data_2RHD # _entry.id 2RHD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RHD pdb_00002rhd 10.2210/pdb2rhd/pdb RCSB RCSB044861 ? ? WWPDB D_1000044861 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2RHD _pdbx_database_status.recvd_initial_deposition_date 2007-10-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dong, A.' 1 'Xu, X.' 2 'Lew, J.' 3 'Lin, Y.H.' 4 'Khuu, C.' 5 'Sun, X.' 6 'Qiu, W.' 7 'Kozieradzki, I.' 8 'Arrowsmith, C.H.' 9 'Edwards, A.M.' 10 'Weigelt, J.' 11 'Sundstrom, M.' 12 'Bochkarev, A.' 13 'Hui, R.' 14 'Sukumar, D.' 15 'Structural Genomics Consortium (SGC)' 16 # _citation.id primary _citation.title 'Crystal structure of Cryptosporidium parvum small GTPase RAB1A.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dong, A.' 1 ? primary 'Xu, X.' 2 ? primary 'Lew, J.' 3 ? primary 'Lin, Y.H.' 4 ? primary 'Khuu, C.' 5 ? primary 'Sun, X.' 6 ? primary 'Qiu, W.' 7 ? primary 'Kozieradzki, I.' 8 ? primary 'Arrowsmith, C.H.' 9 ? primary 'Edwards, A.M.' 10 ? primary 'Weigelt, J.' 11 ? primary 'Sundstrom, M.' 12 ? primary 'Bochkarev, A.' 13 ? primary 'Hui, R.' 14 ? primary 'Sukumar, D.' 15 ? # _cell.entry_id 2RHD _cell.length_a 107.385 _cell.length_b 107.385 _cell.length_c 45.226 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2RHD _symmetry.space_group_name_H-M 'P 3 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Small GTP binding protein rab1a' 19990.604 1 ? ? 'Residues 1-174' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 4 water nat water 18.015 182 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQERFRTITSSYYR GAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVE QAFHTMAGEIKKRVQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQERFRTITSSYYR GAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVE QAFHTMAGEIKKRVQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MET n 1 3 ASN n 1 4 PRO n 1 5 GLU n 1 6 TYR n 1 7 ASP n 1 8 TYR n 1 9 LEU n 1 10 PHE n 1 11 LYS n 1 12 LEU n 1 13 LEU n 1 14 LEU n 1 15 ILE n 1 16 GLY n 1 17 ASP n 1 18 SER n 1 19 GLY n 1 20 VAL n 1 21 GLY n 1 22 LYS n 1 23 SER n 1 24 CYS n 1 25 LEU n 1 26 LEU n 1 27 LEU n 1 28 ARG n 1 29 PHE n 1 30 ALA n 1 31 ASP n 1 32 ASP n 1 33 THR n 1 34 TYR n 1 35 THR n 1 36 ASP n 1 37 SER n 1 38 TYR n 1 39 ILE n 1 40 SER n 1 41 THR n 1 42 ILE n 1 43 GLY n 1 44 VAL n 1 45 ASP n 1 46 PHE n 1 47 LYS n 1 48 ILE n 1 49 ARG n 1 50 THR n 1 51 ILE n 1 52 SER n 1 53 LEU n 1 54 GLU n 1 55 ASN n 1 56 LYS n 1 57 THR n 1 58 VAL n 1 59 LYS n 1 60 LEU n 1 61 GLN n 1 62 ILE n 1 63 TRP n 1 64 ASP n 1 65 THR n 1 66 ALA n 1 67 GLY n 1 68 GLN n 1 69 GLU n 1 70 ARG n 1 71 PHE n 1 72 ARG n 1 73 THR n 1 74 ILE n 1 75 THR n 1 76 SER n 1 77 SER n 1 78 TYR n 1 79 TYR n 1 80 ARG n 1 81 GLY n 1 82 ALA n 1 83 HIS n 1 84 GLY n 1 85 ILE n 1 86 ILE n 1 87 ILE n 1 88 VAL n 1 89 TYR n 1 90 ASP n 1 91 VAL n 1 92 THR n 1 93 ASP n 1 94 ARG n 1 95 ASP n 1 96 SER n 1 97 PHE n 1 98 ASP n 1 99 ASN n 1 100 VAL n 1 101 LYS n 1 102 GLN n 1 103 TRP n 1 104 ILE n 1 105 GLN n 1 106 GLU n 1 107 ILE n 1 108 ASP n 1 109 ARG n 1 110 TYR n 1 111 ALA n 1 112 MET n 1 113 GLU n 1 114 ASN n 1 115 VAL n 1 116 ASN n 1 117 LYS n 1 118 LEU n 1 119 LEU n 1 120 VAL n 1 121 GLY n 1 122 ASN