HEADER SIGNALING PROTEIN 21-DEC-09 2RQV TITLE SOLUTION STRUCTURE OF SH3CI DOMAIN OF BEM1P COMPND MOL_ID: 1; COMPND 2 MOLECULE: BUD EMERGENCE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3CI DOMAIN, RESIDUES 156-260; COMPND 5 SYNONYM: BEM1P, SUPPRESSOR OF RHO3 PROTEIN 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-21D KEYWDS BEM1P, SH3, CDC42P, CYTOPLASM, CYTOSKELETON, SH3 DOMAIN, SIGNALING KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.TAKAKU,K.OGURA,F.INAGAKI REVDAT 4 16-MAR-22 2RQV 1 REMARK SEQADV REVDAT 3 23-JUN-10 2RQV 1 JRNL REVDAT 2 05-MAY-10 2RQV 1 JRNL REVDAT 1 21-APR-10 2RQV 0 JRNL AUTH T.TAKAKU,K.OGURA,H.KUMETA,N.YOSHIDA,F.INAGAKI JRNL TITL SOLUTION STRUCTURE OF A NOVEL CDC42-BINDING MODULE OF BEM1 JRNL TITL 2 AND ITS INTERACTION WITH STE20 AND CDC42 JRNL REF J.BIOL.CHEM. V. 285 19346 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20410294 JRNL DOI 10.1074/JBC.M110.116749 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RQV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-DEC-09. REMARK 100 THE DEPOSITION ID IS D_1000150177. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN; 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 190 28.29 43.51 REMARK 500 1 LYS A 196 82.75 -164.82 REMARK 500 1 ALA A 218 -175.54 -172.87 REMARK 500 1 ASN A 235 29.13 41.36 REMARK 500 1 LEU A 236 103.75 -45.21 REMARK 500 1 VAL A 259 113.28 -171.41 REMARK 500 2 LYS A 170 -177.96 -66.10 REMARK 500 2 CYS A 190 29.00 42.68 REMARK 500 2 PRO A 197 -162.47 -75.02 REMARK 500 2 LEU A 201 94.25 -49.21 REMARK 500 2 ALA A 218 49.21 74.51 REMARK 500 2 THR A 219 -49.48 -133.47 REMARK 500 2 ASN A 235 29.74 40.68 REMARK 500 2 TYR A 249 112.57 -35.07 REMARK 500 2 LEU A 256 -66.70 -105.98 REMARK 500 2 VAL A 259 177.52 -54.55 REMARK 500 3 ASP A 165 108.67 -54.06 REMARK 500 3 VAL A 178 156.47 -45.81 REMARK 500 3 CYS A 190 28.62 42.96 REMARK 500 3 ALA A 218 132.62 -174.33 REMARK 500 3 ASN A 225 -175.95 -62.88 REMARK 500 3 ALA A 247 155.91 -43.75 REMARK 500 3 ARG A 248 -174.40 175.06 REMARK 500 4 ASN A 189 18.06 58.78 REMARK 500 4 CYS A 190 18.62 57.92 REMARK 500 4 LYS A 196 87.70 -154.94 REMARK 500 4 TRP A 242 -71.59 -77.59 REMARK 500 4 ALA A 247 116.06 -174.48 REMARK 500 5 LYS A 170 -179.79 -68.82 REMARK 500 5 CYS A 190 28.28 42.95 REMARK 500 5 ASP A 216 -178.73 -58.22 REMARK 500 5 ILE A 217 67.39 -100.46 REMARK 500 5 ASN A 225 -175.90 -58.15 REMARK 500 5 SER A 252 57.25 -97.86 REMARK 500 5 SER A 255 128.19 -171.51 REMARK 500 6 SER A 157 149.70 -177.94 REMARK 500 6 ASN A 189 19.89 58.74 