data_2RI6 # _entry.id 2RI6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RI6 pdb_00002ri6 10.2210/pdb2ri6/pdb RCSB RCSB044887 ? ? WWPDB D_1000044887 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2007-11-06 _pdbx_database_PDB_obs_spr.pdb_id 2RI6 _pdbx_database_PDB_obs_spr.replace_pdb_id 2PU6 _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2OG1 . unspecified PDB 1J1I . unspecified PDB 1U2E . unspecified PDB 2PU7 . unspecified PDB 1C4X . unspecified PDB 2D0D . unspecified # _pdbx_database_status.entry_id 2RI6 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-10-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bhowmik, S.' 1 'Bolin, J.T.' 2 # _citation.id primary _citation.title ;The tautomeric half-reaction of BphD, a C-C bond hydrolase. Kinetic and structural evidence supporting a key role for histidine 265 of the catalytic triad. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 282 _citation.page_first 19894 _citation.page_last 19904 _citation.year 2007 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17442675 _citation.pdbx_database_id_DOI 10.1074/jbc.M702237200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Horsman, G.P.' 1 ? primary 'Bhowmik, S.' 2 ? primary 'Seah, S.Y.' 3 ? primary 'Kumar, P.' 4 ? primary 'Bolin, J.T.' 5 ? primary 'Eltis, L.D.' 6 ? # _cell.length_a 117.293 _cell.length_b 117.293 _cell.length_c 87.306 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2RI6 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.entry_id 2RI6 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 98 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat '2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase' 31749.268 1 3.7.1.- S112A ? ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 non-polymer syn 'MALONATE ION' 102.046 2 ? ? ? ? 4 water nat water 18.015 144 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LTESSTSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMD EQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEP SYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLD HGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLRHA ; _entity_poly.pdbx_seq_one_letter_code_can ;LTESSTSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMD EQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEP SYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLD HGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLRHA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 THR n 1 3 GLU n 1 4 SER n 1 5 SER n 1 6 THR n 1 7 SER n 1 8 LYS n 1 9 PHE n 1 10 VAL n 1 11 LYS n 1 12 ILE n 1 13 ASN n 1 14 GLU n 1 15 LYS n 1 16 GLY n 1 17 PHE n 1 18 SER n 1 19 ASP n 1 20 PHE n 1 21 ASN n 1 22 ILE n 1 23 HIS n 1 24 TYR n 1 25 ASN n 1 26 GLU n 1 27 ALA n 1 28 GLY n 1 29 ASN n 1 30 GLY n 1 31 GLU n 1 32 THR n 1 33 VAL n 1 34 ILE n 1 35 MET n 1 36 LEU n 1 37 HIS n 1 38 GLY n 1 39 GLY n 1 40 GLY n 1 41 PRO n 1 42 GLY n 1 43 ALA n 1 44 GLY n 1 45 GLY n 1 46 TRP n 1 47 SER n 1 48 ASN n 1 49 TYR n 1 50 TYR n 1 51 ARG n 1 52 ASN n 1 53 VAL n 1 54 GLY n 1 55 PRO n 1 56 PHE n 1 57 VAL n 1 58 ASP n 1 59 ALA n 1 60 GLY n 1 61 TYR n 1 62 ARG n 1 63 VAL n 1 64 ILE n 1 65 LEU n 1 66 LYS n 1 67 ASP n 1 68 SER n 1 69 PRO n 1 70 GLY n 1 71 PHE n 1 72 ASN n 1 73 LYS n 1 74 SER n 1 75 ASP n 1 76 ALA n 1 77 VAL n 1 78 VAL n 1 79 MET n 1 80 ASP n 1 81 GLU n 1 82 GLN n 1 83 ARG n 1 84 GLY n 1 85 LEU n 1 86 VAL n 1 87 ASN n 1 88 ALA n 1 89 ARG n 1 90 ALA n 1 91 VAL n 1 92 LYS n 1 93 GLY n 1 94 LEU n 1 95 MET n 1 96 ASP n 1 97 ALA n 1 98 LEU n 1 99 ASP n 1 100 ILE n 1 101 ASP n 1 102 ARG n 1 103 ALA n 1 104 HIS n 1 105 LEU n 1 106 VAL n 1 107 GLY n 1 108 ASN n 1 109 ALA n 1 110 MET n 1 111 GLY n 1 112 GLY n 1 113 ALA n 1 114 THR n 1 115 ALA n 1 116 LEU n 1 117 ASN