HEADER TRANSCRIPTION 01-MAY-08 2RP5 TITLE SOLUTION STRUCTURE OF THE OLIGOMERIZATION DOMAIN IN CEP-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN CEP-1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: OLIGOMERIZATION DOMAIN OF CEP-1, UNP RESIDUES 514-644; COMPND 5 SYNONYM: TRANSCRIPTION FACTOR CEP-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_TAXID: 6239; SOURCE 4 GENE: CEP-1, F52B5.5, F52B5.5A; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PBH4 KEYWDS CEP-1, P53, OLIGOMERIZATION DOMAIN, SAM DOMAIN, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.D.OU,V.DOETSCH REVDAT 3 16-MAR-22 2RP5 1 REMARK SEQADV REVDAT 2 24-FEB-09 2RP5 1 VERSN REVDAT 1 27-MAY-08 2RP5 0 JRNL AUTH H.D.OU,F.LOEHR,V.VOGEL,W.MAENTELE,V.DOETSCH JRNL TITL STRUCTURAL EVOLUTION OF C-TERMINAL DOMAINS IN THE P53 FAMILY JRNL REF EMBO J. V. 26 3463 2007 JRNL REFN ISSN 0261-4189 JRNL PMID 17581633 JRNL DOI 10.1038/SJ.EMBOJ.7601764 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2, ARIA 1.2 REMARK 3 AUTHORS : LINGE, O'DONOGHUE, NILGES (ARIA), LINGE, REMARK 3 O'DONOGHUE, NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 100 STRUCTURES WERE CALCULATED, AND THE REMARK 3 BEST 20 LOWEST ENERGIES STRUCTURES UNDERWENT WATER REFINEMENT REMARK 4 REMARK 4 2RP5 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1000150115. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM SODIUM PHOSPHATE, 100MM REMARK 210 SODIUM CHLORIDE, 0.03% SODIUM REMARK 210 AZIDE, 0.4-0.6 MM [U-15N] REMARK 210 PROTEIN, 90% H2O/10% D2O; 20MM REMARK 210 SODIUM PHOSPHATE, 100MM SODIUM REMARK 210 CHLORIDE, 0.03% SODIUM AZIDE, REMARK 210 0.5MM [U-13C; U-15N] PROTEIN, REMARK 210 100% D2O; 20MM SODIUM PHOSPHATE, REMARK 210 100MM SODIUM CHLORIDE, 0.03% REMARK 210 SODIUM AZIDE, 0.4-0.6MM PROTEIN, REMARK 210 100% D2O; 20MM SODIUM PHOSPHATE, REMARK 210 100MM SODIUM CHLORIDE, 0.03% REMARK 210 SODIUM AZIDE, 0.4-0.6MM [U-13C; REMARK 210 U-15N] PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D 1H REMARK 210 -15N NOESY; 3D 1H-13C NOESY; 2D REMARK 210 1H-1H NOESY; 4D J RESOLVE NOESY; REMARK 210 3D HN(CO)CA REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 800 MHZ; 700 MHZ; 600 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR, NMRPIPE, TALOS, XEASY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 509 REMARK 465 PRO A 510 REMARK 465 LEU A 511 REMARK 465 GLY A 512 REMARK 465 SER A 513 REMARK 465 HIS A 514 REMARK 465 GLU A 515 REMARK 465 ASN A 516 REMARK 465 CYS A 517 REMARK 465 GLN A 518 REMARK 465 SER A 519 REMARK 465 PRO A 520 REMARK 465 SER A 521 REMARK 465 MET A 522 REMARK 465 LYS A 523 REMARK 465 ARG A 524 