HEADER LIPID BINDING PROTEIN 21-SEP-07 2RDC TITLE CRYSTAL STRUCTURE OF A PUTATIVE LIPID BINDING PROTEIN (GSU0061) FROM TITLE 2 GEOBACTER SULFURREDUCENS PCA AT 1.80 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS PCA; SOURCE 3 ORGANISM_TAXID: 243231; SOURCE 4 STRAIN: PCA, DSM 12127; SOURCE 5 ATCC: 51573; SOURCE 6 GENE: NP_951123.1, GSU0061; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 25-JAN-23 2RDC 1 REMARK SEQADV REVDAT 5 24-JUL-19 2RDC 1 REMARK LINK REVDAT 4 25-OCT-17 2RDC 1 REMARK REVDAT 3 28-JUL-10 2RDC 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2RDC 1 VERSN REVDAT 1 09-OCT-07 2RDC 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION JRNL TITL 2 (NP_951123.1) FROM GEOBACTER SULFURREDUCENS AT 1.80 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0040 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.05 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 26140 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1328 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1790 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2104 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 126 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.65 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.31000 REMARK 3 B22 (A**2) : -2.02000 REMARK 3 B33 (A**2) : 2.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.136 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.102 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.358 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2230 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1552 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3019 ; 1.405 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3738 ; 0.979 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 287 ; 5.210 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;30.852 ;22.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 400 ;14.587 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;14.704 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 331 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2515 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 499 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 523 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1573 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1103 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1152 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 125 ; 0.157 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.171 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 55 ; 0.301 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.180 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1504 ; 2.648 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 563 ; 0.592 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2166 ; 3.600 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 941 ; 5.932 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 842 ; 8.144 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 20 A 152 6 REMARK 3 1 B 20 B 152 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 1633 ; 1.380 ; 5.000 REMARK 3 LOOSE THERMAL 1 B (A**2): 1633 ; 3.880 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 3. SO4, CL AND MPD FROM THE CRYSTALLIZATION SOLUTION REMARK 3 ARE MODELED. ASSIGNMENT OF MPD IS TENTATIVE SINCE REMARK 3 IT IS IN CLOSE CONTACT WITH PROTEIN. THE RESIDUE REMARK 3 TYR 53 NEARBY IS HIGHLY CONSERVED. REMARK 3 4. RESIDUES A0-19, B0-17 ARE DISORDERED AND NOT MODELED. REMARK 3 THE REGIONS 125-132 FOR BOTH CHAINS A AND B ARE POOR. REMARK 4 REMARK 4 2RDC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000044723. