HEADER MOTOR PROTEIN 04-JUN-10 2RR7 TITLE MICROTUBULE BINDING DOMAIN OF DYNEIN-C COMPND MOL_ID: 1; COMPND 2 MOLECULE: DYNEIN HEAVY CHAIN 9; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 2791-2942; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 3 ORGANISM_TAXID: 3055; SOURCE 4 GENE: DHC9; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX-TEV KEYWDS DYNEIN, MICROTUBULE-BINDING, STALK HEAD, MTBD, ANTIPARALLEL COILED KEYWDS 2 COIL, MOTOR PROTEIN, DSH EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.KATO,T.YAGI,S.OHKI,S.BURGESS,S.HONDA,R.KAMIYA,M.TANOKURA REVDAT 3 01-MAY-24 2RR7 1 REMARK SEQADV REVDAT 2 09-SEP-15 2RR7 1 JRNL VERSN REVDAT 1 08-JUN-11 2RR7 0 JRNL AUTH Y.S.KATO,T.YAGI,S.A.HARRIS,S.Y.OHKI,K.YURA,Y.SHIMIZU, JRNL AUTH 2 S.HONDA,R.KAMIYA,S.A.BURGESS,M.TANOKURA JRNL TITL STRUCTURE OF THE MICROTUBULE-BINDING DOMAIN OF FLAGELLAR JRNL TITL 2 DYNEIN JRNL REF STRUCTURE V. 22 1628 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 25450768 JRNL DOI 10.1016/J.STR.2014.08.021 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER, WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RR7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000150188. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.4 REMARK 210 IONIC STRENGTH : 1.42 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4 MM [U-15N] DYNEIN HEAVY REMARK 210 CHAIN 9 STALK HEAD-1, 90% H2O/10% REMARK 210 D2O; 0.4 MM [U-13C; U-15N] REMARK 210 DYNEIN HEAVY CHAIN 9 STALK HEAD- REMARK 210 2, 90% H2O/10% D2O; 0.4 MM [U- REMARK 210 13C; U-15N] DYNEIN HEAVY CHAIN 9 REMARK 210 STALK HEAD-3, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D C(CO)NH; 3D H(CCO) REMARK 210 NH; 3D HCCH-COSY; 3D HCCH-TOCSY; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY; REMARK 210 3D 1H-13C-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, NMRPIPE, SPARKY REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 56 -170.96 -69.78 REMARK 500 1 PHE A 113 11.00 -140.20 REMARK 500 1 GLU A 144 34.49 -163.19 REMARK 500 1 ARG A 153 41.42 39.05 REMARK 500 2 ALA A 57 -168.65 -112.65 REMARK 500 2 HIS A 95 43.55 -149.33 REMARK 500 2 GLU A 144 29.73 -159.25 REMARK 500 2 LYS A 151 98.01 -69.85 REMARK 500 2 ARG A 153 68.56 -105.19 REMARK 500 3 PRO A 56 -174.80 -69.76 REMARK 500 3 HIS A 95 45.33 -141.55 REMARK 500 3 GLU A 144 21.57 -141.72 REMARK 500 3 GLN A 150 40.16 -109.57 REMARK 500 3 LYS A 151 70.14 -106.53 REMARK 500 3 ARG A 153 75.57 -119.73 REMARK 500 4 HIS A 95 51.08 -174.96 REMARK 500 4 GLU A 144 12.83 -141.44 REMARK 500 4 GLU A 146 67.95 -119.85 REMARK 500 5 LEU A 23 -171.01 -61.78 REMARK 500 5 PRO A 56 -173.98 -69.80 