data_2RBA # _entry.id 2RBA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RBA pdb_00002rba 10.2210/pdb2rba/pdb NDB PD1056 ? ? RCSB RCSB044652 ? ? WWPDB D_1000044652 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2RBA _pdbx_database_status.recvd_initial_deposition_date 2007-09-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Maiti, A.' 1 'Pozharski, E.' 2 'Drohat, A.C.' 3 # _citation.id primary _citation.title 'Crystal structure of human thymine DNA glycosylase bound to DNA elucidates sequence-specific mismatch recognition.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 105 _citation.page_first 8890 _citation.page_last 8895 _citation.year 2008 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18587051 _citation.pdbx_database_id_DOI 10.1073/pnas.0711061105 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Maiti, A.' 1 ? primary 'Morgan, M.T.' 2 ? primary 'Pozharski, E.' 3 ? primary 'Drohat, A.C.' 4 ? # _cell.entry_id 2RBA _cell.length_a 162.133 _cell.length_b 162.133 _cell.length_c 56.142 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2RBA _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DCP*DAP*DGP*DCP*DTP*DCP*DTP*DGP*DTP*DAP*DCP*DGP*DTP*DGP*DAP*DGP*DCP*DAP*DGP*DTP*DGP*DGP*DA)-3') ; 7121.597 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*DCP*DCP*DAP*DCP*DTP*DGP*DCP*DTP*DCP*DAP*(3DR)P*DGP*DTP*DAP*DCP*DAP*DGP*DAP*DGP*DCP*DTP*DGP*DT)-3') ; 6892.438 1 ? ? ? ? 3 polymer man 'G/T mismatch-specific thymine DNA glycosylase' 23070.670 2 3.2.2.- ? 'Core domain' ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DC)(DA)(DG)(DC)(DT)(DC)(DT)(DG)(DT)(DA)(DC)(DG)(DT)(DG)(DA)(DG)(DC)(DA)(DG)(DT) (DG)(DG)(DA) ; CAGCTCTGTACGTGAGCAGTGGA C ? 2 polydeoxyribonucleotide no yes ;(DC)(DC)(DA)(DC)(DT)(DG)(DC)(DT)(DC)(DA)(3DR)(DG)(DT)(DA)(DC)(DA)(DG)(DA)(DG) (DC)(DT)(DG)(DT) ; CCACTGCTCANGTACAGAGCTGT D ? 3 'polypeptide(L)' no no ;GSHMASFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGK YGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTET LCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV ; ;GSHMASFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGK YGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTET LCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DA n 1 3 DG n 1 4 DC n 1 5 DT n 1 6 DC n 1 7 DT n 1 8 DG n 1 9 DT n 1 10 DA n 1 11 DC n 1 12 DG n 1 13 DT n 1 14 DG n 1 15 DA n 1 16 DG n 1 17 DC n 1 18 DA n 1 19 DG n 1 20 DT n 1 21 DG n 1 22 DG n 1 23 DA n 2 1 DC n 2 2 DC n 2 3 DA n 2 4 DC n 2 5 DT n 2 6 DG n 2 7 DC n 2 8 DT n 2 9 DC n 2 10 DA n 2 11 3DR n 2 12 DG n 2 13 DT n 2 14 DA n 2 15 DC n 2 16 DA n 2 17 DG n 2 18 DA n 2 19 DG n 2 20 DC n 2 21 DT n 2 22 DG n 2 23 DT n 3 1 GLY n 3 2 SER n 3 3 HIS n 3 4 MET n 3 5 ALA n 3 6 SER n 3 7 PHE n 3 8 ASN n 3 9 GLY n 3 10 VAL n 3 11 SER n 3 12 GLU n 3 13 ALA n 3 14 GLU n 3 15 LEU n 3 16 LEU n 3 17 THR n 3 18 LYS n 3 19 THR n 3 20 LEU n 3 21 PRO n 3 22 ASP n 3 23 ILE n 3 24 LEU n 3 25 THR n 3 26 PHE n 3 27 ASN n 3 28 LEU n 3 29 ASP n 3 30 ILE n 3 31 VAL n 3 32 ILE n 3 33 ILE n 3 34 GLY n 3 35 ILE n 3 36 ASN n 3 37 PRO n 3 38 GLY n 3 39 LEU n 3 40 MET n 3 41 ALA n 3 42 ALA n 3 43 TYR n 3 44 LYS n 3 45 GLY n 3 46 HIS n 3 47 HIS n 3 48 TYR n 3 49 PRO n 3 50 GLY n 3 51 PRO n 3 52 GLY n 3 53 ASN n 3 54 HIS n 3 55 PHE n 3 56 TRP n 3 57 LYS n 3 58 CYS n 3 59 LEU n 3 60 PHE n 3 61 MET n 3 62 SER n 3 63 GLY n 3 64 LEU n 3 65 SER n 3 66 GLU n 3 67 VAL n 3 68 GLN n 3 69 LEU n 3 70 ASN n 3 71 HIS n 3 72 MET n 3 73 ASP n 3 74 ASP n 3 75 HIS n 3 76 THR n 3 77 LEU n 3 78 PRO n 3 79 GLY n 3 80 LYS n 3 81 TYR n 3 82 GLY n 3 83 ILE n 3 84 GLY n 3 85 PHE n 3 86 THR n 3 87 ASN n 3 88 MET n 3 89 VAL n 3 90 GLU n 3 91 ARG n 3 92 THR n 3 93 THR n 3 94 PRO n 3 95 GLY n 3 96 SER n 3 97 LYS n 3 98 ASP n 3 99 LEU n 3 100 SER n 3 101 SER n 3 102 LYS n 3 103 GLU n 3 104 PHE n 3 105 ARG n 3 106 GLU n 3 107 GLY n 3 108 GLY n 3 109 ARG n 3 110 ILE n 3 111 LEU n 3 112 VAL n 3 113 GLN n 3 114 LYS n 3 115 LEU n 3 116 GLN n 3 117 LYS n 3 118 TYR n 3 119 GLN n 3 120 PRO n 3 121 ARG n 3 122 ILE n 3 123 ALA n 3 124 VAL n 3 125 PHE n 3 126 ASN n 3 127 GLY n 3 128 LYS n 3 129 CYS n 3 130 ILE n 3 131 TYR n 3 132 GLU n 3 133 ILE n 3 134 PHE n 3 135 SER n 3 136 LYS n 3 137 GLU n 3 138 VAL n 3 139 PHE n 3 140 GLY n 3 141 VAL n 3 142 LYS n 3 143 VAL n 3 144 LYS n 3 145 ASN n 3 146 LEU n 3 147 GLU n 3 148 PHE n 3 149 GLY n 3 150 LEU n 3 151 GLN n 3 152 PRO n 3 153 HIS n 3 154 LYS n 3 155 ILE n 3 156 PRO n 3 157 ASP n 3 158 THR n 3 159 GLU n 3 160 THR n 3 161 LEU n 3 162 CYS n 3 163 TYR n 3 164 VAL n 3 165 MET n 3 166 PRO n 3 167 SER n 3 168 SER n 3 169 SER n 3 170 ALA n 3 171 ARG n 3 172 CYS n 3 173 ALA n 3 174 GLN n 3 175 PHE n 3 176 PRO n 3 177 ARG n 3 178 ALA n 3 179 GLN n 3 180 ASP n 3 181 LYS n 3 182 VAL n 3 183 HIS n 3 184 TYR n 3 185 TYR n 3 186 ILE n 3 187 LYS n 3 188 LEU n 3 189 LYS n 3 190 ASP n 3 191 LEU n 3 192 ARG n 3 193 ASP n 3 194 GLN n 3 195 LEU n 3 196 LYS n 3 197 GLY n 3 198 ILE n 3 199 GLU n 3 200 ARG n 3 201 ASN n 3 202 MET n 3 203 ASP n 3 204 VAL n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TDG _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP TDG_HUMAN Q13569 3 ;FNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFT NMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMP SSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV ; 111 ? 2 PDB 2RBA 2RBA 1 CAGCTCTGTACGTGAGCAGTGGA 1 ? 3 PDB 2RBA 2RBA 2 'CCACTGCTCA(3DR)GTACAGAGCTGT' 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2RBA A 7 ? 204 ? Q13569 111 ? 308 ? 111 308 2 1 2RBA B 7 ? 204 ? Q13569 111 ? 308 ? 111 308 3 2 2RBA C 1 ? 23 ? 2RBA 1 ? 23 ? 1 23 4 3 2RBA D 1 ? 23 ? 2RBA 1 ? 23 ? 1 23 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2RBA GLY A 1 ? UNP Q13569 ? ? 'expression tag' 105 1 1 2RBA SER A 2 ? UNP Q13569 ? ? 'expression tag' 106 2 1 2RBA HIS A 3 ? UNP Q13569 ? ? 'expression tag' 107 3 1 2RBA MET A 4 ? UNP Q13569 ? ? 'expression tag' 108 4 1 2RBA ALA A 5 ? UNP Q13569 ? ? 'expression tag' 109 5 1 2RBA SER A 6 ? UNP Q13569 ? ? 'expression tag' 110 6 2 2RBA GLY B 1 ? UNP Q13569 ? ? 'expression tag' 105 7 2 2RBA SER B 2 ? UNP Q13569 ? ? 'expression tag' 106 8 2 2RBA HIS B 3 ? UNP Q13569 ? ? 'expression tag' 107 9 2 2RBA MET B 4 ? UNP Q13569 ? ? 'expression tag' 108 10 2 2RBA ALA B 5 ? UNP Q13569 ? ? 'expression tag' 109 11 2 2RBA SER B 6 ? UNP Q13569 ? ? 'expression tag' 110 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3DR 'DNA linking' . "1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE" 'ABASIC DIDEOXYRIBOSE' 'C5 H11 O6 P' 198.111 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2RBA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.54 _exptl_crystal.density_percent_sol 65.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;8 mg/ml protein and 20% molar excess DNA duplex in 10mM Tris-HCL, 100 mM NaCl, 0.5mM DTT. Reservoir: 20% PEG 3350, 0.2M K/Na tartrate tetrahydrate, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 Tris-HCL ? ? ? 1 2 1 NaCl ? ? ? 1 3 1 DTT ? ? ? 1 4 2 'PEG 3350' ? ? ? 1 5 2 'K/Na tartrate tetrahydrate' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 105 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-02-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91837 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91837 # _reflns.entry_id 2RBA _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.79 _reflns.d_resolution_low 50.0 _reflns.number_all 21137 _reflns.number_obs 21137 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rsym_value 0.083 _reflns.pdbx_netI_over_sigmaI 25.5 _reflns.B_iso_Wilson_estimate 87.2 _reflns.pdbx_redundancy 10.4 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.79 _reflns_shell.d_res_low 2.89 _reflns_shell.percent_possible_all 96.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.0 _reflns_shell.pdbx_redundancy 7.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2031 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2RBA _refine.ls_number_reflns_obs 19458 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.79 _refine.ls_percent_reflns_obs 97.49 _refine.ls_R_factor_obs 0.23211 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22965 _refine.ls_R_factor_R_free 0.27629 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1048 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.B_iso_mean 110.074 _refine.aniso_B[1][1] -4.52 _refine.aniso_B[2][2] -4.52 _refine.aniso_B[3][3] 6.78 _refine.aniso_B[1][2] -2.26 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1wyw, SUMO removed' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.642 _refine.pdbx_overall_ESU_R_Free 0.353 _refine.overall_SU_ML 0.314 _refine.overall_SU_B 35.695 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2RBA _refine_analyze.Luzzati_coordinate_error_obs 0.642 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.353 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2916 _refine_hist.pdbx_number_atoms_nucleic_acid 929 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3845 _refine_hist.d_res_high 2.79 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.021 ? 