HEADER HYDROLASE 02-OCT-07 2RG2 TITLE CRYSTAL STRUCTURE OF VARIANT R18L OF CONJUGATED BILE ACID HYDROLASE TITLE 2 FROM CLOSTRIDIUM PERFRINGENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHOLOYLGLYCINE HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CONJUGATED BILE ACID HYDROLASE, CBAH, BILE SALT HYDROLASE; COMPND 5 EC: 3.5.1.24; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; SOURCE 3 ORGANISM_TAXID: 1502; SOURCE 4 GENE: CBH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PKLH101 KEYWDS NTN-HYDROLASE, HYDROLASE, AMIDASE, BILE SALT HYDROLASE, CONJUGATED KEYWDS 2 BILE ACID HYDROLASE, BSH, CBAH, CHOLOYLGLYCINE HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.ROSSMANN,W.SAENGER REVDAT 5 03-APR-24 2RG2 1 REMARK REVDAT 4 20-OCT-21 2RG2 1 REMARK SEQADV LINK REVDAT 3 25-OCT-17 2RG2 1 REMARK REVDAT 2 13-JUL-11 2RG2 1 VERSN REVDAT 1 17-FEB-09 2RG2 0 JRNL AUTH M.ROSSMANN,W.SAENGER JRNL TITL STRUCTURAL ANALYSIS OF VARIANTS OF CONJUGATED BILE ACID JRNL TITL 2 HYDROLASE FROM CLOSTRIDIUM PERFRINGENS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 34005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1703 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2314 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1870 REMARK 3 BIN FREE R VALUE SET COUNT : 129 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2606 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 393 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.41000 REMARK 3 B22 (A**2) : 0.41000 REMARK 3 B33 (A**2) : -0.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.127 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.118 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2725 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3687 ; 1.207 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 335 ; 5.908 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;35.119 ;25.909 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 469 ;12.580 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ; 8.484 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 410 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2058 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1282 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1900 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 332 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 116 ; 0.233 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 55 ; 0.189 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1702 ; 0.834 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2687 ; 1.339 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1159 ; 1.805 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1000 ; 2.747 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2RG2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000044815. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR 345 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35363 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 11.30 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.2 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : 0.24300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2BJFA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 8.5, 200 MM LITHIUM REMARK 280 SULFATE, 25% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z+1/2 REMARK 290 4555 Y,-X,Z+1/2 