data_2ROL # _entry.id 2ROL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.323 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2ROL RCSB RCSB150099 WWPDB D_1000150099 BMRB 11040 # _pdbx_database_related.db_name BMRB _pdbx_database_related.db_id 11040 _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2ROL _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-04-02 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Aitio, O.' 1 'Hellman, M.' 2 'Kesti, T.' 3 'Kleino, I.' 4 'Samuilova, O.' 5 'Tossavainen, H.' 6 'Paakkonen, K.' 7 'Saksela, K.' 8 'Permi, P.' 9 # _citation.id primary _citation.title 'Structural basis of PxxDY motif recognition in SH3 binding' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 382 _citation.page_first 167 _citation.page_last 178 _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18644376 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2008.07.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Aitio, O.' 1 ? primary 'Hellman, M.' 2 ? primary 'Kesti, T.' 3 ? primary 'Kleino, I.' 4 ? primary 'Samuilova, O.' 5 ? primary 'Paakkonen, K.' 6 ? primary 'Tossavainen, H.' 7 ? primary 'Saksela, K.' 8 ? primary 'Permi, P.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Epidermal growth factor receptor kinase substrate 8-like protein 1' 7301.153 1 ? ? 'SH3 domain' ? 2 polymer syn '12-meric peptide from T-cell surface glycoprotein CD3 epsilon chain' 1394.550 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Epidermal growth factor receptor pathway substrate 8-related protein 1, EPS8-like protein 1' 2 'T-cell surface antigen T3/Leu-4 epsilon chain' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GSMGTAGKWVLCNYDFQARNSSELSVKQRDVLEVLDDSRKWWKVRDPAGQEGYVPYNILTPYPG GSMGTAGKWVLCNYDFQARNSSELSVKQRDVLEVLDDSRKWWKVRDPAGQEGYVPYNILTPYPG A ? 2 'polypeptide(L)' no no PPVPNPDYEPIR PPVPNPDYEPIR B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 GLY n 1 5 THR n 1 6 ALA n 1 7 GLY n 1 8 LYS n 1 9 TRP n 1 10 VAL n 1 11 LEU n 1 12 CYS n 1 13 ASN n 1 14 TYR n 1 15 ASP n 1 16 PHE n 1 17 GLN n 1 18 ALA n 1 19 ARG n 1 20 ASN n 1 21 SER n 1 22 SER n 1 23 GLU n 1 24 LEU n 1 25 SER n 1 26 VAL n 1 27 LYS n 1 28 GLN n 1 29 ARG n 1 30 ASP n 1 31 VAL n 1 32 LEU n 1 33 GLU n 1 34 VAL n 1 35 LEU n 1 36 ASP n 1 37 ASP n 1 38 SER n 1 39 ARG n 1 40 LYS n 1 41 TRP n 1 42 TRP n 1 43 LYS n 1 44 VAL n 1 45 ARG n 1 46 ASP n 1 47 PRO n 1 48 ALA n 1 49 GLY n 1 50 GLN n 1 51 GLU n 1 52 GLY n 1 53 TYR n 1 54 VAL n 1 55 PRO n 1 56 TYR n 1 57 ASN n 1 58 ILE n 1 59 LEU n 1 60 THR n 1 61 PRO n 1 62 TYR n 1 63 PRO n 1 64 GLY n 2 1 PRO n 2 2 PRO n 2 3 VAL n 2 4 PRO n 2 5 ASN n 2 6 PRO n 2 7 ASP n 2 8 TYR n 2 9 GLU n 2 10 PRO n 2 11 ILE n 2 12 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene EPS8L1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pET15b _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthetic construct; this sequence occurs naturally in humans.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ES8L1_HUMAN Q8TE68 1 TAGKWVLCNYDFQARNSSELSVKQRDVLEVLDDSRKWWKVRDPAGQEGYVPYNILTPYPG 478 ? 