n 1 118 PHE n 1 119 ALA n 1 120 LEU n 1 121 GLU n 1 122 TYR n 1 123 PRO n 1 124 ASP n 1 125 ARG n 1 126 ILE n 1 127 GLY n 1 128 LYS n 1 129 LEU n 1 130 ILE n 1 131 LEU n 1 132 MET n 1 133 GLY n 1 134 PRO n 1 135 GLY n 1 136 GLY n 1 137 LEU n 1 138 GLY n 1 139 PRO n 1 140 SER n 1 141 MET n 1 142 PHE n 1 143 ALA n 1 144 PRO n 1 145 MET n 1 146 PRO n 1 147 MET n 1 148 GLU n 1 149 GLY n 1 150 ILE n 1 151 LYS n 1 152 LEU n 1 153 LEU n 1 154 PHE n 1 155 LYS n 1 156 LEU n 1 157 TYR n 1 158 ALA n 1 159 GLU n 1 160 PRO n 1 161 SER n 1 162 TYR n 1 163 GLU n 1 164 THR n 1 165 LEU n 1 166 LYS n 1 167 GLN n 1 168 MET n 1 169 LEU n 1 170 GLN n 1 171 VAL n 1 172 PHE n 1 173 LEU n 1 174 TYR n 1 175 ASP n 1 176 GLN n 1 177 SER n 1 178 LEU n 1 179 ILE n 1 180 THR n 1 181 GLU n 1 182 GLU n 1 183 LEU n 1 184 LEU n 1 185 GLN n 1 186 GLY n 1 187 ARG n 1 188 TRP n 1 189 GLU n 1 190 ALA n 1 191 ILE n 1 192 GLN n 1 193 ARG n 1 194 GLN n 1 195 PRO n 1 196 GLU n 1 197 HIS n 1 198 LEU n 1 199 LYS n 1 200 ASN n 1 201 PHE n 1 202 LEU n 1 203 ILE n 1 204 SER n 1 205 ALA n 1 206 GLN n 1 207 LYS n 1 208 ALA n 1 209 PRO n 1 210 LEU n 1 211 SER n 1 212 THR n 1 213 TRP n 1 214 ASP n 1 215 VAL n 1 216 THR n 1 217 ALA n 1 218 ARG n 1 219 LEU n 1 220 GLY n 1 221 GLU n 1 222 ILE n 1 223 LYS n 1 224 ALA n 1 225 LYS n 1 226 THR n 1 227 PHE n 1 228 ILE n 1 229 THR n 1 230 TRP n 1 231 GLY n 1 232 ARG n 1 233 ASP n 1 234 ASP n 1 235 ARG n 1 236 PHE n 1 237 VAL n 1 238 PRO n 1 239 LEU n 1 240 ASP n 1 241 HIS n 1 242 GLY n 1 243 LEU n 1 244 LYS n 1 245 LEU n 1 246 LEU n 1 247 TRP n 1 248 ASN n 1 249 ILE n 1 250 ASP n 1 251 ASP n 1 252 ALA n 1 253 ARG n 1 254 LEU n 1 255 HIS n 1 256 VAL n 1 257 PHE n 1 258 SER n 1 259 LYS n 1 260 CYS n 1 261 GLY n 1 262 HIS n 1 263 TRP n 1 264 ALA n 1 265 GLN n 1 266 TRP n 1 267 GLU n 1 268 HIS n 1 269 ALA n 1 270 ASP n 1 271 GLU n 1 272 PHE n 1 273 ASN n 1 274 ARG n 1 275 LEU n 1 276 VAL n 1 277 ILE n 1 278 ASP n 1 279 PHE n 1 280 LEU n 1 281 ARG n 1 282 HIS n 1 283 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Burkholderia xenovorans' _entity_src_nat.pdbx_ncbi_taxonomy_id 266265 _entity_src_nat.genus Burkholderia _entity_src_nat.species 'Burkholderia xenovorans' _entity_src_nat.strain LB400 _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BPHD_BURXL _struct_ref.pdbx_db_accession P47229 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LTESSTSKFVKINEKGFSDFNIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMD EQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEP SYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLD HGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFLRHA ; _struct_ref.pdbx_align_begin 4 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2RI6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 283 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P47229 _struct_ref_seq.db_align_beg 4 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 286 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 4 _struct_ref_seq.pdbx_auth_seq_align_end 286 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2RI6 _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 109 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P47229 _struct_ref_seq_dif.db_mon_id SER _struct_ref_seq_dif.pdbx_seq_db_seq_num 112 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 112 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLI non-polymer . 'MALONATE ION' ? 'C3 H2 O4 -2' 102.046 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2RI6 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '1.9 M sodium malonate, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2005-06-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 2RI6 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 1.68 _reflns.d_resolution_low 50.0 _reflns.number_all ? _reflns.number_obs 34855 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 12.6 _reflns.pdbx_netI_over_sigmaI 18.