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z+1/2 REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.01150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 85.01150 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 85.01150 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 85.01150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 26790 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -64.24400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 64.24400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -64.24400 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 64.24400 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 85.01150 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 85.01150 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 561 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 606 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 85 -55.75 73.32 REMARK 500 THR A 174 -115.08 -125.24 REMARK 500 ASN A 175 -155.37 -128.86 REMARK 500 PRO A 177 -166.94 -72.13 REMARK 500 ASP A 243 28.23 -143.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 330 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 333 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 334 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 336 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 337 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BJF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CONJUGATED BILE ACID HYDROLASE FROM REMARK 900 CLOSTRIDIUM PERFRINGENS IN COMPLEX WITH REACTION PRODUCTS TAURINE REMARK 900 AND DEOXYCHOLATE REMARK 900 RELATED ID: 2BJG RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CONJUGATED BILE ACID HYDROLASE FROM REMARK 900 CLOSTRIDIUM PERFRINGENS IN COMPLEX WITH REACTION PRODUCTS TAURINE REMARK 900 AND DEOXYCHOLATE DBREF 2RG2 A 2 329 UNP P54965 CBH_CLOPE 2 329 SEQADV 2RG2 LEU A 18 UNP P54965 ARG 18 ENGINEERED MUTATION SEQRES 1 A 328 CSO THR GLY LEU ALA LEU GLU THR LYS ASP GLY LEU HIS SEQRES 2 A 328 LEU PHE GLY LEU ASN MET ASP ILE GLU TYR SER PHE ASN SEQRES 3 A 328 GLN SER ILE ILE PHE ILE PRO ARG ASN PHE LYS CYS VAL SEQRES 4 A 328 ASN LYS SER ASN LYS LYS GLU LEU THR THR LYS TYR ALA SEQRES 5 A 328 VAL LEU GLY MET GLY THR ILE PHE ASP ASP TYR PRO THR SEQRES 6 A 328 PHE ALA ASP GLY MET ASN GLU LYS GLY LEU GLY CYS ALA SEQRES 7 A 328 GLY LEU ASN PHE PRO VAL TYR VAL SER TYR SER LYS GLU SEQRES 8 A 328 ASP ILE GLU GLY LYS THR ASN ILE PRO VAL TYR ASN PHE SEQRES 9 A 328 LEU LEU TRP VAL LEU ALA ASN PHE SER SER VAL GLU GLU SEQRES 10 A 328 VAL LYS GLU ALA LEU LYS ASN ALA ASN ILE VAL ASP ILE SEQRES 11 A 328 PRO ILE SER GLU ASN ILE PRO ASN THR THR LEU HIS TRP SEQRES 12 A 328 MET ILE SER ASP ILE THR GLY LYS SER ILE VAL VAL GLU SEQRES 13 A 328 GLN THR LYS GLU LYS LEU ASN VAL PHE ASP ASN ASN ILE SEQRES 14 A 328 GLY VAL LEU THR ASN SER PRO THR PHE ASP TRP HIS VAL SEQRES 15 A 328 ALA ASN LEU ASN GLN TYR VAL GLY LEU ARG TYR ASN GLN SEQRES 16 A 328 VAL PRO GLU PHE LYS LEU GLY ASP GLN SER LEU THR ALA SEQRES 17 A 328 LEU GLY GLN GLY THR GLY LEU VAL GLY LEU PRO GLY ASP SEQRES 18 A 328 PHE THR PRO ALA SER ARG PHE ILE ARG VAL ALA PHE LEU SEQRES 19 A 328 ARG ASP ALA MET ILE LYS ASN ASP LYS ASP SER ILE ASP SEQRES 20 A 328 LEU ILE GLU PHE PHE HIS ILE LEU ASN ASN VAL ALA MET SEQRES 21 A 328 VAL ARG GLY SER THR ARG THR VAL GLU GLU LYS SER ASP SEQRES 22 A 328 