HEADER SIGNALING PROTEIN 07-NOV-07 2RMO TITLE SOLUTION STRUCTURE OF ALPHA-SPECTRIN_SH3-BERGERAC FROM CHICKEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPECTRIN ALPHA CHAIN, BRAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ALPHA-SPECTRIN SH3 DOMAIN; COMPND 5 SYNONYM: SPECTRIN, NON-ERYTHROID ALPHA CHAIN, FODRIN ALPHA CHAIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: SHA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PBAT-4 KEYWDS SH3, BERGERAC, ACTIN CAPPING, ACTIN-BINDING, CALCIUM, CALMODULIN- KEYWDS 2 BINDING, CYTOPLASM, CYTOSKELETON, MEMBRANE, PHOSPHORYLATION, SH3 KEYWDS 3 DOMAIN, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR V.P.KUTYSHENKO,D.A.PROKHOROV,M.A.TIMCHENKO,Y.A.KUDREVATYKH, AUTHOR 2 D.V.FEDYUKINA,L.V.GUSHCHINA,V.S.KHRISTOFOROV,V.V.FILIMONOV REVDAT 4 16-MAR-22 2RMO 1 REMARK SEQADV REVDAT 3 07-APR-09 2RMO 1 JRNL REVDAT 2 24-FEB-09 2RMO 1 VERSN REVDAT 1 30-SEP-08 2RMO 0 JRNL AUTH D.A.PROKHOROV,M.A.TIMCHENKO,Y.A.KUDREVATYKH,D.V.FEDYUKINA, JRNL AUTH 2 L.V.GUSHCHINA,V.S.KHRISTOFOROV,V.V.FILIMONOV,V.P.KUTYSHENKO JRNL TITL STUDY OF THE STRUCTURE AND DYNAMICS OF A CHIMERIC VARIANT OF JRNL TITL 2 THE SH3 DOMAIN (SHA-BERGERAC) BY NMR SPECTROSCOPY JRNL REF RUSS.J.BIOORGANIC CHEM. V. 34 578 2008 JRNL REFN ISSN 1068-1620 JRNL PMID 19060939 JRNL DOI 10.1134/S1068162008050075 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.-R.VIGUERA,L.SERRANO REMARK 1 TITL BERGERAC-SH3: "FRUSTATION" INDUCED BY STABILIZING THE REMARK 1 TITL 2 FOLDING NUCLEUS REMARK 1 REF J.MOL.BIOL. V. 311 357 2001 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 11478866 REMARK 1 DOI 10.1006/JMBI.2001.4738 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RMO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000150040. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4 REMARK 210 IONIC STRENGTH : 25 REMARK 210 PRESSURE : 74 4 REMARK 210 SAMPLE CONTENTS : 2.5MM [U-98% 13C; U-98% 15N] REMARK 210 ALPHA-SPECTRIN SH3-BERGERAC; 90% REMARK 210 H2O, 10% [U-99% 2H] D2O; 25MM [U- REMARK 210 99% 2H] SODIUM ACETATE; 0.03% REMARK 210 SODIUM AZIDE; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 C(CO)NH; 3D HCCH-TOCSY-ALI; 3D REMARK 210 HCCH-TOCSY-ARO; 3D 1H-15N TOCSY; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY- REMARK 210 ALI; 3D 1H-13C NOESY-ARO; 3D HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING DIHEDRAL ANGLES PHI AND REMARK 210 PSI PREDICTED BY PROGRAM PREDITOR. H-BONDS WERE USED AS THE REMARK 210 ADDITIONAL RESTRAINTS. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 4 95.80 -165.95 REMARK 500 1 LYS A 6 -64.93 -136.43 REMARK 500 2 ASP A 2 71.18 51.97 REMARK 500 2 THR A 4 111.17 -179.09 REMARK 500 2 LYS A 6 -49.39 -135.05 REMARK 500 2 LYS A 27 109.77 -55.92 REMARK 500 2 LEU A 69 52.83 -109.07 REMARK 500 3 ASP A 2 52.01 -119.01 REMARK 500 3 GLU A 7 121.50 179.07 REMARK 500 3 LYS A 27 106.62 -51.76 REMARK 500 4 GLU A 3 39.94 -99.13 REMARK 500 4 GLU A 7 137.21 177.57 REMARK 500 4 LEU A 69 44.55 -91.82 REMARK 500 5 THR A 4 118.00 -178.76 REMARK 500 5 GLU A 7 104.42 177.99 REMARK 500 5 LYS A 27 101.89 -53.24 REMARK 500 6 GLU A 7 126.87 179.70 REMARK 500 6 LYS A 27 99.01 -57.50 REMARK 500 6 LEU A 69 44.31 -92.24 REMARK 500 7 THR A 4 100.39 -164.17 REMARK 500 7 LYS A 6 -46.01 -134.89 REMARK 500 7 GLU A 7 89.20 -179.88 REMARK 500 7 LYS A 27 99.69 -56.71 REMARK 500 7 LEU A 69 53.29 -110.36 REMARK 500 8 ASP A 2 44.56 -103.55 REMARK 500 8 THR A 4 91.86 -166.79 REMARK 500 8 GLU A 7 120.18 178.10 REMARK 500 8 LYS A 27 109.48 -51.46 REMARK 500 9 THR A 4 102.23 -164.38 REMARK 500 9 LYS A 6 -45.97 -132.65 REMARK 500 9 GLU A 7 97.43 -178.87 REMARK 500 9 LEU A 69 44.90 -91.74 REMARK 500 10 ASP A 2 47.48 -105.08 REMARK 500 10 GLU A 7 124.12 179.04 REMARK 500 10 LYS A 27 102.94 -53.25 REMARK 500 11 THR A 4 106.13 -171.68 REMARK 500 11 LYS A 6 -53.95 -130.85 REMARK 500 11 GLU A 7 58.94 -155.89 REMARK 500 11 LYS A 27 105.46 -55.44 REMARK 500 11 LEU A 69 57.40 -118.20 REMARK 500 12 ASP A 2 55.23 -96.22 REMARK 500 12 GLU A 3 56.03 -113.92 REMARK 500 12 THR A 4 125.64 -175.73 REMARK 500 12 LYS A 6 -65.22 -121.26 REMARK 500 13 GLU A 3 -169.73 -71.90 REMARK 500 13 THR A 4 127.07 -175.82 REMARK 500 13 GLU A 7 92.46 -166.92 REMARK 500 13 LYS A 27 108.37 -53.14 REMARK 500 13 LEU A 69 57.24 -117.01 REMARK 500 14 GLU A 3 56.98 -115.18 REMARK 500 REMARK 500 THIS ENTRY HAS 74 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 INSERTION OF BETA SHEET INCLUDING 47-56 RESIDUES REMARK 999 (KATANGKTYE) BETWEEN 46-49 OF SH3-PWT (1SHG) DBREF 2RMO A 2 70 UNP P07751 SPTA2_CHICK 965 1025 SEQADV 2RMO MET A 1 UNP P07751 INITIATING METHIONINE SEQADV 2RMO LYS A 47 UNP P07751 SEE REMARK 999 SEQADV 2RMO ALA A 48 UNP P07751 SEE REMARK 999 SEQADV 2RMO THR A 49 UNP P07751 SEE REMARK 999 SEQADV 2RMO ALA A 50 UNP P07751 SEE REMARK 999 SEQADV 2RMO ASN A 51 UNP P07751 SEE REMARK 999 SEQADV 2RMO GLY A 52 UNP P07751 SEE REMARK 999 SEQADV 2RMO LYS A 53 UNP P07751 SEE REMARK 999 SEQADV 2RMO THR A 54 UNP P07751 SEE REMARK 999 SEQADV 2RMO TYR A 55 UNP P07751 SEE REMARK 999 SEQADV 2RMO GLU A 56 UNP P07751 SEE REMARK 999 SEQRES 1 A 70 MET ASP GLU THR GLY LYS GLU LEU VAL LEU ALA LEU TYR SEQRES 2 A 70 ASP TYR GLN GLU LYS SER PRO ARG GLU VAL THR MET LYS SEQRES 3 A 70 LYS GLY ASP ILE LEU THR LEU LEU ASN SER THR ASN LYS SEQRES 4 A 70 ASP TRP TRP LYS VAL GLU VAL LYS ALA THR ALA ASN GLY SEQRES 5 A 70 LYS THR TYR GLU ARG GLN GLY PHE VAL PRO ALA ALA TYR SEQRES 6 A 70 VAL LYS LYS LEU ASP SHEET 1 A 5 LYS A 53 PRO A 62 0 SHEET 2 A 5 TRP A 41 ALA A 50 -1 N ALA A 48 O TYR A 55 SHEET 3 A 5 ILE A 30 ASN A 35 -1 N ASN A 35 O LYS A 43 SHEET 4 A 5 LEU A 8 ALA A 11 -1 N VAL A 9 O LEU A 31 SHEET 5 A 5 VAL A 66 LYS A 68 -1 O LYS A 67 N LEU A 10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1