HEADER TRANSFERASE 17-OCT-07 2RKT TITLE CRYSTAL STRUCTURE OF APO F. GRAMINEARUM TRI101 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRICHOTHECENE 3-O-ACETYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GIBBERELLA ZEAE; SOURCE 3 ORGANISM_TAXID: 5518; SOURCE 4 STRAIN: PH-1; SOURCE 5 GENE: TRI101; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET31B KEYWDS ACETYLTRANSFERASE, BAHD SUPERFAMILY, TRICHOTHECENE, DEOXYNIVALENOL, KEYWDS 2 T-2, ACETYL COA, FUSARIUM, TRI101, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.S.GARVEY,I.RAYMENT REVDAT 6 15-NOV-23 2RKT 1 REMARK REVDAT 5 30-AUG-23 2RKT 1 SEQADV LINK REVDAT 4 21-DEC-16 2RKT 1 TITLE VERSN REVDAT 3 24-FEB-09 2RKT 1 VERSN REVDAT 2 29-JAN-08 2RKT 1 JRNL REVDAT 1 11-DEC-07 2RKT 0 JRNL AUTH G.S.GARVEY,S.P.MCCORMICK,I.RAYMENT JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THE TRI101 JRNL TITL 2 TRICHOTHECENE 3-O-ACETYLTRANSFERASE FROM FUSARIUM JRNL TITL 3 SPOROTRICHIOIDES AND FUSARIUM GRAMINEARUM: KINETIC INSIGHTS JRNL TITL 4 TO COMBATING FUSARIUM HEAD BLIGHT JRNL REF J.BIOL.CHEM. V. 283 1660 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 17923480 JRNL DOI 10.1074/JBC.M705752200 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 35009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1838 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2502 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 127 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3299 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 347 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.58000 REMARK 3 B22 (A**2) : -0.58000 REMARK 3 B33 (A**2) : 1.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.160 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.116 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.125 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3396 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4618 ; 1.656 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 438 ; 8.161 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 139 ;37.550 ;23.741 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 540 ;14.462 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;19.492 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 516 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2593 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1721 ; 0.208 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2319 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 307 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 46 ; 0.234 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.151 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2242 ; 0.914 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3514 ; 1.403 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1322 ; 2.205 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1101 ; 3.058 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RKT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000044980. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97907 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36684 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.53000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.920 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2ZBA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.1M SODIUM MALONATE, 100 MM 3-N REMARK 280 -MORPHOLINO PROPANESULFONIC ACID, PH 6.9, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 57.10450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 57.10450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 57.10450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 57.10450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 57.10450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.10450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 57.10450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.10450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 16 REMARK 465 LEU A 17 REMARK 465 SER A 18 REMARK 465 ASP A 221 REMARK 465 ALA A 222 REMARK 465 VAL A 223 REMARK 465 LEU A 224 REMARK 465 THR A 225 REMARK 465 ASP A 253 REMARK 465 ALA A 254 REMARK 465 SER A 255 REMARK 465 THR A 256 REMARK 465 LYS A 257 REMARK 465 GLU A 337 REMARK 465 LEU A 338 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 19 CG1 CG2 CD1 REMARK 470 LYS A 61 CE NZ REMARK 470 GLU A 67 CG CD OE1 OE2 REMARK 470 LYS A 87 CD CE NZ REMARK 470 LYS A 103 CD CE NZ REMARK 470 ASP A 131 CB CG OD1 OD2 REMARK 470 LYS A 134 CE NZ REMARK 470 LYS A 173 CE NZ REMARK 470 GLU A 182 CD OE1 OE2 REMARK 470 GLU A 200 CG CD OE1 OE2 REMARK 470 LYS A 214 CE NZ REMARK 470 GLY A 220 O REMARK 470 VAL A 227 CB CG1 CG2 REMARK 470 LYS A 239 CE NZ REMARK 470 LYS A 250 CG CD CE NZ REMARK 470 ILE A 281 CG2 CD1 REMARK 470 ASP A 282 OD1 OD2 REMARK 470 GLU A 321 CG CD OE1 OE2 REMARK 470 SER A 336 C O CB OG REMARK 470 ASP A 339 N REMARK 470 ARG A 344 CZ NH1 NH2 REMARK 470 LYS A 382 CG CD CE NZ REMARK 470 LYS A 441 CG CD CE NZ REMARK 470 GLN A 448 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 262 O HOH A 789 2.06 REMARK 500 O HOH A 589 O HOH A 730 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MSE A 343 SE MSE A 343 CE -0.385 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 8 137.61 -39.78 REMARK 500 PRO A 14 -3.77 -45.26 REMARK 500 PHE A 78 -81.30 -139.51 REMARK 500 PHE A 111 62.94 -114.56 REMARK 500 ILE A 204 125.83 -176.49 REMARK 500 ASP A 263 -87.73 23.75 REMARK 500 PHE A 405 -159.76 -143.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 262 ASP A 263 110.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ZBA RELATED DB: PDB REMARK 900 RELATED ID: 2RKV RELATED DB: PDB REMARK 900 RELATED ID: 3B2S RELATED DB: PDB REMARK 900 RELATED ID: 3B30 RELATED DB: PDB DBREF 2RKT A 1 444 UNP Q9HDE2 Q9HDE2_GIBZE 1 444 SEQADV 2RKT SER A 0 UNP O42692 EXPRESSION TAG SEQADV 2RKT LYS A 445 UNP Q9HDE2 INSERTION SEQADV 2RKT TYR A 446 UNP Q9HDE2 INSERTION SEQADV 2RKT ALA A 447 UNP Q9HDE2 INSERTION SEQADV 2RKT GLN A 448 UNP Q9HDE2 INSERTION SEQADV 2RKT TYR A 449 UNP Q9HDE2 INSERTION SEQADV 2RKT VAL A 450 UNP Q9HDE2 INSERTION SEQADV 2RKT GLY A 451 UNP Q9HDE2 INSERTION SEQRES 1 A 452 SER MSE ALA PHE LYS ILE GLN LEU ASP THR LEU GLY GLN SEQRES 2 A 452 LEU PRO GLY LEU LEU SER ILE TYR THR GLN ILE SER LEU