HEADER METAL BINDING PROTEIN 24-JUL-08 2RPR TITLE SOLUTION STRUCTURE OF THE FIFTH FLYWCH DOMAIN OF FLYWCH-TYPE ZINC TITLE 2 FINGER-CONTAINING PROTEIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLYWCH-TYPE ZINC FINGER-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FLYWCH-TYPE 5, UNP RESIDUES 595-674; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FLYWCH1; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: P060116-06 KEYWDS FLYWCH DOMAIN, ALTERNATIVE SPLICING, DNA-BINDING, METAL-BINDING, KEYWDS 2 NUCLEUS, ZINC, ZINC-FINGER, METAL BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.ENOMOTO,K.SAITO,N.TOCHIO,T.KIGAWA,S.YOKOYAMA,N.NAMEKI REVDAT 2 16-MAR-22 2RPR 1 REMARK SEQADV REVDAT 1 04-AUG-09 2RPR 0 JRNL AUTH M.ENOMOTO,K.SAITO,N.TOCHIO,T.KIGAWA,S.YOKOYAMA,N.NAMEKI JRNL TITL SOLUTION STRUCTURE OF THE FIFTH FLYWCH DOMAIN OF FLYWCH-TYPE JRNL TITL 2 ZINC FINGER-CONTAINING PROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RPR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000150137. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.3 MM FLYWCH_DOMAIN, 0.05 MM REMARK 210 ZINC ION, 20 MM D-TRIS-HCL(PH7.0) REMARK 210 , 100 MM NACL, 1 MM D-DTT, 0.02 % REMARK 210 NAN3, 10% D2O, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, XWINNMR, NMRVIEW, REMARK 210 KUJIRA REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 10 -172.33 -69.85 REMARK 500 1 SER A 17 -174.02 -54.13 REMARK 500 1 LEU A 18 101.86 -34.56 REMARK 500 1 ALA A 36 32.68 -88.85 REMARK 500 1 CYS A 44 109.60 -50.16 REMARK 500 1 ASP A 46 30.86 -85.47 REMARK 500 1 ARG A 49 -60.56 -96.70 REMARK 500 2 LEU A 8 141.40 -175.11 REMARK 500 2 PRO A 10 -165.20 -69.73 REMARK 500 2 LEU A 18 28.17 41.25 REMARK 500 2 SER A 27 19.94 56.05 REMARK 500 2 ALA A 36 38.01 -82.54 REMARK 500 2 CYS A 44 108.46 -46.10 REMARK 500 2 ASP A 46 42.06 -81.39 REMARK 500 2 MET A 66 -65.10 -93.87 REMARK 500 3 SER A 2 36.24 -90.65 REMARK 500 3 PRO A 10 -163.83 -69.80 REMARK 500 4 PRO A 10 -169.02 -69.77 REMARK 500 4 ASP A 46 32.06 -88.26 REMARK 500 4 MET A 66 -62.25 -103.40 REMARK 500 4 GLU A 85 -64.15 -92.28 REMARK 500 5 PRO A 10 -166.71 -69.72 REMARK 500 5 SER A 17 -75.92 -34.79 REMARK 500 5 ASP A 46 48.19 -85.47 REMARK 500 5 ARG A 53 50.23 -105.58 REMARK 500 6 SER A 3 65.01 -119.58 REMARK 500 6 PRO A 10 -165.25 -69.79 REMARK 500 6 SER A 17 -68.99 -106.73 REMARK 500 6 LEU A 18 36.44 -84.11 REMARK 500 6 CYS A 44 107.56 -46.59 REMARK 500 6 ASP A 46 40.52 -88.80 REMARK 500 6 ARG A 49 -61.93 -92.41 REMARK 500 6 CYS A 52 72.86 -105.50 REMARK 500 6 SER A 54 122.72 -35.55 REMARK 500 7 PRO A 10 -176.10 -69.68 REMARK 500 7 CYS A 44 108.39 -46.42 REMARK 500 7 ASP A 46 35.79 -84.09 REMARK 500 7 ARG A 86 73.41 -103.55 REMARK 500 8 LEU A 18 71.15 -68.24 REMARK 500 8 LYS A 32 108.58 -45.18 REMARK 500 8 ASP A 46 44.31 -79.69 REMARK 500 9 PRO A 10 -179.50 -69.70 REMARK 500 9 CYS A 44 114.11 -38.16 REMARK 500 9 ASP A 46 43.32 -85.56 REMARK 500 9 MET A 66 -62.82 -102.46 REMARK 500 9 GLU A 85 -72.26 -98.01 REMARK 500 10 LEU A 8 143.97 -34.28 REMARK 500 10 PRO A 10 -167.89 -69.82 REMARK 500 10 LEU A 18 70.87 -101.84 REMARK 500 10 ASP A 46 36.60 -83.33 REMARK 500 REMARK 500 THIS ENTRY HAS 96 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 44 SG REMARK 620 2 CYS A 52 SG 106.3 REMARK 620 3 HIS A 69 ND1 100.6 110.0 REMARK 620 4 HIS A 71 NE2 90.6 98.2 145.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 DBREF 2RPR A 8 87 UNP Q4VC44 FWCH1_HUMAN 595 674 SEQADV 2RPR GLY A 1 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR SER A 2 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR SER A 3 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR GLY A 4 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR SER A 5 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR SER A 6 UNP Q4VC44 EXPRESSION TAG SEQADV 2RPR GLY A 7 UNP Q4VC44 EXPRESSION TAG SEQRES 1 A 87 GLY SER SER GLY SER SER GLY LEU ARG PRO LEU GLU PHE SEQRES 2 A 87 LEU ARG THR SER LEU GLY GLY ARG PHE LEU VAL HIS GLU SEQRES 3 A 87 SER PHE LEU TYR ARG LYS GLU LYS ALA ALA GLY GLU LYS SEQRES 4 A 87 VAL TYR TRP MET CYS ARG ASP GLN ALA ARG LEU GLY CYS SEQRES 5 A 87 ARG SER ARG ALA ILE THR GLN GLY HIS ARG ILE MET VAL SEQRES 6 A 87 MET ARG SER HIS CYS HIS GLN PRO ASP LEU ALA GLY LEU SEQRES 7 A 87 GLU ALA LEU ARG GLN ARG GLU ARG LEU HET ZN A 201 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 ASP A 46 ALA A 48 5 3 HELIX 2 2 ASP A 74 ARG A 84 1 11 SHEET 1 A 6 GLU A 12 THR A 16 0 SHEET 2 A 6 GLY A 20 HIS A 25 -1 O PHE A 22 N LEU A 14 SHEET 3 A 6 PHE A 28 ALA A 35 -1 O TYR A 30 N LEU A 23 SHEET 4 A 6 VAL A 40 CYS A 44 -1 O TYR A 41 N GLU A 33 SHEET 5 A 6 ARG A 55 GLN A 59 -1 O ALA A 56 N TRP A 42 SHEET 6 A 6 ARG A 62 VAL A 65 -1 O MET A 64 N ILE A 57 LINK SG CYS A 44 ZN ZN A 201 1555 1555 2.35 LINK SG CYS A 52 ZN ZN A 201 1555 1555 2.28 LINK ND1 HIS A 69 ZN ZN A 201 1555 1555 2.10 LINK NE2 HIS A 71 ZN ZN A 201 1555 1555 2.10 SITE 1 AC1 5 PHE A 28 CYS A 44 ASP A 46 CYS A 52 SITE 2 AC1 5 HIS A 69 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1