HEADER TRANSFERASE 21-SEP-07 2RD6 TITLE PARP COMPLEXED WITH A861695 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY [ADP-RIBOSE] POLYMERASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PARP-1, ADPRT, NAD+, ADP-RIBOSYLTRANSFERASE 1, POLY[ADP- COMPND 5 RIBOSE] SYNTHETASE 1; COMPND 6 EC: 2.4.2.30; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PARP1, ADPRT, PPOL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-INHIBITOR COMPLEX, ADP-RIBOSYLATION, DNA DAMAGE, DNA REPAIR, KEYWDS 2 DNA-BINDING, GLYCOSYLTRANSFERASE, METAL-BINDING, NAD, NUCLEUS, KEYWDS 3 PHOSPHORYLATION, POLYMORPHISM, TRANSFERASE, ZINC, ZINC-FINGER EXPDTA X-RAY DIFFRACTION AUTHOR C.H.PARK REVDAT 4 30-AUG-23 2RD6 1 REMARK SEQADV HETSYN REVDAT 3 17-NOV-09 2RD6 1 REMARK REVDAT 2 24-FEB-09 2RD6 1 VERSN REVDAT 1 23-SEP-08 2RD6 0 JRNL AUTH C.H.PARK JRNL TITL PARP COMPLEXED WITH A861695 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNX 2002 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN,ACCELRYS REMARK 3 : SOFTWARE INC.(BADGER,BERARD,KUMAR,SZALMA, REMARK 3 : YIP,DZAKULA) REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 599224.050 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 88.7 REMARK 3 NUMBER OF REFLECTIONS : 14225 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.308 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1422 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 16039 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1050 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 124 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.029 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2752 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 169 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.39000 REMARK 3 B22 (A**2) : -3.39000 REMARK 3 B33 (A**2) : 6.78000 REMARK 3 B12 (A**2) : -1.58000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.18 REMARK 3 LOW RESOLUTION CUTOFF (A) : 6.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.27 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.810 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.520 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.460 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.160 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.200 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 53.39 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.P REMARK 3 PARAMETER FILE 2 : ACCELRYS_CNX_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ACCELRYS_CNX_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 4 : LIG.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : LIG.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RD6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000044717. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15077 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.35200 REMARK 200 FOR SHELL : 5.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2RCW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN 60 MG/ML IN 50 MM TRIS, 150 MM REMARK 280 NACL, 1.5 MM DTT, PH 7.5, 2MM A861146. WELL SOLUTION: 0.8 M NACL, REMARK 280 1.8 M AMMONIUM SULFATE. CRYSTALS ARE SOAKED IN WELL SOLUTION REMARK 280 CONTAINING 1MM A861695 FROM 0.1M DMSO STOCK. CRYOPROTECTANT: 1.2 REMARK 280 M NACL, 1.6 M AMMONIUM SULFATE, 20 % ETHYLENE GLYCOL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15500 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 163.74289 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 -0.866025 0.000000 141.80550 REMARK 350 BIOMT2 3 0.866025 -0.500000 0.000000 81.87144 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.866025 -0.500000 0.000000 163.74289 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 141.80550 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 81.87144 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 192 NE2 GLN A 192 4556 1.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 16 43.07 -107.56 REMARK 500 MET A 35 77.26 -118.12 REMARK 500 ASP A 65 -164.15 44.57 REMARK 500 SER A 66 -56.63 64.89 REMARK 500 PRO A 80 93.46 -59.35 REMARK 500 LYS A 86 -22.03 67.51 REMARK 500 LYS A 87 160.19 80.98 REMARK 500 ASP A 122 49.10 -78.51 REMARK 500 ALA A 162 -140.17 -102.09 REMARK 500 ASN A 166 71.20 -64.93 REMARK 500 CYS A 184 -14.96 -154.63 REMARK 500 GLN A 185 -50.71 -121.31 REMARK 500 LYS A 188 -39.28 -33.11 REMARK 500 GLN A 192 40.49 -85.37 REMARK 500 THR A 206 2.40 -66.26 REMARK 500 ILE A 277 -78.50 -118.28 REMARK 500 SER A 278 -17.19 68.00 REMARK 500 LEU A 280 131.00 47.02 REMARK 500 ASP A 296 109.46 -55.07 REMARK 500 SER A 302 -157.81 -131.54 REMARK 500 LEU A 303 121.78 156.96 REMARK 500 ASP A 304 -3.77 63.04 REMARK 500 ASP A 320 26.30 -68.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78P A 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2RCW RELATED DB: PDB REMARK 900 PARP COMPLEXED WITH A620223 DBREF 2RD6 A 1 350 UNP P09874 PARP1_HUMAN 662 1011 SEQADV 2RD6 ALA A 101 UNP P09874 VAL 762 CONFLICT SEQRES 1 A 350 LYS SER LYS LEU PRO LYS PRO VAL GLN ASP LEU ILE LYS SEQRES 2 A 350 MET ILE PHE ASP VAL GLU SER MET LYS LYS ALA MET VAL SEQRES 3 A 350 GLU TYR GLU ILE ASP LEU GLN LYS MET PRO LEU GLY LYS SEQRES 4 A 350 LEU SER LYS ARG GLN ILE GLN ALA ALA TYR SER ILE LEU SEQRES 5 A 350 SER GLU VAL GLN GLN ALA VAL SER GLN GLY SER SER ASP SEQRES 6 A 350 SER GLN ILE LEU ASP LEU SER ASN ARG PHE TYR THR LEU SEQRES 7 A 350 ILE PRO HIS ASP PHE GLY MET LYS LYS PRO PRO LEU LEU SEQRES 8 A 350 ASN ASN ALA ASP SER VAL GLN ALA LYS ALA GLU MET LEU SEQRES 9 A 350 ASP ASN LEU LEU ASP ILE GLU VAL ALA TYR SER LEU LEU SEQRES 10 A 350 