REMARK 465 SER A 525 REMARK 465 ARG A 526 REMARK 465 CYS A 527 REMARK 465 GLY B 509 REMARK 465 PRO B 510 REMARK 465 LEU B 511 REMARK 465 GLY B 512 REMARK 465 SER B 513 REMARK 465 HIS B 514 REMARK 465 GLU B 515 REMARK 465 ASN B 516 REMARK 465 CYS B 517 REMARK 465 GLN B 518 REMARK 465 SER B 519 REMARK 465 PRO B 520 REMARK 465 SER B 521 REMARK 465 MET B 522 REMARK 465 LYS B 523 REMARK 465 ARG B 524 REMARK 465 SER B 525 REMARK 465 ARG B 526 REMARK 465 CYS B 527 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 541 HZ3 LYS A 544 1.59 REMARK 500 OE2 GLU A 605 HZ1 LYS A 608 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 529 -61.29 -176.85 REMARK 500 1 TYR A 530 87.58 -154.54 REMARK 500 1 ARG A 557 14.00 -152.13 REMARK 500 1 PRO A 562 87.27 -64.73 REMARK 500 1 ALA A 584 51.23 -100.25 REMARK 500 1 TYR A 597 19.87 -154.59 REMARK 500 1 HIS A 609 -54.57 -124.04 REMARK 500 1 ASN A 610 -30.74 85.27 REMARK 500 1 ASN B 529 -87.04 64.57 REMARK 500 1 LYS B 554 -71.73 -79.12 REMARK 500 1 ARG B 557 -3.20 -147.59 REMARK 500 1 PRO B 571 3.76 -63.03 REMARK 500 1 ALA B 584 49.75 -94.80 REMARK 500 1 TYR B 597 16.50 -152.16 REMARK 500 1 ASN B 610 -28.06 84.71 REMARK 500 1 PRO B 643 -83.60 -76.10 REMARK 500 2 ALA A 584 45.43 -90.50 REMARK 500 2 HIS A 586 -23.73 86.96 REMARK 500 2 TYR A 597 25.89 -149.10 REMARK 500 2 ARG B 557 25.29 -153.64 REMARK 500 2 VAL B 561 130.35 76.62 REMARK 500 2 PRO B 571 7.36 -62.00 REMARK 500 2 TYR B 597 13.02 -154.92 REMARK 500 3 ARG A 557 -27.33 -160.51 REMARK 500 3 VAL A 561 121.05 80.72 REMARK 500 3 PRO A 562 84.24 -68.63 REMARK 500 3 PRO A 571 -1.68 -59.06 REMARK 500 3 ALA A 584 53.45 -107.07 REMARK 500 3 TYR A 597 17.61 -157.64 REMARK 500 3 HIS A 609 -62.91 -123.61 REMARK 500 3 ASN A 610 -30.25 80.84 REMARK 500 3 ARG B 557 25.14 -153.65 REMARK 500 3 VAL B 561 117.02 74.88 REMARK 500 3 ALA B 584 47.55 -95.05 REMARK 500 3 HIS B 586 -42.65 -178.36 REMARK 500 3 TYR B 597 19.02 -157.71 REMARK 500 3 ASN B 610 -23.04 84.13 REMARK 500 3 PRO B 643 -140.90 -87.87 REMARK 500 4 ARG A 557 40.31 -172.26 REMARK 500 4 THR A 559 -76.28 -57.65 REMARK 500 4 PRO A 571 19.19 -67.90 REMARK 500 4 HIS A 609 -134.46 -120.04 REMARK 500 4 ASN A 610 -29.65 175.00 REMARK 500 4 ASN B 529 -60.35 69.78 REMARK 500 4 ARG B 557 -38.97 -163.51 REMARK 500 4 PRO B 571 22.46 -68.60 REMARK 500 4 ALA B 584 45.67 -87.17 REMARK 500 4 HIS B 586 -37.38 -178.15 REMARK 500 4 HIS B 609 -71.94 -119.06 REMARK 500 4 ASN B 610 -36.91 103.31 REMARK 500 REMARK 500 THIS ENTRY HAS 277 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2RP4 RELATED DB: PDB DBREF 2RP5 A 514 644 UNP Q20646 Q20646_CAEEL 514 644 DBREF 