LEU THR GLN TYR THR SER CYS MET CYS LEU GLU LYS GLY SEQRES 23 A 328 ILE TYR TYR TYR ASN THR TYR GLU ASN ASN GLN ILE ASN SEQRES 24 A 328 ALA ILE ASP MET ASN LYS GLU ASN LEU ASP GLY ASN GLU SEQRES 25 A 328 ILE LYS THR TYR LYS TYR ASN LYS THR LEU SER ILE ASN SEQRES 26 A 328 HIS VAL ASN MODRES 2RG2 CSO A 2 CYS S-HYDROXYCYSTEINE HET CSO A 2 7 HET SO4 A 330 5 HET EDO A 331 4 HET EDO A 332 4 HET EDO A 333 4 HET EDO A 334 4 HET EDO A 335 4 HET GOL A 336 6 HET GOL A 337 6 HETNAM CSO S-HYDROXYCYSTEINE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSO C3 H7 N O3 S FORMUL 2 SO4 O4 S 2- FORMUL 3 EDO 5(C2 H6 O2) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 10 HOH *393(H2 O) HELIX 1 1 ASN A 104 PHE A 113 1 10 HELIX 2 2 SER A 115 LYS A 124 1 10 HELIX 3 3 THR A 178 ASN A 187 1 10 HELIX 4 4 GLN A 188 VAL A 190 5 3 HELIX 5 5 GLY A 213 VAL A 217 5 5 HELIX 6 6 THR A 224 LYS A 244 1 21 HELIX 7 7 ASP A 245 ILE A 247 5 3 HELIX 8 8 ASP A 248 ASN A 258 1 11 HELIX 9 9 ASN A 305 GLU A 307 5 3 SHEET 1 A 6 VAL A 172 LEU A 173 0 SHEET 2 A 6 THR A 3 GLU A 8 -1 N GLY A 4 O LEU A 173 SHEET 3 A 6 HIS A 14 ILE A 22 -1 O LEU A 15 N LEU A 7 SHEET 4 A 6 LEU A 275 CYS A 283 -1 O MET A 282 N PHE A 16 SHEET 5 A 6 ILE A 288 THR A 293 -1 O TYR A 290 N CYS A 281 SHEET 6 A 6 ASN A 300 ASP A 303 -1 O ILE A 302 N TYR A 289 SHEET 1 B 8 LEU A 163 ASP A 167 0 SHEET 2 B 8 SER A 153 GLN A 158 -1 N GLU A 157 O ASN A 164 SHEET 3 B 8 LEU A 142 SER A 147 -1 N TRP A 144 O VAL A 156 SHEET 4 B 8 GLY A 77 ASN A 82 -1 N GLY A 77 O SER A 147 SHEET 5 B 8 TYR A 64 ASN A 72 -1 N ALA A 68 O GLY A 80 SHEET 6 B 8 VAL A 54 PHE A 61 -1 N MET A 57 O ALA A 68 SHEET 7 B 8 SER A 29 ILE A 33 -1 N ILE A 31 O GLY A 56 SHEET 8 B 8 LYS A 315 LYS A 318 -1 O LYS A 315 N PHE A 32 SHEET 1 C 2 LYS A 38 ASN A 41 0 SHEET 2 C 2 LYS A 46 THR A 49 -1 O LEU A 48 N CYS A 39 SHEET 1 D 2 THR A 98 PRO A 101 0 SHEET 2 D 2 ALA A 126 VAL A 129 1 O ASN A 127 N THR A 98 SHEET 1 E 2 GLU A 199 LEU A 202 0 SHEET 2 E 2 GLN A 205 THR A 208 -1 O LEU A 207 N PHE A 200 LINK C CSO A 2 N THR A 3 1555 1555 1.32 CISPEP 1 SER A 176 PRO A 177 0 0.53 SITE 1 AC1 6 ASP A 243 ARG A 263 ARG A 267 LYS A 272 SITE 2 AC1 6 SER A 273 HOH A 651 SITE 1 AC2 7 ALA A 6 GLY A 151 SER A 153 ASN A 168 SITE 2 AC2 7 GLY A 171 HOH A 515 HOH A 684 SITE 1 AC3 7 TYR A 317 LYS A 318 HOH A 424 HOH A 429 SITE 2 AC3 7 HOH A 441 HOH A 561 HOH A 723 SITE 1 AC4 5 MET A 20 ALA A 68 GLY A 80 EDO A 334 SITE 2 AC4 5 HOH A 419 SITE 1 AC5 6 PHE A 26 THR A 59 THR A 66 PHE A 67 SITE 2 AC5 6 ALA A 68 EDO A 333 SITE 1 AC6 4 ASN A 27 SER A 29 THR A 59 ILE A 60 SITE 1 AC7 10 CSO A 2 ASN A 82 PRO A 84 ASN A 175 SITE 2 AC7 10 LEU A 210 GLY A 211 GLN A 212 HOH A 383 SITE 3 AC7 10 HOH A 447 HOH A 499 SITE 1 AC8 4 ARG A 193 TYR A 194 ASN A 195 HOH A 710 CRYST1 64.244 64.244 170.023 90.00 90.00 90.00 P 42 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015566 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015566 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005882 0.00000 HETATM 1 N CSO A 2 -18.608 27.605 26.257 1.00 14.87 N HETATM 2 CA CSO A 2 -19.253 26.812 25.182 1.00 15.36 C HETATM 3 CB CSO A 2 -18.198 25.993 24.434 1.00 16.44 C HETATM 4 SG CSO A 2 -16.646 26.838 24.545 1.00 23.54 S HETATM 5 C CSO A 2 -20.262 25.877 25.780 1.00 13.55 C HETATM 6 O CSO A 2 -20.183 25.509 26.970 1.00 13.00 O HETATM 7 OD CSO A 2 -16.730 27.935 25.889 1.00 29.84 O