2 UNP CD3E_HUMAN P07766 2 PPVPNPDYEPIR 181 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ROL A 5 ? 64 ? Q8TE68 478 ? 537 ? 478 537 2 2 2ROL B 1 ? 12 ? P07766 181 ? 192 ? 538 549 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2ROL GLY A 1 ? UNP Q8TE68 ? ? 'expression tag' 474 1 1 2ROL SER A 2 ? UNP Q8TE68 ? ? 'expression tag' 475 2 1 2ROL MET A 3 ? UNP Q8TE68 ? ? 'expression tag' 476 3 1 2ROL GLY A 4 ? UNP Q8TE68 ? ? 'expression tag' 477 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 1 '3D HNCA' 1 4 1 '3D HN(CO)CA' 1 5 1 '3D HNCACB' 1 6 1 '3D CBCA(CO)NH' 1 7 1 '3D iHNCACB' 1 8 1 '3D iHNCA' 1 9 1 '3D HCCH-COSY' 1 10 1 '3D CC(CO)NH' 1 11 1 '3D H(CCO)NH' 1 12 1 '2D (HB)CB(CGCD)HD' 1 13 1 '2D (HB)CB(CGCDCE)HE' 1 14 1 '3D 1H-15N NOESY' 1 15 1 '3D 1H-13C NOESY' 1 16 1 '3D 1H-15N NOESY filteded/edited' 1 17 1 '3D 1H-13C NOESY filtered/edited' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 7.5 _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '0.8mM [U-98% 13C; U-98% 15N] Eps8L1SH3; 2.4mM CD3e peptide; 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Varian INOVA 1 'Varian INOVA' 600 Varian INOVA 2 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2ROL _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2ROL _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2ROL _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.0 1 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm' refinement Amber 8.0 2 Goddard 'chemical shift assignment' Sparky ? 3 Goddard 'peak picking' Sparky ? 4 Goddard 'data analysis' Sparky ? 5 Varian collection VNMR ? 6 Varian processing VNMR ? 7 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2ROL _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2ROL _struct.title 'Structural Basis of PxxDY motif recognition in SH3 binding' _struct.pdbx_descriptor ;Epidermal growth factor receptor kinase substrate 8-like protein 1, 12-meric peptide from T-cell surface glycoprotein CD3 epsilon chain ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ROL _struct_keywords.pdbx_keywords 'SPLICING/SIGNALING PROTEIN' _struct_keywords.text ;EPS8L1, CD3e, SH3, Complex Structure, Alternative splicing, Coiled coil, Cytoplasm, SH3 domain, Immunoglobulin domain, Membrane, Phosphoprotein, Receptor, Transmembrane, SPLICING-SIGNALING PROTEIN COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 51 ? PRO A 55 ? GLU A 524 PRO A 528 A 2 TRP A 41 ? ARG A 45 ? TRP A 514 ARG A 518 A 3 VAL A 31 ? ASP A 36 ? VAL A 504 ASP A 509 A 4 TRP A 9 ? CYS A 12 ? TRP A 482 CYS A 485 A 5 LEU A 59 ? PRO A 61 ? LEU A 532 PRO A 534 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 54 ? O VAL A 527 N TRP A 42 ? N TRP A 515 A 2 3 O LYS A 43 ? O LYS A 516 N LEU A 35 ? N LEU A 508 A 3 4 O LEU A 32 ? O LEU A 505 N VAL A 10 ? N VAL A 483 A 4 5 N LEU A 11 ? N LEU A 484 O THR A 60 ? O THR A 533 # _atom_sites.entry_id 2ROL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 