4132 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.272 2.262 ? 5635 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.620 5.000 ? 362 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.864 23.731 ? 134 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 22.542 15.000 ? 540 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 24.614 15.000 ? 16 'X-RAY DIFFRACTION' ? r_chiral_restr 0.170 0.200 ? 608 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 2730 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.290 0.200 ? 2285 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.338 0.200 ? 2612 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.208 0.200 ? 154 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.289 0.200 ? 58 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.246 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.978 1.500 ? 1851 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.660 2.000 ? 2928 'X-RAY DIFFRACTION' ? r_scbond_it 1.839 3.000 ? 2881 'X-RAY DIFFRACTION' ? r_scangle_it 2.984 4.500 ? 2707 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.79 _refine_ls_shell.d_res_low 2.875 _refine_ls_shell.number_reflns_R_work 1190 _refine_ls_shell.R_factor_R_work 0.313 _refine_ls_shell.percent_reflns_obs 82.96 _refine_ls_shell.R_factor_R_free 0.341 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2RBA _struct.title 'Structure of Human Thymine DNA Glycosylase Bound to Abasic and Undamaged DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RBA _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, DNA damage, DNA repair, Glycosidase, Hydrolase, Nucleus, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY C 38 ? GLY C 45 ? GLY A 142 GLY A 149 1 ? 8 HELX_P HELX_P2 2 HIS C 54 ? SER C 62 ? HIS A 158 SER A 166 1 ? 9 HELX_P HELX_P3 3 ASP C 73 ? HIS C 75 ? ASP A 177 HIS A 179 5 ? 3 HELX_P HELX_P4 4 THR C 76 ? GLY C 82 ? THR A 180 GLY A 186 1 ? 7 HELX_P HELX_P5 5 SER C 100 ? GLN C 119 ? SER A 204 GLN A 223 1 ? 20 HELX_P HELX_P6 6 GLY C 127 ? PHE C 139 ? GLY A 231 PHE A 243 1 ? 13 HELX_P HELX_P7 7 ARG C 177 ? ASP C 180 ? ARG A 281 ASP A 284 5 ? 4 HELX_P HELX_P8 8 LYS C 181 ? LYS C 196 ? LYS A 285 LYS A 300 1 ? 16 HELX_P HELX_P9 9 GLY D 38 ? GLY D 45 ? GLY B 142 GLY B 149 1 ? 8 HELX_P HELX_P10 10 HIS D 54 ? SER D 62 ? HIS B 158 SER B 166 1 ? 9 HELX_P HELX_P11 11 ASN D 70 ? HIS D 75 ? ASN B 174 HIS B 179 5 ? 6 HELX_P HELX_P12 12 THR D 76 ? GLY D 82 ? THR B 180 GLY B 186 1 ? 7 HELX_P HELX_P13 13 GLY D 95 ? LEU D 99 ? GLY B 199 LEU B 203 5 ? 5 HELX_P HELX_P14 14 SER D 100 ? GLN D 119 ? SER B 204 GLN B 223 1 ? 20 HELX_P HELX_P15 15 GLY D 127 ? LYS D 136 ? GLY B 231 LYS B 240 1 ? 10 HELX_P HELX_P16 16 LYS D 181 ? ILE D 198 ? LYS B 285 ILE B 302 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 10 "O3'" ? ? ? 1_555 B 3DR 11 P ? ? D DA 10 D 3DR 11 1_555 ? ? ? ? ? ? ? 1.620 ? ? covale2 covale both ? B 3DR 11 "O3'" ? ? ? 1_555 B DG 12 P ? ? D 3DR 11 D DG 12 1_555 ? ? ? ? ? ? ? 1.611 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 22 N1 ? ? C DC 1 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 22 O6 ? ? C DC 1 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 22 N2 ? ? C DC 1 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 21 N3 ? ? C DA 2 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 21 O4 ? ? C DA 2 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 20 N3 ? ? C DG 3 D DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 20 O2 ? ? C DG 3 D DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 20 N4 ? ? C DG 3 D DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 19 N1 ? ? C DC 4 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 19 O6 ? ? C DC 4 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 19 N2 ? ? C DC 4 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 18 N1 ? ? C DT 5 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 18 N6 ? ? C DT 5 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 17 N1 ? ? C DC 6 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 17 O6 ? ? C DC 6 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 17 N2 ? ? C DC 6 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 16 N1 ? ? C DT 7 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 16 N6 ? ? C DT 7 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 7 O2 ? ? ? 1_555 B DG 17 N2 ? ? C DT 7 D DG 17 1_555 ? ? ? ? ? ? 'DT-DG MISPAIR' ? ? ? hydrog20 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 15 N3 ? ? C DG 8 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 15 O2 ? ? C DG 8 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 15 N4 ? ? C DG 8 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 14 N1 ? ? C DT 9 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 14 N6 ? ? C DT 9 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 13 N3 ? ? C DA 10 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 13 O4 ? ? C DA 10 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 12 N1 ? ? C DC 11 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 12 O6 ? ? C DC 11 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 12 N2 ? ? C DC 11 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DC 9 N4 ? ? C DT 13 D DC 9 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog31 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 10 N1 ? ? C DT 13 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 10 N6 ? ? C DT 13 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 14 N1 ? ? ? 1_555 B DC 9 N3 ? ? C DG 14 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 14 N2 ? ? ? 1_555 B DC 9 O2 ? ? C DG 14 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 9 N4 ? ? C DG 14 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DA 15 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 15 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DA 15 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 15 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 7 N3 ? ? C DG 16 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 7 O2 ? ? C DG 16 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 7 N4 ? ? C DG 16 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 17 N3 ? ? ? 1_555 B DG 6 N1 ? ? C DC 17 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 17 N4 ? ? ? 1_555 B DG 6 O6 ? ? C DC 17 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 17 O2 ? ? ? 1_555 B DG 6 N2 ? ? C DC 17 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DA 18 N1 ? ? ? 1_555 B DT 5 N3 ? ? C DA 18 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DA 18 N6 ? ? ? 1_555 B DT 5 O4 ? ? C DA 18 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 19 N1 ? ? ? 1_555 B DC 4 N3 ? ? C DG 19 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DG 19 N2 ? ? ? 1_555 B DC 4 O2 ? ? C DG 19 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DG 19 O6 ? ? ? 1_555 B DC 4 N4 ? ? C DG 19 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DT 20 N3 ? ? ? 1_555 B DA 3 N1 ? ? C DT 20 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DT 20 O4 ? ? ? 1_555 B DA 3 N6 ? ? C DT 20 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DG 21 N1 ? ? ? 1_555 B DC 2 N3 ? ? C DG 21 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DG 21 N2 ? ? ? 1_555 B DC 2 O2 ? ? C DG 21 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DG 21 O6 ? ? ? 1_555 B DC 2 N4 ? ? C DG 21 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 50 C . ? GLY 154 A PRO 51 C ? PRO 155 A 1 -28.59 2 PRO 51 C . ? PRO 155 A GLY 52 C ? GLY 156 A 1 6.87 3 GLY 95 C . ? GLY 199 A SER 96 C ? SER 200 A 1 13.57 4 GLY 197 C . ? GLY 301 A ILE 198 C ? ILE 302 A 1 21.54 5 ILE 198 C . ? ILE 302 A GLU 199 C ? GLU 303 A 1 24.34 6 GLY 50 D . ? GLY 154 B PRO 51 D ? PRO 155 B 1 -15.11 7 GLN 174 D . ? GLN 278 B PHE 175 D ? PHE 279 B 1 26.86 8 PHE 175 D . ? PHE 279 B PRO 176 D ? PRO 280 B 1 9.70 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? parallel B 2 3 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE C 30 ? GLY C 34 ? ILE A 134 GLY A 138 A 2 ILE C 83 ? ASN C 87 ? ILE A 187 ASN A 191 B 1 ILE C 122 ? ASN C 126 ? ILE A 226 ASN A 230 B 2 LEU C 161 ? MET C 165 ? LEU A 265 MET A 269 B 3 GLY C 149 ? LEU C 150 ? GLY A 253 LEU A 254 C 1 ILE D 83 ? ASN D 87 ? ILE B 187 ASN B 191 C 2 ILE D 30 ? GLY D 34 ? ILE B 134 GLY B 138 C 3 ILE D 122 ? ASN D 126 ? ILE B 226 ASN B 230 C 4 LEU D 161 ? MET D 165 ? LEU B 265 MET B 269 C 5 GLY D 149 ? LYS D 154 ? GLY B 253 LYS B 258 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY C 34 ? N GLY A 138 O THR C 86 ? O THR A 190 B 1 2 N ALA C 123 ? N ALA A 227 O LEU C 161 ? O LEU A 265 B 2 3 O VAL C 164 ? O VAL A 268 N GLY C 149 ? N GLY A 253 C 1 2 O GLY D 84 ? O GLY B 188 N ILE D 32 ? N ILE B 136 C 2 3 N VAL D 31 ? N VAL B 135 O VAL D 124 ? O VAL B 228 C 3 4 N ALA D 123 ? N ALA B 227 O LEU D 161 ? O LEU B 265 C 4 5 O CYS D 162 ? O CYS B 266 N GLN D 151 ? N GLN B 255 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id D _struct_site.pdbx_auth_comp_id 3DR _struct_site.pdbx_auth_seq_id 11 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE 3DR D 11' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ASN C 36 ? ASN A 140 . ? 