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.07 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000, 0.9797, 0.9796 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26165 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 29.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.64400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 28.6% 2-METHYL-2,4 REMARK 280 -PENTANEDIOL, 0.2M LITHIUM SULFATE, 0.1M MES PH 6.07, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.65500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.65500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 24.59500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.12500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 24.59500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.12500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.65500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 24.59500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 58.12500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.65500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 24.59500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 58.12500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION REMARK 300 ON BURIED SURFACE AREA. REMARK 300 SIZE EXCLUSION CHROMATOGRAPHY AND PACKING ANALYSIS REMARK 300 SUPPORT THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT REMARK 300 OLIGOMERIZATION STATE IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3410 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 GLN A 2 REMARK 465 GLN A 3 REMARK 465 PRO A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 VAL A 8 REMARK 465 VAL A 9 REMARK 465 SER A 10 REMARK 465 TYR A 11 REMARK 465 VAL A 12 REMARK 465 ALA A 13 REMARK 465 GLU A 14 REMARK 465 TYR A 15 REMARK 465 HIS A 16 REMARK 465 LYS A 17 REMARK 465 ALA A 18 REMARK 465 THR A 19 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 GLN B 2 REMARK 465 GLN B 3 REMARK 465 PRO B 4 REMARK 465 THR B 5 REMARK 465 ALA B 6 REMARK 465 SER B 7 REMARK 465 VAL B 8 REMARK 465 VAL B 9 REMARK 465 SER B 10 REMARK 465 TYR B 11 REMARK 465 VAL B 12 REMARK 465 ALA B 13 REMARK 465 GLU B 14 REMARK 465 TYR B 15 REMARK 465 HIS B 16 REMARK 465 LYS B 17 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 20 CG CD OE1 OE2 REMARK 470 LYS A 27 CD CE NZ REMARK 470 GLU A 31 CD OE1 OE2 REMARK 470 GLU A 37 CD OE1 OE2 REMARK 470 LYS A 56 CD CE NZ REMARK 470 ARG A 68 CZ NH1 NH2 REMARK 470 GLU A 74 CD OE1 OE2 REMARK 470 GLU A 78 CD OE1 OE2 REMARK 470 LYS A 114 CG CD CE NZ REMARK 470 GLU A 115 CD OE1 OE2 REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 ASN A 129 CG OD1 ND2 REMARK 470 ARG A 130 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 28 CD CE NZ REMARK 470 GLU B 111 CD OE1 OE2 REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 PRO B 126 CB CG CD REMARK 470 GLU B 127 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 19 -6.13 -55.88 REMARK 500 ARG B 70 -6.91 -149.