ARG GLY GLY SER ASP ASP SER SER LYS ASP PRO ILE ASP SEQRES 11 A 350 VAL ASN TYR GLU LYS LEU LYS THR ASP ILE LYS VAL VAL SEQRES 12 A 350 ASP ARG ASP SER GLU GLU ALA GLU ILE ILE ARG LYS TYR SEQRES 13 A 350 VAL LYS ASN THR HIS ALA THR THR HIS ASN ALA TYR ASP SEQRES 14 A 350 LEU GLU VAL ILE ASP ILE PHE LYS ILE GLU ARG GLU GLY SEQRES 15 A 350 GLU CYS GLN ARG TYR LYS PRO PHE LYS GLN LEU HIS ASN SEQRES 16 A 350 ARG ARG LEU LEU TRP HIS GLY SER ARG THR THR ASN PHE SEQRES 17 A 350 ALA GLY ILE LEU SER GLN GLY LEU ARG ILE ALA PRO PRO SEQRES 18 A 350 GLU ALA PRO VAL THR GLY TYR MET PHE GLY LYS GLY ILE SEQRES 19 A 350 TYR PHE ALA ASP MET VAL SER LYS SER ALA ASN TYR CYS SEQRES 20 A 350 HIS THR SER GLN GLY ASP PRO ILE GLY LEU ILE LEU LEU SEQRES 21 A 350 GLY GLU VAL ALA LEU GLY ASN MET TYR GLU LEU LYS HIS SEQRES 22 A 350 ALA SER HIS ILE SER LYS LEU PRO LYS GLY LYS HIS SER SEQRES 23 A 350 VAL LYS GLY LEU GLY LYS THR THR PRO ASP PRO SER ALA SEQRES 24 A 350 ASN ILE SER LEU ASP GLY VAL ASP VAL PRO LEU GLY THR SEQRES 25 A 350 GLY ILE SER SER GLY VAL ASN ASP THR SER LEU LEU TYR SEQRES 26 A 350 ASN GLU TYR ILE VAL TYR ASP ILE ALA GLN VAL ASN LEU SEQRES 27 A 350 LYS TYR LEU LEU LYS LEU LYS PHE ASN PHE LYS THR HET 78P A 900 18 HETNAM 78P (2R)-2-(7-CARBAMOYL-1H-BENZIMIDAZOL-2-YL)-2- HETNAM 2 78P METHYLPYRROLIDINIUM HETSYN 78P VELIPARIB FORMUL 2 78P C13 H16 N4 O FORMUL 3 HOH *169(H2 O) HELIX 1 1 PRO A 5 PHE A 16 1 12 HELIX 2 2 ASP A 17 TYR A 28 1 12 HELIX 3 3 PRO A 36 LEU A 40 5 5 HELIX 4 4 SER A 41 GLY A 62 1 22 HELIX 5 5 SER A 66 ILE A 79 1 14 HELIX 6 6 ASN A 93 LEU A 117 1 25 HELIX 7 7 ASP A 127 LEU A 136 1 10 HELIX 8 8 SER A 147 THR A 160 1 14 HELIX 9 9 PRO A 189 LEU A 193 5 5 HELIX 10 10 ARG A 204 THR A 206 5 3 HELIX 11 11 ASN A 207 GLY A 215 1 9 HELIX 12 12 MET A 239 ASN A 245 1 7 HELIX 13 13 PRO A 297 ASN A 300 5 4 HELIX 14 14 ASP A 332 ALA A 334 5 3 SHEET 1 A 5 THR A 138 VAL A 142 0 SHEET 2 A 5 TYR A 168 ARG A 180 -1 O LYS A 177 N LYS A 141 SHEET 3 A 5 VAL A 336 PHE A 348 -1 O LYS A 339 N ILE A 178 SHEET 4 A 5 ILE A 255 ALA A 264 -1 N ILE A 258 O LEU A 342 SHEET 5 A 5 ARG A 196 SER A 203 -1 N HIS A 201 O LEU A 259 SHEET 1 B 4 ILE A 234 PHE A 236 0 SHEET 2 B 4 GLU A 327 VAL A 330 -1 O TYR A 328 N PHE A 236 SHEET 3 B 4 SER A 286 GLY A 289 -1 N GLY A 289 O GLU A 327 SHEET 4 B 4 MET A 268 LEU A 271 1 N TYR A 269 O SER A 286 SHEET 1 C 2 THR A 293 PRO A 295 0 SHEET 2 C 2 GLY A 313 SER A 315 -1 O ILE A 314 N THR A 294 SITE 1 AC1 7 HIS A 201 GLY A 202 TYR A 235 PHE A 236 SITE 2 AC1 7 SER A 243 TYR A 246 HOH A1069 CRYST1 94.537 94.537 68.502 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010578 0.006107 0.000000 0.00000 SCALE2 0.000000 0.012214 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014598 0.00000 TER 2753 THR A 350 HETATM 2754 C4 78P A 900 26.540 65.623 9.392 1.00 