HEADER METAL BINDING PROTEIN 20-MAR-08 2ROE TITLE SOLUTION STRUCTURE OF THERMUS THERMOPHILUS HB8 TTHA1718 PROTEIN IN TITLE 2 VITRO COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAVY METAL BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TTHA1718 HEAVY METAL BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET11A KEYWDS PROTEIN, METAL BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.SAKAKIBARA,A.SASAKI,T.IKEYA,J.HAMATSU,H.KOYAMA,M.MISHIMA,T.MIKAWA, AUTHOR 2 M.WAELCHLI,B.O.SMITH,M.SHIRAKAWA,P.GUENTERT,Y.ITO REVDAT 3 16-MAR-22 2ROE 1 REMARK REVDAT 2 07-APR-09 2ROE 1 JRNL REVDAT 1 03-MAR-09 2ROE 0 JRNL AUTH D.SAKAKIBARA,A.SASAKI,T.IKEYA,J.HAMATSU,T.HANASHIMA, JRNL AUTH 2 M.MISHIMA,M.YOSHIMASU,N.HAYASHI,T.MIKAWA,M.WALCHLI, JRNL AUTH 3 B.O.SMITH,M.SHIRAKAWA,P.GUNTERT,Y.ITO JRNL TITL PROTEIN STRUCTURE DETERMINATION IN LIVING CELLS BY IN-CELL JRNL TITL 2 NMR SPECTROSCOPY JRNL REF NATURE V. 458 102 2009 JRNL REFN ISSN 0028-0836 JRNL PMID 19262674 JRNL DOI 10.1038/NATURE07814 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 1.3, CYANA 3.0 REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), GUNTERT, MUMENTHALER AND REMARK 3 WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ROE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000150092. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM [U-13C; U-15N] TTHA1718 REMARK 210 HEAVY METAL BINDING PROTEIN, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D CBCANH; 3D REMARK 210 HNCO; 3D HN(CA)CO; 3D H(CCCO)NH; REMARK 210 3D CC(CO)NH; 3D HCCH-TOCSY; 4D REMARK 210 HCC(CO)NH; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AZARA 2.7, ANSIG, CYANA 3.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 4 LEU A 2 -159.53 -103.74 REMARK 500 4 THR A 10 -41.43 -137.15 REMARK 500 4 GLU A 29 -54.88 -121.49 REMARK 500 5 GLU A 29 -51.90 -124.52 REMARK 500 7 GLU A 29 -62.41 -104.35 REMARK 500 11 THR A 10 -38.04 -136.11 REMARK 500 11 GLU A 29 -53.60 -124.96 REMARK 500 12 GLU A 29 -61.38 -97.29 REMARK 500 13 GLU A 29 -57.90 -120.14 REMARK 500 15 GLU A 29 -64.62 -130.71 REMARK 500 16 GLU A 29 -52.47 -123.17 REMARK 500 17 THR A 10 16.08 -141.04 REMARK 500 18 GLU A 29 -66.13 -131.78 REMARK 500 19 GLU A 29 -57.36 -130.92 REMARK 500 19 LEU A 65 37.60 -98.82 REMARK 500 20 GLU A 29 -54.49 -122.77 REMARK 500 20 LEU A 65 50.87 -106.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 TYR A 60 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ROG RELATED DB: PDB DBREF 2ROE A 1 66 UNP Q5SHL2 Q5SHL2_THET8 1 66 SEQRES 1 A 66 MET LEU LYS LEU LYS VAL GLU GLY MET THR CYS ASN HIS SEQRES 2 A 66 CYS VAL MET ALA VAL THR LYS ALA LEU LYS LYS VAL PRO SEQRES 3 A 66 GLY VAL GLU LYS VAL GLU VAL SER LEU GLU LYS GLY GLU SEQRES 4 A 66 ALA LEU VAL GLU GLY THR ALA ASP PRO LYS ALA LEU VAL SEQRES 5 A 66 GLN ALA VAL GLU GLU GLU GLY TYR LYS ALA GLU VAL LEU SEQRES 6 A 66 ALA HELIX 1 1 CYS A 11 LYS A 24 1 14 HELIX 2 2 ASP A 47 GLU A 57 1 11 SHEET 1 A 2 LEU A 4 GLU A 7 0 SHEET 2 A 2 LYS A 61 VAL A 64 -1 O GLU A 63 N LYS A 5 SHEET 1 B 2 VAL A 31 VAL A 33 0 SHEET 2 B 2 ALA A 40 VAL A 42 -1 O LEU A 41 N GLU A 32 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1