HEADER HYDROLASE/HYDROLASE INHIBITOR 24-SEP-07 2RDL TITLE HAMSTER CHYMASE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHYMASE 2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: METHOXYSUCCINYL-ALA-ALA-PRO-ALA-CHLOROMETHYLKETONE COMPND 7 INHIBITOR; COMPND 8 CHAIN: I, J; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MESOCRICETUS AURATUS; SOURCE 3 ORGANISM_COMMON: GOLDEN HAMSTER; SOURCE 4 ORGANISM_TAXID: 10036; SOURCE 5 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10469; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES KEYWDS CHYMASE 2, SERINE PROTEASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.SPURLINO,M.ABAD,J.KERVINEN REVDAT 5 13-JUL-11 2RDL 1 VERSN REVDAT 4 24-FEB-09 2RDL 1 VERSN REVDAT 3 05-FEB-08 2RDL 1 JRNL REVDAT 2 06-NOV-07 2RDL 1 AUTHOR REVDAT 1 30-OCT-07 2RDL 0 JRNL AUTH J.KERVINEN,M.ABAD,C.CRYSLER,M.KOLPAK,A.D.MAHAN,J.A.MASUCCI, JRNL AUTH 2 S.BAYOUMY,M.D.CUMMINGS,X.YAO,M.OLSON,L.DE GARAVILLA,L.KUO, JRNL AUTH 3 I.DECKMAN,J.SPURLINO JRNL TITL STRUCTURAL BASIS FOR ELASTOLYTIC SUBSTRATE SPECIFICITY IN JRNL TITL 2 RODENT ALPHA-CHYMASES. JRNL REF J.BIOL.CHEM. V. 283 427 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 17981788 JRNL DOI 10.1074/JBC.M707157200 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18529 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.3700 - 8.1460 0.95 598 0 0.2350 0.0000 REMARK 3 2 8.1460 - 6.4790 0.95 538 0 0.2230 0.0000 REMARK 3 3 6.4790 - 5.6630 0.96 542 0 0.2010 0.0000 REMARK 3 4 5.6630 - 5.1470 0.96 521 0 0.1680 0.0000 REMARK 3 5 5.1470 - 4.7790 0.96 530 0 0.1670 0.0000 REMARK 3 6 4.7790 - 4.4980 0.95 512 0 0.1470 0.0000 REMARK 3 7 4.4980 - 4.2730 0.95 516 0 0.1480 0.0000 REMARK 3 8 4.2730 - 4.0880 0.95 506 0 0.1470 0.0000 REMARK 3 9 4.0880 - 3.9310 0.96 511 0 0.1620 0.0000 REMARK 3 10 3.9310 - 3.7950 0.95 502 0 0.1520 0.0000 REMARK 3 11 3.7950 - 3.6770 0.96 510 0 0.1570 0.0000 REMARK 3 12 3.6770 - 3.5720 0.94 481 0 0.1690 0.0000 REMARK 3 13 3.5720 - 3.4770 0.94 497 0 0.1580 0.0000 REMARK 3 14 3.4770 - 3.3930 0.96 498 0 0.1710 0.0000 REMARK 3 15 3.3930 - 3.3160 0.96 519 0 0.1850 0.0000 REMARK 3 16 3.3160 - 3.2450 0.93 476 0 0.1770 0.0000 REMARK 3 17 3.2450 - 3.1800 0.97 519 0 0.1940 0.0000 REMARK 3 18 3.1800 - 3.1200 0.95 492 0 0.1920 0.0000 REMARK 3 19 3.1200 - 3.0650 0.95 486 0 0.2090 0.0000 REMARK 3 20 3.0650 - 3.0130 0.94 498 0 0.2030 0.0000 REMARK 3 21 3.0130 - 2.9640 0.95 487 0 0.1910 0.0000 REMARK 3 22 2.9640 - 2.9190 0.94 507 0 0.1980 0.0000 REMARK 3 23 2.9190 - 2.8760 0.94 479 0 0.2190 0.0000 REMARK 3 24 2.8760 - 2.8350 0.95 495 0 0.2190 0.0000 REMARK 3 25 2.8350 - 2.7970 0.95 485 0 0.2160 0.0000 REMARK 3 26 2.7970 - 2.7610 0.94 497 0 