29.21 C HETATM 2755 C5 78P A 900 26.938 66.429 10.492 1.00 29.60 C HETATM 2756 C6 78P A 900 28.292 66.356 10.936 1.00 28.64 C HETATM 2757 C8 78P A 900 25.567 64.552 7.749 1.00 34.75 C HETATM 2758 C10 78P A 900 26.013 67.369 11.218 1.00 28.51 C HETATM 2759 C13 78P A 900 24.469 64.088 6.773 1.00 35.29 C HETATM 2760 C15 78P A 900 22.394 63.670 7.891 1.00 36.45 C HETATM 2761 C17 78P A 900 24.272 62.577 6.863 1.00 34.35 C HETATM 2762 C1 78P A 900 29.227 65.493 10.290 1.00 25.84 C HETATM 2763 C2 78P A 900 28.819 64.697 9.193 1.00 29.19 C HETATM 2764 C3 78P A 900 27.499 64.753 8.741 1.00 29.62 C HETATM 2765 N7 78P A 900 26.837 64.106 7.718 1.00 31.30 N HETATM 2766 N9 78P A 900 25.344 65.447 8.718 1.00 32.18 N HETATM 2767 N11 78P A 900 24.708 67.304 10.913 1.00 28.68 N HETATM 2768 O12 78P A 900 26.394 68.187 12.046 1.00 26.83 O HETATM 2769 N14 78P A 900 23.157 64.678 7.141 1.00 35.52 N HETATM 2770 C16 78P A 900 23.248 62.410 7.976 1.00 35.45 C HETATM 2771 C18 78P A 900 24.884 64.550 5.375 1.00 37.23 C HETATM 2772 O HOH A 901 22.117 62.880 11.728 1.00 19.10 O HETATM 2773 O HOH A 902 34.242 65.903 4.741 1.00 30.34 O HETATM 2774 O HOH A 903 38.007 52.183 4.497 1.00 32.30 O HETATM 2775 O HOH A 904 19.422 66.851 12.240 1.00 23.12 O HETATM 2776 O HOH A 905 18.766 77.556 9.113 1.00 29.59 O HETATM 2777 O HOH A 906 18.031 54.056 18.591 1.00 36.15 O HETATM 2778 O HOH A 907 32.671 84.687 19.621 1.00 17.95 O HETATM 2779 O HOH A 908 20.876 76.531 11.756 1.00 27.97 O HETATM 2780 O HOH A 909 13.487 79.721 6.645 1.00 33.04 O HETATM 2781 O HOH A 910 17.347 68.585 7.021 1.00 45.59 O HETATM 2782 O HOH A 911 38.604 53.123 19.206 1.00 39.10 O HETATM 2783 O HOH A 912 10.171 50.787 -1.982 1.00 41.17 O HETATM 2784 O HOH A 913 38.608 49.843 13.387 1.00 22.44 O HETATM 2785 O HOH A 914 18.986 63.348 20.970 1.00 32.37 O HETATM 2786 O HOH A 915 9.748 75.346 12.535 1.00 47.13 O HETATM 2787 O HOH A 916 -0.990 78.683 23.031 1.00 38.61 O HETATM 2788 O HOH A 917 40.679 59.427 18.312 1.00 40.36 O HETATM 2789 O HOH A 918 34.937 67.233 12.268 1.00 38.11 O HETATM 2790 O HOH A 919 16.577 88.404 30.846 1.00 47.06 O HETATM 2791 O HOH A 920 25.951 52.507 17.828 1.00 39.94 O HETATM 2792 O HOH A 921 18.890 81.008 32.303 1.00 37.40 O HETATM 2793 O HOH A 922 17.159 69.647 4.093 1.00 34.05 O HETATM 2794 O HOH A 923 2.188 55.726 4.116 1.00 37.23 O HETATM 2795 O HOH A 924 3.322 65.131 -11.412 1.00 52.95 O HETATM 2796 O HOH A 925 12.434 74.473 14.349 1.00 53.19 O HETATM 2797 O HOH A 926 15.084 57.122 15.726 1.00 26.14 O HETATM 2798 O HOH A 927 27.375 88.167 6.674 1.00 53.86 O HETATM 2799 O HOH A 928 -1.552 76.432 6.602 1.00 45.72 O HETATM 2800 O HOH A 929 16.928 50.863 6.016 1.00 44.65 O HETATM 2801 O HOH A 930 17.246 64.674 14.015 1.00 40.59 O HETATM 2802 O HOH A 931 10.224 76.490 -15.609 1.00 47.69 O HETATM 