data_2RS8 # _entry.id 2RS8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RS8 pdb_00002rs8 10.2210/pdb2rs8/pdb RCSB RCSB150222 ? ? BMRB 11458 ? ? WWPDB D_1000150222 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2CPJ PDB . unspecified 11458 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2RS8 _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2011-11-29 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagata, T.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the N-terminal RNA recognition motif of NonO' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Nagata, T.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2RS8 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RS8 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Non-POU domain-containing octamer-binding protein' _entity.formula_weight 10909.416 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP RESIDUES 68-153' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NonO protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ LRVRFACHSASLTSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ LRVRFACHSASLTSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLY n 1 9 GLU n 1 10 LYS n 1 11 THR n 1 12 PHE n 1 13 THR n 1 14 GLN n 1 15 ARG n 1 16 SER n 1 17 ARG n 1 18 LEU n 1 19 PHE n 1 20 VAL n 1 21 GLY n 1 22 ASN n 1 23 LEU n 1 24 PRO n 1 25 PRO n 1 26 ASP n 1 27 ILE n 1 28 THR n 1 29 GLU n 1 30 GLU n 1 31 GLU n 1 32 MET n 1 33 ARG n 1 34 LYS n 1 35 LEU n 1 36 PHE n 1 37 GLU n 1 38 LYS n 1 39 TYR n 1 40 GLY n 1 41 LYS n 1 42 ALA n 1 43 GLY n 1 44 GLU n 1 45 VAL n 1 46 PHE n 1 47 ILE n 1 48 HIS n 1 49 LYS n 1 50 ASP n 1 51 LYS n 1 52 GLY n 1 53 PHE n 1 54 GLY n 1 55 PHE n 1 56 ILE n 1 57 ARG n 1 58 LEU n 1 59 GLU n 1 60 THR n 1 61 ARG n 1 62 THR n 1 63 LEU n 1 64 ALA n 1 65 GLU n 1 66 ILE n 1 67 ALA n 1 68 LYS n 1 69 VAL n 1 70 GLU n 1 71 LEU n 1 72 ASP n 1 73 ASN n 1 74 MET n 1 75 PRO n 1 76 LEU n 1 77 ARG n 1 78 GLY n 1 79 LYS n 1 80 GLN n 1 81 LEU n 1 82 ARG n 1 83 VAL n 1 84 ARG n 1 85 PHE n 1 86 ALA n 1 87 CYS n 1 88 HIS n 1 89 SER n 1 90 ALA n 1 91 SER n 1 92 LEU n 1 93 THR n 1 94 SER n 1 95 GLY n 1 96 PRO n 1 97 SER n 1 98 SER n 1 99 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Nono _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'cell-free protein synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NONO_MOUSE _struct_ref.pdbx_db_accession Q99K48 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFAC HSASLT ; _struct_ref.pdbx_align_begin 68 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2RS8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 93 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q99K48 _struct_ref_seq.db_align_beg 68 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 153 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 68 _struct_ref_seq.pdbx_auth_seq_align_end 153 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2RS8 GLY A 1 ? UNP Q99K48 ? ? 'expression tag' 61 1 1 2RS8 SER A 2 ? UNP Q99K48 ? ? 'expression tag' 62 2 1 2RS8 SER A 3 ? UNP Q99K48 ? ? 'expression tag' 63 3 1 2RS8 GLY A 4 ? UNP Q99K48 ? ? 'expression tag' 64 4 1 2RS8 SER A 5 ? UNP Q99K48 ? ? 'expression tag' 65 5 1 2RS8 SER A 6 ? UNP Q99K48 ? ? 'expression tag' 66 6 1 2RS8 GLY A 7 ? UNP Q99K48 ? ? 'expression tag' 67 7 1 2RS8 SER A 94 ? UNP Q99K48 ? ? 