REMARK 500 5 HIS A 95 49.24 -165.54 REMARK 500 5 GLU A 144 34.97 -161.69 REMARK 500 5 LYS A 148 59.50 -105.60 REMARK 500 5 ARG A 149 103.97 -49.85 REMARK 500 6 PRO A 56 -174.61 -69.78 REMARK 500 6 PHE A 113 10.54 -141.64 REMARK 500 6 GLU A 144 31.71 -162.06 REMARK 500 6 LYS A 151 90.51 -67.24 REMARK 500 6 LEU A 152 -76.21 -60.11 REMARK 500 6 ARG A 153 75.68 -153.60 REMARK 500 6 GLU A 154 105.24 -56.99 REMARK 500 7 LYS A 35 -71.52 -51.90 REMARK 500 7 PRO A 56 -179.74 -69.68 REMARK 500 7 GLU A 144 34.54 -160.31 REMARK 500 7 GLU A 146 64.76 -162.47 REMARK 500 7 LYS A 148 30.96 -174.08 REMARK 500 8 SER A 36 112.10 -161.28 REMARK 500 8 HIS A 95 39.99 -142.23 REMARK 500 8 GLU A 144 28.55 -158.58 REMARK 500 9 PRO A 56 -171.27 -69.71 REMARK 500 9 ALA A 57 -169.36 -110.20 REMARK 500 9 HIS A 95 45.76 -141.51 REMARK 500 9 GLN A 121 -60.72 -94.27 REMARK 500 9 GLU A 144 28.46 -158.95 REMARK 500 9 ARG A 149 -49.16 -138.86 REMARK 500 9 ARG A 153 -70.52 -63.59 REMARK 500 10 LEU A 23 -170.51 -63.95 REMARK 500 10 HIS A 95 41.54 -155.66 REMARK 500 10 GLU A 144 27.72 -144.09 REMARK 500 11 MET A 34 172.01 -53.08 REMARK 500 REMARK 500 THIS ENTRY HAS 113 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2RR7 A 4 155 UNP Q4AC22 Q4AC22_CHLRE 2791 2942 SEQADV 2RR7 GLY A 1 UNP Q4AC22 EXPRESSION TAG SEQADV 2RR7 SER A 2 UNP Q4AC22 EXPRESSION TAG SEQADV 2RR7 GLN A 3 UNP Q4AC22 EXPRESSION TAG SEQRES 1 A 155 GLY SER GLN ALA ASP LEU ALA GLU ALA LEU PRO LEU LEU SEQRES 2 A 155 GLU ALA ALA LEU LYS ALA LEU ASP THR LEU LYS PRO ALA SEQRES 3 A 155 ASP ILE THR GLU VAL LYS GLY MET LYS SER PRO PRO ALA SEQRES 4 A 155 GLY VAL ARG ARG VAL LEU GLU ALA ILE CYS ILE MET LYS SEQRES 5 A 155 GLY VAL LYS PRO ALA ARG VAL LYS ASP THR ALA SER GLY SEQRES 6 A 155 ARG MET VAL ASP ASP TYR TRP GLU ALA SER LYS LYS MET SEQRES 7 A 155 LEU MET GLU PHE ASP PHE LEU ASP SER LEU ARG LYS PHE SEQRES 8 A 155 ASP LYS ASP HIS ILE PRO PRO GLU VAL ILE VAL LYS ILE SEQRES 9 A 155 ARG PRO PHE ALA GLN ASP PRO GLU PHE GLN PRO LYS VAL SEQRES 10 A 155 ILE GLU LYS GLN SER VAL ALA CYS ALA GLY LEU CYS SER SEQRES 11 A 155 TRP VAL ILE ALA LEU GLU LYS TYR ASP LYS VAL ILE LYS SEQRES 12 A 155 GLU VAL GLU PRO LYS ARG GLN LYS LEU ARG GLU ALA HELIX 1 1 GLY A 1 LEU A 23 1 23 HELIX 2 2 LYS A 24 MET A 34 1 11 HELIX 3 3 GLY A 40 ILE A 50 1 11 HELIX 4 4 ASP A 70 MET A 80 1 11 HELIX 5 5 ASP A 83 PHE A 91 1 9 HELIX 6 6 ASP A 92 ILE A 96 5 5 HELIX 7 7 PRO A 97 VAL A 102 1 6 HELIX 8 8 GLN A 114 SER A 122 1 9 HELIX 9 9 CYS A 125 ILE A 142 1 18 SHEET 1 A 2 VAL A 59 LYS A 60 0 SHEET 2 A 2 MET A 67 VAL A 68 -1 O VAL A 68 N VAL A 59 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1