2803 O HOH A 932 41.085 74.325 11.891 1.00 49.84 O HETATM 2804 O HOH A 933 36.110 44.618 17.261 1.00 38.84 O HETATM 2805 O HOH A 934 38.072 66.416 11.580 1.00 27.31 O HETATM 2806 O HOH A 935 11.513 71.930 13.715 1.00 54.00 O HETATM 2807 O HOH A 936 0.805 77.911 4.371 1.00 49.21 O HETATM 2808 O HOH A 937 30.538 83.998 23.336 1.00 49.48 O HETATM 2809 O HOH A 938 40.825 47.723 15.713 1.00 44.11 O HETATM 2810 O HOH A 939 40.353 51.507 17.363 1.00 61.87 O HETATM 2811 O HOH A 940 31.188 51.314 -0.159 1.00 35.49 O HETATM 2812 O HOH A 941 19.655 86.949 22.340 1.00 63.68 O HETATM 2813 O HOH A 942 24.045 86.314 35.479 1.00 51.20 O HETATM 2814 O HOH A 943 4.364 53.519 2.007 1.00 59.75 O HETATM 2815 O HOH A 944 19.150 66.338 32.099 1.00 49.30 O HETATM 2816 O HOH A 945 0.355 59.966 -9.845 1.00 49.00 O HETATM 2817 O HOH A 946 42.197 61.213 13.752 1.00 41.42 O HETATM 2818 O HOH A 947 30.089 69.690 5.381 1.00 58.52 O HETATM 2819 O HOH A 948 22.468 67.614 29.275 1.00 41.88 O HETATM 2820 O HOH A 949 10.347 52.952 -22.022 1.00 46.32 O HETATM 2821 O HOH A 950 39.451 85.065 9.275 1.00 55.93 O HETATM 2822 O HOH A 951 7.125 90.134 33.882 1.00 63.00 O HETATM 2823 O HOH A 952 18.008 69.449 -0.689 1.00 60.13 O HETATM 2824 O HOH A 953 26.291 77.630 5.582 1.00 47.54 O HETATM 2825 O HOH A 954 28.901 87.195 32.217 1.00 47.56 O HETATM 2826 O HOH A 955 31.624 76.983 33.630 1.00 41.79 O HETATM 2827 O HOH A 956 19.429 66.789 26.511 1.00 40.76 O HETATM 2828 O HOH A 957 24.577 47.844 15.036 1.00 49.74 O HETATM 2829 O HOH A 958 9.571 51.532 1.463 1.00 40.55 O HETATM 2830 O HOH A 959 -1.458 67.990 13.301 1.00 43.47 O HETATM 2831 O HOH A 960 17.612 51.086 -19.428 1.00 57.05 O HETATM 2832 O HOH A 961 41.056 61.207 23.368 1.00 51.42 O HETATM 2833 O HOH A 962 41.425 61.698 10.438 1.00 31.99 O HETATM 2834 O HOH A 963 26.022 49.680 20.812 1.00 50.78 O HETATM 2835 O HOH A 964 -1.395 54.816 10.521 1.00 46.17 O HETATM 2836 O HOH A 965 22.201 67.106 4.415 1.00 48.77 O HETATM 2837 O HOH A 966 33.313 49.711 23.906 1.00 41.33 O HETATM 2838 O HOH A 967 17.482 54.617 -15.217 1.00 58.88 O HETATM 2839 O HOH A 968 14.448 43.847 -12.538 1.00 51.63 O HETATM 2840 O HOH A 969 14.727 81.997 7.345 1.00 63.68 O HETATM 2841 O HOH A 970 17.926 77.415 4.891 1.00 62.92 O HETATM 2842 O HOH A 971 25.631 46.758 3.458 1.00 41.47 O HETATM 2843 O HOH A 972 10.245 62.065 13.764 1.00 48.00 O HETATM 2844 O HOH A 973 40.570 80.261 32.477 1.00 47.46 O HETATM 2845 O HOH A 974 5.401 54.887 10.987 1.00 63.68 O HETATM 2846 O HOH A 975 -2.108 83.885 24.372 1.00 60.88 O HETATM 2847 O HOH A 976 19.179 62.703 3.054 1.00 43.20 O HETATM 2848 O HOH A 977 14.126 59.079 20.234 1.00 57.56 O HETATM 2849 O HOH A 978 4.490 54.058 -6.012 1.00 61.14 O HETATM 2850 O HOH A 979 14.866 94.514 25.440 1.00 45.61 O HETATM 2851 O HOH A 980 23.778 61.444 -9.479 