0.1950 0.0000 REMARK 3 27 2.7610 - 2.7260 0.94 481 0 0.2110 0.0000 REMARK 3 28 2.7260 - 2.6930 0.95 505 0 0.2020 0.0000 REMARK 3 29 2.6930 - 2.6620 0.97 476 0 0.1970 0.0000 REMARK 3 30 2.6620 - 2.6320 0.93 486 0 0.2020 0.0000 REMARK 3 31 2.6320 - 2.6030 0.94 493 0 0.2060 0.0000 REMARK 3 32 2.6030 - 2.5760 0.95 473 0 0.1770 0.0000 REMARK 3 33 2.5760 - 2.5500 0.94 486 0 0.1890 0.0000 REMARK 3 34 2.5500 - 2.5240 0.94 485 0 0.1830 0.0000 REMARK 3 35 2.5240 - 2.5000 0.94 494 0 0.1960 0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 34.57 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11900 REMARK 3 B22 (A**2) : 0.11900 REMARK 3 B33 (A**2) : -0.23900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 NULL REMARK 3 ANGLE : 0.708 NULL REMARK 3 CHIRALITY : 0.051 NULL REMARK 3 PLANARITY : 0.003 NULL REMARK 3 DIHEDRAL : 12.406 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RDL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-OCT-07. REMARK 100 THE RCSB ID CODE IS RCSB044732. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18529 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: N/A REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.1 M TRIS-HCL, PH 8.5, REMARK 280 AND 0.2 M AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.28750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.63600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.63600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 148.93125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.63600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.63600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.64375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.63600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.63600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 148.93125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.63600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.63600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 49.64375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 99.28750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3670 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: J, B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -71.27200 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1420 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1380 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: J, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE UNBOUND FORM OF THE INHIBITOR (CHAINS I,J) IS METHOXYSUCCINYL- REMARK 400 ALA-ALA-PRO-ALA-CHLOROMETHYLKETONE. UPON REACTION WITH PROTEIN IT REMARK 400 FORMS TWO COVALENT BONDS: 1) A COVALENT BOND TO SER 195 FORMING A REMARK 400 HEMIKETAL ALV AND 2) A COVALENT BOND TO NE2 OF HIS 57 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB ARG B 218 OT1 MSU J 1 1.74 REMARK 500 CG ARG B 218 OT1 MSU J 1 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 28 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 ALA J 2 N - CA - C ANGL. DEV. = -21.