n 1 123 LYS n 1 124 CYS n 1 125 ASP n 1 126 LEU n 1 127 VAL n 1 128 SER n 1 129 LYS n 1 130 ARG n 1 131 VAL n 1 132 VAL n 1 133 THR n 1 134 SER n 1 135 ASP n 1 136 GLU n 1 137 GLY n 1 138 ARG n 1 139 GLU n 1 140 LEU n 1 141 ALA n 1 142 ASP n 1 143 SER n 1 144 HIS n 1 145 GLY n 1 146 ILE n 1 147 LYS n 1 148 PHE n 1 149 ILE n 1 150 GLU n 1 151 THR n 1 152 SER n 1 153 ALA n 1 154 LYS n 1 155 ASN n 1 156 ALA n 1 157 TYR n 1 158 ASN n 1 159 VAL n 1 160 GLU n 1 161 GLN n 1 162 ALA n 1 163 PHE n 1 164 HIS n 1 165 THR n 1 166 MET n 1 167 ALA n 1 168 GLY n 1 169 GLU n 1 170 ILE n 1 171 LYS n 1 172 LYS n 1 173 ARG n 1 174 VAL n 1 175 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Cryptosporidium _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Cryptosporidium parvum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5807 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Rosetta-R3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'p15-tev-lic derived from pET15' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7YYW6_CRYPV _struct_ref.pdbx_db_accession Q7YYW6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQERFRTITSSYYRG AHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQ AFHTMAGEIKKRVQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2RHD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 175 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7YYW6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 174 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 175 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2RHD _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q7YYW6 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2RHD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.77 _exptl_crystal.density_percent_sol 67.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details '0.2M CaCl2, 20% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 297K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-07-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97942 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97942 # _reflns.entry_id 2RHD _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.06 _reflns.d_resolution_low 50 _reflns.number_all 18805 _reflns.number_obs 18805 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_Rsym_value 0.088 _reflns.pdbx_netI_over_sigmaI 9.8 _reflns.B_iso_Wilson_estimate 25.8 _reflns.pdbx_redundancy 6.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.06 _reflns_shell.d_res_low 2.13 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.321 _reflns_shell.pdbx_Rsym_value 0.321 _reflns_shell.meanI_over_sigI_obs 4.92 _reflns_shell.pdbx_redundancy 4.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1838 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2RHD _refine.ls_number_reflns_obs 18186 _refine.ls_number_reflns_all 18186 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.06 _refine.ls_percent_reflns_obs 99.41 _refine.ls_R_factor_obs 0.18064 _refine.ls_R_factor_all 0.18064 _refine.ls_R_factor_R_work 0.17969 _refine.ls_R_factor_R_free 0.2089 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 3.2 _refine.ls_number_reflns_R_free 601 