474 474 GLY GLY A . n A 1 2 SER 2 475 475 SER SER A . n A 1 3 MET 3 476 476 MET MET A . n A 1 4 GLY 4 477 477 GLY GLY A . n A 1 5 THR 5 478 478 THR THR A . n A 1 6 ALA 6 479 479 ALA ALA A . n A 1 7 GLY 7 480 480 GLY GLY A . n A 1 8 LYS 8 481 481 LYS LYS A . n A 1 9 TRP 9 482 482 TRP TRP A . n A 1 10 VAL 10 483 483 VAL VAL A . n A 1 11 LEU 11 484 484 LEU LEU A . n A 1 12 CYS 12 485 485 CYS CYS A . n A 1 13 ASN 13 486 486 ASN ASN A . n A 1 14 TYR 14 487 487 TYR TYR A . n A 1 15 ASP 15 488 488 ASP ASP A . n A 1 16 PHE 16 489 489 PHE PHE A . n A 1 17 GLN 17 490 490 GLN GLN A . n A 1 18 ALA 18 491 491 ALA ALA A . n A 1 19 ARG 19 492 492 ARG ARG A . n A 1 20 ASN 20 493 493 ASN ASN A . n A 1 21 SER 21 494 494 SER SER A . n A 1 22 SER 22 495 495 SER SER A . n A 1 23 GLU 23 496 496 GLU GLU A . n A 1 24 LEU 24 497 497 LEU LEU A . n A 1 25 SER 25 498 498 SER SER A . n A 1 26 VAL 26 499 499 VAL VAL A . n A 1 27 LYS 27 500 500 LYS LYS A . n A 1 28 GLN 28 501 501 GLN GLN A . n A 1 29 ARG 29 502 502 ARG ARG A . n A 1 30 ASP 30 503 503 ASP ASP A . n A 1 31 VAL 31 504 504 VAL VAL A . n A 1 32 LEU 32 505 505 LEU LEU A . n A 1 33 GLU 33 506 506 GLU GLU A . n A 1 34 VAL 34 507 507 VAL VAL A . n A 1 35 LEU 35 508 508 LEU LEU A . n A 1 36 ASP 36 509 509 ASP ASP A . n A 1 37 ASP 37 510 510 ASP ASP A . n A 1 38 SER 38 511 511 SER SER A . n A 1 39 ARG 39 512 512 ARG ARG A . n A 1 40 LYS 40 513 513 LYS LYS A . n A 1 41 TRP 41 514 514 TRP TRP A . n A 1 42 TRP 42 515 515 TRP TRP A . n A 1 43 LYS 43 516 516 LYS LYS A . n A 1 44 VAL 44 517 517 VAL VAL A . n A 1 45 ARG 45 518 518 ARG ARG A . n A 1 46 ASP 46 519 519 ASP ASP A . n A 1 47 PRO 47 520 520 PRO PRO A . n A 1 48 ALA 48 521 521 ALA ALA A . n A 1 49 GLY 49 522 522 GLY GLY A . n A 1 50 GLN 50 523 523 GLN GLN A . n A 1 51 GLU 51 524 524 GLU GLU A . n A 1 52 GLY 52 525 525 GLY GLY A . n A 1 53 TYR 53 526 526 TYR TYR A . n A 1 54 VAL 54 527 527 VAL VAL A . n A 1 55 PRO 55 528 528 PRO PRO A . n A 1 56 TYR 56 529 529 TYR TYR A . n A 1 57 ASN 57 530 530 ASN ASN A . n A 1 58 ILE 58 531 531 ILE ILE A . n A 1 59 LEU 59 532 532 LEU LEU A . n A 1 60 THR 60 533 533 THR THR A . n A 1 61 PRO 61 534 534 PRO PRO A . n A 1 62 TYR 62 535 535 TYR TYR A . n A 1 63 PRO 63 536 536 PRO PRO A . n A 1 64 GLY 64 537 537 GLY GLY A . n B 2 1 PRO 1 538 538 PRO PRO B . n B 2 2 PRO 2 539 539 PRO PRO B . n B 2 3 VAL 3 540 540 VAL VAL B . n B 2 4 PRO 4 541 541 PRO PRO B . n B 2 5 ASN 5 542 542 ASN ASN B . n B 2 6 PRO 6 543 543 PRO PRO B . n B 2 7 ASP 7 544 544 ASP ASP B . n B 2 8 TYR 8 545 545 TYR TYR B . n B 2 9 GLU 9 546 546 GLU GLU B . n B 2 10 PRO 10 547 547 PRO PRO B . n B 2 11 ILE 11 548 548 ILE ILE B . n B 2 12 ARG 12 549 549 ARG ARG B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-02-26 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_cs' 2 3 'Structure model' '_pdbx_nmr_software.name' 3 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id Eps8L1SH3 0.8 mM '[U-98% 13C; U-98% 15N]' 1 'CD3e peptide' 2.4 mM ? 