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 28 -2.20 -56.45 REMARK 500 ASN A 37 30.59 74.42 REMARK 500 THR A 54 -167.64 -162.45 REMARK 500 SER A 129 174.50 -56.37 REMARK 500 PRO B 28 -0.69 -53.24 REMARK 500 ARG B 49 -32.59 -39.93 REMARK 500 HIS B 57 1.55 -69.39 REMARK 500 PHE B 89 69.11 -116.38 REMARK 500 LYS B 126 78.91 -44.02 REMARK 500 SER B 127 -63.23 153.47 REMARK 500 ASN B 128 -12.03 -42.40 REMARK 500 SER B 129 132.34 -34.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ALA J 2 48.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN I OF METHOXYSUCCINYL-ALA- REMARK 800 ALA-PRO-ALA CHLOROMETHYL KETONE INHIBITOR REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN J OF METHOXYSUCCINYL-ALA- REMARK 800 ALA-PRO-ALA CHLOROMETHYL KETONE INHIBITOR DBREF 2RDL A 16 245 UNP O70164 O70164_MESAU 22 247 DBREF 2RDL B 16 245 UNP O70164 O70164_MESAU 22 247 DBREF 2RDL I 1 6 PDB 2RDL 2RDL 1 6 DBREF 2RDL J 1 6 PDB 2RDL 2RDL 1 6 SEQRES 1 A 226 ILE ILE GLY GLY THR GLU CYS ARG PRO HIS ALA ARG PRO SEQRES 2 A 226 TYR MET ALA TYR LEU GLU ILE VAL THR PRO GLU ASN HIS SEQRES 3 A 226 LEU SER ALA CYS SER GLY PHE LEU ILE ARG ARG ASN PHE SEQRES 4 A 226 VAL MET THR ALA ALA HIS CYS ALA GLY ARG SER ILE THR SEQRES 5 A 226 VAL LEU LEU GLY ALA HIS ASN LYS LYS VAL LYS GLU ASP SEQRES 6 A 226 THR TRP GLN LYS LEU GLU VAL GLU LYS GLN PHE PRO HIS SEQRES 7 A 226 PRO LYS TYR ASP ASP ARG LEU VAL LEU ASN ASP ILE MET SEQRES 8 A 226 LEU LEU LYS LEU LYS GLU LYS ALA ASN LEU THR LEU GLY SEQRES 9 A 226 VAL GLY THR LEU PRO ILE SER ALA LYS SER ASN SER ILE SEQRES 10 A 226 PRO PRO GLY ARG VAL CYS ARG ALA VAL GLY TRP GLY ARG SEQRES 11 A 226 THR ASN VAL ASN GLU PRO PRO SER ASP THR LEU GLN GLU SEQRES 12 A 226 VAL LYS MET ARG ILE LEU ASP PRO GLN ALA CYS LYS HIS SEQRES 13 A 226 PHE GLU ASP PHE HIS GLN GLU PRO GLN LEU CYS VAL GLY SEQRES 14 A 226 ASN PRO LYS LYS ILE ARG ASN VAL TYR LYS GLY ASP SER SEQRES 15 A 226 GLY GLY PRO LEU LEU CYS ALA GLY ILE ALA GLN GLY ILE SEQRES 16 A 226 ALA SER TYR VAL LEU ARG ASN ALA LYS PRO PRO SER VAL SEQRES 17 A 226 PHE THR ARG ILE SER HIS TYR ARG PRO TRP ILE ASN LYS SEQRES 18 A 226 ILE LEU ARG GLU ASN SEQRES 1 B 226 ILE ILE GLY GLY THR GLU CYS ARG PRO HIS ALA ARG PRO SEQRES 2 B 226 TYR MET ALA TYR LEU GLU ILE VAL THR PRO GLU ASN HIS SEQRES 3 B 226 LEU SER ALA CYS SER GLY PHE LEU ILE ARG ARG ASN PHE SEQRES 4 B 226 VAL