SEQRES 3 A 452 LEU TYR PRO VAL SER ASP SER SER GLN TYR PRO THR ILE SEQRES 4 A 452 VAL SER THR PHE GLU GLN GLY LEU LYS ARG PHE SER GLU SEQRES 5 A 452 ALA VAL PRO TRP VAL ALA GLY GLN VAL LYS ALA GLU GLY SEQRES 6 A 452 ILE SER GLU GLY ASN THR GLY THR SER PHE ILE VAL PRO SEQRES 7 A 452 PHE GLU ASP VAL PRO ARG VAL VAL VAL LYS ASP LEU ARG SEQRES 8 A 452 ASP ASP PRO SER ALA PRO THR ILE GLU GLY MSE ARG LYS SEQRES 9 A 452 ALA GLY TYR PRO MSE ALA MSE PHE ASP GLU ASN ILE ILE SEQRES 10 A 452 ALA PRO ARG LYS THR LEU PRO ILE GLY PRO GLY THR GLY SEQRES 11 A 452 PRO ASP ASP PRO LYS PRO VAL ILE LEU LEU GLN LEU ASN SEQRES 12 A 452 PHE ILE LYS GLY GLY LEU ILE LEU THR VAL ASN GLY GLN SEQRES 13 A 452 HIS GLY ALA MSE ASP MSE VAL GLY GLN ASP ALA VAL ILE SEQRES 14 A 452 ARG LEU LEU SER LYS ALA CYS ARG ASN ASP PRO PHE THR SEQRES 15 A 452 GLU GLU GLU MSE THR ALA MSE ASN LEU ASP ARG LYS THR SEQRES 16 A 452 ILE VAL PRO TYR LEU GLU ASN TYR THR ILE GLY PRO GLU SEQRES 17 A 452 VAL ASP HIS GLN ILE VAL LYS ALA ASP VAL ALA GLY GLY SEQRES 18 A 452 ASP ALA VAL LEU THR PRO VAL SER ALA SER TRP ALA PHE SEQRES 19 A 452 PHE THR PHE SER PRO LYS ALA MSE SER GLU LEU LYS ASP SEQRES 20 A 452 ALA ALA THR LYS THR LEU ASP ALA SER THR LYS PHE VAL SEQRES 21 A 452 SER THR ASP ASP ALA LEU SER ALA PHE ILE TRP LYS SER SEQRES 22 A 452 ALA SER ARG VAL ARG LEU GLU ARG ILE ASP GLY SER ALA SEQRES 23 A 452 PRO THR GLU PHE CYS ARG ALA VAL ASP ALA ARG PRO ALA SEQRES 24 A 452 MSE GLY VAL SER ASN ASN TYR PRO GLY LEU LEU GLN ASN SEQRES 25 A 452 MSE THR TYR HIS ASN SER THR ILE GLY GLU ILE ALA ASN SEQRES 26 A 452 GLU SER LEU GLY ALA THR ALA SER ARG LEU ARG SER GLU SEQRES 27 A 452 LEU ASP PRO ALA SER MSE ARG GLN ARG THR ARG GLY LEU SEQRES 28 A 452 ALA THR TYR LEU HIS ASN ASN PRO ASP LYS SER ASN VAL SEQRES 29 A 452 SER LEU THR ALA ASP ALA ASP PRO SER THR SER VAL MSE SEQRES 30 A 452 LEU SER SER TRP ALA LYS VAL GLY LEU TRP ASP TYR ASP SEQRES 31 A 452 PHE GLY LEU GLY LEU GLY LYS PRO GLU THR VAL ARG ARG SEQRES 32 A 452 PRO ILE PHE GLU PRO VAL GLU SER LEU MSE TYR PHE MSE SEQRES 33 A 452 PRO LYS LYS PRO ASP GLY GLU PHE CYS ALA ALA LEU SER SEQRES 34 A 452 LEU ARG ASP GLU ASP MSE ASP ARG LEU LYS ALA ASP LYS SEQRES 35 A 452 GLU TRP THR LYS TYR ALA GLN TYR VAL GLY MODRES 2RKT MSE A 1 MET SELENOMETHIONINE MODRES 2RKT MSE A 101 MET SELENOMETHIONINE MODRES 2RKT MSE A 108 MET SELENOMETHIONINE MODRES 2RKT MSE A 110 MET SELENOMETHIONINE MODRES 2RKT MSE A 159 MET SELENOMETHIONINE MODRES 2RKT MSE A 161 MET SELENOMETHIONINE MODRES 2RKT MSE A 185 MET SELENOMETHIONINE MODRES 2RKT MSE A 188 MET SELENOMETHIONINE MODRES 2RKT MSE A 241 MET SELENOMETHIONINE MODRES 2RKT MSE A 299 MET SELENOMETHIONINE MODRES 2RKT MSE A 312 MET SELENOMETHIONINE MODRES 2RKT MSE A 343 MET SELENOMETHIONINE MODRES 2RKT MSE A 376 MET SELENOMETHIONINE MODRES 2RKT MSE A 412 MET SELENOMETHIONINE MODRES 2RKT MSE A 415 MET SELENOMETHIONINE MODRES 2RKT MSE A 434 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 101 8 HET MSE A 108 8 HET MSE A 110 8 HET MSE A 159 8 HET MSE A 161 8 HET MSE A 185 8 HET MSE A 188 8 HET MSE A 241 8 HET MSE A 299 8 HET MSE A 312 8 HET MSE A 343 8 HET MSE A 376 8 HET MSE A 412 13 HET MSE A 415 