1_555 ? 2 AC1 8 GLY C 38 ? GLY A 142 . ? 1_555 ? 3 AC1 8 GLY C 52 ? GLY A 156 . ? 1_555 ? 4 AC1 8 ASN C 53 ? ASN A 157 . ? 1_555 ? 5 AC1 8 SER C 96 ? SER A 200 . ? 1_555 ? 6 AC1 8 SER C 169 ? SER A 273 . ? 1_555 ? 7 AC1 8 DA B 10 ? DA D 10 . ? 1_555 ? 8 AC1 8 DG B 12 ? DG D 12 . ? 1_555 ? # _database_PDB_matrix.entry_id 2RBA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2RBA _atom_sites.fract_transf_matrix[1][1] 0.006168 _atom_sites.fract_transf_matrix[1][2] 0.003561 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007122 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017812 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC C . n A 1 2 DA 2 2 2 DA DA C . n A 1 3 DG 3 3 3 DG DG C . n A 1 4 DC 4 4 4 DC DC C . n A 1 5 DT 5 5 5 DT DT C . n A 1 6 DC 6 6 6 DC DC C . n A 1 7 DT 7 7 7 DT DT C . n A 1 8 DG 8 8 8 DG DG C . n A 1 9 DT 9 9 9 DT DT C . n A 1 10 DA 10 10 10 DA DA C . n A 1 11 DC 11 11 11 DC DC C . n A 1 12 DG 12 12 12 DG DG C . n A 1 13 DT 13 13 13 DT DT C . n A 1 14 DG 14 14 14 DG DG C . n A 1 15 DA 15 15 15 DA DA C . n A 1 16 DG 16 16 16 DG DG C . n A 1 17 DC 17 17 17 DC DC C . n A 1 18 DA 18 18 18 DA DA C . n A 1 19 DG 19 19 19 DG DG C . n A 1 20 DT 20 20 20 DT DT C . n A 1 21 DG 21 21 21 DG DG C . n A 1 22 DG 22 22 22 DG DG C . n A 1 23 DA 23 23 23 DA DA C . n B 2 1 DC 1 1 1 DC DC D . n B 2 2 DC 2 2 2 DC DC D . n B 2 3 DA 3 3 3 DA DA D . n B 2 4 DC 4 4 4 DC DC D . n B 2 5 DT 5 5 5 DT DT D . n B 2 6 DG 6 6 6 DG DG D . n B 2 7 DC 7 7 7 DC DC D . n B 2 8 DT 8 8 8 DT DT D . n B 2 9 DC 9 9 9 DC DC D . n B 2 10 DA 10 10 10 DA DA D . n B 2 11 3DR 11 11 11 3DR 3DR D . n B 2 12 DG 12 12 12 DG DG D . n B 2 13 DT 13 13 13 DT DT D . n B 2 14 DA 14 14 14 DA DA D . n B 2 15 DC 15 15 15 DC DC D . n B 2 16 DA 16 16 16 DA DA D . n B 2 17 DG 17 17 17 DG DG D . n B 2 18 DA 18 18 18 DA DA D . n B 2 19 DG 19 19 19 DG DG D . n B 2 20 DC 20 20 20 DC DC D . n B 2 21 DT 21 21 21 DT DT D . n B 2 22 DG 22 22 22 DG DG D . n B 2 23 DT 23 23 23 DT DT D . n C 3 1 GLY 1 105 ? ? ? A . n C 3 2 SER 2 106 ? ? ? A . n C 3 3 HIS 3 107 ? ? ? A . n C 3 4 MET 4 108 ? ? ? A . n C 3 5 ALA 5 109 ? ? ? A . n C 3 6 SER 6 110 ? ? ? A . n C 3 7 PHE 7 111 ? ? ? A . n C 3 8 ASN 8 112 ? ? ? A . n C 3 9 GLY 9 113 ? ? ? A . n C 3 10 VAL 10 114 ? ? ? A . n C 3 11 SER 11 115 ? ? ? A . n C 3 12 GLU 12 116 ? ? ? A . n C 3 13 ALA 13 117 ? ? ? A . n C 3 14 GLU 14 118 ? ? ? A . n C 3 15 LEU 15 119 ? ? ? A . n C 3 16 LEU 16 120 ? ? ? A . n C 3 17 THR 17 121 ? ? ? A . n C 3 18 LYS 18 122 ? ? ? A . n C 3 19 THR 19 123 123 THR THR A . n C 3 20 LEU 20 124 124 LEU LEU A . n C 3 21 PRO 21 125 125 PRO PRO A . n C 3 22 ASP 22 126 126 ASP ASP A . n C 3 23 ILE 23 127 127 ILE ILE A . n C 3 24 LEU 24 128 128 LEU LEU A . n C 3 25 THR 25 129 129 THR THR A . n C 3 26 PHE 26 130 130 PHE PHE A . n C 3 27 ASN 27 131 131 ASN ASN A . n C 3 28 LEU 28 132 132 LEU LEU A . n C 3 29 ASP 29 133 133 ASP ASP A . n C 3 30 ILE 30 134 134 ILE ILE A . n C 3 31 VAL 31 135 135 VAL VAL A . n C 3 32 ILE 32 136 136 ILE ILE A . n C 3 33 ILE 33 137 137 ILE ILE A . n C 3 34 GLY 34 138 138 GLY GLY A . n C 3 35 ILE 35 139 139 ILE ILE A . n C 3 36 ASN 36 140 140 ASN ASN A . n C 3 37 PRO 37 141 141 PRO PRO A . n C 3 38 GLY 38 142 142 GLY GLY A . n C 3 39 LEU 39 143 143 LEU LEU A . n C 3 40 MET 40 144 144 MET MET A . n C 3 41 ALA 41 145 145 ALA ALA A . n C 3 42 ALA 42 146 146 ALA ALA A . n C 3 43 TYR 43 147 147 TYR TYR A . n C 3 44 LYS 44 148 148 LYS LYS A . n C 3 45 GLY 45 149 149 GLY GLY A . n C 3 46 HIS 46 150 150 HIS HIS A . n C 3 47 HIS 47 151 151 HIS HIS A . n C 3 48 TYR 48 152 152 TYR TYR A . n C 3 49 PRO 49 153 153 PRO PRO A . n C 3 50 GLY 50 154 154 GLY GLY A . n C 3 51 PRO 51 155 155 PRO PRO A . n C 3 52 GLY 52 156 156 GLY GLY A . n C 3 53 ASN 53 157 157 ASN ASN A . n C 3 54 HIS 54 158 158 HIS HIS A . n C 3 55 PHE 55 159 159 PHE PHE A . n C 3 56 TRP 56 160 160 TRP TRP A . n C 3 57 LYS 57 161 161 LYS LYS A . n C 3 58 CYS 58 162 162 CYS CYS A . n C 3 59 LEU 59 163 163 LEU LEU A . n C 3 60 PHE 60 164 164 PHE PHE A . n C 3 61 MET 61 165 165 MET MET A . n C 3 62 SER 62 166 166 SER SER A . n C 3 63 GLY 63 167 167 GLY GLY A . n C 3 64 LEU 64 168 168 LEU LEU A . n C 3 65 SER 65 169 169 SER SER A . n C 3 66 GLU 66 170 170 GLU GLU A . n C 3 67 VAL 67 171 171 VAL VAL A . n C 3 68 GLN 68 172 172 GLN GLN A . n C 3 69 LEU 69 173 173 LEU LEU A . n C 3 70 ASN 70 174 174 ASN ASN A . n C 3 71 HIS 71 175 175 HIS HIS A . n C 3 72 MET 72 176 176 MET MET A . n C 3 73 ASP 73 177 177 ASP ASP A . n C 3 74 ASP 74 178 178 ASP ASP A . n C 3 75 HIS 75 179 179 HIS HIS A . n C 3 76 THR 76 180 180 THR THR A . n C 3 77 LEU 77 181 181 LEU LEU A . n C 3 78 PRO 78 182 182 PRO PRO A . n C 3 79 GLY 79 183 183 GLY GLY A . n C 3 80 LYS 80 184 184 LYS LYS A . n C 3 81 TYR 81 185 185 TYR TYR A . n C 3 82 GLY 82 186 186 GLY GLY A . n C 3 83 ILE 83 187 187 ILE ILE A . n C 3 84 GLY 84 188 188 GLY GLY A . n C 3 85 PHE 85 189 189 PHE PHE A . n C 3 86 THR 86 190 190 THR THR A . n C 3 87 ASN 87 191 191 ASN ASN A . n C 3 88 MET 88 192 192 MET MET A . n C 3 89 VAL 89 193 193 VAL VAL A . n C 3 90 GLU 90 194 194 GLU GLU A . n C 3 91 ARG 91 195 195 ARG ARG A . n C 3 92 THR 92 196 196 THR THR A . n C 3 93 THR 93 197 197 THR THR A . n C 3 94 PRO 94 198 198 PRO PRO A . n C 3 95 GLY 95 199 199 GLY GLY A . n C 3 96 SER 96 200 200 SER SER A . n C 3 97 LYS 97 201 201 LYS LYS A . n C 3 98 ASP 98 202 202 ASP ASP A . n C 3 99 LEU 99 203 203 LEU LEU A . n C 3 100 SER 100 204 204 SER SER A . n C 3 101 SER 101 205 205 SER SER A . n C 3 102 LYS 102 206 206 LYS LYS A . n C 3 103 GLU 103 207 207 GLU GLU A . n C 3 104 PHE 104 208 208 PHE PHE A . n C 3 105 ARG 105 209 209 ARG ARG A . n C 3 106 GLU 106 210 210 GLU GLU A . n C 3 107 GLY 107 211 211 GLY GLY A . n C 3 108 GLY 108 212 212 GLY GLY A . n C 3 109 ARG 109 213 213 ARG ARG A . n C 3 110 ILE 110 214 214 ILE ILE A . n C 3 111 LEU 111 215 215 LEU LEU A . n C 3 112 VAL 112 216 216 VAL VAL A . n C 3 113 GLN 113 217 217 GLN GLN A . n C 3 114 LYS 114 218 218 LYS LYS A . n C 3 115 LEU 115 219 219 LEU LEU A . n C 3 116 GLN 116 220 220 GLN GLN A . n C 3 117 LYS 117 221 221 LYS LYS A . n C 3 118 TYR 118 222 222 TYR TYR A . n C 3 119 GLN 119 223 223 GLN GLN A . n C 3 120 PRO 120 224 224 PRO PRO A . n C 3 121 ARG 121 225 225 ARG ARG A . n C 3 122 ILE 122 226 226 ILE ILE A . n C 3 123 ALA 123 227 227 ALA ALA A . n C 3 124 VAL 124 228 228 VAL VAL A . n C 3 125 PHE 125 229 229 PHE PHE A . n C 3 126 ASN 126 230 230 ASN ASN A . n C 3 127 GLY 127 231 231 GLY GLY A . n C 3 128 LYS 128 232 232 LYS LYS A . n C 3 129 CYS 129 233 233 CYS CYS A . n C 3 130 ILE 130 234 234 ILE ILE A . n C 3 131 TYR 131 235 235 TYR TYR A . n C 3 132 GLU 132 236 236 GLU GLU A . n C 3 133 ILE 133 237 237 ILE ILE A . n C 3 134 PHE 134 238 238 PHE PHE A . n C 3 135 SER 135 239 239 SER SER A . n C 3 136 LYS 136 240 240 LYS LYS A . n C 3 137 GLU 137 241 241 GLU GLU A . n C 3 138 VAL 138 242 242 VAL VAL A . n C 3 139 PHE 139 243 243 PHE PHE A . n C 3 140 GLY 140 244 244 GLY GLY A . n C 3 141 VAL 141 245 245 VAL VAL A . n C 3 142 LYS 142 246 246 LYS LYS A . n C 3 143 VAL 143 247 247 VAL VAL A . n C 3 144 LYS 144 248 248 LYS LYS A . n C 3 145 ASN 145 249 249 ASN ASN A . n C 3 146 LEU 146 250 250 LEU LEU A . n C 3 147 GLU 147 251 251 GLU GLU A . n C 3 148 PHE 148 252 252 PHE PHE A . n C 3 149 GLY 149 253 253 GLY GLY A . n C 3 150 LEU 150 254 254 LEU LEU A . n C 3 151 GLN 151 255 255 GLN GLN A . n C 3 152 PRO 152 256 256 PRO PRO A . n C 3 153 HIS 153 257 257 HIS HIS A . n C 3 154 LYS 154 258 258 LYS LYS A . n C 3 155 ILE 155 259 259 ILE ILE A . n C 3 156 PRO 156 260 260 PRO PRO A . n C 3 157 ASP 157 261 261 ASP ASP A . n C 3 158 THR 158 262 262 THR THR A . n C 3 159 GLU 159 263 263 GLU GLU A . n C 3 160 THR 160 264 264 THR THR A . n C 3 161 LEU 161 265 265 LEU LEU A . n C 3 162 CYS 162 266 266 CYS CYS A . n C 3 163 TYR 163 267 267 TYR TYR A . n C 3 164 VAL 164 268 268 VAL VAL A . n C 3 165 MET 165 269 269 MET MET A . n C 3 166 PRO 166 270 270 PRO PRO A . n C 3 167 SER 167 271 271 SER SER A . n C 3 168 SER 168 272 272 SER SER A . n C 3 169 SER 169 273 273 SER SER A . n C 3 170 ALA 170 274 274 ALA ALA A . n C 3 171 ARG 171 275 275 ARG ARG A . n C 3 172 CYS 172 276 276 CYS CYS A . n C 3 173 ALA 173 277 277 ALA ALA A . n C 3 174 GLN 174 278 278 GLN GLN A . n C 3 175 PHE 175 279 279 PHE PHE A . n C 3 176 PRO 176 280 280 PRO PRO A . n C 3 177 ARG 177 281 281 ARG ARG A . n C 3 178 ALA 178 282 282 ALA ALA A . n C 3 179 GLN 179 283 283 GLN GLN A . n C 3 180 ASP 180 284 284 ASP ASP A . n C 3 181 LYS 181 285 285 LYS LYS A . n C 3 182 VAL 182 286 286 VAL VAL A . n C 3 183 HIS 183 287 287 HIS HIS A . n C 3 184 TYR 184 288 288 TYR TYR A . n C 3 185 TYR 185 289 289 TYR TYR A . n C 3 186 ILE 186 290 290 ILE ILE A . n C 3 187 LYS 187 291 291 LYS LYS A . n C 3 188 LEU 188 292 292 LEU LEU A . n C 3 189 LYS 189 293 293 LYS LYS A . n C 3 190 ASP 190 294 294 ASP ASP A . n C 3 191 LEU 191 295 295 LEU LEU A . n C 3 192 ARG 192 296 296 ARG ARG A . n C 3 193 ASP 193 297 297 ASP ASP A . n C 3 194 GLN 194 298 298 