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 155 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 154 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 372393 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 2RDC A 1 152 UNP Q74H32 Q74H32_GEOSL 1 152 DBREF 2RDC B 1 152 UNP Q74H32 Q74H32_GEOSL 1 152 SEQADV 2RDC GLY A 0 UNP Q74H32 EXPRESSION TAG SEQADV 2RDC GLY B 0 UNP Q74H32 EXPRESSION TAG SEQRES 1 A 153 GLY MSE GLN GLN PRO THR ALA SER VAL VAL SER TYR VAL SEQRES 2 A 153 ALA GLU TYR HIS LYS ALA THR GLU THR THR MSE GLY ARG SEQRES 3 A 153 TYR LYS LYS VAL ILE GLU ILE THR GLY HIS ASP GLU VAL SEQRES 4 A 153 ALA ALA LYS LEU LEU GLU GLY LEU ILE ASP ALA GLY THR SEQRES 5 A 153 ARG TYR PHE SER LYS VAL VAL GLU MSE GLU HIS ARG MSE SEQRES 6 A 153 ALA SER ALA ARG PHE ARG LEU ASP GLY GLU GLU LEU ARG SEQRES 7 A 153 GLU LEU THR GLU THR LEU ASP ARG SER ARG ARG LEU ALA SEQRES 8 A 153 HIS GLU SER LEU ILE SER SER LEU HIS VAL PHE ASN ARG SEQRES 9 A 153 TYR ILE VAL LYS GLU TYR GLY GLU GLU LEU LYS GLU ALA SEQRES 10 A 153 GLY ILE GLU GLY GLY ILE PHE PRO LYS PRO GLU ALA ASN SEQRES 11 A 153 ARG ASP ARG ILE ALA ILE ALA ASP TRP ALA GLY GLU LEU SEQRES 12 A 153 LEU THR GLY ILE TYR GLU ASN ARG HIS ARG SEQRES 1 B 153 GLY MSE GLN GLN PRO THR ALA SER VAL VAL SER TYR VAL SEQRES 2 B 153 ALA GLU TYR HIS LYS ALA THR GLU THR THR MSE GLY ARG SEQRES 3 B 153 TYR LYS LYS VAL ILE GLU ILE THR GLY HIS ASP GLU VAL SEQRES 4 B 153 ALA ALA LYS LEU LEU GLU GLY LEU ILE ASP ALA GLY THR SEQRES 5 B 153 ARG TYR PHE SER LYS VAL VAL GLU MSE GLU HIS ARG MSE SEQRES 6 B 153 ALA SER ALA ARG PHE ARG LEU ASP GLY GLU GLU LEU ARG SEQRES 7 B 153 GLU LEU THR GLU THR LEU ASP ARG SER ARG ARG LEU ALA SEQRES 8 B 153 HIS GLU SER LEU ILE SER SER LEU HIS VAL PHE ASN ARG SEQRES 9 B 153 TYR ILE VAL LYS GLU TYR GLY GLU GLU LEU LYS GLU ALA SEQRES 10 B 153 GLY ILE GLU GLY GLY ILE PHE PRO LYS PRO GLU ALA ASN SEQRES 11 B 153 ARG ASP ARG ILE ALA ILE ALA ASP TRP ALA GLY GLU LEU SEQRES 12 B 153 LEU THR GLY ILE TYR GLU ASN ARG HIS ARG MODRES 2RDC MSE A 23 MET SELENOMETHIONINE MODRES 2RDC MSE A 60 MET SELENOMETHIONINE MODRES 2RDC MSE A 64 MET SELENOMETHIONINE MODRES 2RDC MSE B 23 MET SELENOMETHIONINE MODRES 2RDC MSE B 60 MET SELENOMETHIONINE MODRES 2RDC MSE B 64 MET SELENOMETHIONINE HET MSE A 23 13 HET MSE A 60 8 HET MSE A 64 8 HET MSE B 23 13 HET MSE B 60 8 HET MSE B 64 8 HET CL A 153 1 HET MPD A 154 8 HET SO4 B 153 5 HET SO4 B 154 5 HET CL B 155 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM SO4 SULFATE ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 CL 2(CL 1-) FORMUL 4 MPD C6 H14 O2 FORMUL 5 SO4 2(O4 S 2-) FORMUL 8 HOH *126(H2 O) HELIX 1 1 THR A 21 GLY A 34 1 14 HELIX 2 2 ASP A 36 ARG A 68 1 33 HELIX 3 3 ASP A 72 ALA A 116 1 45 HELIX 4 4 ALA A 134 ASN A 149 1 16 HELIX 5 5 THR B 21 GLY B 34 1 14 HELIX 6 6 ASP B 36 ALA B 67 1 32 HELIX 7 7 ARG B 68 ARG B 70 5 3 HELIX 8 8 ASP B 72 ALA B 116 1 45 HELIX 9 9 ASP B 131 ASN B 149 1 19 LINK C THR A 22 N MSE A 23 1555 1555 1.33 LINK C MSE A 23 N GLY A 24 1555 1555 1.33 LINK C GLU A 59 N MSE A 60 1555 1555 1.33 LINK C MSE A 60 N GLU A 61 1555 1555 1.32 LINK C ARG A 63 N MSE A 64 1555 1555 1.32 LINK C MSE A 64 N ALA A 65 1555 1555 1.32 LINK C THR B 22 N MSE B 23 1555 1555 1.33 LINK C MSE B 23 N GLY B 24 1555 1555 1.33 LINK C GLU B 59 N MSE B 60 1555 1555 1.33 LINK C MSE B 60 N GLU B 61 1555 1555 1.32 LINK C ARG B 63 N MSE B 64 1555 1555 1.32 LINK C MSE B 64 N ALA B 65 1555 1555 1.33 SITE 1 AC1 5 HIS B 99 ARG B 103 ARG B 130 HOH B 183 SITE 2 AC1 5 HOH B 229 SITE 1 AC2 5 TYR B 53 ARG B 87 ARG B 88 HIS B 91 SITE 2 AC2 5 ARG B 132 SITE 1 AC3 2 ARG B 25 GLU B 119 SITE 1 AC4 3 ARG A 25 GLY A 120 LYS A 125 SITE 1 AC5 9 TYR A 53 ARG A 87 HIS A 91 ALA A 134 SITE 2 AC5 9 ALA A 136 HOH A 162 HOH A 200 ARG B 150 SITE 3 AC5 9 ARG B 152 CRYST1 49.190 116.250 97.310 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020329 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008602 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010276 0.00000