MET THR ALA ALA HIS CYS ALA GLY ARG SER ILE THR SEQRES 5 B 226 VAL LEU LEU GLY ALA HIS ASN LYS LYS VAL LYS GLU ASP SEQRES 6 B 226 THR TRP GLN LYS LEU GLU VAL GLU LYS GLN PHE PRO HIS SEQRES 7 B 226 PRO LYS TYR ASP ASP ARG LEU VAL LEU ASN ASP ILE MET SEQRES 8 B 226 LEU LEU LYS LEU LYS GLU LYS ALA ASN LEU THR LEU GLY SEQRES 9 B 226 VAL GLY THR LEU PRO ILE SER ALA LYS SER ASN SER ILE SEQRES 10 B 226 PRO PRO GLY ARG VAL CYS ARG ALA VAL GLY TRP GLY ARG SEQRES 11 B 226 THR ASN VAL ASN GLU PRO PRO SER ASP THR LEU GLN GLU SEQRES 12 B 226 VAL LYS MET ARG ILE LEU ASP PRO GLN ALA CYS LYS HIS SEQRES 13 B 226 PHE GLU ASP PHE HIS GLN GLU PRO GLN LEU CYS VAL GLY SEQRES 14 B 226 ASN PRO LYS LYS ILE ARG ASN VAL TYR LYS GLY ASP SER SEQRES 15 B 226 GLY GLY PRO LEU LEU CYS ALA GLY ILE ALA GLN GLY ILE SEQRES 16 B 226 ALA SER TYR VAL LEU ARG ASN ALA LYS PRO PRO SER VAL SEQRES 17 B 226 PHE THR ARG ILE SER HIS TYR ARG PRO TRP ILE ASN LYS SEQRES 18 B 226 ILE LEU ARG GLU ASN SEQRES 1 I 6 MSU ALA ALA PRO ALV 0QE SEQRES 1 J 6 MSU ALA ALA PRO ALV 0QE MODRES 2RDL ALV I 5 ALA (2S)-2-AMINOPROPANE-1,1-DIOL MODRES 2RDL ALV J 5 ALA (2S)-2-AMINOPROPANE-1,1-DIOL HET MSU I 1 8 HET ALV I 5 5 HET 0QE I 6 1 HET MSU J 1 8 HET ALV J 5 5 HET 0QE J 6 1 HET SO4 A 246 5 HET SO4 A 247 5 HET SO4 B 246 5 HET SO4 B 247 5 HETNAM MSU SUCCINIC ACID MONOMETHYL ESTER HETNAM ALV (2S)-2-AMINOPROPANE-1,1-DIOL HETNAM 0QE CHLOROMETHANE HETNAM SO4 SULFATE ION HETSYN 0QE CHLORO METHYL GROUP FORMUL 3 MSU 2(C5 H8 O4) FORMUL 3 ALV 2(C3 H9 N O2) FORMUL 3 0QE 2(C H3 CL) FORMUL 5 SO4 4(O4 S 2-) FORMUL 9 HOH *127(H2 O) HELIX 1 1 ALA A 55 ALA A 59 5 5 HELIX 2 2 ASP A 164 LYS A 169 5 6 HELIX 3 3 TYR A 234 ASN A 245 1 12 HELIX 4 4 ALA B 55 ALA B 59 5 5 HELIX 5 5 ASP B 164 LYS B 169 5 6 HELIX 6 6 TYR B 234 GLU B 244 1 11 SHEET 1 A 6 THR A 20 GLU A 21 0 SHEET 2 A 6 GLN A 156 LEU A 163 -1 O GLU A 157 N THR A 20 SHEET 3 A 6 VAL A 135 GLY A 140 -1 N CYS A 136 O MET A 160 SHEET 4 A 6 PRO A 198 CYS A 201 -1 O LEU A 200 N ARG A 137 SHEET 5 A 6 ILE A 208 VAL A 216 -1 O GLN A 210 N LEU A 199 SHEET 6 A 6 ALA I 3 PRO I 4 -1 O ALA I 3 N VAL A 216 SHEET 1 B 6 THR A 20 GLU A 21 0 SHEET 2 B 6 GLN A 156 LEU A 163 -1 O GLU A 157 N THR A 20 SHEET 3 B 6 GLN A 180 VAL A 183 -1 O CYS A 182 N LEU A 163 SHEET 4 B 6 SER A 226 ARG A 230 -1 O SER A 226 N VAL A 183 SHEET 5 B 6 ILE A 208 VAL A 216 -1 N ILE A 212 O THR A 229 SHEET 6 B 6 ALA I 3 PRO I 4 -1 O ALA I 3 N VAL A 216 SHEET 1 C 7 MET A 30 VAL A 34B 0 SHEET 2 C 7 LEU A 39 ARG A 48 -1 O GLY A 44 N ALA A 31 SHEET 3 C 7 PHE A 51 THR A 54 -1 O MET A 53 N PHE A 45 SHEET 4 C 7 MET A 104 LEU A 108 -1 O LEU A 106 N VAL A 52 SHEET 5 C 7 GLN A 81 PRO A 90 -1 N LYS A 87 O LYS A 107 SHEET 