GLN GLN A . n C 3 195 LEU 195 299 299 LEU LEU A . n C 3 196 LYS 196 300 300 LYS LYS A . n C 3 197 GLY 197 301 301 GLY GLY A . n C 3 198 ILE 198 302 302 ILE ILE A . n C 3 199 GLU 199 303 303 GLU GLU A . n C 3 200 ARG 200 304 304 ARG ARG A . n C 3 201 ASN 201 305 ? ? ? A . n C 3 202 MET 202 306 ? ? ? A . n C 3 203 ASP 203 307 ? ? ? A . n C 3 204 VAL 204 308 ? ? ? A . n D 3 1 GLY 1 105 ? ? ? B . n D 3 2 SER 2 106 ? ? ? B . n D 3 3 HIS 3 107 ? ? ? B . n D 3 4 MET 4 108 ? ? ? B . n D 3 5 ALA 5 109 ? ? ? B . n D 3 6 SER 6 110 ? ? ? B . n D 3 7 PHE 7 111 ? ? ? B . n D 3 8 ASN 8 112 ? ? ? B . n D 3 9 GLY 9 113 ? ? ? B . n D 3 10 VAL 10 114 ? ? ? B . n D 3 11 SER 11 115 ? ? ? B . n D 3 12 GLU 12 116 ? ? ? B . n D 3 13 ALA 13 117 ? ? ? B . n D 3 14 GLU 14 118 ? ? ? B . n D 3 15 LEU 15 119 ? ? ? B . n D 3 16 LEU 16 120 ? ? ? B . n D 3 17 THR 17 121 ? ? ? B . n D 3 18 LYS 18 122 ? ? ? B . n D 3 19 THR 19 123 123 THR THR B . n D 3 20 LEU 20 124 124 LEU LEU B . n D 3 21 PRO 21 125 125 PRO PRO B . n D 3 22 ASP 22 126 126 ASP ASP B . n D 3 23 ILE 23 127 127 ILE ILE B . n D 3 24 LEU 24 128 128 LEU LEU B . n D 3 25 THR 25 129 129 THR THR B . n D 3 26 PHE 26 130 130 PHE PHE B . n D 3 27 ASN 27 131 131 ASN ASN B . n D 3 28 LEU 28 132 132 LEU LEU B . n D 3 29 ASP 29 133 133 ASP ASP B . n D 3 30 ILE 30 134 134 ILE ILE B . n D 3 31 VAL 31 135 135 VAL VAL B . n D 3 32 ILE 32 136 136 ILE ILE B . n D 3 33 ILE 33 137 137 ILE ILE B . n D 3 34 GLY 34 138 138 GLY GLY B . n D 3 35 ILE 35 139 139 ILE ILE B . n D 3 36 ASN 36 140 140 ASN ASN B . n D 3 37 PRO 37 141 141 PRO PRO B . n D 3 38 GLY 38 142 142 GLY GLY B . n D 3 39 LEU 39 143 143 LEU LEU B . n D 3 40 MET 40 144 144 MET MET B . n D 3 41 ALA 41 145 145 ALA ALA B . n D 3 42 ALA 42 146 146 ALA ALA B . n D 3 43 TYR 43 147 147 TYR TYR B . n D 3 44 LYS 44 148 148 LYS LYS B . n D 3 45 GLY 45 149 149 GLY GLY B . n D 3 46 HIS 46 150 150 HIS HIS B . n D 3 47 HIS 47 151 151 HIS HIS B . n D 3 48 TYR 48 152 152 TYR TYR B . n D 3 49 PRO 49 153 153 PRO PRO B . n D 3 50 GLY 50 154 154 GLY GLY B . n D 3 51 PRO 51 155 155 PRO PRO B . n D 3 52 GLY 52 156 156 GLY GLY B . n D 3 53 ASN 53 157 157 ASN ASN B . n D 3 54 HIS 54 158 158 HIS HIS B . n D 3 55 PHE 55 159 159 PHE PHE B . n D 3 56 TRP 56 160 160 TRP TRP B . n D 3 57 LYS 57 161 161 LYS LYS B . n D 3 58 CYS 58 162 162 CYS CYS B . n D 3 59 LEU 59 163 163 LEU LEU B . n D 3 60 PHE 60 164 164 PHE PHE B . n D 3 61 MET 61 165 165 MET MET B . n D 3 62 SER 62 166 166 SER SER B . n D 3 63 GLY 63 167 167 GLY GLY B . n D 3 64 LEU 64 168 168 LEU LEU B . n D 3 65 SER 65 169 169 SER SER B . n D 3 66 GLU 66 170 170 GLU GLU B . n D 3 67 VAL 67 171 171 VAL VAL B . n D 3 68 GLN 68 172 172 GLN GLN B . n D 3 69 LEU 69 173 173 LEU LEU B . n D 3 70 ASN 70 174 174 ASN ASN B . n D 3 71 HIS 71 175 175 HIS HIS B . n D 3 72 MET 72 176 176 MET MET B . n D 3 73 ASP 73 177 177 ASP ASP B . n D 3 74 ASP 74 178 178 ASP ASP B . n D 3 75 HIS 75 179 179 HIS HIS B . n D 3 76 THR 76 180 180 THR THR B . n D 3 77 LEU 77 181 181 LEU LEU B . n D 3 78 PRO 78 182 182 PRO PRO B . n D 3 79 GLY 79 183 183 GLY GLY B . n D 3 80 LYS 80 184 184 LYS LYS B . n D 3 81 TYR 81 185 185 TYR TYR B . n D 3 82 GLY 82 186 186 GLY GLY B . n D 3 83 ILE 83 187 187 ILE ILE B . n D 3 84 GLY 84 188 188 GLY GLY B . n D 3 85 PHE 85 189 189 PHE PHE B . n D 3 86 THR 86 190 190 THR THR B . n D 3 87 ASN 87 191 191 ASN ASN B . n D 3 88 MET 88 192 192 MET MET B . n D 3 89 VAL 89 193 193 VAL VAL B . n D 3 90 GLU 90 194 194 GLU GLU B . n D 3 91 ARG 91 195 195 ARG ARG B . n D 3 92 THR 92 196 196 THR THR B . n D 3 93 THR 93 197 197 THR THR B . n D 3 94 PRO 94 198 198 PRO PRO B . n D 3 95 GLY 95 199 199 GLY GLY B . n D 3 96 SER 96 200 200 SER SER B . n D 3 97 LYS 97 201 201 LYS LYS B . n D 3 98 ASP 98 202 202 ASP ASP B . n D 3 99 LEU 99 203 203 LEU LEU B . n D 3 100 SER 100 204 204 SER SER B . n D 3 101 SER 101 205 205 SER SER B . n D 3 102 LYS 102 206 206 LYS LYS B . n D 3 103 GLU 103 207 207 GLU GLU B . n D 3 104 PHE 104 208 208 PHE PHE B . n D 3 105 ARG 105 209 209 ARG ARG B . n D 3 106 GLU 106 210 210 GLU GLU B . n D 3 107 GLY 107 211 211 GLY GLY B . n D 3 108 GLY 108 212 212 GLY GLY B . n D 3 109 ARG 109 213 213 ARG ARG B . n D 3 110 ILE 110 214 214 ILE ILE B . n D 3 111 LEU 111 215 215 LEU LEU B . n D 3 112 VAL 112 216 216 VAL VAL B . n D 3 113 GLN 113 217 217 GLN GLN B . n D 3 114 LYS 114 218 218 LYS LYS B . n D 3 115 LEU 115 219 219 LEU LEU B . n D 3 116 GLN 116 220 220 GLN GLN B . n D 3 117 LYS 117 221 221 LYS LYS B . n D 3 118 TYR 118 222 222 TYR TYR B . n D 3 119 GLN 119 223 223 GLN GLN B . n D 3 120 PRO 120 224 224 PRO PRO B . n D 3 121 ARG 121 225 225 ARG ARG B . n D 3 122 ILE 122 226 226 ILE ILE B . n D 3 123 ALA 123 227 227 ALA ALA B . n D 3 124 VAL 124 228 228 VAL VAL B . n D 3 125 PHE 125 229 229 PHE PHE B . n D 3 126 ASN 126 230 230 ASN ASN B . n D 3 127 GLY 127 231 231 GLY GLY B . n D 3 128 LYS 128 232 232 LYS LYS B . n D 3 129 CYS 129 233 233 CYS CYS B . n D 3 130 ILE 130 234 234 ILE ILE B . n D 3 131 TYR 131 235 235 TYR TYR B . n D 3 132 GLU 132 236 236 GLU GLU B . n D 3 133 ILE 133 237 237 ILE ILE B . n D 3 134 PHE 134 238 238 PHE PHE B . n D 3 135 SER 135 239 239 SER SER B . n D 3 136 LYS 136 240 240 LYS LYS B . n D 3 137 GLU 137 241 241 GLU GLU B . n D 3 138 VAL 138 242 242 VAL VAL B . n D 3 139 PHE 139 243 243 PHE PHE B . n D 3 140 GLY 140 244 244 GLY GLY B . n D 3 141 VAL 141 245 245 VAL VAL B . n D 3 142 LYS 142 246 246 LYS LYS B . n D 3 143 VAL 143 247 247 VAL VAL B . n D 3 144 LYS 144 248 248 LYS LYS B . n D 3 145 ASN 145 249 249 ASN ASN B . n D 3 146 LEU 146 250 250 LEU LEU B . n D 3 147 GLU 147 251 251 GLU GLU B . n D 3 148 PHE 148 252 252 PHE PHE B . n D 3 149 GLY 149 253 253 GLY GLY B . n D 3 150 LEU 150 254 254 LEU LEU B . n D 3 151 GLN 151 255 255 GLN GLN B . n D 3 152 PRO 152 256 256 PRO PRO B . n D 3 153 HIS 153 257 257 HIS HIS B . n D 3 154 LYS 154 258 258 LYS LYS B . n D 3 155 ILE 155 259 259 ILE ILE B . n D 3 156 PRO 156 260 260 PRO PRO B . n D 3 157 ASP 157 261 261 ASP ASP B . n D 3 158 THR 158 262 262 THR THR B . n D 3 159 GLU 159 263 263 GLU GLU B . n D 3 160 THR 160 264 264 THR THR B . n D 3 161 LEU 161 265 265 LEU LEU B . n D 3 162 CYS 162 266 266 CYS CYS B . n D 3 163 TYR 163 267 267 TYR TYR B . n D 3 164 VAL 164 268 268 VAL VAL B . n D 3 165 MET 165 269 269 MET MET B . n D 3 166 PRO 166 270 270 PRO PRO B . n D 3 167 SER 167 271 271 SER SER B . n D 3 168 SER 168 272 272 SER SER B . n D 3 169 SER 169 273 273 SER SER B . n D 3 170 ALA 170 274 274 ALA ALA B . n D 3 171 ARG 171 275 275 ARG ARG B . n D 3 172 CYS 172 276 276 CYS CYS B . n D 3 173 ALA 173 277 277 ALA ALA B . n D 3 174 GLN 174 278 278 GLN GLN B . n D 3 175 PHE 175 279 279 PHE PHE B . n D 3 176 PRO 176 280 280 PRO PRO B . n D 3 177 ARG 177 281 281 ARG ARG B . n D 3 178 ALA 178 282 282 ALA ALA B . n D 3 179 GLN 179 283 283 GLN GLN B . n D 3 180 ASP 180 284 284 ASP ASP B . n D 3 181 LYS 181 285 285 LYS LYS B . n D 3 182 VAL 182 286 286 VAL VAL B . n D 3 183 HIS 183 287 287 HIS HIS B . n D 3 184 TYR 184 288 288 TYR TYR B . n D 3 185 TYR 185 289 289 TYR TYR B . n D 3 186 ILE 186 290 290 ILE ILE B . n D 3 187 LYS 187 291 291 LYS LYS B . n D 3 188 LEU 188 292 292 LEU LEU B . n D 3 189 LYS 189 293 293 LYS LYS B . n D 3 190 ASP 190 294 294 ASP ASP B . n D 3 191 LEU 191 295 295 LEU LEU B . n D 3 192 ARG 192 296 296 ARG ARG B . n D 3 193 ASP 193 297 297 ASP ASP B . n D 3 194 GLN 194 298 298 GLN GLN B . n D 3 195 LEU 195 299 299 LEU LEU B . n D 3 196 LYS 196 300 300 LYS LYS B . n D 3 197 GLY 197 301 301 GLY GLY B . n D 3 198 ILE 198 302 302 ILE ILE B . n D 3 199 GLU 199 303 303 GLU GLU B . n D 3 200 ARG 200 304 304 ARG ARG B . n D 3 201 ASN 201 305 ? ? ? B . n D 3 202 MET 202 306 ? ? ? B . n D 3 203 ASP 203 307 ? ? ? B . n D 3 204 VAL 204 308 ? ? ? B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 6630 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-06-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -21.0068 67.1852 8.9164 -0.3433 -0.1145 -0.6205 -0.0480 0.0867 -0.0579 11.7360 7.9137 4.7971 2.1910 0.7121 0.1907 -0.1792 0.2806 0.4004 0.0517 -0.0677 0.3295 0.2911 0.1334 0.2470 'X-RAY DIFFRACTION' 2 ? refined -53.9996 44.2230 -2.6299 -0.2852 -0.3558 -0.2116 -0.0761 0.0072 0.0185 7.3777 9.1255 4.1037 4.9075 -0.7801 -0.6857 0.1282 -0.3785 0.7943 0.2534 -0.1940 0.7083 0.0119 0.0234 0.0658 'X-RAY DIFFRACTION' 3 ? refined -7.0550 57.8950 -19.8544 0.1161 1.0736 -1.2766 0.4952 0.2119 -0.0615 21.5799 34.6056 36.0161 16.9812 -26.4868 -22.7736 0.6028 1.8799 -0.8355 0.4344 -1.2229 -0.3002 -1.7653 0.6856 0.6201 'X-RAY DIFFRACTION' 4 ? refined -19.2277 51.4489 -6.1421 0.1131 0.4526 -0.7925 -0.2626 0.2672 -0.7103 22.0189 22.8166 11.3561 -6.2633 -9.1915 3.2710 0.6353 3.5681 -1.7748 -3.1034 0.1750 -0.8894 0.7456 -0.8575 -0.8103 'X-RAY DIFFRACTION' 5 ? refined -36.4736 38.7375 10.3405 0.5945 0.4997 0.6490 -0.2591 -0.2697 0.2332 11.6873 19.8465 0.1625 11.0562 0.9697 0.0399 1.0633 -0.4248 -2.0876 0.9245 0.3010 -1.3715 0.6825 0.0437 -1.3644 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 C 19 C 200 ? A 123 A 304 'X-RAY DIFFRACTION' ? 