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 27.802 _refine.aniso_B[1][1] 1.01 _refine.aniso_B[2][2] 1.01 _refine.aniso_B[3][3] -1.52 _refine.aniso_B[1][2] 0.51 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. Program COOT 0.1.2 has also been used in refinement.' _refine.pdbx_starting_model 'PDB entry 2F9L' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.132 _refine.pdbx_overall_ESU_R_Free 0.126 _refine.overall_SU_ML 0.081 _refine.overall_SU_B 2.930 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1296 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 182 _refine_hist.number_atoms_total 1509 _refine_hist.d_res_high 2.06 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 1347 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.155 1.973 ? 1826 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.462 5.000 ? 162 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.525 24.194 ? 62 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.926 15.000 ? 231 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10.955 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.077 0.200 ? 207 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 992 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.188 0.200 ? 586 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.300 0.200 ? 925 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.113 0.200 ? 122 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.196 0.200 ? 24 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.126 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.793 1.500 ? 835 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.400 2.000 ? 1301 'X-RAY DIFFRACTION' ? r_scbond_it 2.054 3.000 ? 604 'X-RAY DIFFRACTION' ? r_scangle_it 3.104 4.500 ? 525 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.06 _refine_ls_shell.d_res_low 2.11 _refine_ls_shell.number_reflns_R_work 1306 _refine_ls_shell.R_factor_R_work 0.198 _refine_ls_shell.percent_reflns_obs 98.18 _refine_ls_shell.R_factor_R_free 0.247 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 40 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2RHD _struct.title 'Crystal structure of Cryptosporidium parvum small GTPase RAB1A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RHD _struct_keywords.pdbx_keywords 'NUCLEOTIDE BINDING PROTEIN' _struct_keywords.text ;GTPase, RAB1A, Cryptosporidium parvum, SGC, in situ, proteolysis, GTP-binding, Nucleotide-binding, NUCLEOTIDE BINDING PROTEIN, Structural Genomics, Structural Genomics Consortium ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details 'Authors state that the biological unit of this protein is unknown.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 21 ? ASP A 32 ? GLY A 21 ASP A 32 1 ? 12 HELX_P HELX_P2 2 ASP A 93 ? ASN A 99 ? ASP A 93 ASN A 99 1 ? 7 HELX_P HELX_P3 3 ASN A 99 ? ALA A 111 ? ASN A 99 ALA A 111 1 ? 13 HELX_P HELX_P4 4 LEU A 126 ? ARG A 130 ? LEU A 126 ARG A 130 5 ? 5 HELX_P HELX_P5 5 THR A 133 ? HIS A 144 ? THR A 133 HIS A 144 1 ? 12 HELX_P HELX_P6 6 ASN A 158 ? GLN A 175 ? ASN A 158 GLN A 175 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 23 OG ? ? ? 