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 12.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.68 _reflns_shell.d_res_low 1.74 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 8.1 _reflns_shell.pdbx_Rsym_value 27.1 _reflns_shell.pdbx_redundancy 11.8 _reflns_shell.number_unique_all 3424 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2RI6 _refine.ls_d_res_high 1.680 _refine.ls_d_res_low 44.95 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.750 _refine.ls_number_reflns_obs 34845 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.176 _refine.ls_R_factor_R_work 0.175 _refine.ls_R_factor_R_free 0.201 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1752 _refine.B_iso_mean 18.094 _refine.aniso_B[1][1] 0.220 _refine.aniso_B[2][2] 0.220 _refine.aniso_B[3][3] -0.450 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.949 _refine.pdbx_overall_ESU_R 0.096 _refine.pdbx_overall_ESU_R_Free 0.093 _refine.overall_SU_ML 0.062 _refine.overall_SU_B 1.825 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2RI6 _refine_analyze.Luzzati_coordinate_error_obs 0.173 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2239 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 2398 _refine_hist.d_res_high 1.680 _refine_hist.d_res_low 44.95 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2345 0.010 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3182 1.218 1.955 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 296 5.484 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 111 38.767 23.964 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 396 13.847 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14 17.194 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 336 0.085 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1819 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 1143 0.200 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1588 0.307 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 121 0.117 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 47 0.188 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 16 0.179 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1420 3.919 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2275 5.715 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 968 9.153 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 900 11.428 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.68 _refine_ls_shell.d_res_low 1.723 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.820 _refine_ls_shell.number_reflns_R_work 2385 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.202 _refine_ls_shell.R_factor_R_free 0.275 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 120 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2505 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2RI6 _struct.title 'Crystal Structure of S112A mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RI6 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE, C-C bond hydrolase, Aromatic hydrocarbons catabolism' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 2 ? THR A 6 ? THR A 5 THR A 9 1 ? 5 HELX_P HELX_P2 2 GLY A 44 ? TYR A 50 ? GLY A 47 TYR A 53 1 ? 7 HELX_P HELX_P3 3 ASN A 52 ? ALA A 59 ? ASN A 55 ALA A 62 1 ? 8 HELX_P HELX_P4 4 GLN A 82 ? LEU A 98 ? GLN A 85 LEU A 101 1 ? 17 HELX_P HELX_P5 5 ALA A 109 ? TYR A 122 ? ALA A 112 TYR A 125 1 ? 14 HELX_P HELX_P6 6 MET A 147 ? GLU A 159 ? MET A 150 GLU A 162 1 ? 13 HELX_P HELX_P7 7 SER A 161 ? LEU A 173 ? SER A 164 LEU A 176 1 ? 13 HELX_P HELX_P8 8 ASP A 175 ? ILE A 179 ? ASP A 178 ILE A 182 5 ? 