6 C 7 SER A 63 LEU A 68 -1 N VAL A 66 O LEU A 83 SHEET 7 C 7 MET A 30 VAL A 34B-1 N TYR A 32 O LEU A 67 SHEET 1 D 6 ALA J 3 PRO J 4 0 SHEET 2 D 6 ILE B 208 VAL B 216 -1 O VAL B 216 N ALA J 3 SHEET 3 D 6 PRO B 198 CYS B 201 -1 N LEU B 199 O GLN B 210 SHEET 4 D 6 VAL B 135 GLY B 140 -1 N ARG B 137 O LEU B 200 SHEET 5 D 6 GLN B 156 ARG B 161 -1 O MET B 160 N CYS B 136 SHEET 6 D 6 THR B 20 GLU B 21 -1 N THR B 20 O GLU B 157 SHEET 1 E 4 ALA J 3 PRO J 4 0 SHEET 2 E 4 ILE B 208 VAL B 216 -1 O VAL B 216 N ALA J 3 SHEET 3 E 4 SER B 226 ARG B 230 -1 O VAL B 227 N TYR B 215 SHEET 4 E 4 GLN B 180 VAL B 183 -1 N LEU B 181 O PHE B 228 SHEET 1 F 7 MET B 30 VAL B 34B 0 SHEET 2 F 7 LEU B 39 ARG B 48 -1 O SER B 40 N ILE B 34A SHEET 3 F 7 PHE B 51 THR B 54 -1 O PHE B 51 N ARG B 48 SHEET 4 F 7 MET B 104 LEU B 108 -1 O MET B 104 N THR B 54 SHEET 5 F 7 GLN B 81 PRO B 90 -1 N PHE B 89 O LEU B 105 SHEET 6 F 7 SER B 63 LEU B 68 -1 N VAL B 66 O LEU B 83 SHEET 7 F 7 MET B 30 VAL B 34B-1 N TYR B 32 O LEU B 67 SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.04 SSBOND 2 CYS A 136 CYS A 201 1555 1555 2.04 SSBOND 3 CYS A 168 CYS A 182 1555 1555 2.04 SSBOND 4 CYS B 42 CYS B 58 1555 1555 2.04 SSBOND 5 CYS B 136 CYS B 201 1555 1555 2.04 SSBOND 6 CYS B 168 CYS B 182 1555 1555 2.04 LINK NE2 HIS A 57 C1 0QE I 6 1555 1555 1.52 LINK C1 0QE J 6 NE2 HIS B 57 1555 1555 1.52 LINK C1 MSU I 1 N ALA I 2 1555 1555 1.39 LINK C1 MSU J 1 N ALA J 2 1555 1555 1.41 LINK C PRO I 4 N ALV I 5 1555 1555 1.37 LINK C ALV I 5 C1 0QE I 6 1555 1555 1.56 LINK C PRO J 4 N ALV J 5 1555 1555 1.38 LINK C ALV J 5 C1 0QE J 6 1555 1555 1.55 LINK OG SER B 195 C ALV J 5 1555 1555 1.31 LINK OG SER A 195 C ALV I 5 1555 1555 1.33 CISPEP 1 PRO A 225 PRO A 225A 0 0.30 CISPEP 2 PRO B 225 PRO B 225A 0 0.39 SITE 1 AC1 6 ARG A 161 ASN A 185 LYS A 186 ARG A 188 SITE 2 AC1 6 HOH A 265 LYS B 93 SITE 1 AC2 7 ARG A 27 ARG A 137 LEU A 200 ALA A 204 SITE 2 AC2 7 GLY A 205 HOH A 258 ARG B 49 SITE 1 AC3 6 LYS A 87 ARG B 161 ASN B 185 LYS B 186 SITE 2 AC3 6 ARG B 188 HOH B 249 SITE 1 AC4 6 ARG B 27 ARG B 137 LEU B 200 ALA B 204 SITE 2 AC4 6 GLY B 205 HOH B 269 SITE 1 AC5 15 HIS A 57 TYR A 191 GLY A 193 SER A 195 SITE 2 AC5 15 SER A 214 TYR A 215 VAL A 216 LEU A 217 SITE 3 AC5 15 ARG A 218 ASN A 219 HOH A 284 PRO B 185A SITE 4 AC5 15 LYS B 186 ILE B 187 HOH I 7 SITE 1 AC6 11 HOH A 279 HIS B 57 TYR B 191 GLY B 193 SITE 2 AC6 11 SER B 195 SER B 214 TYR B 215 VAL B 216 SITE 3 AC6 11 ARG B 218 ASN B 219 HOH J 7 CRYST1 71.272 71.272 198.575 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014031 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014031 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005036 0.00000