1.00 42.59 O HETATM 2852 O HOH A 981 13.156 61.762 25.656 1.00 63.68 O HETATM 2853 O HOH A 982 38.572 49.129 10.262 1.00 49.08 O HETATM 2854 O HOH A 983 15.765 61.698 11.294 1.00 39.78 O HETATM 2855 O HOH A 984 18.755 49.991 -4.747 1.00 46.73 O HETATM 2856 O HOH A 985 15.715 76.643 -9.136 1.00 57.95 O HETATM 2857 O HOH A 986 2.976 74.113 27.039 1.00 54.62 O HETATM 2858 O HOH A 987 0.330 64.987 16.305 1.00 38.17 O HETATM 2859 O HOH A 988 18.908 50.049 -0.118 1.00 53.59 O HETATM 2860 O HOH A 989 34.853 82.618 19.516 1.00 50.91 O HETATM 2861 O HOH A 990 8.935 72.058 29.807 1.00 45.85 O HETATM 2862 O HOH A 991 19.479 68.412 36.545 1.00 45.15 O HETATM 2863 O HOH A 992 13.622 64.662 9.800 1.00 42.00 O HETATM 2864 O HOH A 993 19.766 58.316 9.894 1.00 41.94 O HETATM 2865 O HOH A 994 34.540 77.383 7.054 1.00 51.54 O HETATM 2866 O HOH A 995 17.512 52.025 1.667 1.00 52.57 O HETATM 2867 O HOH A 996 11.368 50.823 -8.378 1.00 38.83 O HETATM 2868 O HOH A 997 11.411 71.309 -22.225 1.00 43.09 O HETATM 2869 O HOH A 998 15.055 61.610 31.505 1.00 61.79 O HETATM 2870 O HOH A 999 12.230 60.110 18.206 1.00 63.68 O HETATM 2871 O HOH A1000 5.539 82.841 14.939 1.00 37.69 O HETATM 2872 O HOH A1001 43.208 74.689 9.695 1.00 63.68 O HETATM 2873 O HOH A1002 22.042 87.920 23.884 1.00 50.94 O HETATM 2874 O HOH A1003 24.674 89.366 21.321 1.00 59.21 O HETATM 2875 O HOH A1004 32.865 87.034 17.812 1.00 51.66 O HETATM 2876 O HOH A1005 16.160 81.494 9.770 1.00 52.95 O HETATM 2877 O HOH A1006 19.581 51.867 13.816 1.00 63.68 O HETATM 2878 O HOH A1007 23.942 56.540 40.035 1.00 54.90 O HETATM 2879 O HOH A1008 49.660 71.238 22.811 1.00 63.68 O HETATM 2880 O HOH A1009 46.592 64.274 5.853 1.00 39.85 O HETATM 2881 O HOH A1010 38.501 63.440 21.566 1.00 63.68 O HETATM 2882 O HOH A1011 14.870 66.397 -16.926 1.00 58.35 O HETATM 2883 O HOH A1012 21.404 51.864 7.004 1.00 45.33 O HETATM 2884 O HOH A1013 17.296 77.262 -0.533 1.00 55.63 O HETATM 2885 O HOH A1014 25.766 83.606 26.235 1.00 60.08 O HETATM 2886 O HOH A1015 22.022 66.036 -1.097 1.00 60.13 O HETATM 2887 O HOH A1016 40.976 73.716 8.004 1.00 60.69 O HETATM 2888 O HOH A1017 17.376 59.270 2.712 1.00 60.73 O HETATM 2889 O HOH A1018 12.482 74.329 32.539 1.00 48.90 O HETATM 2890 O HOH A1019 37.726 59.295 25.748 1.00 56.75 O HETATM 2891 O HOH A1020 11.262 49.330 -6.358 1.00 32.40 O HETATM 2892 O HOH A1021 -8.380 79.364 28.501 1.00 63.68 O HETATM 2893 O HOH A1022 23.816 48.886 -10.049 1.00 63.29 O HETATM 2894 O HOH A1023 -3.600 85.351 31.165 1.00 62.69 O HETATM 2895 O HOH A1024 39.006 47.666 19.457 1.00 43.93 O HETATM 2896 O HOH A1025 -3.804 68.726 22.913 1.00 62.72 O HETATM 2897 O HOH A1026 4.686 63.678 -17.014 1.00 56.95 O HETATM 2898 O HOH A1027 26.653 84.382 1.268 1.00 41.79 O HETATM 2899 O HOH A1028 39.736 63.817 17.565 1.00 52.99 O HETATM 2900 O HOH