REMARK 500 6 CYS A 190 18.78 57.36 REMARK 500 6 LEU A 201 99.26 -55.83 REMARK 500 6 PHE A 211 19.06 -143.85 REMARK 500 6 ASP A 216 -59.30 -129.27 REMARK 500 6 ILE A 246 152.39 -40.28 REMARK 500 6 ALA A 247 -78.69 -41.03 REMARK 500 6 ARG A 248 22.01 83.79 REMARK 500 6 TYR A 249 179.18 179.74 REMARK 500 6 SER A 252 154.80 -44.19 REMARK 500 7 TYR A 159 107.98 -168.31 REMARK 500 7 GLU A 169 -35.53 -130.36 REMARK 500 7 LYS A 170 -163.26 -58.37 REMARK 500 7 GLU A 173 -176.90 -60.27 REMARK 500 REMARK 500 THIS ENTRY HAS 176 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2RQW RELATED DB: PDB REMARK 900 BEM1P SH3CI DOMAIN COMPLEXED WITH STE20P-PRR PEPTIDE DBREF 2RQV A 156 260 UNP P29366 BEM1_YEAST 156 260 SEQADV 2RQV GLY A 153 UNP P29366 EXPRESSION TAG SEQADV 2RQV PRO A 154 UNP P29366 EXPRESSION TAG SEQADV 2RQV LEU A 155 UNP P29366 EXPRESSION TAG SEQRES 1 A 108 GLY PRO LEU GLY SER LEU TYR ALA ILE VAL LEU TYR ASP SEQRES 2 A 108 PHE LYS ALA GLU LYS ALA ASP GLU LEU THR THR TYR VAL SEQRES 3 A 108 GLY GLU ASN LEU PHE ILE CYS ALA HIS HIS ASN CYS GLU SEQRES 4 A 108 TRP PHE ILE ALA LYS PRO ILE GLY ARG LEU GLY GLY PRO SEQRES 5 A 108 GLY LEU VAL PRO VAL GLY PHE VAL SER ILE ILE ASP ILE SEQRES 6 A 108 ALA THR GLY TYR ALA THR GLY ASN ASP VAL ILE GLU ASP SEQRES 7 A 108 ILE LYS SER VAL ASN LEU PRO THR VAL GLN GLU TRP LYS SEQRES 8 A 108 SER ASN ILE ALA ARG TYR LYS ALA SER ASN ILE SER LEU SEQRES 9 A 108 GLY SER VAL GLU HELIX 1 1 ASP A 226 LYS A 232 1 7 HELIX 2 2 THR A 238 ILE A 246 1 9 SHEET 1 A 2 ALA A 160 VAL A 162 0 SHEET 2 A 2 GLU A 180 LEU A 182 -1 O LEU A 182 N ALA A 160 SHEET 1 B 3 HIS A 187 HIS A 188 0 SHEET 2 B 3 TRP A 192 ALA A 195 -1 O TRP A 192 N HIS A 188 SHEET 3 B 3 GLY A 205 PRO A 208 -1 O VAL A 207 N PHE A 193 CISPEP 1 GLY A 203 PRO A 204 1 0.04 CISPEP 2 GLY A 203 PRO A 204 2 0.00 CISPEP 3 GLY A 203 PRO A 204 3 0.02 CISPEP 4 GLY A 203 PRO A 204 4 0.08 CISPEP 5 GLY A 203 PRO A 204 5 -0.02 CISPEP 6 GLY A 203 PRO A 204 6 -0.01 CISPEP 7 GLY A 203 PRO A 204 7 0.05 CISPEP 8 GLY A 203 PRO A 204 8 0.05 CISPEP 9 GLY A 203 PRO A 204 9 0.02 CISPEP 10 GLY A 203 PRO A 204 10 -0.13 CISPEP 11 GLY A 203 PRO A 204 11 0.05 CISPEP 12 GLY A 203 PRO A 204 12 0.05 CISPEP 13 GLY A 203 PRO A 204 13 0.00 CISPEP 14 GLY A 203 PRO A 204 14 -0.14 CISPEP 15 GLY A 203 PRO A 204 15 -0.04 CISPEP 16 GLY A 203 PRO A 204 16 0.06 CISPEP 17 GLY A 203 PRO A 204 17 0.01 CISPEP 18 GLY A 203 PRO A 204 18 0.00 CISPEP 19 GLY A 203 PRO A 204 19 0.00 CISPEP 20 GLY A 203 PRO A 204 20 -0.05 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1