1_555 B MG . MG ? ? A SER 23 A MG 1001 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc2 metalc ? ? A ASP 95 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 95 A MG 1002 1_555 ? ? ? ? ? ? ? 2.436 ? ? metalc3 metalc ? ? A ASP 95 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 95 A MG 1003 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 E GDP . O3B ? ? A MG 1001 A GDP 3800 1_555 ? ? ? ? ? ? ? 2.230 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1001 A HOH 3808 1_555 ? ? ? ? ? ? ? 2.351 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1001 A HOH 3809 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc7 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1001 A HOH 3834 1_555 ? ? ? ? ? ? ? 2.265 ? ? metalc8 metalc ? ? B MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1001 A HOH 3861 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1002 A HOH 3806 1_555 ? ? ? ? ? ? ? 2.399 ? ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1002 A HOH 3831 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc11 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1003 A HOH 3816 1_555 ? ? ? ? ? ? ? 2.288 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 47 ? LEU A 53 ? LYS A 47 LEU A 53 A 2 LYS A 56 ? TRP A 63 ? LYS A 56 TRP A 63 A 3 TYR A 8 ? ILE A 15 ? TYR A 8 ILE A 15 A 4 GLY A 84 ? ASP A 90 ? GLY A 84 ASP A 90 A 5 ASN A 116 ? ASN A 122 ? ASN A 116 ASN A 122 A 6 LYS A 147 ? GLU A 150 ? LYS A 147 GLU A 150 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 51 ? N ILE A 51 O VAL A 58 ? O VAL A 58 A 2 3 O LYS A 59 ? O LYS A 59 N TYR A 8 ? N TYR A 8 A 3 4 N ILE A 15 ? N ILE A 15 O VAL A 88 ? O VAL A 88 A 4 5 N TYR A 89 ? N TYR A 89 O ASN A 122 ? O ASN A 122 A 5 6 N LEU A 119 ? N LEU A 119 O LYS A 147 ? O LYS A 147 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1001 ? 6 'BINDING SITE FOR RESIDUE MG A 1001' AC2 Software A MG 1002 ? 9 'BINDING SITE FOR RESIDUE MG A 1002' AC3 Software A MG 1003 ? 7 'BINDING SITE FOR RESIDUE MG A 1003' AC4 Software A GDP 3800 ? 23 'BINDING SITE FOR RESIDUE GDP A 3800' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 23 ? SER A 23 . ? 1_555 ? 2 AC1 6 GDP E . ? GDP A 3800 . ? 1_555 ? 3 AC1 6 HOH F . ? HOH A 3808 . ? 1_555 ? 4 AC1 6 HOH F . ? HOH A 3809 . ? 1_555 ? 5 AC1 6 HOH F . ? HOH A 3834 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH A 3861 . ? 1_555 ? 7 AC2 9 ASP A 95 ? ASP A 95 . ? 1_555 ? 8 AC2 9 ASP A 95 ? ASP A 95 . ? 2_655 ? 9 AC2 9 ASP A 95 ? ASP A 95 . ? 3_665 ? 10 AC2 9 HOH F . ? HOH A 3806 . ? 3_665 ? 11 AC2 9 HOH F . ? HOH A 3806 . ? 2_655 ? 12 AC2 9 HOH F . ? HOH A 3806 . ? 1_555 ? 13 AC2 9 HOH F . ? HOH A 3831 . ? 3_665 ? 14 AC2 9 HOH F . ? HOH A 3831 . ? 2_655 ? 15 AC2 9 HOH F . ? HOH A 3831 . ? 1_555 ? 16 AC3 7 ASP A 93 ? ASP A 93 . ? 3_665 ? 17 AC3 7 ASP A 95 ? ASP A 95 . ? 1_555 ? 18 AC3 7 HOH F . ? HOH A 3804 . ? 3_665 ? 19 AC3 7 HOH F . ? HOH A 3814 . ? 3_665 ? 20 AC3 7 HOH F . ? HOH A 3816 . ? 1_555 ? 21 AC3 7 HOH F . ? HOH A 3818 . ? 3_665 ? 22 AC3 7 HOH F . ? HOH A 3821 . ? 3_665 ? 23 AC4 23 GLY A 19 ? GLY A 19 . ? 1_555 ? 24 AC4 23 VAL A 20 ? VAL A 20 . ? 1_555 ? 25 AC4 23 GLY A 21 ? GLY A 21 . ? 1_555 ? 26 AC4 23 LYS A 22 ? LYS A 22 . ? 1_555 ? 27 AC4 23 SER A 23 ? SER A 23 . ? 