HEADER PROTEIN BINDING 01-OCT-07 2RFM TITLE STRUCTURE OF A THERMOPHILIC ANKYRIN REPEAT PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ANKYRIN REPEAT PROTEIN TV1425; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOPLASMA VOLCANIUM; SOURCE 3 ORGANISM_TAXID: 50339; SOURCE 4 GENE: TVG1472127; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28C KEYWDS ANKYRIN REPEAT, ANK REPEAT, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.LOEW,U.WEININGER,P.NEUMANN,M.T.STUBBS,J.BALBACH REVDAT 4 13-MAR-24 2RFM 1 REMARK SEQADV REVDAT 3 13-JUL-11 2RFM 1 VERSN REVDAT 2 24-FEB-09 2RFM 1 VERSN REVDAT 1 11-MAR-08 2RFM 0 JRNL AUTH C.LOEW,U.WEININGER,P.NEUMANN,M.KLEPSCH,H.LILIE,M.T.STUBBS, JRNL AUTH 2 J.BALBACH JRNL TITL STRUCTURAL INSIGHTS INTO AN EQUILIBRIUM FOLDING INTERMEDIATE JRNL TITL 2 OF AN ARCHAEAL ANKYRIN REPEAT PROTEIN JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 3779 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 18305166 JRNL DOI 10.1073/PNAS.0710657105 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 58909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3022 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2737 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.1560 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.2070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2909 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 111 REMARK 3 SOLVENT ATOMS : 479 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.24000 REMARK 3 B22 (A**2) : -0.24000 REMARK 3 B33 (A**2) : 0.35000 REMARK 3 B12 (A**2) : -0.12000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.081 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.079 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.043 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.349 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3285 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4438 ; 1.373 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 419 ; 4.592 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 146 ;35.345 ;24.932 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 619 ;12.034 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;17.591 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 488 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2416 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1863 ; 0.245 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2351 ; 0.322 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 712 ; 0.204 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 63 ; 0.289 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 59 ; 0.238 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2045 ; 1.170 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3223 ; 1.754 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1381 ; 1.605 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1215 ; 2.342 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): 38.2760 42.7480 15.7370 REMARK 3 T TENSOR REMARK 3 T11: -0.3559 T22: -0.2802 REMARK 3 T33: -0.3795 T12: 0.0205 REMARK 3 T13: 0.0041 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.9405 L22: 0.9245 REMARK 3 L33: 0.6847 L12: 0.0322 REMARK 3 L13: -0.3163 L23: -0.0281 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: -0.0108 S13: 0.0567 REMARK 3 S21: 0.0073 S22: 0.0009 S23: -0.0084 