2 2 D 19 D 200 ? B 123 B 304 'X-RAY DIFFRACTION' ? 3 3 A 1 A 6 ? C 1 C 6 'X-RAY DIFFRACTION' ? 4 3 B 17 B 22 ? D 17 D 22 'X-RAY DIFFRACTION' ? 5 4 A 7 A 12 ? C 7 C 12 'X-RAY DIFFRACTION' ? 6 4 B 11 B 16 ? D 11 D 16 'X-RAY DIFFRACTION' ? 7 5 A 13 A 22 ? C 13 C 22 'X-RAY DIFFRACTION' ? 8 5 B 1 B 10 ? D 1 D 10 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0040 ? 1 Blu-Ice 'data collection' . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 PHASER phasing . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 170 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OH _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 TYR _pdbx_validate_close_contact.auth_seq_id_2 185 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" D DA 14 ? ? "C3'" D DA 14 ? ? 1.380 1.419 -0.039 0.006 N 2 1 CD A LYS 246 ? ? CE A LYS 246 ? ? 1.814 1.508 0.306 0.025 N 3 1 C A VAL 247 ? ? O A VAL 247 ? ? 1.358 1.229 0.129 0.019 N 4 1 CB A CYS 266 ? ? SG A CYS 266 ? ? 1.706 1.812 -0.106 0.016 N 5 1 CA A VAL 268 ? ? CB A VAL 268 ? ? 1.389 1.543 -0.154 0.021 N 6 1 CB B CYS 266 ? ? SG B CYS 266 ? ? 1.702 1.812 -0.110 0.016 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" C DC 1 ? ? "C2'" C DC 1 ? ? "C1'" C DC 1 ? ? 96.60 102.40 -5.80 0.80 N 2 1 "O4'" C DG 3 ? ? "C1'" C DG 3 ? ? N9 C DG 3 ? ? 111.71 108.30 3.41 0.30 N 3 1 "O4'" C DC 4 ? ? "C1'" C DC 4 ? ? N1 C DC 4 ? ? 110.59 108.30 2.29 0.30 N 4 1 "O4'" C DT 5 ? ? "C1'" C DT 5 ? ? N1 C DT 5 ? ? 111.22 108.30 2.92 0.30 N 5 1 "O4'" C DC 6 ? ? "C1'" C DC 6 ? ? N1 C DC 6 ? ? 111.51 108.30 3.21 0.30 N 6 1 C2 C DC 6 ? ? N3 C DC 6 ? ? C4 C DC 6 ? ? 123.00 119.90 3.10 0.50 N 7 1 C4 C DT 7 ? ? C5 C DT 7 ? ? C7 C DT 7 ? ? 122.63 119.00 3.63 0.60 N 8 1 "C3'" C DT 9 ? ? "O3'" C DT 9 ? ? P C DA 10 ? ? 127.12 119.70 7.42 1.20 Y 9 1 "C3'" C DA 10 ? ? "O3'" C DA 10 ? ? P C DC 11 ? ? 128.39 119.70 8.69 1.20 Y 10 1 "O4'" C DC 11 ? ? "C1'" C DC 11 ? ? N1 C DC 11 ? ? 112.97 108.30 4.67 0.30 N 11 1 "O4'" C DG 14 ? ? "C1'" C DG 14 ? ? N9 C DG 14 ? ? 103.70 108.00 -4.30 0.70 N 12 1 "O4'" C DA 15 ? ? "C1'" C DA 15 ? ? N9 C DA 15 ? ? 101.87 108.00 -6.13 0.70 N 13 1 "C3'" C DA 15 ? ? "O3'" C DA 15 ? ? P C DG 16 ? ? 128.04 119.70 8.34 1.20 Y 14 1 "O4'" C DC 17 ? ? "C1'" C DC 17 ? ? N1 C DC 17 ? ? 116.97 108.30 8.67 0.30 N 15 1 "C3'" C DG 21 ? ? "C2'" C DG 21 ? ? "C1'" C DG 21 ? ? 97.45 102.40 -4.95 0.80 N 16 1 C5 C DA 23 ? ? C6 C DA 23 ? ? N1 C DA 23 ? ? 120.70 117.70 3.00 0.50 N 17 1 "C1'" D DC 1 ? ? "O4'" D DC 1 ? ? "C4'" D DC 1 ? ? 103.20 110.10 -6.90 1.00 N 18 1 "O4'" D DC 1 ? ? "C1'" D DC 1 ? ? N1 D DC 1 ? ? 111.32 108.30 3.02 0.30 N 19 1 "C3'" D DC 2 ? ? "O3'" D DC 2 ? ? P D DA 3 ? ? 128.46 119.70 8.76 1.20 Y 20 1 "C3'" D DA 3 ? ? "C2'" D DA 3 ? ? "C1'" D DA 3 ? ? 95.54 102.40 -6.86 0.80 N 21 1 "C3'" D DC 4 ? ? "C2'" D DC 4 ? ? "C1'" D DC 4 ? ? 95.36 102.40 -7.04 0.80 N 22 1 "O4'" D DC 4 ? ? "C1'" D DC 4 ? ? N1 D DC 4 ? ? 114.01 108.30 5.71 0.30 N 23 1 C2 D DC 4 ? ? N3 D DC 4 ? ? C4 D DC 4 ? ? 123.42 119.90 3.52 0.50 N 24 1 N3 D DT 5 ? ? C4 D DT 5 ? ? O4 D DT 5 ? ? 123.68 119.90 3.78 0.60 N 25 1 "O4'" D DC 7 ? ? "C1'" D DC 7 ? ? N1 D DC 7 ? ? 115.08 108.30 6.78 0.30 N 26 1 "O4'" D DT 8 ? ? "C1'" D DT 8 ? ? N1 D DT 8 ? ? 111.55 108.30 3.25 0.30 N 27 1 C2 D DT 8 ? ? N3 D DT 8 ? ? C4 D DT 8 ? ? 122.95 127.20 -4.25 0.60 N 28 1 C5 D DT 8 ? ? C4 D DT 8 ? ? O4 D DT 8 ? ? 120.35 124.90 -4.55 0.70 N 29 1 "C3'" D DT 8 ? ? "O3'" D DT 8 ? ? P D DC 9 ? ? 128.30 119.70 8.60 1.20 Y 30 1 "C1'" D DC 9 ? ? "O4'" D DC 9 ? ? "C4'" D DC 9 ? ? 103.81 110.10 -6.29 1.00 N 31 1 "O4'" D DA 10 ? ? "C1'" D DA 10 ? ? N9 D DA 10 ? ? 113.45 108.30 5.15 0.30 N 32 1 "O4'" D DG 12 ? ? "C4'" D DG 12 ? ? "C3'" D DG 12 ? ? 98.22 104.50 -6.28 0.40 N 33 1 "C3'" D DG 12 ? ? "O3'" D DG 12 ? ? P D DT 13 ? ? 127.10 119.70 7.40 1.20 Y 34 1 "O4'" D DT 13 ? ? "C1'" D DT 13 ? ? "C2'" D DT 13 ? ? 101.01 105.90 -4.89 0.80 N 35 1 C5 D DT 13 ? ? C4 D DT 13 ? ? O4 D DT 13 ? ? 120.45 124.90 -4.45 0.70 N 36 1 "C1'" D DC 15 ? ? "O4'" D DC 15 ? ? "C4'" D DC 15 ? ? 103.31 110.10 -6.79 1.00 N 37 1 "O4'" D DC 15 ? ? "C1'" D DC 15 ? ? N1 D DC 15 ? ? 113.73 108.30 5.43 0.30 N 38 1 C5 D DA 16 ? ? C6 D DA 16 ? ? N1 D DA 16 ? ? 120.82 117.70 3.12 0.50 N 39 1 "C3'" D DA 18 ? ? "O3'" D DA 18 ? ? P D DG 19 ? ? 127.65 119.70 7.95 1.20 Y 40 1 "O4'" D DG 19 ? ? "C1'" D DG 19 ? ? N9 D DG 19 ? ? 113.21 108.30 4.91 0.30 N 41 1 "O4'" D DT 21 ? ? "C1'" D DT 21 ? ? N1 D DT 21 ? ? 111.54 108.30 3.24 0.30 N 42 1 "O4'" D DG 22 ? ? "C1'" D DG 22 ? ? N9 D DG 22 ? ? 111.62 108.30 3.32 0.30 N 43 1 "O4'" D DT 23 ? ? "C1'" D DT 23 ? ? N1 D DT 23 ? ? 110.41 108.30 2.11 0.30 N 44 1 CB A ASP 178 ? ? CG A ASP 178 ? ? OD2 A ASP 178 ? ? 112.13 118.30 -6.17 0.90 N 45 1 C A THR 197 ? ? N A PRO 198 ? ? CA A PRO 198 ? ? 129.43 119.30 10.13 1.50 Y 46 1 CB A ILE 226 ? ? CA A ILE 226 ? ? C A ILE 226 ? ? 99.12 111.60 -12.48 2.00 N 47 1 N A ILE 302 ? ? CA A ILE 302 ? ? C A ILE 302 ? ? 131.75 111.00 20.75 2.70 N 48 1 C B THR 197 ? ? N B PRO 198 ? ? CA B PRO 198 ? ? 131.17 119.30 11.87 1.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 129 ? ? -129.91 -166.67 2 1 ASN A 140 ? ? 167.14 170.52 3 1 HIS A 150 ? ? -172.82 141.46 4 1 LEU A 173 ? ? -124.19 -164.71 5 1 HIS A 175 ? ? -55.10 -8.85 6 1 HIS A 179 ? ? -69.69 2.45 7 1 PRO A 182 ? ? -52.92 -105.63 8 1 THR A 190 ? ? -175.21 -178.51 9 1 SER A 200 ? ? 158.12 -57.16 10 1 LYS A 201 ? ? -71.07 21.07 11 1 LYS A 206 ? ? -29.54 -97.29 12 1 GLU A 207 ? ? 2.88 -71.84 13 1 ASN A 230 ? ? -68.82 97.47 14 1 LYS A 232 ? ? -66.78 -75.71 15 1 ILE A 234 ? ? -61.59 -70.46 16 1 GLU A 241 ? ? -70.38 -70.45 17 1 ASN A 249 ? ? 30.99 68.24 18 1 LEU A 254 ? ? -38.53 143.35 19 1 ASP A 261 ? ? 80.35 44.45 20 1 LYS A 285 ? ? -144.95 -28.39 21 1 LEU A 292 ? ? -27.69 -58.21 22 1 GLN A 298 ? ? -73.06 -74.08 23 1 LEU A 299 ? ? -38.30 -25.60 24 1 LYS A 300 ? ? -80.83 41.94 25 1 ILE A 302 ? ? 59.01 -67.15 26 1 ASN B 140 ? ? 148.53 155.07 27 1 TYR B 152 ? ? 67.55 61.64 28 1 THR B 190 ? ? -178.11 -173.74 29 1 SER B 200 ? ? -31.32 -33.52 30 1 LYS B 201 ? ? -65.68 0.61 31 1 ARG B 209 ? ? -63.88 -71.25 32 1 ASN B 230 ? ? -66.24 94.64 33 1 GLU B 236 ? ? -39.77 -34.61 34 1 GLU B 241 ? ? -167.47 -76.79 35 1 LYS B 246 ? ? -67.59 92.75 36 1 ASN B 249 ? ? 43.94 72.96 37 1 ARG B 275 ? ? -74.71 36.68 38 1 GLN B 278 ? ? -104.66 -110.15 39 1 PHE B 279 ? ? 29.89 64.31 40 1 PRO B 280 ? ? -14.54 135.42 41 1 ARG B 281 ? ? 104.41 110.56 42 1 GLN B 283 ? ? -92.95 31.15 43 1 GLU B 303 ? ? -87.32 35.42 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLY A 156 ? ? ASN A 157 ? ? 136.57 2 1 PRO A 198 ? ? GLY A 199 ? ? 34.93 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CA _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id ILE _pdbx_validate_chiral.auth_seq_id 302 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 105 ? C GLY 1 2 1 Y 1 A SER 106 ? C SER 2 3 1 Y 1 A HIS 107 ? C HIS 3 4 1 Y 1 A MET 108 ? C MET 4 5 1 Y 1 A ALA 109 ? C ALA 5 6 1 Y 1 A SER 110 ? C SER 6 7 1 Y 1 A PHE 111 ? C PHE 7 8 1 Y 1 A ASN 112 ? C ASN 8 9 1 Y 1 A GLY 113 ? C GLY 9 10 1 Y 1 A VAL 114 ? C VAL 10 11 1 Y 1 A SER 115 ? C SER 11 12 1 Y 1 A GLU 116 ? C GLU 12 13 1 Y 1 A ALA 117 ? C ALA 13 14 1 Y 1 A GLU 118 ? C GLU 14 15 1 Y 1 A LEU 119 ? C LEU 15 16 1 Y 1 A LEU 120 ? C LEU 16 17 1 Y 1 A THR 121 ? C THR 17 18 1 Y 1 A LYS 122 ? C LYS 18 19 1 Y 1 A ASN 305 ? C ASN 201 20 1 Y 1 A MET 306 ? C MET 202 21 1 Y 1 A ASP 307 ? C ASP 203 22 1 Y 1 A VAL 308 ? C VAL 204 23 1 Y 1 B GLY 105 ? D GLY 1 24 1 Y 1 B SER 106 ? D SER 2 25 1 Y 1 B HIS 107 ? D HIS 3 26 1 Y 1 B MET 108 ? D MET 4 27 1 Y 1 B ALA 109 ? D ALA 5 28 1 Y 1 B SER 110 ? D SER 6 29 1 Y 1 B PHE 111 ? D PHE 7 30 1 Y 1 B ASN 112 ? D ASN 8 31 1 Y 1 B GLY 113 ? D GLY 9 32 1 Y 1 B VAL 114 ? D VAL 10 33 1 Y 1 B SER 115 ? D SER 11 34 1 Y 1 B GLU 116 ? D GLU 12 35 1 Y 1 B ALA 117 ? D ALA 13 36 1 Y 1 B GLU 118 ? D GLU 14 37 1 Y 1 B LEU 119 ? D LEU 15 38 1 Y 1 B LEU 120 ? D LEU 16 39 1 Y 1 B THR 121 ? D THR 17 40 1 Y 1 B LYS 122 ? D LYS 18 41 1 Y 1 B ASN 305 ? D ASN 201 42 1 Y 1 B MET 306 ? D MET 202 43 1 Y 1 B ASP 307 ? D ASP 203 44 1 Y 1 B VAL 308 ? D VAL 204 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3DR "O5'" O N N 1 3DR P P N N 2 3DR OP1 O N N 3 3DR OP2 O N N 4 3DR OP3 O N N 5 3DR "C2'" C N N 6 3DR "C5'" C N N 7 3DR "C4'" C N R 8 3DR "O4'" O N N 9 3DR "C1'" C N N 10 3DR "C3'" C N S 11 3DR "O3'" O N N 12 3DR HOP2 H N N 13 3DR HOP3 H N N 14 3DR "H2'" H N N 15 3DR "H2''" H N N 16 3DR "H5'" H N N 17 3DR "H5''" H N N 18 3DR "H4'1" H N N 19 3DR "H1'1" H N N 20 3DR "H1'2" H N N 21 3DR "H3'" H N N 22 3DR "HO3'" H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ARG N N N N 37 ARG CA C N S 38 ARG C C N N 39 ARG O O N N 40 ARG CB C N N 41 ARG CG C N N 42 ARG CD C N N 43 ARG NE N N N 44 ARG CZ C N N 45 ARG NH1 N N N 46 ARG NH2 N N N 47 ARG OXT O N N 48 ARG H H N N 49 ARG H2 H N N 50 ARG HA H N N 51 ARG HB2 H N N 52 ARG HB3 H N N 53 ARG HG2 H N N 54 ARG HG3 H N N 55 ARG HD2 H N N 56 ARG HD3 H N N 57 ARG HE H N N 58 ARG HH11 H N N 59 ARG HH12 H N N 60 ARG HH21 H N N 61 ARG HH22 H N N 62 ARG HXT H N N 63 ASN N N N N 64 ASN CA C N S 65 ASN C C N N 66 ASN O O N