1_555 ? 28 AC4 23 CYS A 24 ? CYS A 24 . ? 1_555 ? 29 AC4 23 TYR A 34 ? TYR A 34 . ? 1_555 ? 30 AC4 23 ASP A 36 ? ASP A 36 . ? 1_555 ? 31 AC4 23 LYS A 101 ? LYS A 101 . ? 2_655 ? 32 AC4 23 ASN A 122 ? ASN A 122 . ? 1_555 ? 33 AC4 23 LYS A 123 ? LYS A 123 . ? 1_555 ? 34 AC4 23 ASP A 125 ? ASP A 125 . ? 1_555 ? 35 AC4 23 LEU A 126 ? LEU A 126 . ? 1_555 ? 36 AC4 23 SER A 152 ? SER A 152 . ? 1_555 ? 37 AC4 23 ALA A 153 ? ALA A 153 . ? 1_555 ? 38 AC4 23 LYS A 154 ? LYS A 154 . ? 1_555 ? 39 AC4 23 MG B . ? MG A 1001 . ? 1_555 ? 40 AC4 23 HOH F . ? HOH A 3809 . ? 1_555 ? 41 AC4 23 HOH F . ? HOH A 3834 . ? 1_555 ? 42 AC4 23 HOH F . ? HOH A 3846 . ? 1_555 ? 43 AC4 23 HOH F . ? HOH A 3858 . ? 1_555 ? 44 AC4 23 HOH F . ? HOH A 3888 . ? 1_555 ? 45 AC4 23 HOH F . ? HOH A 3936 . ? 1_555 ? # _database_PDB_matrix.entry_id 2RHD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2RHD _atom_sites.fract_transf_matrix[1][1] 0.009312 _atom_sites.fract_transf_matrix[1][2] 0.005376 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010753 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022111 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 MET 2 2 ? ? ? A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 GLN 68 68 ? ? ? A . n A 1 69 GLU 69 69 ? ? ? A . n A 1 70 ARG 70 70 ? ? ? A . n A 1 71 PHE 71 71 ? ? ? A . n A 1 72 ARG 72 72 ? ? ? A . n A 1 73 THR 73 73 ? ? ? A . n A 1 74 ILE 74 74 ? ? ? A . n A 1 75 THR 75 75 ? ? ? A . n A 1 76 SER 76 76 ? ? ? A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 TRP 103 103 103 TRP TRP A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 TYR 110 110 110 TYR TYR A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 MET 112 112 112 MET MET A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 CYS 124 124 124 CYS CYS A . n A 1 125 ASP 125 125 125 ASP ASP A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 ARG 138 138 138 ARG ARG A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 HIS 144 144 144 HIS HIS A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 ILE 146 146 146 ILE ILE A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 PHE 148 148 148 PHE PHE A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 TYR 157 157 157 TYR TYR A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 PHE 163 163 163 PHE PHE A . n A 1 164 HIS 164 164 164 HIS HIS A . n A 1 165 THR 165 165 165 THR THR A . n A 1 166 MET 166 166 166 MET MET A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 LYS 171 171 171 LYS LYS A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 GLN 175 175 175 GLN GLN A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 1001 1001 MG MG A . C 2 MG 1 1002 1002 MG MG A . D 2 MG 1 1003 1003 MG MG A . E 3 GDP 1 3800 3800 GDP GDP A . F 4 HOH 1 3801 3801 HOH HOH A . F 4 HOH 2 3802 3802 HOH HOH A . F 4 HOH 3 3803 3803 HOH HOH A . F 4 HOH 4 3804 3804 HOH HOH A . F 4 HOH 5 3805 3805 HOH HOH A . F 4 HOH 6 3806 3806 HOH HOH A . F 4 HOH 7 3807 3807 HOH HOH A . F 4 HOH 8 3808 3808 HOH HOH A . F 4 HOH 9 3809 3809 HOH HOH A . F 4 HOH 10 3810 3810 HOH HOH A . F 4 HOH 11 3811 3811 HOH HOH A . F 4 HOH 12 3812 3812 HOH HOH A . F 4 HOH 13 3813 3813 HOH HOH A . F 4 HOH 14 3814 3814 HOH HOH A . F 