5 HELX_P HELX_P9 9 THR A 180 ? GLN A 194 ? THR A 183 GLN A 197 1 ? 15 HELX_P HELX_P10 10 GLN A 194 ? ALA A 208 ? GLN A 197 ALA A 211 1 ? 15 HELX_P HELX_P11 11 PRO A 209 ? TRP A 213 ? PRO A 212 TRP A 216 5 ? 5 HELX_P HELX_P12 12 VAL A 215 ? ILE A 222 ? VAL A 218 ILE A 225 5 ? 8 HELX_P HELX_P13 13 LEU A 239 ? ILE A 249 ? LEU A 242 ILE A 252 1 ? 11 HELX_P HELX_P14 14 TRP A 263 ? HIS A 268 ? TRP A 266 HIS A 271 1 ? 6 HELX_P HELX_P15 15 HIS A 268 ? ALA A 283 ? HIS A 271 ALA A 286 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id MET _struct_mon_prot_cis.label_seq_id 145 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id MET _struct_mon_prot_cis.auth_seq_id 148 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 146 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 149 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.69 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 7 ? GLU A 14 ? SER A 10 GLU A 17 A 2 PHE A 17 ? ALA A 27 ? PHE A 20 ALA A 30 A 3 ARG A 62 ? LYS A 66 ? ARG A 65 LYS A 69 A 4 THR A 32 ? LEU A 36 ? THR A 35 LEU A 39 A 5 ALA A 103 ? ASN A 108 ? ALA A 106 ASN A 111 A 6 ILE A 126 ? MET A 132 ? ILE A 129 MET A 135 A 7 THR A 226 ? GLY A 231 ? THR A 229 GLY A 234 A 8 ALA A 252 ? PHE A 257 ? ALA A 255 PHE A 260 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 14 ? N GLU A 17 O PHE A 17 ? O PHE A 20 A 2 3 N ASN A 25 ? N ASN A 28 O LEU A 65 ? O LEU A 68 A 3 4 O ARG A 62 ? O ARG A 65 N VAL A 33 ? N VAL A 36 A 4 5 N LEU A 36 ? N LEU A 39 O VAL A 106 ? O VAL A 109 A 5 6 N LEU A 105 ? N LEU A 108 O ILE A 130 ? O ILE A 133 A 6 7 N LEU A 131 ? N LEU A 134 O THR A 229 ? O THR A 232 A 7 8 N ILE A 228 ? N ILE A 231 O ARG A 253 ? O ARG A 256 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 1 ? 2 'BINDING SITE FOR RESIDUE NA A 1' AC2 Software A MLI 287 ? 11 'BINDING SITE FOR RESIDUE MLI A 287' AC3 Software A MLI 2 ? 10 'BINDING SITE FOR RESIDUE MLI A 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 GLU A 31 ? GLU A 34 . ? 4_454 ? 2 AC1 2 HOH E . ? HOH A 335 . ? 1_555 ? 3 AC2 11 GLU A 31 ? GLU A 34 . ? 4_454 ? 4 AC2 11 THR A 32 ? THR A 35 . ? 4_454 ? 5 AC2 11 ARG A 62 ? ARG A 65 . ? 4_454 ? 6 AC2 11 ILE A 100 ? ILE A 103 . ? 4_454 ? 7 AC2 11 ASP A 101 ? ASP A 104 . ? 4_454 ? 8 AC2 11 ARG A 102 ? ARG A 105 . ? 4_454 ? 9 AC2 11 SER A 177 ? SER A 180 . ? 1_555 ? 10 AC2 11 ILE A 179 ? ILE A 182 . ? 1_555 ? 11 AC2 11 HOH E . ? HOH A 290 . ? 1_555 ? 12 AC2 11 HOH E . ? HOH A 332 . ? 1_555 ? 13 AC2 11 HOH E . ? HOH A 381 . ? 1_555 ? 14 AC3 10 GLY A 38 ? GLY A 41 . ? 1_555 ? 15 AC3 10 GLY A 39 ? GLY A 42 . ? 1_555 ? 16 AC3 10 GLY A 40 ? GLY A 43 . ? 1_555 ? 17 AC3 10 ALA A 109 ? ALA A 112 . ? 1_555 ? 18 AC3 10 MET A 110 ? MET A 113 . ? 1_555 ? 19 AC3 10 LEU A 153 ? LEU A 156 . ? 1_555 ? 20 AC3 10 PHE A 172 ? PHE A 175 . ? 1_555 ? 21 AC3 10 HIS A 262 ? HIS A 265 . ? 1_555 ? 22 AC3 10 HOH E . ? HOH A 311 . ? 1_555 ? 23 AC3 10 HOH E . ? HOH A 431 . ? 1_555 ? # _atom_sites.entry_id 2RI6 _atom_sites.fract_transf_matrix[1][1] 0.008526 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008526 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011454 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 4 4 LEU LEU A . n A 1 2 THR 2 5 5 THR THR A . n A 1 3 GLU 3 6 6 GLU GLU A . n A 1 4 SER 4 7 7 SER SER A . n A 1 5 SER 5 8 8 SER SER A . n A 1 6 THR 6 9 9 THR THR A . n A 1 7 SER 7 10 10 SER SER A . n A 1 8 LYS 8 11 11 LYS LYS A . n A 1 9 PHE 9 12 12 PHE PHE A . n A 1 10 VAL 10 13 13 VAL VAL A . n A 1 11 LYS 11 14 14 LYS LYS A . n A 1 12 ILE 12 15 15 ILE ILE A . n A 1 13 ASN 13 16 16 ASN ASN A . n A 1 14 GLU 14 17 17 GLU GLU A . n A 1 15 LYS 15 18 18 LYS LYS A . n A 1 16 GLY 16 19 19 GLY GLY A . n A 1 17 PHE 17 20 20 PHE PHE A . n