REMARK 3 S31: -0.0071 S32: 0.0176 S33: -0.0036 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 189 REMARK 3 ORIGIN FOR THE GROUP (A): 63.0600 34.2240 13.4680 REMARK 3 T TENSOR REMARK 3 T11: -0.3407 T22: -0.2096 REMARK 3 T33: -0.3458 T12: 0.0140 REMARK 3 T13: 0.0171 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.5234 L22: 0.9276 REMARK 3 L33: 0.5035 L12: 0.0736 REMARK 3 L13: -0.0329 L23: -0.0376 REMARK 3 S TENSOR REMARK 3 S11: -0.0187 S12: -0.1193 S13: -0.2172 REMARK 3 S21: 0.0614 S22: -0.0238 S23: -0.0849 REMARK 3 S31: 0.0803 S32: 0.0808 S33: 0.0425 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TLS REFINEMENT - 1 GROUP FOR EVERY REMARK 3 MOLECULE. REMARK 4 REMARK 4 2RFM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000044799. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-06; 12-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 180; 180 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N REMARK 200 RADIATION SOURCE : BESSY; ROTATING ANODE REMARK 200 BEAMLINE : 14.2; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9238; 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE; GRAPHITE REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD; RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58965 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 48.472 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : 0.05500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.32300 REMARK 200 R SYM FOR SHELL (I) : 0.35300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% GLYCEROL, 2M AMMONIUMSULFATE, 1% REMARK 280 1,3-BUTANEDIOLE, 20MM HEPES, PH 7.4, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.16100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.32200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 58.16100 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 116.32200 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.16100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 116.32200 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 58.16100 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 116.32200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -208.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 101.00200 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 -1.000000 0.000000 0.000000 101.00200 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 426 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 415 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 LYS A 3 REMARK 465 ASN A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 LYS B 3 REMARK 465 ASN B 4 REMARK 465 GLY B 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 123 O HOH A 451 1.69 REMARK 500 O4 144 A 194 O HOH A 406 1.94 REMARK 500 OD1 ASN A 123 O HOH A 439 1.99 REMARK 500 O2 GOL B 201 O HOH B 234 2.00 REMARK 500 ND2 ASN A 46 O HOH A 437 2.13 REMARK 500 OE1 GLU A 53 O1 BU2 A 196 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 248 O HOH A 385 10665 1.88 REMARK 500 C2 BU2 A 196 O HOH A 394 4665 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 56 -125.68 47.53 REMARK 500 ASP A 56 -113.82 57.91 REMARK 500 ASP A 161 -161.54 -101.74 REMARK 500 ARG A 188 -71.26 -59.61 REMARK 500 ASP B 56 -123.58 56.05 REMARK 500 ASP B 161 -165.78 -100.