4 HOH 15 3815 3815 HOH HOH A . F 4 HOH 16 3816 3816 HOH HOH A . F 4 HOH 17 3817 3817 HOH HOH A . F 4 HOH 18 3818 3818 HOH HOH A . F 4 HOH 19 3819 3819 HOH HOH A . F 4 HOH 20 3820 3820 HOH HOH A . F 4 HOH 21 3821 3821 HOH HOH A . F 4 HOH 22 3822 3822 HOH HOH A . F 4 HOH 23 3823 3823 HOH HOH A . F 4 HOH 24 3824 3824 HOH HOH A . F 4 HOH 25 3825 3825 HOH HOH A . F 4 HOH 26 3826 3826 HOH HOH A . F 4 HOH 27 3827 3827 HOH HOH A . F 4 HOH 28 3828 3828 HOH HOH A . F 4 HOH 29 3829 3829 HOH HOH A . F 4 HOH 30 3830 3830 HOH HOH A . F 4 HOH 31 3831 3831 HOH HOH A . F 4 HOH 32 3832 3832 HOH HOH A . F 4 HOH 33 3833 3833 HOH HOH A . F 4 HOH 34 3834 3834 HOH HOH A . F 4 HOH 35 3835 3835 HOH HOH A . F 4 HOH 36 3836 3836 HOH HOH A . F 4 HOH 37 3837 3837 HOH HOH A . F 4 HOH 38 3838 3838 HOH HOH A . F 4 HOH 39 3839 3839 HOH HOH A . F 4 HOH 40 3840 3840 HOH HOH A . F 4 HOH 41 3841 3841 HOH HOH A . F 4 HOH 42 3842 3842 HOH HOH A . F 4 HOH 43 3843 3843 HOH HOH A . F 4 HOH 44 3844 3844 HOH HOH A . F 4 HOH 45 3845 3845 HOH HOH A . F 4 HOH 46 3846 3846 HOH HOH A . F 4 HOH 47 3847 3847 HOH HOH A . F 4 HOH 48 3848 3848 HOH HOH A . F 4 HOH 49 3849 3849 HOH HOH A . F 4 HOH 50 3850 3850 HOH HOH A . F 4 HOH 51 3851 3851 HOH HOH A . F 4 HOH 52 3852 3852 HOH HOH A . F 4 HOH 53 3853 3853 HOH HOH A . F 4 HOH 54 3854 3854 HOH HOH A . F 4 HOH 55 3855 3855 HOH HOH A . F 4 HOH 56 3856 3856 HOH HOH A . F 4 HOH 57 3857 3857 HOH HOH A . F 4 HOH 58 3858 3858 HOH HOH A . F 4 HOH 59 3859 3859 HOH HOH A . F 4 HOH 60 3860 3860 HOH HOH A . F 4 HOH 61 3861 3861 HOH HOH A . F 4 HOH 62 3862 3862 HOH HOH A . F 4 HOH 63 3863 3863 HOH HOH A . F 4 HOH 64 3864 3864 HOH HOH A . F 4 HOH 65 3865 3865 HOH HOH A . F 4 HOH 66 3866 3866 HOH HOH A . F 4 HOH 67 3867 3867 HOH HOH A . F 4 HOH 68 3868 3868 HOH HOH A . F 4 HOH 69 3869 3869 HOH HOH A . F 4 HOH 70 3870 3870 HOH HOH A . F 4 HOH 71 3871 3871 HOH HOH A . F 4 HOH 72 3872 3872 HOH HOH A . F 4 HOH 73 3873 3873 HOH HOH A . F 4 HOH 74 3874 3874 HOH HOH A . F 4 HOH 75 3875 3875 HOH HOH A . F 4 HOH 76 3876 3876 HOH HOH A . F 4 HOH 77 3877 3877 HOH HOH A . F 4 HOH 78 3878 3878 HOH HOH A . F 4 HOH 79 3879 3879 HOH HOH A . F 4 HOH 80 3880 3880 HOH HOH A . F 4 HOH 81 3881 3881 HOH HOH A . F 4 HOH 82 3882 3882 HOH HOH A . F 4 HOH 83 3883 3883 HOH HOH A . F 4 HOH 84 3884 3884 HOH HOH A . F 4 HOH 85 3885 3885 HOH HOH A . F 4 HOH 86 3886 3886 HOH HOH A . F 4 HOH 87 3887 3887 HOH HOH A . F 4 HOH 88 3888 3888 HOH HOH A . F 4 HOH 89 3889 3889 HOH HOH A . F 4 HOH 90 3890 3890 HOH HOH A . F 4 HOH 91 3891 3891 HOH HOH A . F 4 HOH 92 3892 3892 HOH HOH A . F 4 HOH 93 3893 3893 HOH HOH A . F 4 HOH 94 3894 3894 HOH HOH A . F 4 HOH 95 3895 3895 HOH HOH A . F 4 HOH 96 3896 3896 HOH HOH A . F 4 HOH 97 3897 3897 HOH HOH A . F 4 HOH 98 3898 3898 HOH HOH A . F 4 HOH 99 3899 3899 HOH HOH A . F 4 HOH 100 3900 3900 HOH HOH A . F 4 HOH 101 3901 3901 HOH HOH A . F 4 HOH 102 3902 3902 HOH HOH A . F 4 HOH 103 3903 3903 HOH HOH A . F 4 HOH 104 3904 3904 HOH HOH A . F 4 HOH 105 3905 3905 HOH HOH A . F 4 HOH 106 3906 3906 HOH HOH A . F 4 HOH 107 3907 3907 HOH HOH A . F 4 HOH 108 3908 3908 HOH HOH A . F 4 HOH 109 3909 3909 HOH HOH A . F 4 HOH 110 3910 3910 HOH HOH A . F 4 HOH 