A 1 18 SER 18 21 21 SER SER A . n A 1 19 ASP 19 22 22 ASP ASP A . n A 1 20 PHE 20 23 23 PHE PHE A . n A 1 21 ASN 21 24 24 ASN ASN A . n A 1 22 ILE 22 25 25 ILE ILE A . n A 1 23 HIS 23 26 26 HIS HIS A . n A 1 24 TYR 24 27 27 TYR TYR A . n A 1 25 ASN 25 28 28 ASN ASN A . n A 1 26 GLU 26 29 29 GLU GLU A . n A 1 27 ALA 27 30 30 ALA ALA A . n A 1 28 GLY 28 31 31 GLY GLY A . n A 1 29 ASN 29 32 32 ASN ASN A . n A 1 30 GLY 30 33 33 GLY GLY A . n A 1 31 GLU 31 34 34 GLU GLU A . n A 1 32 THR 32 35 35 THR THR A . n A 1 33 VAL 33 36 36 VAL VAL A . n A 1 34 ILE 34 37 37 ILE ILE A . n A 1 35 MET 35 38 38 MET MET A . n A 1 36 LEU 36 39 39 LEU LEU A . n A 1 37 HIS 37 40 40 HIS HIS A . n A 1 38 GLY 38 41 41 GLY GLY A . n A 1 39 GLY 39 42 42 GLY GLY A . n A 1 40 GLY 40 43 43 GLY GLY A . n A 1 41 PRO 41 44 44 PRO PRO A . n A 1 42 GLY 42 45 45 GLY GLY A . n A 1 43 ALA 43 46 46 ALA ALA A . n A 1 44 GLY 44 47 47 GLY GLY A . n A 1 45 GLY 45 48 48 GLY GLY A . n A 1 46 TRP 46 49 49 TRP TRP A . n A 1 47 SER 47 50 50 SER SER A . n A 1 48 ASN 48 51 51 ASN ASN A . n A 1 49 TYR 49 52 52 TYR TYR A . n A 1 50 TYR 50 53 53 TYR TYR A . n A 1 51 ARG 51 54 54 ARG ARG A . n A 1 52 ASN 52 55 55 ASN ASN A . n A 1 53 VAL 53 56 56 VAL VAL A . n A 1 54 GLY 54 57 57 GLY GLY A . n A 1 55 PRO 55 58 58 PRO PRO A . n A 1 56 PHE 56 59 59 PHE PHE A . n A 1 57 VAL 57 60 60 VAL VAL A . n A 1 58 ASP 58 61 61 ASP ASP A . n A 1 59 ALA 59 62 62 ALA ALA A . n A 1 60 GLY 60 63 63 GLY GLY A . n A 1 61 TYR 61 64 64 TYR TYR A . n A 1 62 ARG 62 65 65 ARG ARG A . n A 1 63 VAL 63 66 66 VAL VAL A . n A 1 64 ILE 64 67 67 ILE ILE A . n A 1 65 LEU 65 68 68 LEU LEU A . n A 1 66 LYS 66 69 69 LYS LYS A . n A 1 67 ASP 67 70 70 ASP ASP A . n A 1 68 SER 68 71 71 SER SER A . n A 1 69 PRO 69 72 72 PRO PRO A . n A 1 70 GLY 70 73 73 GLY GLY A . n A 1 71 PHE 71 74 74 PHE PHE A . n A 1 72 ASN 72 75 75 ASN ASN A . n A 1 73 LYS 73 76 76 LYS LYS A . n A 1 74 SER 74 77 77 SER SER A . n A 1 75 ASP 75 78 78 ASP ASP A . n A 1 76 ALA 76 79 79 ALA ALA A . n A 1 77 VAL 77 80 80 VAL VAL A . n A 1 78 VAL 78 81 81 VAL VAL A . n A 1 79 MET 79 82 82 MET MET A . n A 1 80 ASP 80 83 83 ASP ASP A . n A 1 81 GLU 81 84 84 GLU GLU A . n A 1 82 GLN 82 85 85 GLN GLN A . n A 1 83 ARG 83 86 86 ARG ARG A . n A 1 84 GLY 84 87 87 GLY GLY A . n A 1 85 LEU 85 88 88 LEU LEU A . n A 1 86 VAL 86 89 89 VAL VAL A . n A 1 87 ASN 87 90 90 ASN ASN A . n A 1 88 ALA 88 91 91 ALA ALA A . n A 1 89 ARG 89 92 92 ARG ARG A . n A 1 90 ALA 90 93 93 ALA ALA A . n A 1 91 VAL 91 94 94 VAL VAL A . n A 1 92 LYS 92 95 95 LYS LYS A . n A 1 93 GLY 93 96 96 GLY GLY A . n A 1 94 LEU 94 97 97 LEU LEU A . n A 1 95 MET 95 98 98 MET MET A . n A 1 96 ASP 96 99 99 ASP ASP A . n A 1 97 ALA 97 100 100 ALA ALA A . n A 1 98 LEU 98 101 101 LEU LEU A . n A 1 99 ASP 99 102 102 ASP ASP A . n A 1 100 ILE 100 103 103 ILE ILE A . n A 1 101 ASP 101 104 104 ASP ASP A . n A 1 102 ARG 102 105 105 ARG ARG A . n A 1 103 ALA 103 106 106 ALA ALA A . n A 1 104 HIS 104 107 107 HIS HIS A . n A 1 105 LEU 105 108 108 LEU LEU A . n A 1 106 VAL 106 109 109 VAL VAL A . n A 1 107 GLY 107 110 110 GLY GLY A . n A 1 108 ASN 108 111 111 ASN ASN A . n A 1 109 ALA 109 112 112 ALA ALA A . n A 1 110 MET 110 113 113 MET MET A . n A 1 111 GLY 111 114 114 GLY GLY A . n A 1 112 GLY 112 115 115 GLY GLY A . n A 1 113 ALA 113 116 116 ALA ALA A . n A 1 114 THR 114 117 117 THR THR A . n A 1 115 ALA 115 118 118 ALA ALA A . n A 1 116 LEU 116 119 119 LEU LEU A . n A 1 117 ASN 117 120 120 ASN ASN A . n A 1 118 PHE 118 121 121 PHE PHE A . n A 1 119 ALA 119 122 122 ALA ALA A . n A 1 120 LEU 120 123 123 LEU LEU A . n A 1 121 GLU 121 124 124 GLU GLU A . n A 1 122 TYR 122 125 125 TYR TYR A . n A 1 123 PRO 123 126 126 PRO PRO A . n A 1 124 ASP 124 127 127 ASP ASP A . n A 1 