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 13 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 493 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 HG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 495 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.59 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 9 NE A ARG 518 ? ? CZ A ARG 518 ? ? NH1 A ARG 518 ? ? 123.36 120.30 3.06 0.50 N 2 20 NE A ARG 512 ? ? CZ A ARG 512 ? ? NH1 A ARG 512 ? ? 123.35 120.30 3.05 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 479 ? ? -152.19 -35.84 2 1 ASP A 510 ? ? -145.23 37.77 3 1 VAL B 540 ? ? 60.02 70.44 4 1 PRO B 541 ? ? -68.15 -171.38 5 2 THR A 478 ? ? -132.70 -33.31 6 2 ASP A 510 ? ? -141.83 39.93 7 2 VAL B 540 ? ? 63.87 78.48 8 3 ASP A 510 ? ? -144.99 46.20 9 3 VAL B 540 ? ? 60.28 72.81 10 4 ASP A 510 ? ? -141.42 50.35 11 4 PRO B 541 ? ? -65.88 -176.00 12 5 ASP A 510 ? ? -144.76 58.03 13 5 VAL B 540 ? ? 52.76 70.15 14 5 PRO B 541 ? ? -64.63 -178.24 15 6 THR A 478 ? ? -53.63 101.74 16 6 ASP A 510 ? ? -148.59 44.93 17 6 VAL B 540 ? ? 67.04 75.89 18 6 TYR B 545 ? ? -77.75 -169.90 19 7 ASP A 510 ? ? -149.18 41.72 20 7 VAL B 540 ? ? 46.50 82.37 21 8 ASP A 510 ? ? -143.06 40.36 22 8 PRO A 520 ? ? -75.45 27.93 23 8 ALA A 521 ? ? -135.34 -36.96 24 8 VAL B 540 ? ? 59.63 72.43 25 8 PRO B 541 ? ? -67.78 -171.65 26 9 ASP A 510 ? ? -143.55 44.54 27 9 PRO A 520 ? ? -75.91 25.67 28 9 ALA A 521 ? ? -133.19 -39.22 29 9 VAL B 540 ? ? 59.79 72.39 30 9 PRO B 541 ? ? -68.91 -172.52 31 10 ASP A 510 ? ? -145.93 49.37 32 10 PRO A 520 ? ? -76.59 29.46 33 10 ALA A 521 ? ? -136.22 -39.70 34 10 VAL B 540 ? ? 61.76 73.74 35 10 PRO B 541 ? ? -69.45 -168.20 36 11 ASN B 542 ? ? -48.13 152.31 37 12 ASP A 510 ? ? -142.88 40.84 38 12 PRO A 520 ? ? -75.66 27.78 39 12 ALA A 521 ? ? -135.60 -39.13 40 12 VAL B 540 ? ? 62.37 72.94 41 12 PRO B 541 ? ? -64.97 -175.88 42 13 THR A 478 ? ? -142.60 -25.17 43 13 ASP A 510 ? ? -144.20 44.41 44 13 PRO B 541 ? ? -76.61 -167.58 45 14 LYS A 481 ? ? -174.25 -177.77 46 14 ASP A 510 ? ? -148.36 43.30 47 14 VAL B 540 ? ? 56.75 71.58 48 14 PRO B 541 ? ? -65.14 -178.59 49 14 GLU B 546 ? ? -152.50 64.56 50 15 THR A 478 ? ? -60.75 87.22 51 15 ASP A 510 ? ? -141.36 46.05 52 15 PRO B 541 ? ? -77.72 -168.43 53 16 THR A 478 ? ? -103.98 -72.89 54 16 ASP A 510 ? ? -144.76 21.39 55 16 ASN B 542 ? ? -47.24 150.15 56 17 ASP A 510 ? ? -144.76 34.89 57 17 PRO A 520 ? ? -75.81 22.06 58 17 ALA A 521 ? ? -130.12 -37.43 59 17 ASP B 544 ? ? -69.59 -178.70 60 18 ASP A 510 ? ? -143.42 46.68 61 18 ASN B 542 ? ? -39.26 130.11 62 18 ASP B 544 ? ? -67.24 -179.70 63 19 SER A 475 ? ? -113.06 73.47 64 19 ASP A 510 ? ? -143.93 45.35 65 19 PRO A 520 ? ? -75.67 30.36 66 19 ALA A 521 ? ? -136.74 -40.20 67 19 PRO B 541 ? ? -78.65 -167.62 68 20 MET A 476 ? ? -141.11 -48.42 69 20 ASP A 510 ? ? -143.74 33.83 70 20 PRO A 520 ? ? -76.55 28.73 71 20 ALA A 521 ? ? -134.72 -39.21 72 20 VAL B 540 ? ? 49.49 72.37 73 20 PRO B 541 ? ? -64.50 -179.23 74 20 TYR B 545 ? ? 58.25 13.22 #