111 3911 3911 HOH HOH A . F 4 HOH 112 3912 3912 HOH HOH A . F 4 HOH 113 3913 3913 HOH HOH A . F 4 HOH 114 3914 3914 HOH HOH A . F 4 HOH 115 3915 3915 HOH HOH A . F 4 HOH 116 3916 3916 HOH HOH A . F 4 HOH 117 3917 3917 HOH HOH A . F 4 HOH 118 3918 3918 HOH HOH A . F 4 HOH 119 3919 3919 HOH HOH A . F 4 HOH 120 3920 3920 HOH HOH A . F 4 HOH 121 3921 3921 HOH HOH A . F 4 HOH 122 3922 3922 HOH HOH A . F 4 HOH 123 3923 3923 HOH HOH A . F 4 HOH 124 3924 3924 HOH HOH A . F 4 HOH 125 3925 3925 HOH HOH A . F 4 HOH 126 3926 3926 HOH HOH A . F 4 HOH 127 3927 3927 HOH HOH A . F 4 HOH 128 3928 3928 HOH HOH A . F 4 HOH 129 3929 3929 HOH HOH A . F 4 HOH 130 3930 3930 HOH HOH A . F 4 HOH 131 3931 3931 HOH HOH A . F 4 HOH 132 3932 3932 HOH HOH A . F 4 HOH 133 3933 3933 HOH HOH A . F 4 HOH 134 3934 3934 HOH HOH A . F 4 HOH 135 3935 3935 HOH HOH A . F 4 HOH 136 3936 3936 HOH HOH A . F 4 HOH 137 3937 3937 HOH HOH A . F 4 HOH 138 3938 3938 HOH HOH A . F 4 HOH 139 3939 3939 HOH HOH A . F 4 HOH 140 3940 3940 HOH HOH A . F 4 HOH 141 3941 3941 HOH HOH A . F 4 HOH 142 3942 3942 HOH HOH A . F 4 HOH 143 3943 3943 HOH HOH A . F 4 HOH 144 3944 3944 HOH HOH A . F 4 HOH 145 3945 3945 HOH HOH A . F 4 HOH 146 3946 3946 HOH HOH A . F 4 HOH 147 3947 3947 HOH HOH A . F 4 HOH 148 3948 3948 HOH HOH A . F 4 HOH 149 3949 3949 HOH HOH A . F 4 HOH 150 3950 3950 HOH HOH A . F 4 HOH 151 3951 3951 HOH HOH A . F 4 HOH 152 3952 3952 HOH HOH A . F 4 HOH 153 3953 3953 HOH HOH A . F 4 HOH 154 3954 3954 HOH HOH A . F 4 HOH 155 3955 3955 HOH HOH A . F 4 HOH 156 3956 3956 HOH HOH A . F 4 HOH 157 3957 3957 HOH HOH A . F 4 HOH 158 3958 3958 HOH HOH A . F 4 HOH 159 3959 3959 HOH HOH A . F 4 HOH 160 3960 3960 HOH HOH A . F 4 HOH 161 3963 3963 HOH HOH A . F 4 HOH 162 3964 3964 HOH HOH A . F 4 HOH 163 3965 3965 HOH HOH A . F 4 HOH 164 3966 3966 HOH HOH A . F 4 HOH 165 3967 3967 HOH HOH A . F 4 HOH 166 3969 3969 HOH HOH A . F 4 HOH 167 3971 3971 HOH HOH A . F 4 HOH 168 3972 3972 HOH HOH A . F 4 HOH 169 3973 3973 HOH HOH A . F 4 HOH 170 3974 3974 HOH HOH A . F 4 HOH 171 3975 3975 HOH HOH A . F 4 HOH 172 3976 3976 HOH HOH A . F 4 HOH 173 3979 3979 HOH HOH A . F 4 HOH 174 3980 3980 HOH HOH A . F 4 HOH 175 3981 3981 HOH HOH A . F 4 HOH 176 3982 3982 HOH HOH A . F 4 HOH 177 3983 3983 HOH HOH A . F 4 HOH 178 3984 3984 HOH HOH A . F 4 HOH 179 3985 3985 HOH HOH A . F 4 HOH 180 3986 3986 HOH HOH A . F 4 HOH 181 3987 3987 HOH HOH A . F 4 HOH 182 3988 3988 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A MG 1002 ? C MG . 2 1 A HOH 3801 ? F HOH . 3 1 A HOH 3831 ? F HOH . 4 1 A HOH 3860 ? F HOH . 5 1 A HOH 3863 ? F HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 23 ? A SER 23 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O3B ? E GDP . ? A GDP 3800 ? 1_555 88.0 ? 2 OG ? A SER 23 ? A SER 23 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3808 ? 1_555 92.3 ? 3 O3B ? E GDP . ? A GDP 3800 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3808 ? 1_555 95.8 ? 4 OG ? A SER 23 ? A SER 23 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3809 ? 1_555 87.6 ? 5 O3B ? E GDP . ? A GDP 3800 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3809 ? 1_555 84.7 ? 