HEADER SIGNALING PROTEIN 14-JAN-10 2RQX TITLE SOLUTION NMR STRUCTURE OF PMRD FROM KLEBSIELLA PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMYXIN B RESISTANCE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PMRD; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 484021; SOURCE 4 STRAIN: NTUH-K2044; SOURCE 5 GENE: PMRD, KP1_3573; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET 29B KEYWDS SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.C.LUO,C.CHEN REVDAT 2 01-MAY-24 2RQX 1 REMARK SEQADV REVDAT 1 01-DEC-10 2RQX 0 JRNL AUTH S.C.LUO,Y.C.LOU,H.Y.CHENG,Y.R.PAN,H.L.PENG,C.CHEN JRNL TITL SOLUTION STRUCTURE AND PHOSPHO-PMRA RECOGNITION MODE OF PMRD JRNL TITL 2 FROM KLEBSIELLA PNEUMONIAE JRNL REF J.STRUCT.BIOL. V. 172 319 2010 JRNL REFN ISSN 1047-8477 JRNL PMID 20538060 JRNL DOI 10.1016/J.JSB.2010.06.007 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 2.18 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RQX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000150179. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 30MM SODIUM PHOSPHATE-1, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW 5, NMRPIPE, TALOS, X REMARK 210 -PLOR 2.18 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 LEU A 82 REMARK 465 GLU A 83 REMARK 465 HIS A 84 REMARK 465 HIS A 85 REMARK 465 HIS A 86 REMARK 465 HIS A 87 REMARK 465 HIS A 88 REMARK 465 HIS A 89 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 10 172.86 -55.88 REMARK 500 1 ALA A 14 -48.08 172.88 REMARK 500 1 SER A 15 32.97 -166.07 REMARK 500 1 ALA A 25 -34.14 -159.51 REMARK 500 1 CYS A 35 -13.50 -149.47 REMARK 500 1 LEU A 37 21.67 45.96 REMARK 500 1 ALA A 49 -63.95 -171.25 REMARK 500 1 ALA A 51 -29.76 -176.18 REMARK 500 1 ARG A 52 170.66 -49.61 REMARK 500 1 PRO A 59 -6.56 -45.69 REMARK 500 1 ASN A 67 102.30 -173.72 REMARK 500 1 HIS A 70 47.65 -75.97 REMARK 500 1 ASP A 80 33.53 -76.48 REMARK 500 2 ASP A 10 172.84 -55.95 REMARK 500 2 ALA A 14 -42.54 168.92 REMARK 500 2 SER A 15 34.09 -168.50 REMARK 500 2 ALA A 25 29.81 -154.66 REMARK 500 2 CYS A 35 -13.89 -146.41 REMARK 500 2 LEU A 37 19.67 45.96 REMARK 500 2 ALA A 49 -80.52 -173.06 REMARK 500 2 ALA A 51 -27.36 -176.30 REMARK 500 2 ARG A 52 166.63 -47.39 REMARK 500 2 PRO A 59 -7.06 -45.54 REMARK 500 2 ASN A 67 101.80 -173.79 REMARK 500 3 ASP A 10 172.53 -55.76 REMARK 500 3 ALA A 14 -55.52 175.45 REMARK 500 3 SER A 15 40.85 -159.85 REMARK 500 3 ALA A 25 -33.68 -159.18 REMARK 500 3 CYS A 35 -16.50 -143.54 REMARK 500 3 LEU A 37 74.14 44.70 REMARK 500 3 ARG A 38 25.00 -152.03 REMARK 500 3 ALA A 49 -65.78 -175.11 REMARK 500 3 ALA A 51 -29.02 -176.18 REMARK 500 3 ARG A 52 171.33 -48.89 REMARK 500 3 PRO A 59 -4.71 -46.52 REMARK 500 3 ASN A 67 106.02 -174.43 REMARK 500 3 ASP A 80 -12.47 -49.55 REMARK 500 4 ASP A 10 172.79 -55.83 REMARK 500 4 ALA A 14 -43.96 171.18 REMARK 500 4 SER A 15 31.21 -168.05 REMARK 500 4 ALA A 25 -33.93 -160.04 REMARK 500 4 CYS A 35 -13.47 -150.00 REMARK 500 4 ARG A 38 24.17 -146.74 REMARK 500 4 ALA A 49 -68.74 -172.27 REMARK 500 4 ALA A 51 -29.68 -178.64 REMARK 500 4 PRO A 59 -11.28 -44.84 REMARK 500 4 ASN A 67 104.15 176.68 REMARK 500 5 ASP A 10 172.67 -56.16 REMARK 500 5 ALA A 14 -61.98 176.70 REMARK 500 5 SER A 15 30.00 -152.64 REMARK 500 REMARK 500 THIS ENTRY HAS 245 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2RQX A 1 81 UNP C4XAL0 C4XAL0_KLEPN 1 81 SEQADV 2RQX LEU A 82 UNP C4XAL0 EXPRESSION TAG SEQADV 2RQX GLU A 83 UNP C4XAL0 EXPRESSION TAG SEQADV 2RQX HIS A 84 UNP C4XAL0 EXPRESSION TAG SEQADV 2RQX HIS A 85 UNP C4XAL0 EXPRESSION TAG SEQADV 2RQX HIS A 86 UNP C4XAL0 EXPRESSION TAG SEQADV 2RQX HIS A 87 UNP C4XAL0 EXPRESSION TAG SEQADV 2RQX HIS A 88 UNP C4XAL0 EXPRESSION TAG SEQADV 2RQX HIS A 89 UNP C4XAL0 EXPRESSION TAG SEQRES 1 A 89 MET GLU TRP TRP VAL LYS LYS VAL GLN ASP ASN ALA SER SEQRES 2 A 89 ALA SER LEU CYS ARG VAL VAL LEU GLN SER GLY ALA LEU SEQRES 3 A 89 GLU MET ILE ALA GLU ILE GLU ALA CYS ARG LEU ARG LEU SEQRES 4 A 89 ARG GLU GLY ASP LYS LEU THR PRO LEU ALA ASP ALA ARG SEQRES 5 A 89 TYR CYS LEU ASN ASN ASN PRO THR GLN THR LEU LYS ILE SEQRES 6 A 89 ARG ASN ALA THR HIS TYR SER SER GLU ARG TRP THR ASN SEQRES 7 A 89 ALA ASP LYS LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 SER A 72 ASP A 80 1 9 SHEET 1 A 7 TRP A 3 GLN A 9 0 SHEET 2 A 7 CYS A 17 SER A 23 -1 O GLN A 22 N TRP A 4 SHEET 3 A 7 LEU A 26 GLU A 33 -1 O ILE A 32 N CYS A 17 SHEET 4 A 7 THR A 62 THR A 69 -1 O THR A 69 N ILE A 29 SHEET 5 A 7 TYR A 53 LEU A 55 -1 N TYR A 53 O LEU A 63 SHEET 6 A 7 LYS A 44 PRO A 47 -1 N THR A 46 O CYS A 54 SHEET 7 A 7 TRP A 3 GLN A 9 -1 N TRP A 3 O LEU A 45 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1