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 192 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 193 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 144 A 194 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BU2 B 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BU2 B 198 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BU2 A 195 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BU2 A 196 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 199 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 197 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 198 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 199 DBREF 2RFM A 1 189 UNP Q978J0 Y1425_THEVO 1 189 DBREF 2RFM B 1 189 UNP Q978J0 Y1425_THEVO 1 189 SEQADV 2RFM GLY A -2 UNP Q978J0 EXPRESSION TAG SEQADV 2RFM SER A -1 UNP Q978J0 EXPRESSION TAG SEQADV 2RFM HIS A 0 UNP Q978J0 EXPRESSION TAG SEQADV 2RFM GLY B -2 UNP Q978J0 EXPRESSION TAG SEQADV 2RFM SER B -1 UNP Q978J0 EXPRESSION TAG SEQADV 2RFM HIS B 0 UNP Q978J0 EXPRESSION TAG SEQRES 1 A 192 GLY SER HIS MET ASP LYS ASN GLY GLU ILE VAL GLU LYS SEQRES 2 A 192 ILE LYS ASP GLU LYS SER ILE ASN GLN ASN LEU ASP PHE SEQRES 3 A 192 LEU ARG ASN TYR ARG ASP SER TYR ASN ARG THR PRO LEU SEQRES 4 A 192 MET VAL ALA CYS MET LEU GLY MET GLU ASN ALA ILE ASP SEQRES 5 A 192 LYS LEU VAL GLU ASN PHE ASP LYS LEU GLU ASP LYS ASP SEQRES 6 A 192 ILE GLU GLY SER THR ALA LEU ILE TRP ALA VAL LYS ASN SEQRES 7 A 192 ASN ARG LEU GLY ILE ALA GLU LYS LEU LEU SER LYS GLY SEQRES 8 A 192 SER ASN VAL ASN THR LYS ASP PHE SER GLY LYS THR PRO SEQRES 9 A 192 LEU MET TRP SER ILE ILE PHE GLY TYR SER GLU MET SER SEQRES 10 A 192 TYR PHE LEU LEU GLU HIS GLY ALA ASN VAL ASN ASP ARG SEQRES 11 A 192 ASN LEU GLU GLY GLU THR PRO LEU ILE VAL ALA SER LYS SEQRES 12 A 192 TYR GLY ARG SER GLU ILE VAL LYS LYS LEU LEU GLU LEU SEQRES 13 A 192 GLY ALA ASP ILE SER ALA ARG ASP LEU THR GLY LEU THR SEQRES 14 A 192 ALA GLU ALA SER ALA ARG ILE PHE GLY ARG GLN GLU VAL SEQRES 15 A 192 ILE LYS ILE PHE THR GLU VAL ARG ARG ALA SEQRES 1 B 192 GLY SER HIS MET ASP LYS ASN GLY GLU ILE VAL GLU LYS SEQRES 2 B 192 ILE LYS ASP GLU LYS SER ILE ASN GLN ASN LEU ASP PHE SEQRES 3 B 192 LEU ARG ASN TYR ARG ASP SER TYR ASN ARG THR PRO LEU SEQRES 4 B 192 MET VAL ALA CYS MET LEU GLY MET GLU ASN ALA ILE ASP SEQRES 5 B 192 LYS LEU VAL GLU ASN PHE ASP LYS LEU GLU ASP LYS ASP SEQRES 6 B 192 ILE GLU GLY SER THR ALA LEU ILE TRP ALA VAL LYS ASN SEQRES 7 B 192 ASN ARG LEU GLY ILE ALA GLU LYS LEU LEU SER LYS GLY SEQRES 8 B 192 SER ASN VAL ASN THR LYS ASP PHE SER GLY LYS THR PRO SEQRES 9 B 192 LEU MET TRP SER ILE ILE PHE GLY TYR SER GLU MET SER SEQRES 10 B 192 TYR PHE LEU LEU GLU HIS GLY ALA ASN VAL ASN ASP ARG SEQRES 11 B 192 ASN LEU GLU GLY GLU THR PRO LEU ILE VAL ALA SER LYS SEQRES 12 B 192 TYR GLY ARG SER GLU ILE VAL LYS LYS LEU LEU GLU LEU SEQRES 13 B 192 GLY ALA ASP ILE SER ALA ARG ASP LEU THR GLY LEU THR SEQRES 14 B 192 ALA GLU ALA SER ALA ARG ILE PHE GLY ARG GLN GLU VAL SEQRES 15 B 192 ILE LYS ILE PHE THR GLU VAL ARG ARG ALA HET SO4 A 190 5 HET SO4 A 191 5 HET SO4 A 192 5 HET SO4 A 193 5 HET 144 A 194 8 HET BU2 A 195 6 HET BU2 A 196 6 HET GOL A 197 6 HET GOL A 198 6 HET GOL A 199 12 HET SO4 B 190 5 HET SO4 B 191 5 HET SO4 B 192 5 HET SO4 B 193 5 HET CL B 194 1 HET CL B 195 1 HET CL B 196 1 HET BU2 B 197 12 HET BU2 B 198 6 HET GOL B 199 6 HET GOL B 200 6 HET GOL B 201 12 HETNAM SO4 SULFATE ION HETNAM 144 TRIS-HYDROXYMETHYL-METHYL-AMMONIUM HETNAM