'expression tag' 154 8 1 2RS8 GLY A 95 ? UNP Q99K48 ? ? 'expression tag' 155 9 1 2RS8 PRO A 96 ? UNP Q99K48 ? ? 'expression tag' 156 10 1 2RS8 SER A 97 ? UNP Q99K48 ? ? 'expression tag' 157 11 1 2RS8 SER A 98 ? UNP Q99K48 ? ? 'expression tag' 158 12 1 2RS8 GLY A 99 ? UNP Q99K48 ? ? 'expression tag' 159 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D 1H-13C NOESY' 1 2 1 '3D 1H-15N NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;1.2 mM [U-100% 13C; U-100% 15N] entity-1, 20 mM [U-100% 2H] TRIS-2, 1 mM DTT-3, 100 mM sodium chloride-4, 0.02 % sodium azide-5, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2RS8 _pdbx_nmr_refine.method 'simulated annealing, torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2RS8 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2RS8 _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Kollm' refinement Amber 1 ? ? refinement CYANA 2 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2RS8 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2RS8 _struct.title 'Solution structure of the N-terminal RNA recognition motif of NonO' _struct.pdbx_model_details 'fewest violations, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RS8 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;RRM, RBD, RNP, TRANSCRIPTION, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 28 ? PHE A 36 ? THR A 88 PHE A 96 1 ? 9 HELX_P HELX_P2 2 GLU A 37 ? GLY A 40 ? GLU A 97 GLY A 100 5 ? 4 HELX_P HELX_P3 3 THR A 60 ? ASP A 72 ? THR A 120 ASP A 132 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 44 ? HIS A 48 ? GLU A 104 HIS A 108 A 2 PHE A 53 ? ARG A 57 ? PHE A 113 ARG A 117 A 3 ARG A 17 ? GLY A 21 ? ARG A 77 GLY A 81 A 4 ARG A 82 ? PHE A 85 ? ARG A 142 PHE A 145 B 1 PRO A 75 ? LEU A 76 ? PRO A 135 LEU A 136 B 2 LYS A 79 ? GLN A 80 ? LYS A 139 GLN A 140 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 48 ? N HIS A 108 O PHE A 53 ? O PHE A 113 A 2 3 O ILE A 56 ? O ILE A 116 N LEU A 18 ? N LEU A 78 A 3 4 N PHE A 19 ? N PHE A 79 O ARG A 84 ? O ARG A 144 B 1 2 N LEU A 76 ? N LEU A 136 O LYS A 79 ? O LYS A 139 # _atom_sites.entry_id 2RS8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 61 58 GLY GLY A . n A 1 2 SER 2 62 59 SER SER A . n A 1 3 SER 3 63 60 SER SER A . n A 1 4 GLY 4 64 61 GLY GLY A . n A 1 5 SER 5 65 62 SER SER A . n A 1 6 SER 6 66 63 SER SER A . n A 1 7 GLY 7 67 64 GLY GLY A . n A 1 8 GLY 8 68 65 GLY GLY A . n A 1 9 GLU 9 69 66 GLU GLU A . n A 1 10 LYS 10 70 67 LYS LYS A . n A 1 11 THR 11 71 68 THR THR A . n A 1 12 PHE 12 72 69 PHE PHE A . n A 1 13 THR 13 73 70 THR THR A . n A 1 14 GLN 14 74 71 GLN GLN A . n A 1 15 ARG 15 75 72 ARG ARG A . n A 1 16 SER 16 76 73 SER SER A . n A 1 17 ARG 17 77 74 ARG ARG A . n A 1 18 LEU 18 78 75 LEU LEU A . n A 1 19 PHE 19 79 76 PHE PHE A . n A 1 20 VAL 20 80 77 VAL VAL A . n A 1 21 GLY 21 81 78 GLY GLY A . n A 1 22 ASN 22 82 79 ASN ASN A . n A 1 23 LEU 23 83 80 LEU LEU A . n A 1 24 PRO 24 84 81 PRO PRO A . n A 1 25 PRO 25 85 82 PRO PRO A . n A 1 26 ASP 26 86 83 ASP ASP A . n A 1 27 ILE 27 87 84 ILE ILE A . n A 1 28 THR 28 88 85 THR THR A . n A 1 29 GLU 29 89 86 GLU GLU A . n A 1 30 GLU 30 90 87 GLU GLU A . n A 1 31 GLU 31 91 88 GLU GLU A . n A 1 32 MET 32 92 89 MET MET A . n A 1 33 ARG 33 93 90 ARG ARG A . n A 1 34 LYS 34 94 91 LYS LYS A . n A 1 35 LEU 35 95 92 