP VAL ASN SER VAL VAL LEU LYS TRP LEU SER SEQRES 28 A 354 GLN GLN ARG MODRES 2RAU MSE A 27 MET SELENOMETHIONINE MODRES 2RAU MSE A 199 MET SELENOMETHIONINE MODRES 2RAU MSE A 227 MET SELENOMETHIONINE MODRES 2RAU MSE A 242 MET SELENOMETHIONINE MODRES 2RAU MSE A 264 MET SELENOMETHIONINE HET MSE A 27 8 HET MSE A 199 8 HET MSE A 227 8 HET MSE A 242 8 HET MSE A 264 8 HET CA A 354 1 HET CA A 355 1 HET CA A 356 1 HET EDO A 357 4 HET PG4 A 358 13 HET UNL A 359 20 HET PEG A 360 7 HET PEG A 361 7 HET PEG A 362 7 HET PEG A 363 7 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM UNL UNKNOWN LIGAND HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 CA 3(CA 2+) FORMUL 5 EDO C2 H6 O2 FORMUL 6 PG4 C8 H18 O5 FORMUL 8 PEG 4(C4 H10 O3) FORMUL 12 HOH *333(H2 O) HELIX 1 1 SER A 61 ILE A 68 1 8 HELIX 2 2 ASP A 79 LYS A 82 5 4 HELIX 3 3 SER A 83 ASN A 91 1 9 HELIX 4 4 TYR A 100 VAL A 105 5 6 HELIX 5 5 LYS A 110 ALA A 118 5 9 HELIX 6 6 GLY A 121 GLY A 141 1 21 HELIX 7 7 SER A 151 ASP A 168 1 18 HELIX 8 8 SER A 195 GLY A 203 1 9 HELIX 9 9 PRO A 216 ASN A 224 1 9 HELIX 10 10 SER A 236 THR A 248 1 13 HELIX 11 11 LYS A 260 SER A 270 1 11 HELIX 12 12 TYR A 277 GLU A 282 1 6 HELIX 13 13 PHE A 304 PHE A 309 1 6 HELIX 14 14 ASP A 310 LEU A 314 5 5 HELIX 15 15 GLY A 327 TYR A 332 5 6 HELIX 16 16 ASN A 336 VAL A 341 1 6 HELIX 17 17 VAL A 341 ARG A 353 1 13 SHEET 1 A 9 LYS A 6 ILE A 14 0 SHEET 2 A 9 ASN A 17 LYS A 28 -1 O ILE A 24 N VAL A 8 SHEET 3 A 9 ILE A 36 LEU A 44 -1 O ASN A 43 N ILE A 21 SHEET 4 A 9 PHE A 93 ASP A 99 -1 O VAL A 95 N VAL A 42 SHEET 5 A 9 ASN A 49 LEU A 55 1 N VAL A 52 O TYR A 96 SHEET 6 A 9 ILE A 145 GLU A 150 1 O ALA A 148 N LEU A 53 SHEET 7 A 9 ILE A 169 LEU A 175 1 O LEU A 175 N GLY A 149 SHEET 8 A 9 THR A 296 SER A 301 1 O PHE A 299 N LEU A 174 SHEET 9 A 9 GLU A 319 LEU A 323 1 O ILE A 321 N ALA A 298 SHEET 1 B 2 SER A 69 TRP A 70 0 SHEET 2 B 2 VAL A 73 HIS A 74 -1 O VAL A 73 N TRP A 70 SHEET 1 C 2 VAL A 206 PRO A 208 0 SHEET 2 C 2 TYR A 274 PRO A 276 -1 O TRP A 275 N ILE A 207 LINK C LYS A 26 N MSE A 27 1555 1555 1.34 LINK C MSE A 27 N LYS A 28 1555 1555 1.33 LINK C GLU A 198 N MSE A 199 1555 1555 1.33 LINK C MSE A 199 N GLU A 200 1555 1555 1.32 LINK C ASP A 226 N MSE A 227 1555 1555 1.32 LINK C MSE A 227 N PRO A 228 1555 1555 1.32 LINK C LEU A 241 N MSE A 242 1555 1555 1.33 LINK C MSE A 242 N ASP A 243 1555 1555 1.33 LINK C ASP A 263 N MSE A 264 1555 1555 1.32 LINK C MSE A 264 N PHE A 265 1555 1555 1.32 LINK O GLY A 141 CA CA A 355 1555 1555 2.38 LINK OE1 GLU A 143 CA CA A 355 1555 1555 2.66 LINK OE2 GLU A 143 CA CA A 355 1555 1555 2.19 LINK N ILE A 217 CA CA A 354 1555 1555 3.28 LINK N ASP A 226 CA CA A 356 1555 1555 3.25 LINK OD1 ASP A 239 CA CA A 355 3664 1555 2.36 LINK CA CA A 354 O HOH A 393 1555 6765 3.04 LINK CA CA A 354 O HOH A 430 1555 1555 3.08 LINK CA CA A 355 O2 EDO A 357 1555 1555 1.97 LINK CA CA A 355 O HOH A 445 1555 1555 2.51 LINK CA CA A 355 O HOH A 486 1555 1555 2.66 LINK CA CA A 356 O HOH A 429 1555 6765 2.93 LINK CA CA A 356 O HOH A 587 1555 6765 2.96 CISPEP 1 GLU A 30 ASP A 31 0 2.08 CISPEP 2 TYR A 256 PRO A 257 0 6.71 SITE 1 AC1 5 PRO A 216 ILE A 217 PG4 A 358 HOH A 393 SITE 2 AC1 5 HOH A 430 SITE 1 AC2 6 GLY A 141 GLU A 143 ASP A 239 EDO A 357 SITE 2 AC2 6 HOH A 445 HOH A 486 SITE 1 AC3 5 ASN A 224 PRO A 225 ASP A 226 HOH A 429 SITE 2 AC3 5 HOH A 587 SITE 1 AC4 9 GLY A 141 GLN A 142 GLU A 143 ASP A 239 SITE 2 AC4 9 CA A 355 HOH A 408 HOH A 445 HOH A 447 SITE 3 AC4 9 HOH A 460 SITE 1 AC5 8 ARG A 210 ASN A 215 ILE A 217 PRO A 230 SITE 2 AC5 8 PHE A 240 SER A 244 CA A 354 HOH A 440 SITE 1 AC6 11 THR A 58 GLN A 64 ILE A 68 LYS A 82 SITE 2 AC6 11 PHE A 188 LEU A 245 ILE A 267 PHE A 271 SITE 3 AC6 11 TYR A 332 HOH A 394 HOH A 505 SITE 1 AC7 4 SER A 151 PHE A 188 TYR A 189 PHE A 309 SITE 1 AC8 4 ARG A 138 ASP A 139 LYS A 233 HOH A 671 SITE 1 AC9 4 SER A 123 LYS A 286 PHE A 287 HOH A 441 SITE 1 BC1 4 ASN A 49 ASP A 50 ASN A 91 GLY A 92 CRYST1 83.333 83.333 140.032 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012000 0.006928 0.000000 0.00000 SCALE2 0.000000 0.013856 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007141 0.00000