125 ARG 125 128 128 ARG ARG A . n A 1 126 ILE 126 129 129 ILE ILE A . n A 1 127 GLY 127 130 130 GLY GLY A . n A 1 128 LYS 128 131 131 LYS LYS A . n A 1 129 LEU 129 132 132 LEU LEU A . n A 1 130 ILE 130 133 133 ILE ILE A . n A 1 131 LEU 131 134 134 LEU LEU A . n A 1 132 MET 132 135 135 MET MET A . n A 1 133 GLY 133 136 136 GLY GLY A . n A 1 134 PRO 134 137 137 PRO PRO A . n A 1 135 GLY 135 138 138 GLY GLY A . n A 1 136 GLY 136 139 139 GLY GLY A . n A 1 137 LEU 137 140 140 LEU LEU A . n A 1 138 GLY 138 141 141 GLY GLY A . n A 1 139 PRO 139 142 142 PRO PRO A . n A 1 140 SER 140 143 143 SER SER A . n A 1 141 MET 141 144 144 MET MET A . n A 1 142 PHE 142 145 145 PHE PHE A . n A 1 143 ALA 143 146 146 ALA ALA A . n A 1 144 PRO 144 147 147 PRO PRO A . n A 1 145 MET 145 148 148 MET MET A . n A 1 146 PRO 146 149 149 PRO PRO A . n A 1 147 MET 147 150 150 MET MET A . n A 1 148 GLU 148 151 151 GLU GLU A . n A 1 149 GLY 149 152 152 GLY GLY A . n A 1 150 ILE 150 153 153 ILE ILE A . n A 1 151 LYS 151 154 154 LYS LYS A . n A 1 152 LEU 152 155 155 LEU LEU A . n A 1 153 LEU 153 156 156 LEU LEU A . n A 1 154 PHE 154 157 157 PHE PHE A . n A 1 155 LYS 155 158 158 LYS LYS A . n A 1 156 LEU 156 159 159 LEU LEU A . n A 1 157 TYR 157 160 160 TYR TYR A . n A 1 158 ALA 158 161 161 ALA ALA A . n A 1 159 GLU 159 162 162 GLU GLU A . n A 1 160 PRO 160 163 163 PRO PRO A . n A 1 161 SER 161 164 164 SER SER A . n A 1 162 TYR 162 165 165 TYR TYR A . n A 1 163 GLU 163 166 166 GLU GLU A . n A 1 164 THR 164 167 167 THR THR A . n A 1 165 LEU 165 168 168 LEU LEU A . n A 1 166 LYS 166 169 169 LYS LYS A . n A 1 167 GLN 167 170 170 GLN GLN A . n A 1 168 MET 168 171 171 MET MET A . n A 1 169 LEU 169 172 172 LEU LEU A . n A 1 170 GLN 170 173 173 GLN GLN A . n A 1 171 VAL 171 174 174 VAL VAL A . n A 1 172 PHE 172 175 175 PHE PHE A . n A 1 173 LEU 173 176 176 LEU LEU A . n A 1 174 TYR 174 177 177 TYR TYR A . n A 1 175 ASP 175 178 178 ASP ASP A . n A 1 176 GLN 176 179 179 GLN GLN A . n A 1 177 SER 177 180 180 SER SER A . n A 1 178 LEU 178 181 181 LEU LEU A . n A 1 179 ILE 179 182 182 ILE ILE A . n A 1 180 THR 180 183 183 THR THR A . n A 1 181 GLU 181 184 184 GLU GLU A . n A 1 182 GLU 182 185 185 GLU GLU A . n A 1 183 LEU 183 186 186 LEU LEU A . n A 1 184 LEU 184 187 187 LEU LEU A . n A 1 185 GLN 185 188 188 GLN GLN A . n A 1 186 GLY 186 189 189 GLY GLY A . n A 1 187 ARG 187 190 190 ARG ARG A . n A 1 188 TRP 188 191 191 TRP TRP A . n A 1 189 GLU 189 192 192 GLU GLU A . n A 1 190 ALA 190 193 193 ALA ALA A . n A 1 191 ILE 191 194 194 ILE ILE A . n A 1 192 GLN 192 195 195 GLN GLN A . n A 1 193 ARG 193 196 196 ARG ARG A . n A 1 194 GLN 194 197 197 GLN GLN A . n A 1 195 PRO 195 198 198 PRO PRO A . n A 1 196 GLU 196 199 199 GLU GLU A . n A 1 197 HIS 197 200 200 HIS HIS A . n A 1 198 LEU 198 201 201 LEU LEU A . n A 1 199 LYS 199 202 202 LYS LYS A . n A 1 200 ASN 200 203 203 ASN ASN A . n A 1 201 PHE 201 204 204 PHE PHE A . n A 1 202 LEU 202 205 205 LEU LEU A . n A 1 203 ILE 203 206 206 ILE ILE A . n A 1 204 SER 204 207 207 SER SER A . n A 1 205 ALA 205 208 208 ALA ALA A . n A 1 206 GLN 206 209 209 GLN GLN A . n A 1 207 LYS 207 210 210 LYS LYS A . n A 1 208 ALA 208 211 211 ALA ALA A . n A 1 209 PRO 209 212 212 PRO PRO A . n A 1 210 LEU 210 213 213 LEU LEU A . n A 1 211 SER 211 214 214 SER SER A . n A 1 212 THR 212 215 215 THR THR A . n A 1 213 TRP 213 216 216 TRP TRP A . n A 1 214 ASP 214 217 217 ASP ASP A . n A 1 215 VAL 215 218 218 VAL VAL A . n A 1 216 THR 216 219 219 THR THR A . n A 1 217 ALA 217 220 220 ALA ALA A . n A 1 218 ARG 218 221 221 ARG ARG A . n A 1 219 LEU 219 222 222 LEU LEU A . n A 1 220 GLY 220 223 223 GLY GLY A . n A 1 221 GLU 221 224 224 GLU GLU A . n A 1 222 ILE 222 225 225 ILE ILE A . n A 1 223 LYS 223 226 226 LYS