8 HET MSE A 434 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 2 HOH *347(H2 O) HELIX 1 1 ASP A 8 LEU A 13 5 6 HELIX 2 2 ASP A 31 SER A 33 5 3 HELIX 3 3 GLN A 34 VAL A 53 1 20 HELIX 4 4 PRO A 54 GLY A 58 5 5 HELIX 5 5 THR A 97 ALA A 104 1 8 HELIX 6 6 PRO A 107 PHE A 111 5 5 HELIX 7 7 ASP A 112 ALA A 117 1 6 HELIX 8 8 ASP A 160 ARG A 176 1 17 HELIX 9 9 THR A 181 LEU A 190 1 10 HELIX 10 10 GLY A 205 ASP A 209 5 5 HELIX 11 11 SER A 237 THR A 251 1 15 HELIX 12 12 SER A 260 LEU A 278 1 19 HELIX 13 13 ALA A 295 GLY A 300 1 6 HELIX 14 14 ILE A 319 GLU A 325 1 7 HELIX 15 15 SER A 326 SER A 336 1 11 HELIX 16 16 ASP A 339 ASN A 356 1 18 HELIX 17 17 GLY A 384 TYR A 388 5 5 HELIX 18 18 ASP A 431 ASP A 440 1 10 HELIX 19 19 ASP A 440 LYS A 445 1 6 SHEET 1 A 3 ILE A 5 GLN A 6 0 SHEET 2 A 3 ASN A 69 VAL A 76 -1 O ILE A 75 N ILE A 5 SHEET 3 A 3 GLN A 59 SER A 66 -1 N GLU A 63 O THR A 72 SHEET 1 B 5 VAL A 84 ASP A 88 0 SHEET 2 B 5 ILE A 137 ILE A 144 1 O PHE A 143 N LYS A 87 SHEET 3 B 5 GLY A 147 GLN A 155 -1 O ASN A 153 N LEU A 138 SHEET 4 B 5 TYR A 20 PRO A 28 -1 N LEU A 25 O LEU A 150 SHEET 5 B 5 THR A 399 ARG A 401 -1 O ARG A 401 N SER A 24 SHEET 1 C 7 GLN A 310 THR A 318 0 SHEET 2 C 7 PRO A 286 ASP A 294 -1 N PHE A 289 O HIS A 315 SHEET 3 C 7 VAL A 375 SER A 379 1 O VAL A 375 N CYS A 290 SHEET 4 C 7 LEU A 411 PHE A 414 1 O MSE A 412 N MSE A 376 SHEET 5 C 7 PHE A 423 ARG A 430 -1 O ALA A 426 N TYR A 413 SHEET 6 C 7 ALA A 229 PHE A 236 -1 N ALA A 232 O LEU A 427 SHEET 7 C 7 GLN A 448 GLY A 451 -1 O GLN A 448 N THR A 235 LINK C SER A 0 N MSE A 1 1555 1555 1.34 LINK C MSE A 1 N ALA A 2 1555 1555 1.31 LINK C GLY A 100 N MSE A 101 1555 1555 1.35 LINK C MSE A 101 N ARG A 102 1555 1555 1.33 LINK C PRO A 107 N MSE A 108 1555 1555 1.34 LINK C MSE A 108 N ALA A 109 1555 1555 1.34 LINK C ALA A 109 N MSE A 110 1555 1555 1.33 LINK C MSE A 110 N PHE A 111 1555 1555 1.34 LINK C ALA A 158 N MSE A 159 1555 1555 1.34 LINK C MSE A 159 N ASP A 160 1555 1555 1.32 LINK C ASP A 160 N MSE A 161 1555 1555 1.33 LINK C MSE A 161 N VAL A 162 1555 1555 1.31 LINK C GLU A 184 N MSE A 185 1555 1555 1.34 LINK C MSE A 185 N THR A 186 1555 1555 1.33 LINK C ALA A 187 N MSE A 188 1555 1555 1.35 LINK C MSE A 188 N ASN A 189 1555 1555 1.34 LINK C ALA A 240 N MSE A 241 1555 1555 1.34 LINK C MSE A 241 N SER A 242 1555 1555 1.32 LINK C ALA A 298 N MSE A 299 1555 1555 1.33 LINK C MSE A 299 N GLY A 300 1555 1555 1.32 LINK C ASN A 311 N MSE A 312 1555 1555 1.32 LINK C MSE A 312 N THR A 313 1555 1555 1.31 LINK C SER A 342 N MSE A 343 1555 1555 1.33 LINK C MSE A 343 N ARG A 344 1555 1555 1.34 LINK C VAL A 375 N MSE A 376 1555 1555 1.34 LINK C MSE A 376 N LEU A 377 1555 1555 1.34 LINK C LEU A 411 N MSE A 412 1555 1555 1.33 LINK C MSE A 412 N TYR A 413 1555 1555 1.33 LINK C PHE A 414 N MSE A 415 1555 1555 1.32 LINK C MSE A 415 N PRO A 416 1555 1555 1.36 LINK C ASP A 433 N MSE A 434 1555 1555 1.33 LINK C MSE A 434 N ASP A 435 1555 1555 1.33 CRYST1 114.209 114.209 80.384 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008756 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008756 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012440 0.00000