N 67 ASN CB C N N 68 ASN CG C N N 69 ASN OD1 O N N 70 ASN ND2 N N N 71 ASN OXT O N N 72 ASN H H N N 73 ASN H2 H N N 74 ASN HA H N N 75 ASN HB2 H N N 76 ASN HB3 H N N 77 ASN HD21 H N N 78 ASN HD22 H N N 79 ASN HXT H N N 80 ASP N N N N 81 ASP CA C N S 82 ASP C C N N 83 ASP O O N N 84 ASP CB C N N 85 ASP CG C N N 86 ASP OD1 O N N 87 ASP OD2 O N N 88 ASP OXT O N N 89 ASP H H N N 90 ASP H2 H N N 91 ASP HA H N N 92 ASP HB2 H N N 93 ASP HB3 H N N 94 ASP HD2 H N N 95 ASP HXT H N N 96 CYS N N N N 97 CYS CA C N R 98 CYS C C N N 99 CYS O O N N 100 CYS CB C N N 101 CYS SG S N N 102 CYS OXT O N N 103 CYS H H N N 104 CYS H2 H N N 105 CYS HA H N N 106 CYS HB2 H N N 107 CYS HB3 H N N 108 CYS HG H N N 109 CYS HXT H N N 110 DA OP3 O N N 111 DA P P N N 112 DA OP1 O N N 113 DA OP2 O N N 114 DA "O5'" O N N 115 DA "C5'" C N N 116 DA "C4'" C N R 117 DA "O4'" O N N 118 DA "C3'" C N S 119 DA "O3'" O N N 120 DA "C2'" C N N 121 DA "C1'" C N R 122 DA N9 N Y N 123 DA C8 C Y N 124 DA N7 N Y N 125 DA C5 C Y N 126 DA C6 C Y N 127 DA N6 N N N 128 DA N1 N Y N 129 DA C2 C Y N 130 DA N3 N Y N 131 DA C4 C Y N 132 DA HOP3 H N N 133 DA HOP2 H N N 134 DA "H5'" H N N 135 DA "H5''" H N N 136 DA "H4'" H N N 137 DA "H3'" H N N 138 DA "HO3'" H N N 139 DA "H2'" H N N 140 DA "H2''" H N N 141 DA "H1'" H N N 142 DA H8 H N N 143 DA H61 H N N 144 DA H62 H N N 145 DA H2 H N N 146 DC OP3 O N N 147 DC P P N N 148 DC OP1 O N N 149 DC OP2 O N N 150 DC "O5'" O N N 151 DC "C5'" C N N 152 DC "C4'" C N R 153 DC "O4'" O N N 154 DC "C3'" C N S 155 DC "O3'" O N N 156 DC "C2'" C N N 157 DC "C1'" C N R 158 DC N1 N N N 159 DC C2 C N N 160 DC O2 O N N 161 DC N3 N N N 162 DC C4 C N N 163 DC N4 N N N 164 DC C5 C N N 165 DC C6 C N N 166 DC HOP3 H N N 167 DC HOP2 H N N 168 DC "H5'" H N N 169 DC "H5''" H N N 170 DC "H4'" H N N 171 DC "H3'" H N N 172 DC "HO3'" H N N 173 DC "H2'" H N N 174 DC "H2''" H N N 175 DC "H1'" H N N 176 DC H41 H N N 177 DC H42 H N N 178 DC H5 H N N 179 DC H6 H N N 180 DG OP3 O N N 181 DG P P N N 182 DG OP1 O N N 183 DG OP2 O N N 184 DG "O5'" O N N 185 DG "C5'" C N N 186 DG "C4'" C N R 187 DG "O4'" O N N 188 DG "C3'" C N S 189 DG "O3'" O N N 190 DG "C2'" C N N 191 DG "C1'" C N R 192 DG N9 N Y N 193 DG C8 C Y N 194 DG N7 N Y N 195 DG C5 C Y N 196 DG C6 C N N 197 DG O6 O N N 198 DG N1 N N N 199 DG C2 C N N 200 DG N2 N N N 201 DG N3 N N N 202 DG C4 C Y N 203 DG HOP3 H N N 204 DG HOP2 H N N 205 DG "H5'" H N N 206 DG "H5''" H N N 207 DG "H4'" H N N 208 DG "H3'" H N N 209 DG "HO3'" H N N 210 DG "H2'" H N N 211 DG "H2''" H N N 212 DG "H1'" H N N 213 DG H8 H N N 214 DG H1 H N N 215 DG H21 H N N 216 DG H22 H N N 217 DT OP3 O N N 218 DT P P N N 219 DT OP1 O N N 220 DT OP2 O N N 221 DT "O5'" O N N 222 DT "C5'" C N N 223 DT "C4'" C N R 224 DT "O4'" O N N 225 DT "C3'" C N S 226 DT "O3'" O N N 227 DT "C2'" C N N 228 DT "C1'" C N R 229 DT N1 N N N 230 DT C2 C N N 231 DT O2 O N N 232 DT N3 N N N 233 DT C4 C N N 234 DT O4 O N N 235 DT C5 C N N 236 DT C7 C N N 237 DT C6 C N N 238 DT HOP3 H N N 239 DT HOP2 H N N 240 DT "H5'" H N N 241 DT "H5''" H N N 242 DT "H4'" H N N 243 DT "H3'" H N N 244 DT "HO3'" H N N 245 DT "H2'" H N N 246 DT "H2''" H N N 247 DT "H1'" H N N 248 DT H3 H N N 249 DT H71 H N N 250 DT H72 H N N 251 DT H73 H N N 252 DT H6 H N N 253 GLN N N N N 254 GLN CA C N S 255 GLN C C N N 256 GLN O O N N 257 GLN CB C N N 258 GLN CG C N N 259 GLN CD C N N 260 GLN OE1 O N N 261 GLN NE2 N N N 262 GLN OXT O N N 263 GLN H H N N 264 GLN H2 H N N 265 GLN HA H N N 266 GLN HB2 H N N 267 GLN HB3 H N N 268 GLN HG2 H N N 269 GLN HG3 H N N 270 GLN HE21 H N N 271 GLN HE22 H N N 272 GLN HXT H N N 273 GLU N N N N 274 GLU CA C N S 275 GLU C C N N 276 GLU O O N N 277 GLU CB C N N 278 GLU CG C N N 279 GLU CD C N N 280 GLU OE1 O N N 281 GLU OE2 O N N 282 GLU OXT O N N 283 GLU H H N N 284 GLU H2 H N N 285 GLU HA H N N 286 GLU HB2 H N N 287 GLU HB3 H N N 288 GLU HG2 H N N 289 GLU HG3 H N N 290 GLU HE2 H N N 291 GLU HXT H N N 292 GLY N N N N 293 GLY CA C N N 294 GLY C C N N 295 GLY O O N N 296 GLY OXT O N N 297 GLY H H N N 298 GLY H2 H N N 299 GLY HA2 H N N 300 GLY HA3 H N N 301 GLY HXT H N N 302 HIS N N N N 303 HIS CA C N S 304 HIS C C N N 305 HIS O O N N 306 HIS CB C N N 307 HIS CG C Y N 308 HIS ND1 N Y N 309 HIS CD2 C Y N 310 HIS CE1 C Y N 311 HIS NE2 N Y N 312 HIS OXT O N N 313 HIS H H N N 314 HIS H2 H N N 315 HIS HA H N N 316 HIS HB2 H N N 317 HIS HB3 H N N 318 HIS HD1 H N N 319 HIS HD2 H N N 320 HIS HE1 H N N 321 HIS HE2 H N N 322 HIS HXT H N N 323 ILE N N N N 324 ILE CA C N S 325 ILE C C N N 326 ILE O O N N 327 ILE CB C N S 328 ILE CG1 C N N 329 ILE CG2 C N N 330 ILE CD1 C N N 331 ILE OXT O N N 332 ILE H H N N 333 ILE H2 H N N 334 ILE HA H N N 335 ILE HB H N N 336 ILE HG12 H N N 337 ILE HG13 H N N 338 ILE HG21 H N N 339 ILE HG22 H N N 340 ILE HG23 H N N 341 ILE HD11 H N N 342 ILE HD12 H N N 343 ILE HD13 H N N 344 ILE HXT H N N 345 LEU N N N N 346 LEU CA C N S 347 LEU C C N N 348 LEU O O N N 349 LEU CB C N N 350 LEU CG C N N 351 LEU CD1 C N N 352 LEU CD2 C N N 353 LEU OXT O N N 354 LEU H H N N 355 LEU H2 H N N 356 LEU HA H N N 357 LEU HB2 H N N 358 LEU HB3 H N N 359 LEU HG H N N 360 LEU HD11 H N N 361 LEU HD12 H N N 362 LEU HD13 H N N 363 LEU HD21 H N N 364 LEU HD22 H N N 365 LEU HD23 H N N 366 LEU HXT H N N 367 LYS N N N N 368 LYS CA C N S 369 LYS C C N N 370 LYS O O N N 371 LYS CB C N N 372 LYS CG C N N 373 LYS CD C N N 374 LYS CE C N N 375 LYS NZ N N N 376 LYS OXT O N N 377 LYS H H N N 378 LYS H2 H N N 379 LYS HA H N N 380 LYS HB2 H N N 381 LYS HB3 H N N 382 LYS HG2 H N N 383 LYS HG3 H N N 384 LYS HD2 H N N 385 LYS HD3 H N N 386 LYS HE2 H N N 387 LYS HE3 H N N 388 LYS HZ1 H N N 389 LYS HZ2 H N N 390 LYS HZ3 H N N 391 LYS HXT H N N 392 MET N N N N 393 MET CA C N S 394 MET C C N N 395 MET O O N N 396 MET CB C N N 397 MET CG C N N 398 MET SD S N N 399 MET CE C N N 400 MET OXT O N N 401 MET H H N N 402 MET H2 H N N 403 MET HA H N N 404 MET HB2 H N N 405 MET HB3 H N N 406 MET HG2 H N N 407 MET HG3 H N N 408 MET HE1 H N N 409 MET HE2 H N N 410 MET HE3 H N N 411 MET HXT H N N 412 PHE N N N N 413 PHE CA C N S 414 PHE C C N N 415 PHE O O N N 416 PHE CB C N N 417 PHE CG C Y N 418 PHE CD1 C Y N 419 PHE CD2 C Y N 420 PHE CE1 C Y N 421 PHE CE2 C Y N 422 PHE CZ C Y N 423 PHE OXT O N N 424 PHE H H N N 425 PHE H2 H N N 426 PHE HA H N N 427 PHE HB2 H N N 428 PHE HB3 H N N 429 PHE HD1 H N N 430 PHE HD2 H N N 431 PHE HE1 H N N 432 PHE HE2 H N N 433 PHE HZ H N N 434 PHE HXT H N N 435 PRO N N N N 436 PRO CA C N S 437 PRO C C N N 438 PRO O O N N 439 PRO CB C N N 440 PRO CG C N N 441 PRO CD C N N 442 PRO OXT O N N 443 PRO H H N N 444 PRO HA H N N 445 PRO HB2 H N N 446 PRO HB3 H N N 447 PRO HG2 H N N 448 PRO HG3 H N N 449 PRO HD2 H N N 450 PRO HD3 H N N 451 PRO HXT H N N 452 SER N N N N 453 SER CA C N S 454 SER C C N N 455 SER O O N N 456 SER CB C N N 457 SER OG O N N 458 SER OXT O N N 459 SER H H N N 460 SER H2 H N N 461 SER HA H N N 462 SER HB2 H N N 463 SER HB3 H N N 464 SER HG H N N 465 SER HXT H N N 466 THR N N N N 467 THR CA C N S 468 THR C C N N 469 THR O O N N 470 THR CB C N R 471 THR OG1 O N N 472 THR CG2 C N N 473 THR OXT O N N 474 THR H H N N 475 THR H2 H N N 476 THR HA H N N 477 THR HB H N N 478 THR HG1 H N N 479 THR HG21 H N N 480 THR HG22 H N N 481 THR HG23 H N N 482 THR HXT H N N 483 TRP N N N N 484 TRP CA C N S 485 TRP C C N N 486 TRP O O N N 487 TRP CB C N N 488 TRP CG C Y N 489 TRP CD1 C Y N 490 TRP CD2 C Y N 491 TRP NE1 N Y N 492 TRP CE2 C Y N 493 TRP CE3 C Y N 494 TRP CZ2 C Y N 495 TRP CZ3 C Y N 496 TRP CH2 C Y N 497 TRP OXT O N N 498 TRP H H N N 499 TRP H2 H N N 500 TRP HA H N N 501 TRP HB2 H N N 502 TRP HB3 H N N 503 TRP HD1 H N N 504 TRP HE1 H N N 505 TRP HE3 H N N 506 TRP HZ2 H N N 507 TRP HZ3 H N N 508 TRP HH2 H N N 509 TRP HXT H N N 510 TYR N N N N 511 TYR CA C N S 512 TYR C C N N 513 TYR O O N N 514 TYR CB C N N 515 TYR CG C Y N 516 TYR CD1 C Y N 517 TYR CD2 C Y N 518 TYR CE1 C Y N 519 TYR CE2 C Y N 520 TYR CZ C Y N 521 TYR OH O N N 522 TYR OXT O N N 523 TYR H H N N 524 TYR H2 H N N 525 TYR HA H N N 526 TYR HB2 H N N 527 TYR HB3 H N N 528 TYR HD1 H N N 529 TYR HD2 H N N 530 TYR HE1 H N N 531 TYR HE2 H N N 532 TYR HH H N N 533 TYR HXT H N N 534 VAL N N N N 535 VAL CA C N S 536 VAL C C N N 537 VAL O O N N 538 VAL CB C N N 539 VAL CG1 C N N 540 VAL CG2 C N N 541 VAL OXT O N N 542 VAL H H N N 543 VAL H2 H N N 544 VAL HA H N N 545 VAL HB H N N 546 VAL HG11 H N N 547 VAL HG12 H N N 548 VAL HG13 H N N 549 VAL HG21 H N N 550 VAL HG22 H N N 551 VAL HG23 H N N 552 VAL HXT H N N 553 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3DR "O5'" P sing N N 1 3DR "O5'" "C5'" sing N N 2 3DR P OP1 doub N N 3 3DR P OP2 sing N N 4 3DR P OP3 sing N N 5 3DR OP2 HOP2 sing N N 6 3DR OP3 HOP3 sing N N 7 3DR "C2'" "C1'" sing N N 8 3DR "C2'" "C3'" sing N N 9 3DR "C2'" "H2'" sing N N 10 3DR "C2'" "H2''" sing N N 11 3DR "C5'" "C4'" sing N N 12 3DR "C5'" "H5'" sing N N 13 3DR "C5'" "H5''" sing N N 14 3DR "C4'" "O4'" sing N N 15 3DR "C4'" "C3'" sing N N 16 3DR "C4'" "H4'1" sing N N 17 3DR "O4'" "C1'" sing N N 18 3DR "C1'" "H1'1" sing N N 19 3DR "C1'" "H1'2" sing N N 20 3DR "C3'" "O3'" sing N N 21 3DR "C3'" "H3'" sing N N 22 3DR "O3'" "HO3'" sing N N 23 ALA N CA sing N N 24 ALA N H sing N N 25 ALA N H2 sing N N 26 ALA CA C sing N N 27 ALA CA CB sing N N 28 ALA CA HA sing N N 29 ALA C O doub N N 30 ALA C OXT sing N N 31 ALA CB HB1 sing N N 32 ALA CB HB2 sing N N 33 ALA CB HB3 sing N N 34 ALA OXT HXT sing N N 35 ARG N CA sing N N 36 ARG N H sing N N 37 ARG N H2 sing N N 38 ARG CA C sing N N 39 ARG CA CB sing N N 40 ARG CA HA sing N N 41 ARG C O doub N N 42 ARG C OXT sing N N 43 ARG CB CG sing N N 44 ARG CB HB2 sing N N 45 ARG CB HB3 sing N N 46 ARG CG CD sing N N 47 ARG CG HG2 sing N N 48 ARG CG HG3 sing N N 49 ARG CD NE sing N N 50 ARG CD HD2 sing N N 51 ARG CD HD3 sing N N 52 ARG NE CZ sing N N 53 ARG NE HE sing N N 54 ARG CZ NH1 sing N N 55 ARG CZ NH2 doub N N 56 ARG NH1 HH11 sing N N 57 ARG NH1 HH12 sing N N 58 ARG NH2 HH21 sing N N 59 ARG NH2 HH22 sing N N 60 ARG OXT HXT sing N N 61 ASN N CA sing N N 62 ASN N H sing N N 63 ASN N H2 sing N N 64 ASN CA C sing N N 65 ASN CA CB sing N N 66 ASN CA HA sing N N 67 ASN C O doub N N 68 ASN C OXT sing N N 69 ASN CB CG sing N N 70 ASN CB HB2 sing N N 71 ASN CB HB3 sing N N 72 ASN CG OD1 doub N N 73 ASN CG ND2 sing N N 74 ASN ND2 HD21 sing N N 75 ASN ND2 HD22 sing N N 76 ASN OXT HXT sing N N 77 ASP N CA sing N N 78 ASP N H sing N N 79 ASP N H2 sing N N 80 ASP CA C sing N N 81 ASP CA CB sing N N 82 ASP CA HA sing N N 83 ASP C O doub N N 84 ASP C OXT sing N N 85 ASP CB CG sing N N 86 ASP CB HB2 sing N N 87 ASP CB HB3 sing N N 88 ASP CG OD1 doub N N 89 ASP CG OD2 sing N N 90 ASP OD2 HD2 sing N N 91 ASP OXT HXT sing N N 92 CYS N CA sing N N 93 CYS N H sing N N 94 CYS N H2 sing N N 95 CYS CA C sing N N 96 CYS CA CB sing N N 97 CYS CA HA sing N N 98 CYS C O doub N N 99 CYS C OXT sing N N 100 CYS CB SG sing N N 101 CYS CB HB2 sing N N 102 CYS CB HB3 sing N N 103 CYS SG HG sing N N 104 CYS OXT HXT sing N N 105 DA OP3 P sing N N 106 DA OP3 HOP3 sing N N 107 DA P OP1 doub N N 108 DA P OP2 sing N N 109 DA P "O5'" sing N N 110 DA OP2 HOP2 sing N N 111 DA "O5'" "C5'" sing N N 112 DA "C5'" "C4'" sing N N 113 DA "C5'" "H5'" sing N N 114 DA "C5'" "H5''" sing N N 115 DA "C4'" "O4'" sing N N 116 DA "C4'" "C3'" sing N N 117 DA "C4'" "H4'" sing N N 118 DA "O4'" "C1'" sing N N 119 DA "C3'" "O3'" sing N N 120 DA "C3'" "C2'" sing N N 121 DA "C3'" "H3'" sing N N 122 DA "O3'" "HO3'" sing N N 123 DA "C2'" "C1'" sing N N 124 DA "C2'" "H2'" sing N N 125 DA "C2'" "H2''" sing N N 126 DA "C1'" N9 sing N N 127 DA "C1'" "H1'" sing N N 128 DA N9 C8 sing Y N 129 DA N9 C4 sing Y N 130 DA C8 N7 doub Y N 131 DA C8 H8 sing N N 132 DA N7 C5 sing Y N 133 DA C5 C6 sing Y N 134 DA C5 C4 doub Y N 135 DA C6 N6 sing N N 136 DA C6 N1 doub Y N 137 DA N6 H61 sing N N 138 DA N6 H62 sing N N 139 DA N1 C2 sing Y N 140 DA C2 N3 doub Y N 141 DA C2 H2 sing N N 142 DA N3 C4 sing Y N 143 DC OP3 P sing N N 144 DC OP3 HOP3 sing N N 145 DC P OP1 doub N N 146 DC P OP2 sing N N 147 DC P "O5'" sing N N 148 DC OP2 HOP2 sing N N 149 DC "O5'" "C5'" sing N N 150 DC "C5'" "C4'" sing N N 151 DC "C5'" "H5'" sing N N 152 DC "C5'" "H5''" sing N N 153 DC "C4'" "O4'" sing N N 154 DC "C4'" "C3'" sing N N 155 DC "C4'" "H4'" sing N N 156 DC "O4'" "C1'" sing N N 157 DC "C3'" "O3'" sing N N 158 DC "C3'" "C2'" sing N N 159 DC "C3'" "H3'" sing N N 160 DC "O3'" "HO3'" sing N N 161 DC "C2'" "C1'" sing N N 162 DC "C2'" "H2'" sing N N 163 DC "C2'" "H2''" sing N N 164 DC "C1'" N1 sing N N 165 DC "C1'" "H1'" sing N N 166 DC N1 C2 sing N N 167 DC N1 C6 sing N N 168 DC C2 O2 doub N N 169 DC C2 N3 sing N N 170 DC N3 C4 doub N N 171 DC C4 N4 sing N N 172 DC C4 C5 sing N N 173 DC N4 H41 sing N N 174 DC N4 H42 sing N N 175 DC C5 C6 doub N N 176 DC C5 H5 sing N N 177 DC C6 H6 sing N N 178 DG OP3 P sing N N 179 DG OP3 HOP3 sing N N 180 DG P OP1 doub N N 181 DG P OP2 sing N N 182 DG P "O5'" sing N N 183 DG OP2 HOP2 sing N N 184 DG "O5'" "C5'" sing N N 185 DG "C5'" "C4'" sing N N 186 DG "C5'" "H5'" sing N N 187 DG "C5'" "H5''" sing N N 188 DG "C4'" "O4'" sing N N 189 DG "C4'" "C3'" sing N N 190 DG "C4'" "H4'" sing N N 191 DG "O4'" "C1'" sing N N 192 DG "C3'" "O3'" sing N N 193 DG "C3'" "C2'" sing N N 194 DG "C3'" "H3'" sing N N 195 DG "O3'" "HO3'" sing N N 196 DG "C2'" "C1'" sing N N 197 DG "C2'" "H2'" sing N N 198 DG "C2'" "H2''" sing N N 199 DG "C1'" N9 sing N N 200 DG "C1'" "H1'" sing N N 201 DG N9 C8 sing Y N 202 DG N9 C4 sing Y N 203 DG C8 N7 doub Y N 204 DG C8 H8 sing N N 205 DG N7 C5 sing Y N 206 DG C5 C6 sing N N 207 DG C5 C4 doub Y N 208 DG C6 O6 doub N N 209 DG C6 N1 sing N N 210 DG N1 C2 sing N N 211 DG N1 H1 sing N N 212 DG C2 N2 sing N N 213 DG C2 N3 doub N N 214 DG N2 H21 sing N N 215 DG N2 H22 sing N N 216 DG N3 C4 sing N N 217 DT OP3 P sing N N 218 DT OP3 HOP3 sing N N 219 DT P OP1 doub N N 220 DT P OP2 sing N N 221 DT P "O5'" sing N N 222 DT OP2 HOP2 sing N N 223 DT "O5'" "C5'" sing N N 224 DT "C5'" "C4'" sing N N 225 DT "C5'" "H5'" sing N N 226 DT "C5'" "H5''" sing N N 227 DT "C4'" "O4'" sing N N 228 DT "C4'" "C3'" sing N N 229 DT "C4'" "H4'" sing N N 230 DT "O4'" "C1'" sing N N 231 DT "C3'" "O3'" sing N N 232 DT "C3'" "C2'" sing N N 233 DT "C3'" "H3'" sing N N 234 DT "O3'" "HO3'" sing N N 235 DT "C2'" "C1'" sing N N 236 DT "C2'" "H2'" sing N N 237 DT "C2'" "H2''" sing N N 238 DT "C1'" N1 sing N N 239 DT "C1'" "H1'" sing N N 240 DT N1 C2 sing N N 241 DT N1 C6 sing N N 242 DT C2 O2 doub N N 243 DT C2 N3 sing N N 244 DT N3 C4 sing N N 245 DT N3 H3 sing N N 246 DT C4 O4 doub N N 247 DT C4 C5 sing N N 248 DT C5 C7 sing N N 249 DT C5 C6 doub N N 250 DT C7 H71 sing N N 251 DT C7 H72 sing N N 252 DT C7 H73 sing N N 253 DT C6 H6 sing N N 254 GLN N CA sing N N 255 GLN N H sing N N 256 GLN N H2 sing N N 257 GLN CA C sing N N 258 GLN CA CB sing N N 259 GLN CA HA sing N N 260 GLN C O doub N N 261 GLN C OXT sing N N 262 GLN CB CG sing N N 263 GLN CB HB2 sing N N 264 GLN CB HB3 sing N N 265 GLN CG CD sing N N 266 GLN CG HG2 sing N N 267 GLN CG HG3 sing N N 268 GLN CD OE1 doub N N 269 GLN CD NE2 sing N N 270 GLN NE2 HE21 sing N N 271 GLN NE2 HE22 sing N N 272 GLN OXT HXT sing N N 273 GLU N CA sing N N 274 GLU N H sing N N 275 GLU N H2 sing N N 276 GLU CA C sing N N 277 GLU CA CB sing N N 278 GLU CA HA sing N N 279 GLU C O doub N N 280 GLU C OXT sing N N 281 GLU CB CG sing N N 282 GLU CB HB2 sing N N 283 GLU CB HB3 sing N N 284 GLU CG CD sing N N 285 GLU CG HG2 sing N N 286 GLU CG HG3 sing N N 287 GLU CD OE1 doub N N 288 GLU CD OE2 sing N N 289 GLU OE2 HE2 sing N N 290 GLU OXT HXT sing N N 291 GLY N CA sing N N 292 GLY N H sing N N 293 GLY N H2 sing N N 294 GLY CA C sing N N 295 GLY CA HA2 sing N N 296 GLY CA HA3 sing N N 297 GLY C O doub N N 298 GLY C OXT sing N N 299 GLY OXT HXT sing N N 300 HIS N CA sing N N 301 HIS N H sing N N 302 HIS N H2 sing N N 303 HIS CA C sing N N 304 HIS CA CB sing N N 305 HIS CA HA sing N N 306 HIS C O doub N N 307 HIS C OXT sing N N 308 HIS CB CG sing N N 309 HIS CB HB2 sing N N 310 HIS CB HB3 sing N N 311 HIS CG ND1 sing Y N 312 HIS CG CD2 doub Y N 313 HIS ND1 CE1 doub Y N 314 HIS ND1 HD1 sing N N 315 HIS CD2 NE2 sing Y N 316 HIS CD2 HD2 sing N N 317 HIS CE1 NE2 sing Y N 318 HIS CE1 HE1 sing N N 319 HIS NE2 HE2 sing N N 320 HIS OXT HXT sing N N 321 ILE N CA sing N N 322 ILE N H sing N N 323 ILE N H2 sing N N 324 ILE CA C sing N N 325 ILE CA CB sing N N 326 ILE CA HA sing N N 327 ILE C O doub N N 328 ILE C OXT sing N N 329 ILE CB CG1 sing N N 330 ILE CB CG2 sing N N 331 ILE CB HB sing N N 332 ILE CG1 CD1 sing N N 333 ILE CG1 HG12 sing N N 334 ILE CG1 HG13 sing N N 335 ILE CG2 HG21 sing N N 336 ILE CG2 HG22 sing N N 337 ILE CG2 HG23 sing N N 338 ILE CD1 HD11 sing N N 339 ILE CD1 HD12 sing N N 340 ILE CD1 HD13 sing N N 341 ILE OXT HXT sing N N 342 LEU N CA sing N N 343 LEU N H sing N N 344 LEU N H2 sing N N 345 LEU CA C sing N N 346 LEU CA CB sing N N 347 LEU CA HA sing N N 348 LEU C O doub N N 349 LEU C OXT sing N N 350 LEU CB CG sing N N 351 LEU CB HB2 sing N N 352 LEU CB HB3 sing N N 353 LEU CG CD1 sing N N 354 LEU CG CD2 sing N N 355 LEU CG HG sing N N 356 LEU CD1 HD11 sing N N 357 LEU CD1 HD12 sing N N 358 LEU CD1 HD13 sing N N 359 LEU CD2 HD21 sing N N 360 LEU CD2 HD22 sing N N 361 LEU CD2 HD23 sing N N 362 LEU OXT HXT sing N N 363 LYS N CA sing N N 364 LYS N H sing N N 365 LYS N H2 sing N N 366 LYS CA C sing N N 367 LYS CA CB sing N N 368 LYS CA HA sing N N 369 LYS C O doub N N 370 LYS C OXT sing N N 371 LYS CB CG sing N N 372 LYS CB HB2 sing N N 373 LYS CB HB3 sing N N 374 LYS CG CD sing N N 375 LYS CG HG2 sing N N 376 LYS CG HG3 sing N N 377 LYS CD CE sing N N 378 LYS CD HD2 sing N N 379 LYS CD HD3 sing N N 380 LYS CE NZ sing N N 381 LYS CE HE2 sing N N 382 LYS CE HE3 sing N N 383 LYS NZ HZ1 sing N N 384 LYS NZ HZ2 sing N N 385 LYS NZ HZ3 sing N N 386 LYS OXT HXT sing N N 387 MET N CA sing N N 388 MET N H sing N N 389 MET N H2 sing N N 390 MET CA C sing N N 391 MET CA CB sing N N 392 MET CA HA sing N N 393 MET C O doub N N 394 MET C OXT sing N N 395 MET CB CG sing N N 396 MET CB HB2 sing N N 397 MET CB HB3 sing N N 398 MET CG SD sing N N 399 MET CG HG2 sing N N 400 MET CG HG3 sing N N 401 MET SD CE sing N N 402 MET CE HE1 