LYS A . n A 1 224 ALA 224 227 227 ALA ALA A . n A 1 225 LYS 225 228 228 LYS LYS A . n A 1 226 THR 226 229 229 THR THR A . n A 1 227 PHE 227 230 230 PHE PHE A . n A 1 228 ILE 228 231 231 ILE ILE A . n A 1 229 THR 229 232 232 THR THR A . n A 1 230 TRP 230 233 233 TRP TRP A . n A 1 231 GLY 231 234 234 GLY GLY A . n A 1 232 ARG 232 235 235 ARG ARG A . n A 1 233 ASP 233 236 236 ASP ASP A . n A 1 234 ASP 234 237 237 ASP ASP A . n A 1 235 ARG 235 238 238 ARG ARG A . n A 1 236 PHE 236 239 239 PHE PHE A . n A 1 237 VAL 237 240 240 VAL VAL A . n A 1 238 PRO 238 241 241 PRO PRO A . n A 1 239 LEU 239 242 242 LEU LEU A . n A 1 240 ASP 240 243 243 ASP ASP A . n A 1 241 HIS 241 244 244 HIS HIS A . n A 1 242 GLY 242 245 245 GLY GLY A . n A 1 243 LEU 243 246 246 LEU LEU A . n A 1 244 LYS 244 247 247 LYS LYS A . n A 1 245 LEU 245 248 248 LEU LEU A . n A 1 246 LEU 246 249 249 LEU LEU A . n A 1 247 TRP 247 250 250 TRP TRP A . n A 1 248 ASN 248 251 251 ASN ASN A . n A 1 249 ILE 249 252 252 ILE ILE A . n A 1 250 ASP 250 253 253 ASP ASP A . n A 1 251 ASP 251 254 254 ASP ASP A . n A 1 252 ALA 252 255 255 ALA ALA A . n A 1 253 ARG 253 256 256 ARG ARG A . n A 1 254 LEU 254 257 257 LEU LEU A . n A 1 255 HIS 255 258 258 HIS HIS A . n A 1 256 VAL 256 259 259 VAL VAL A . n A 1 257 PHE 257 260 260 PHE PHE A . n A 1 258 SER 258 261 261 SER SER A . n A 1 259 LYS 259 262 262 LYS LYS A . n A 1 260 CYS 260 263 263 CYS CYS A . n A 1 261 GLY 261 264 264 GLY GLY A . n A 1 262 HIS 262 265 265 HIS HIS A . n A 1 263 TRP 263 266 266 TRP TRP A . n A 1 264 ALA 264 267 267 ALA ALA A . n A 1 265 GLN 265 268 268 GLN GLN A . n A 1 266 TRP 266 269 269 TRP TRP A . n A 1 267 GLU 267 270 270 GLU GLU A . n A 1 268 HIS 268 271 271 HIS HIS A . n A 1 269 ALA 269 272 272 ALA ALA A . n A 1 270 ASP 270 273 273 ASP ASP A . n A 1 271 GLU 271 274 274 GLU GLU A . n A 1 272 PHE 272 275 275 PHE PHE A . n A 1 273 ASN 273 276 276 ASN ASN A . n A 1 274 ARG 274 277 277 ARG ARG A . n A 1 275 LEU 275 278 278 LEU LEU A . n A 1 276 VAL 276 279 279 VAL VAL A . n A 1 277 ILE 277 280 280 ILE ILE A . n A 1 278 ASP 278 281 281 ASP ASP A . n A 1 279 PHE 279 282 282 PHE PHE A . n A 1 280 LEU 280 283 283 LEU LEU A . n A 1 281 ARG 281 284 284 ARG ARG A . n A 1 282 HIS 282 285 285 HIS HIS A . n A 1 283 ALA 283 286 286 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 1 1 NA NA A . C 3 MLI 1 287 1 MLI MLI A . D 3 MLI 1 2 2 MLI MLI A . E 4 HOH 1 288 1 HOH HOH A . E 4 HOH 2 289 2 HOH HOH A . E 4 HOH 3 290 3 HOH HOH A . E 4 HOH 4 291 4 HOH HOH A . E 4 HOH 5 292 5 HOH HOH A . E 4 HOH 6 293 6 HOH HOH A . E 4 HOH 7 294 7 HOH HOH A . E 4 HOH 8 295 8 HOH HOH A . E 4 HOH 9 296 9 HOH HOH A . E 4 HOH 10 297 10 HOH HOH A . E 4 HOH 11 298 11 HOH HOH A . E 4 HOH 12 299 12 HOH HOH A . E 4 HOH 13 300 13 HOH HOH A . E 4 HOH 14 301 14 HOH HOH A . E 4 HOH 15 302 15 HOH HOH A . E 4 HOH 16 303 16 HOH HOH A . E 4 HOH 17 304 17 HOH HOH A . E 4 HOH 18 305 18 HOH HOH A . E 4 HOH 19 306 19 HOH HOH A . E 4 HOH 20 307 20 HOH HOH A . E 4 HOH 21 308 21 HOH HOH A . E 4 HOH 22 309 22 HOH HOH A . E 4 HOH 23 310 23 HOH HOH A . E 4 HOH 24 311 24 HOH HOH A . E 4 HOH 25 312 25 HOH HOH A . E 4 HOH 26 313 26 HOH HOH A . E 4 HOH 27 314 27 HOH HOH A . E 4 HOH 28 315 28 HOH HOH A . E 4 HOH 29 316 29 HOH HOH A . E 4 HOH 30 317 30 HOH HOH A . E 4 HOH 31 318 31 HOH HOH A . E 4 HOH 32 319 32 HOH HOH A . E 4 HOH 33 320 33 HOH HOH A . E 4 HOH 34 321 34 HOH HOH A . E 4 HOH 35 322 35 HOH HOH A . E 4 HOH 36 323 36 HOH HOH A . E 4 HOH 37 324 37 HOH HOH A . E 4 HOH 38 325 38 HOH HOH A . E 4 HOH 39 326 39 HOH HOH A . E 4 HOH 40 327 40 HOH HOH A . E 4 HOH 41 328 41 HOH HOH A . E 4 HOH 42 329 42 HOH HOH A . E 4 HOH 43 330 43 HOH HOH A . E 4 HOH 44 331 44 HOH HOH A . E 4 HOH 45 332 45 HOH HOH A . E 4 HOH 46 333 46 