A1029 13.367 73.809 -12.742 1.00 63.68 O HETATM 2901 O HOH A1030 16.486 55.224 33.514 1.00 63.68 O HETATM 2902 O HOH A1031 25.876 91.129 15.806 1.00 52.15 O HETATM 2903 O HOH A1032 28.964 90.586 19.900 1.00 56.31 O HETATM 2904 O HOH A1033 7.392 48.352 -13.802 1.00 57.90 O HETATM 2905 O HOH A1034 13.258 59.011 23.524 1.00 62.43 O HETATM 2906 O HOH A1035 2.382 67.309 27.348 1.00 63.68 O HETATM 2907 O HOH A1036 25.605 57.492 -0.205 1.00 39.33 O HETATM 2908 O HOH A1037 29.313 41.888 13.160 1.00 41.68 O HETATM 2909 O HOH A1038 20.033 63.072 13.740 1.00 44.15 O HETATM 2910 O HOH A1039 34.784 58.289 28.133 1.00 45.50 O HETATM 2911 O HOH A1040 44.739 71.768 4.914 1.00 60.86 O HETATM 2912 O HOH A1041 26.668 92.865 11.550 1.00 63.68 O HETATM 2913 O HOH A1042 9.689 88.440 35.030 1.00 54.21 O HETATM 2914 O HOH A1043 -7.073 83.556 33.580 1.00 58.97 O HETATM 2915 O HOH A1044 37.836 91.530 -0.024 1.00 60.09 O HETATM 2916 O HOH A1045 26.435 86.258 31.021 1.00 56.17 O HETATM 2917 O HOH A1046 20.294 54.174 -14.714 1.00 49.81 O HETATM 2918 O HOH A1047 -6.462 87.791 27.418 1.00 57.00 O HETATM 2919 O HOH A1048 0.063 78.846 7.846 1.00 63.68 O HETATM 2920 O HOH A1049 18.712 84.048 21.316 1.00 63.38 O HETATM 2921 O HOH A1050 10.607 50.713 -16.724 1.00 56.85 O HETATM 2922 O HOH A1051 5.655 67.950 23.732 1.00 53.03 O HETATM 2923 O HOH A1052 4.114 64.960 15.979 1.00 63.68 O HETATM 2924 O HOH A1053 17.668 88.490 19.156 1.00 61.17 O HETATM 2925 O HOH A1054 9.839 90.468 28.539 1.00 53.96 O HETATM 2926 O HOH A1055 16.226 56.018 -23.860 1.00 57.82 O HETATM 2927 O HOH A1056 31.132 84.168 1.235 1.00 48.78 O HETATM 2928 O HOH A1057 42.348 55.783 16.624 1.00 53.09 O HETATM 2929 O HOH A1058 20.220 70.820 8.159 1.00 63.68 O HETATM 2930 O HOH A1059 31.935 46.823 7.543 1.00 52.23 O HETATM 2931 O HOH A1060 39.079 83.682 28.461 1.00 59.01 O HETATM 2932 O HOH A1061 21.533 71.466 0.874 1.00 58.53 O HETATM 2933 O HOH A1062 16.008 68.893 -15.102 1.00 54.76 O HETATM 2934 O HOH A1063 41.645 79.720 13.704 1.00 59.52 O HETATM 2935 O HOH A1064 28.434 46.003 18.560 1.00 47.09 O HETATM 2936 O HOH A1065 -5.379 79.173 -1.331 1.00 56.19 O HETATM 2937 O HOH A1066 37.162 67.854 34.881 1.00 63.68 O HETATM 2938 O HOH A1067 19.200 65.635 6.000 1.00 25.00 O HETATM 2939 O HOH A1068 21.477 67.595 8.859 1.00 25.00 O HETATM 2940 O HOH A1069 28.094 62.223 5.924 1.00 25.00 O CONECT 2754 2755 2764 2766 CONECT 2755 2754 2756 2758 CONECT 2756 2755 2762 CONECT 2757 2759 2765 2766 CONECT 2758 2755 2767 2768 CONECT 2759 2757 2761 2769 2771 CONECT 2760 2769 2770 CONECT 2761 2759 2770 CONECT 2762 2756 2763 CONECT 2763 2762 2764 CONECT 2764 2754 2763 2765 CONECT 2765 2757 2764 CONECT 2766 2754 2757 CONECT 2767 2758 CONECT 2768 2758 CONECT 2769 2759 2760 CONECT 2770 2760 2761 CONECT 2771 2759 MASTER 324 0 1 14 11 0 2 6 2939 1 18 27 END