sing N N 403 MET CE HE2 sing N N 404 MET CE HE3 sing N N 405 MET OXT HXT sing N N 406 PHE N CA sing N N 407 PHE N H sing N N 408 PHE N H2 sing N N 409 PHE CA C sing N N 410 PHE CA CB sing N N 411 PHE CA HA sing N N 412 PHE C O doub N N 413 PHE C OXT sing N N 414 PHE CB CG sing N N 415 PHE CB HB2 sing N N 416 PHE CB HB3 sing N N 417 PHE CG CD1 doub Y N 418 PHE CG CD2 sing Y N 419 PHE CD1 CE1 sing Y N 420 PHE CD1 HD1 sing N N 421 PHE CD2 CE2 doub Y N 422 PHE CD2 HD2 sing N N 423 PHE CE1 CZ doub Y N 424 PHE CE1 HE1 sing N N 425 PHE CE2 CZ sing Y N 426 PHE CE2 HE2 sing N N 427 PHE CZ HZ sing N N 428 PHE OXT HXT sing N N 429 PRO N CA sing N N 430 PRO N CD sing N N 431 PRO N H sing N N 432 PRO CA C sing N N 433 PRO CA CB sing N N 434 PRO CA HA sing N N 435 PRO C O doub N N 436 PRO C OXT sing N N 437 PRO CB CG sing N N 438 PRO CB HB2 sing N N 439 PRO CB HB3 sing N N 440 PRO CG CD sing N N 441 PRO CG HG2 sing N N 442 PRO CG HG3 sing N N 443 PRO CD HD2 sing N N 444 PRO CD HD3 sing N N 445 PRO OXT HXT sing N N 446 SER N CA sing N N 447 SER N H sing N N 448 SER N H2 sing N N 449 SER CA C sing N N 450 SER CA CB sing N N 451 SER CA HA sing N N 452 SER C O doub N N 453 SER C OXT sing N N 454 SER CB OG sing N N 455 SER CB HB2 sing N N 456 SER CB HB3 sing N N 457 SER OG HG sing N N 458 SER OXT HXT sing N N 459 THR N CA sing N N 460 THR N H sing N N 461 THR N H2 sing N N 462 THR CA C sing N N 463 THR CA CB sing N N 464 THR CA HA sing N N 465 THR C O doub N N 466 THR C OXT sing N N 467 THR CB OG1 sing N N 468 THR CB CG2 sing N N 469 THR CB HB sing N N 470 THR OG1 HG1 sing N N 471 THR CG2 HG21 sing N N 472 THR CG2 HG22 sing N N 473 THR CG2 HG23 sing N N 474 THR OXT HXT sing N N 475 TRP N CA sing N N 476 TRP N H sing N N 477 TRP N H2 sing N N 478 TRP CA C sing N N 479 TRP CA CB sing N N 480 TRP CA HA sing N N 481 TRP C O doub N N 482 TRP C OXT sing N N 483 TRP CB CG sing N N 484 TRP CB HB2 sing N N 485 TRP CB HB3 sing N N 486 TRP CG CD1 doub Y N 487 TRP CG CD2 sing Y N 488 TRP CD1 NE1 sing Y N 489 TRP CD1 HD1 sing N N 490 TRP CD2 CE2 doub Y N 491 TRP CD2 CE3 sing Y N 492 TRP NE1 CE2 sing Y N 493 TRP NE1 HE1 sing N N 494 TRP CE2 CZ2 sing Y N 495 TRP CE3 CZ3 doub Y N 496 TRP CE3 HE3 sing N N 497 TRP CZ2 CH2 doub Y N 498 TRP CZ2 HZ2 sing N N 499 TRP CZ3 CH2 sing Y N 500 TRP CZ3 HZ3 sing N N 501 TRP CH2 HH2 sing N N 502 TRP OXT HXT sing N N 503 TYR N CA sing N N 504 TYR N H sing N N 505 TYR N H2 sing N N 506 TYR CA C sing N N 507 TYR CA CB sing N N 508 TYR CA HA sing N N 509 TYR C O doub N N 510 TYR C OXT sing N N 511 TYR CB CG sing N N 512 TYR CB HB2 sing N N 513 TYR CB HB3 sing N N 514 TYR CG CD1 doub Y N 515 TYR CG CD2 sing Y N 516 TYR CD1 CE1 sing Y N 517 TYR CD1 HD1 sing N N 518 TYR CD2 CE2 doub Y N 519 TYR CD2 HD2 sing N N 520 TYR CE1 CZ doub Y N 521 TYR CE1 HE1 sing N N 522 TYR CE2 CZ sing Y N 523 TYR CE2 HE2 sing N N 524 TYR CZ OH sing N N 525 TYR OH HH sing N N 526 TYR OXT HXT sing N N 527 VAL N CA sing N N 528 VAL N H sing N N 529 VAL N H2 sing N N 530 VAL CA C sing N N 531 VAL CA CB sing N N 532 VAL CA HA sing N N 533 VAL C O doub N N 534 VAL C OXT sing N N 535 VAL CB CG1 sing N N 536 VAL CB CG2 sing N N 537 VAL CB HB sing N N 538 VAL CG1 HG11 sing N N 539 VAL CG1 HG12 sing N N 540 VAL CG1 HG13 sing N N 541 VAL CG2 HG21 sing N N 542 VAL CG2 HG22 sing N N 543 VAL CG2 HG23 sing N N 544 VAL OXT HXT sing N N 545 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2RBA 'double helix' 2RBA 'b-form double helix' 2RBA 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 22 1_555 0.181 -0.031 -0.050 -25.370 9.330 -2.232 1 C_DC1:DG22_D C 1 ? D 22 ? 19 1 1 A DA 2 1_555 B DT 21 1_555 0.051 -0.195 0.394 0.113 -18.442 -5.666 2 C_DA2:DT21_D C 2 ? D 21 ? 20 1 1 A DG 3 1_555 B DC 20 1_555 -0.020 -0.318 1.418 16.084 -6.341 -5.781 3 C_DG3:DC20_D C 3 ? D 20 ? 19 1 1 A DC 4 1_555 B DG 19 1_555 0.007 -0.162 0.846 -1.126 -14.095 -2.869 4 C_DC4:DG19_D C 4 ? D 19 ? 19 1 1 A DT 5 1_555 B DA 18 1_555 -0.105 -0.176 0.622 -2.772 -11.373 -3.863 5 C_DT5:DA18_D C 5 ? D 18 ? 20 1 1 A DC 6 1_555 B DG 17 1_555 0.080 -0.095 -0.088 -5.119 -15.044 0.438 6 C_DC6:DG17_D C 6 ? D 17 ? 19 1 1 A DT 7 1_555 B DA 16 1_555 -0.038 -0.214 -1.103 17.433 -1.464 -6.123 7 C_DT7:DA16_D C 7 ? D 16 ? 20 1 1 A DG 8 1_555 B DC 15 1_555 -0.088 -0.032 -0.225 -19.937 -9.224 -2.870 8 C_DG8:DC15_D C 8 ? D 15 ? 19 1 1 A DT 9 1_555 B DA 14 1_555 -0.188 -0.173 0.787 -12.566 -15.480 -5.018 9 C_DT9:DA14_D C 9 ? D 14 ? 20 1 1 A DA 10 1_555 B DT 13 1_555 0.049 -0.173 0.310 -0.783 -8.639 -5.892 10 C_DA10:DT13_D C 10 ? D 13 ? 20 1 1 A DC 11 1_555 B DG 12 1_555 0.053 -0.041 0.647 0.613 -8.945 -1.186 11 C_DC11:DG12_D C 11 ? D 12 ? 19 1 1 A DT 13 1_555 B DA 10 1_555 -0.217 -0.061 0.979 -27.680 -8.397 -3.582 12 C_DT13:DA10_D C 13 ? D 10 ? 20 1 1 A DG 14 1_555 B DC 9 1_555 -0.213 -0.089 -0.236 -3.190 -9.833 -0.522 13 C_DG14:DC9_D C 14 ? D 9 ? 19 1 1 A DA 15 1_555 B DT 8 1_555 -0.019 -0.150 -0.543 -5.349 -27.407 -3.557 14 C_DA15:DT8_D C 15 ? D 8 ? 20 1 1 A DG 16 1_555 B DC 7 1_555 -0.135 -0.161 -0.898 -9.901 -13.894 2.793 15 C_DG16:DC7_D C 16 ? D 7 ? 19 1 1 A DC 17 1_555 B DG 6 1_555 0.126 -0.128 -0.822 6.504 -5.233 1.394 16 C_DC17:DG6_D C 17 ? D 6 ? 19 1 1 A DA 18 1_555 B DT 5 1_555 0.100 -0.120 -0.119 1.466 -22.514 -0.353 17 C_DA18:DT5_D C 18 ? D 5 ? 20 1 1 A DG 19 1_555 B DC 4 1_555 -0.092 -0.224 0.815 -0.940 -17.629 -5.346 18 C_DG19:DC4_D C 19 ? D 4 ? 19 1 1 A DT 20 1_555 B DA 3 1_555 0.010 -0.161 -0.216 9.167 -14.156 -1.312 19 C_DT20:DA3_D C 20 ? D 3 ? 20 1 1 A DG 21 1_555 B DC 2 1_555 -0.070 -0.054 0.006 3.691 -9.704 0.208 20 C_DG21:DC2_D C 21 ? D 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 22 1_555 A DA 2 1_555 B DT 21 1_555 -1.934 1.413 2.881 -14.739 -1.342 40.791 2.044 1.215 3.310 -1.853 20.355 43.286 1 CC_DC1DA2:DT21DG22_DD C 1 ? D 22 ? C 2 ? D 21 ? 1 A DA 2 1_555 B DT 21 1_555 A DG 3 1_555 B DC 20 1_555 0.101 -1.027 2.557 -10.146 -4.513 35.877 -1.126 -1.216 2.543 -7.119 16.005 37.502 2 CC_DA2DG3:DC20DT21_DD C 2 ? D 21 ? C 3 ? D 20 ? 1 A DG 3 1_555 B DC 20 1_555 A DC 4 1_555 B DG 19 1_555 0.878 -0.910 3.799 6.003 4.471 38.782 -1.963 -0.475 3.764 6.657 -8.938 39.471 3 CC_DG3DC4:DG19DC20_DD C 3 ? D 20 ? C 4 ? D 19 ? 1 A DC 4 1_555 B DG 19 1_555 A DT 5 1_555 B DA 18 1_555 0.124 -0.562 3.427 5.493 7.011 26.121 -2.944 1.123 3.134 14.969 -11.728 27.572 4 CC_DC4DT5:DA18DG19_DD C 4 ? D 19 ? C 5 ? D 18 ? 1 A DT 5 1_555 B DA 18 1_555 A DC 6 1_555 B DG 17 1_555 0.864 0.055 2.980 7.964 -0.681 39.619 0.151 -0.411 3.088 -0.993 -11.606 40.385 5 CC_DT5DC6:DG17DA18_DD C 5 ? D 18 ? C 6 ? D 17 ? 1 A DC 6 1_555 B DG 17 1_555 A DT 7 1_555 B DA 16 1_555 0.159 -0.068 2.697 13.270 7.204 23.015 -1.630 2.403 2.324 16.030 -29.528 27.470 6 CC_DC6DT7:DA16DG17_DD C 6 ? D 17 ? C 7 ? D 16 ? 1 A DT 7 1_555 B DA 16 1_555 A DG 8 1_555 B DC 15 1_555 0.865 -0.527 4.247 -1.052 22.966 40.194 -3.179 -1.220 3.459 30.586 1.401 46.067 7 CC_DT7DG8:DC15DA16_DD C 7 ? D 16 ? C 8 ? D 15 ? 1 A DG 8 1_555 B DC 15 1_555 A DT 9 1_555 B DA 14 1_555 0.127 -0.106 3.233 -2.663 -2.297 29.733 0.264 -0.790 3.208 -4.456 5.167 29.936 8 CC_DG8DT9:DA14DC15_DD C 8 ? D 15 ? C 9 ? D 14 ? 1 A DT 9 1_555 B DA 14 1_555 A DA 10 1_555 B DT 13 1_555 0.034 0.916 3.036 2.534 -6.738 44.447 1.748 0.163 2.872 -8.838 -3.323 44.997 9 CC_DT9DA10:DT13DA14_DD C 9 ? D 14 ? C 10 ? D 13 ? 1 A DA 10 1_555 B DT 13 1_555 A DC 11 1_555 B DG 12 1_555 0.679 -0.771 3.096 -2.399 -1.552 26.242 -1.299 -2.092 3.063 -3.405 5.265 26.394 10 CC_DA10DC11:DG12DT13_DD C 10 ? D 13 ? C 11 ? D 12 ? 1 A DT 13 1_555 B DA 10 1_555 A DG 14 1_555 B DC 9 1_555 -0.722 0.562 2.749 4.425 3.424 39.528 0.494 1.484 2.693 5.032 -6.504 39.907 11 CC_DT13DG14:DC9DA10_DD C 13 ? D 10 ? C 14 ? D 9 ? 1 A DG 14 1_555 B DC 9 1_555 A DA 15 1_555 B DT 8 1_555 -0.979 0.326 3.470 -5.362 8.742 31.556 -1.047 0.724 3.546 15.569 9.549 33.140 12 CC_DG14DA15:DT8DC9_DD C 14 ? D 9 ? C 15 ? D 8 ? 1 A DA 15 1_555 B DT 8 1_555 A DG 16 1_555 B DC 7 1_555 0.692 0.495 3.392 1.164 0.590 38.473 0.675 -0.899 3.417 0.894 -1.766 38.494 13 CC_DA15DG16:DC7DT8_DD C 15 ? D 8 ? C 16 ? D 7 ? 1 A DG 16 1_555 B DC 7 1_555 A DC 17 1_555 B DG 6 1_555 0.167 -0.311 2.726 1.924 0.715 24.369 -0.919 0.104 2.721 1.690 -4.548 24.454 14 CC_DG16DC17:DG6DC7_DD C 16 ? D 7 ? C 17 ? D 6 ? 1 A DC 17 1_555 B DG 6 1_555 A DA 18 1_555 B DT 5 1_555 -0.249 1.371 3.593 -0.896 25.809 38.829 -0.973 0.222 3.772 34.574 1.201 46.355 15 CC_DC17DA18:DT5DG6_DD C 17 ? D 6 ? C 18 ? D 5 ? 1 A DA 18 1_555 B DT 5 1_555 A DG 19 1_555 B DC 4 1_555 0.252 -0.364 3.058 -9.142 10.736 32.058 -2.084 -1.679 2.639 18.370 15.644 34.948 16 CC_DA18DG19:DC4DT5_DD C 18 ? D 5 ? C 19 ? D 4 ? 1 A DG 19 1_555 B DC 4 1_555 A DT 20 1_555 B DA 3 1_555 -0.133 -0.245 2.923 9.066 0.150 32.105 -0.449 1.573 2.782 0.265 -15.998 33.329 17 CC_DG19DT20:DA3DC4_DD C 19 ? D 4 ? C 20 ? D 3 ? 1 A DT 20 1_555 B DA 3 1_555 A DG 21 1_555 B DC 2 1_555 0.197 -0.207 3.204 -0.460 11.562 29.076 -2.511 -0.450 2.909 21.963 0.874 31.247 18 CC_DT20DG21:DC2DA3_DD C 20 ? D 3 ? C 21 ? D 2 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1WYW _pdbx_initial_refinement_model.details 'PDB ENTRY 1wyw, SUMO removed' #