2RP5 B 514 644 UNP Q20646 Q20646_CAEEL 514 644 SEQADV 2RP5 GLY A 509 UNP Q20646 EXPRESSION TAG SEQADV 2RP5 PRO A 510 UNP Q20646 EXPRESSION TAG SEQADV 2RP5 LEU A 511 UNP Q20646 EXPRESSION TAG SEQADV 2RP5 GLY A 512 UNP Q20646 EXPRESSION TAG SEQADV 2RP5 SER A 513 UNP Q20646 EXPRESSION TAG SEQADV 2RP5 GLY B 509 UNP Q20646 EXPRESSION TAG SEQADV 2RP5 PRO B 510 UNP Q20646 EXPRESSION TAG SEQADV 2RP5 LEU B 511 UNP Q20646 EXPRESSION TAG SEQADV 2RP5 GLY B 512 UNP Q20646 EXPRESSION TAG SEQADV 2RP5 SER B 513 UNP Q20646 EXPRESSION TAG SEQRES 1 A 136 GLY PRO LEU GLY SER HIS GLU ASN CYS GLN SER PRO SER SEQRES 2 A 136 MET LYS ARG SER ARG CYS THR ASN TYR SER PHE ARG THR SEQRES 3 A 136 LEU THR LEU SER THR ALA GLU TYR THR LYS VAL VAL GLU SEQRES 4 A 136 PHE LEU ALA ARG GLU ALA LYS VAL PRO ARG TYR THR TRP SEQRES 5 A 136 VAL PRO THR GLN VAL VAL SER HIS ILE LEU PRO THR GLU SEQRES 6 A 136 GLY LEU GLU ARG PHE LEU THR ALA ILE LYS ALA GLY HIS SEQRES 7 A 136 ASP SER VAL LEU PHE ASN ALA ASN GLY ILE TYR THR MET SEQRES 8 A 136 GLY ASP MET ILE ARG GLU PHE GLU LYS HIS ASN ASP ILE SEQRES 9 A 136 PHE GLU ARG ILE GLY ILE ASP SER SER LYS LEU SER LYS SEQRES 10 A 136 TYR TYR GLU ALA PHE LEU SER PHE TYR ARG ILE GLN GLU SEQRES 11 A 136 ALA MET LYS LEU PRO LYS SEQRES 1 B 136 GLY PRO LEU GLY SER HIS GLU ASN CYS GLN SER PRO SER SEQRES 2 B 136 MET LYS ARG SER ARG CYS THR ASN TYR SER PHE ARG THR SEQRES 3 B 136 LEU THR LEU SER THR ALA GLU TYR THR LYS VAL VAL GLU SEQRES 4 B 136 PHE LEU ALA ARG GLU ALA LYS VAL PRO ARG TYR THR TRP SEQRES 5 B 136 VAL PRO THR GLN VAL VAL SER HIS ILE LEU PRO THR GLU SEQRES 6 B 136 GLY LEU GLU ARG PHE LEU THR ALA ILE LYS ALA GLY HIS SEQRES 7 B 136 ASP SER VAL LEU PHE ASN ALA ASN GLY ILE TYR THR MET SEQRES 8 B 136 GLY ASP MET ILE ARG GLU PHE GLU LYS HIS ASN ASP ILE SEQRES 9 B 136 PHE GLU ARG ILE GLY ILE ASP SER SER LYS LEU SER LYS SEQRES 10 B 136 TYR TYR GLU ALA PHE LEU SER PHE TYR ARG ILE GLN GLU SEQRES 11 B 136 ALA MET LYS LEU PRO LYS HELIX 1 1 THR A 539 VAL A 555 1 17 HELIX 2 2 PRO A 562 SER A 567 1 6 HELIX 3 3 LEU A 575 ILE A 582 1 8 HELIX 4 4 ASP A 587 GLY A 595 1 9 HELIX 5 5 GLY A 600 HIS A 609 1 10 HELIX 6 6 ASP A 611 GLY A 617 1 7 HELIX 7 7 ASP A 619 SER A 621 5 3 HELIX 8 8 LYS A 622 LEU A 642 1 21 HELIX 9 9 THR B 539 VAL B 555 1 17 HELIX 10 10 PRO B 562 SER B 567 1 6 HELIX 11 11 LEU B 575 ILE B 582 1 8 HELIX 12 12 ASP B 587 GLY B 595 1 9 HELIX 13 13 GLY B 600 HIS B 609 1 10 HELIX 14 14 ASP B 611 GLY B 617 1 7 HELIX 15 15 ASP B 619 LEU B 642 1 24 SHEET 1 A 2 PHE A 532 SER A 538 0 SHEET 2 A 2 PHE B 532 SER B 538 -1 O ARG B 533 N LEU A 537 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1