HOH HOH A . E 4 HOH 47 334 47 HOH HOH A . E 4 HOH 48 335 48 HOH HOH A . E 4 HOH 49 336 49 HOH HOH A . E 4 HOH 50 337 50 HOH HOH A . E 4 HOH 51 338 51 HOH HOH A . E 4 HOH 52 339 52 HOH HOH A . E 4 HOH 53 340 53 HOH HOH A . E 4 HOH 54 341 54 HOH HOH A . E 4 HOH 55 342 55 HOH HOH A . E 4 HOH 56 343 56 HOH HOH A . E 4 HOH 57 344 57 HOH HOH A . E 4 HOH 58 345 58 HOH HOH A . E 4 HOH 59 346 59 HOH HOH A . E 4 HOH 60 347 60 HOH HOH A . E 4 HOH 61 348 61 HOH HOH A . E 4 HOH 62 349 62 HOH HOH A . E 4 HOH 63 350 63 HOH HOH A . E 4 HOH 64 351 64 HOH HOH A . E 4 HOH 65 352 65 HOH HOH A . E 4 HOH 66 353 66 HOH HOH A . E 4 HOH 67 354 67 HOH HOH A . E 4 HOH 68 355 68 HOH HOH A . E 4 HOH 69 356 69 HOH HOH A . E 4 HOH 70 357 70 HOH HOH A . E 4 HOH 71 358 71 HOH HOH A . E 4 HOH 72 359 72 HOH HOH A . E 4 HOH 73 360 73 HOH HOH A . E 4 HOH 74 361 74 HOH HOH A . E 4 HOH 75 362 75 HOH HOH A . E 4 HOH 76 363 76 HOH HOH A . E 4 HOH 77 364 77 HOH HOH A . E 4 HOH 78 365 78 HOH HOH A . E 4 HOH 79 366 79 HOH HOH A . E 4 HOH 80 367 80 HOH HOH A . E 4 HOH 81 368 81 HOH HOH A . E 4 HOH 82 369 82 HOH HOH A . E 4 HOH 83 370 83 HOH HOH A . E 4 HOH 84 371 84 HOH HOH A . E 4 HOH 85 372 85 HOH HOH A . E 4 HOH 86 373 86 HOH HOH A . E 4 HOH 87 374 87 HOH HOH A . E 4 HOH 88 375 88 HOH HOH A . E 4 HOH 89 376 89 HOH HOH A . E 4 HOH 90 377 90 HOH HOH A . E 4 HOH 91 378 91 HOH HOH A . E 4 HOH 92 379 92 HOH HOH A . E 4 HOH 93 380 93 HOH HOH A . E 4 HOH 94 381 94 HOH HOH A . E 4 HOH 95 382 95 HOH HOH A . E 4 HOH 96 383 96 HOH HOH A . E 4 HOH 97 384 97 HOH HOH A . E 4 HOH 98 385 98 HOH HOH A . E 4 HOH 99 386 99 HOH HOH A . E 4 HOH 100 387 100 HOH HOH A . E 4 HOH 101 388 101 HOH HOH A . E 4 HOH 102 389 102 HOH HOH A . E 4 HOH 103 390 103 HOH HOH A . E 4 HOH 104 391 104 HOH HOH A . E 4 HOH 105 392 105 HOH HOH A . E 4 HOH 106 393 106 HOH HOH A . E 4 HOH 107 394 107 HOH HOH A . E 4 HOH 108 395 108 HOH HOH A . E 4 HOH 109 396 109 HOH HOH A . E 4 HOH 110 397 110 HOH HOH A . E 4 HOH 111 398 111 HOH HOH A . E 4 HOH 112 399 112 HOH HOH A . E 4 HOH 113 400 113 HOH HOH A . E 4 HOH 114 401 114 HOH HOH A . E 4 HOH 115 402 115 HOH HOH A . E 4 HOH 116 403 116 HOH HOH A . E 4 HOH 117 404 117 HOH HOH A . E 4 HOH 118 405 118 HOH HOH A . E 4 HOH 119 406 119 HOH HOH A . E 4 HOH 120 407 120 HOH HOH A . E 4 HOH 121 408 121 HOH HOH A . E 4 HOH 122 409 122 HOH HOH A . E 4 HOH 123 410 123 HOH HOH A . E 4 HOH 124 411 124 HOH HOH A . E 4 HOH 125 412 125 HOH HOH A . E 4 HOH 126 413 126 HOH HOH A . E 4 HOH 127 414 127 HOH HOH A . E 4 HOH 128 415 128 HOH HOH A . E 4 HOH 129 416 129 HOH HOH A . E 4 HOH 130 417 130 HOH HOH A . E 4 HOH 131 418 131 HOH HOH A . E 4 HOH 132 419 132 HOH HOH A . E 4 HOH 133 420 133 HOH HOH A . E 4 HOH 134 421 134 HOH HOH A . E 4 HOH 135 422 135 HOH HOH A . E 4 HOH 136 423 136 HOH HOH A . E 4 HOH 137 424 137 HOH HOH A . E 4 HOH 138 425 138 HOH HOH A . E 4 HOH 139 426 139 HOH HOH A . E 4 HOH 140 427 140 HOH HOH A . E 4 HOH 141 428 141 HOH HOH A . E 4 HOH 142 429 142 HOH HOH A . E 4 HOH 143 430 143 HOH HOH A . E 4 HOH 144 431 144 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 10810 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 -y,-x,-z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 10_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 15_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-11-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 3 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 4 MOLREP . ? ? ? ? phasing ? ? ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 18 ? ? -1.70 94.88 2 1 ASN A 75 ? ? 48.13 -123.62 3 1 ALA A 112 ? ? 62.58 -117.40 4 1 LEU A 140 ? ? -76.86 34.45 5 1 PHE A 145 ? ? -130.14 -36.15 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 'MALONATE ION' MLI 4 water HOH #