BU2 1,3-BUTANEDIOL HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 8(O4 S 2-) FORMUL 7 144 C4 H12 N O3 1+ FORMUL 8 BU2 4(C4 H10 O2) FORMUL 10 GOL 6(C3 H8 O3) FORMUL 17 CL 3(CL 1-) FORMUL 25 HOH *479(H2 O) HELIX 1 1 ILE A 7 LYS A 12 5 6 HELIX 2 2 ASP A 13 ASN A 20 1 8 HELIX 3 3 ASN A 20 ASN A 26 1 7 HELIX 4 4 THR A 34 GLY A 43 1 10 HELIX 5 5 MET A 44 ASN A 46 5 3 HELIX 6 6 ALA A 47 ASP A 56 1 10 HELIX 7 7 THR A 67 ASN A 75 1 9 HELIX 8 8 ARG A 77 GLY A 88 1 12 HELIX 9 9 THR A 100 GLY A 109 1 10 HELIX 10 10 TYR A 110 HIS A 120 1 11 HELIX 11 11 THR A 133 GLY A 142 1 10 HELIX 12 12 ARG A 143 LEU A 153 1 11 HELIX 13 13 THR A 166 PHE A 174 1 9 HELIX 14 14 ARG A 176 ALA A 189 1 14 HELIX 15 15 ASP B 13 ASN B 20 1 8 HELIX 16 16 ASN B 20 TYR B 27 1 8 HELIX 17 17 THR B 34 GLY B 43 1 10 HELIX 18 18 MET B 44 ASN B 46 5 3 HELIX 19 19 ALA B 47 ASP B 56 1 10 HELIX 20 20 THR B 67 ASN B 75 1 9 HELIX 21 21 ARG B 77 LYS B 87 1 11 HELIX 22 22 THR B 100 GLY B 109 1 10 HELIX 23 23 TYR B 110 GLU B 119 1 10 HELIX 24 24 THR B 133 GLY B 142 1 10 HELIX 25 25 ARG B 143 LEU B 153 1 11 HELIX 26 26 THR B 166 GLY B 175 1 10 HELIX 27 27 ARG B 176 ALA B 189 1 14 SITE 1 AC1 11 ASN A 76 ARG A 77 LEU A 78 GLY A 79 SITE 2 AC1 11 HOH A 232 HOH A 233 HOH A 275 HOH A 330 SITE 3 AC1 11 HOH A 354 HOH A 399 HOH A 400 SITE 1 AC2 7 ASN B 76 ARG B 77 LEU B 78 GLY B 79 SITE 2 AC2 7 HOH B 220 HOH B 308 HOH B 339 SITE 1 AC3 10 LYS A 181 ASN B 76 GLY B 109 SER B 111 SITE 2 AC3 10 GLU B 112 HOH B 211 HOH B 241 HOH B 349 SITE 3 AC3 10 HOH B 377 HOH B 421 SITE 1 AC4 6 LYS A 61 HOH A 286 HOH A 349 HOH A 430 SITE 2 AC4 6 ARG B 127 HOH B 281 SITE 1 AC5 5 GLY A 175 GLN A 177 GLU A 178 HOH A 393 SITE 2 AC5 5 HOH A 402 SITE 1 AC6 4 ARG A 127 SER A 158 ALA A 159 ARG A 160 SITE 1 AC7 3 ASN B 123 ASN B 125 HOH B 414 SITE 1 AC8 3 LYS B 61 THR B 93 LYS B 94 SITE 1 AC9 2 ASN B 123 HOH B 322 SITE 1 BC1 10 SER A 111 GLY A 142 ARG A 143 SER A 144 SITE 2 BC1 10 GLU A 145 ILE A 146 HOH A 215 HOH A 229 SITE 3 BC1 10 HOH A 315 HOH A 406 SITE 1 BC2 6 GLY B 142 GLY B 175 ARG B 176 GLN B 177 SITE 2 BC2 6 GLU B 178 HOH B 248 SITE 1 BC3 9 ARG B 25 ASN B 26 TYR B 27 ARG B 28 SITE 2 BC3 9 THR B 34 PRO B 35 LYS B 57 HOH B 328 SITE 3 BC3 9 HOH B 331 SITE 1 BC4 7 LYS A 74 ASN A 75 TYR A 110 HOH A 236 SITE 2 BC4 7 HOH A 438 ARG B 176 HOH B 352 SITE 1 BC5 6 GLU A 53 ASN A 54 GLY A 154 HOH A 308 SITE 2 BC5 6 HOH A 388 HOH A 394 SITE 1 BC6 5 ARG B 28 ASN B 32 ASP B 60 LYS B 61 SITE 2 BC6 5 HOH B 337 SITE 1 BC7 9 SER B 111 TYR B 115 GLY B 142 ARG B 143 SITE 2 BC7 9 SER B 144 GLU B 145 ILE B 146 HOH B 264 SITE 3 BC7 9 HOH B 394 SITE 1 BC8 8 ARG A 33 MET A 41 HOH A 282 HOH A 304 SITE 2 BC8 8 HOH A 418 HOH A 432 ARG B 172 ILE B 173 SITE 1 BC9 10 HOH A 216 LYS B 140 TYR B 141 PHE B 174 SITE 2 BC9 10 ARG B 176 HOH B 234 HOH B 254 HOH B 306 SITE 3 BC9 10 HOH B 323 HOH B 352 SITE 1 CC1 9 LYS A 140 TYR A 141 PHE A 174 HOH A 284 SITE 2 CC1 9 HOH A 319 HOH A 332 HOH A 366 HOH A 395 SITE 3 CC1 9 HOH B 292 SITE 1 CC2 12 LYS A 99 TRP A 104 ILE A 107 TYR A 141 SITE 2 CC2 12 HOH A 283 HOH A 296 HOH A 301 HOH A 341 SITE 3 CC2 12 HOH A 405 HOH A 408 ILE B 107 HOH B 202 CRYST1 101.002 101.002 174.483 90.00 90.00 120.00 P 64 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009906 0.005719 0.000000 0.00000 SCALE2 0.000000 0.011439 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005752 0.00000