6 O ? F HOH . ? A HOH 3808 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3809 ? 1_555 179.5 ? 7 OG ? A SER 23 ? A SER 23 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3834 ? 1_555 174.6 ? 8 O3B ? E GDP . ? A GDP 3800 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3834 ? 1_555 89.9 ? 9 O ? F HOH . ? A HOH 3808 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3834 ? 1_555 82.9 ? 10 O ? F HOH . ? A HOH 3809 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3834 ? 1_555 97.1 ? 11 OG ? A SER 23 ? A SER 23 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3861 ? 1_555 82.9 ? 12 O3B ? E GDP . ? A GDP 3800 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3861 ? 1_555 170.6 ? 13 O ? F HOH . ? A HOH 3808 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3861 ? 1_555 87.1 ? 14 O ? F HOH . ? A HOH 3809 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3861 ? 1_555 92.4 ? 15 O ? F HOH . ? A HOH 3834 ? 1_555 MG ? B MG . ? A MG 1001 ? 1_555 O ? F HOH . ? A HOH 3861 ? 1_555 99.4 ? 16 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O ? F HOH . ? A HOH 3806 ? 1_555 76.6 ? 17 OD2 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O ? F HOH . ? A HOH 3831 ? 1_555 124.2 ? 18 O ? F HOH . ? A HOH 3806 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O ? F HOH . ? A HOH 3831 ? 1_555 71.2 ? 19 OD1 ? A ASP 95 ? A ASP 95 ? 1_555 MG ? D MG . ? A MG 1003 ? 1_555 O ? F HOH . ? A HOH 3816 ? 1_555 98.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.value' 17 3 'Structure model' '_struct_conn.pdbx_dist_value' 18 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 3 'Structure model' '_struct_ref_seq_dif.details' 25 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 26 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 27 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-3000 'data collection' . ? 2 HKL-3000 'data reduction' . ? 3 HKL-3000 'data scaling' . ? 4 PHASER phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 54 ? ? 53.77 -97.43 2 1 ALA A 156 ? ? 78.12 -4.11 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 15 ? CD1 ? A ILE 15 CD1 2 1 Y 1 A GLU 54 ? CG ? A GLU 54 CG 3 1 Y 1 A GLU 54 ? CD ? A GLU 54 CD 4 1 Y 1 A GLU 54 ? OE1 ? A GLU 54 OE1 5 1 Y 1 A GLU 54 ? OE2 ? A GLU 54 OE2 6 1 Y 1 A GLU 113 ? CG ? A GLU 113 CG 7 1 Y 1 A GLU 113 ? CD ? A GLU 113 CD 8 1 Y 1 A GLU 113 ? OE1 ? A GLU 113 OE1 9 1 Y 1 A GLU 113 ? OE2 ? A GLU 113 OE2 10 1 Y 1 A LYS 129 ? CE ? A LYS 129 CE 11 1 Y 1 A LYS 129 ? NZ ? A LYS 129 NZ 12 1 Y 1 A LYS 172 ? CD ? A LYS 172 CD 13 1 Y 1 A LYS 172 ? CE ? A LYS 172 CE 14 1 Y 1 A LYS 172 ? NZ ? A LYS 172 NZ 15 1 Y 1 A GLN 175 ? CG ? A GLN 175 CG 16 1 Y 1 A GLN 175 ? CD ? A GLN 175 CD 17 1 Y 1 A GLN 175 ? OE1 ? A GLN 175 OE1 18 1 Y 1 A GLN 175 ? NE2 ? A GLN 175 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A MET 2 ? A MET 2 3 1 Y 1 A GLN 68 ? A GLN 68 4 1 Y 1 A GLU 69 ? A GLU 69 5 1 Y 1 A ARG 70 ? A ARG 70 6 1 Y 1 A PHE 71 ? A PHE 71 7 1 Y 1 A ARG 72 ? A ARG 72 8 1 Y 1 A THR 73 ? A THR 73 9 1 Y 1 A ILE 74 ? A ILE 74 10 1 Y 1 A THR 75 ? A THR 75 11 1 Y 1 A SER 76 ? A SER 76 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2F9L _pdbx_initial_refinement_model.details 'PDB entry 2F9L' #