LEU LEU A . n A 1 36 PHE 36 96 93 PHE PHE A . n A 1 37 GLU 37 97 94 GLU GLU A . n A 1 38 LYS 38 98 95 LYS LYS A . n A 1 39 TYR 39 99 96 TYR TYR A . n A 1 40 GLY 40 100 97 GLY GLY A . n A 1 41 LYS 41 101 98 LYS LYS A . n A 1 42 ALA 42 102 99 ALA ALA A . n A 1 43 GLY 43 103 100 GLY GLY A . n A 1 44 GLU 44 104 101 GLU GLU A . n A 1 45 VAL 45 105 102 VAL VAL A . n A 1 46 PHE 46 106 103 PHE PHE A . n A 1 47 ILE 47 107 104 ILE ILE A . n A 1 48 HIS 48 108 105 HIS HIS A . n A 1 49 LYS 49 109 106 LYS LYS A . n A 1 50 ASP 50 110 107 ASP ASP A . n A 1 51 LYS 51 111 108 LYS LYS A . n A 1 52 GLY 52 112 109 GLY GLY A . n A 1 53 PHE 53 113 110 PHE PHE A . n A 1 54 GLY 54 114 111 GLY GLY A . n A 1 55 PHE 55 115 112 PHE PHE A . n A 1 56 ILE 56 116 113 ILE ILE A . n A 1 57 ARG 57 117 114 ARG ARG A . n A 1 58 LEU 58 118 115 LEU LEU A . n A 1 59 GLU 59 119 116 GLU GLU A . n A 1 60 THR 60 120 117 THR THR A . n A 1 61 ARG 61 121 118 ARG ARG A . n A 1 62 THR 62 122 119 THR THR A . n A 1 63 LEU 63 123 120 LEU LEU A . n A 1 64 ALA 64 124 121 ALA ALA A . n A 1 65 GLU 65 125 122 GLU GLU A . n A 1 66 ILE 66 126 123 ILE ILE A . n A 1 67 ALA 67 127 124 ALA ALA A . n A 1 68 LYS 68 128 125 LYS LYS A . n A 1 69 VAL 69 129 126 VAL VAL A . n A 1 70 GLU 70 130 127 GLU GLU A . n A 1 71 LEU 71 131 128 LEU LEU A . n A 1 72 ASP 72 132 129 ASP ASP A . n A 1 73 ASN 73 133 130 ASN ASN A . n A 1 74 MET 74 134 131 MET MET A . n A 1 75 PRO 75 135 132 PRO PRO A . n A 1 76 LEU 76 136 133 LEU LEU A . n A 1 77 ARG 77 137 134 ARG ARG A . n A 1 78 GLY 78 138 135 GLY GLY A . n A 1 79 LYS 79 139 136 LYS LYS A . n A 1 80 GLN 80 140 137 GLN GLN A . n A 1 81 LEU 81 141 138 LEU LEU A . n A 1 82 ARG 82 142 139 ARG ARG A . n A 1 83 VAL 83 143 140 VAL VAL A . n A 1 84 ARG 84 144 141 ARG ARG A . n A 1 85 PHE 85 145 142 PHE PHE A . n A 1 86 ALA 86 146 143 ALA ALA A . n A 1 87 CYS 87 147 144 CYS CYS A . n A 1 88 HIS 88 148 145 HIS HIS A . n A 1 89 SER 89 149 146 SER SER A . n A 1 90 ALA 90 150 147 ALA ALA A . n A 1 91 SER 91 151 148 SER SER A . n A 1 92 LEU 92 152 149 LEU LEU A . n A 1 93 THR 93 153 150 THR THR A . n A 1 94 SER 94 154 151 SER SER A . n A 1 95 GLY 95 155 152 GLY GLY A . n A 1 96 PRO 96 156 153 PRO PRO A . n A 1 97 SER 97 157 154 SER SER A . n A 1 98 SER 98 158 155 SER SER A . n A 1 99 GLY 99 159 156 GLY GLY A . n # _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center RSGI _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-19 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software 4 2 'Structure model' pdbx_nmr_spectrometer 5 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' 5 2 'Structure model' '_pdbx_nmr_spectrometer.model' 6 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity-1 1.2 ? mM '[U-100% 13C; U-100% 15N]' 1 TRIS-2 20 ? mM '[U-100% 2H]' 1 DTT-3 1 ? mM ? 1 'sodium chloride-4' 100 ? mM ? 1 'sodium azide-5' 0.02 ? % ? 1 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 2 NE A ARG 77 ? ? CZ A ARG 77 ? ? NH1 A ARG 77 ? ? 123.40 120.30 3.10 0.50 N 2 2 NE A ARG 77 ? ? CZ A ARG 77 ? ? NH2 A ARG 77 ? ? 117.28 120.30 -3.02 0.50 N 3 2 NE A ARG 137 ? ? CZ A ARG 137 ? ? NH1 A ARG 137 ? ? 123.55 120.30 3.25 0.50 N 4 3 NE A ARG 77 ? ? CZ A ARG 77 ? ? NH1 A ARG 77 ? ? 123.47 120.30 3.17 0.50 N 5 4 NE A ARG 142 ? ? CZ A ARG 142 ? ? NH1 A ARG 142 ? ? 123.39 120.30 3.09 0.50 N 6 8 NE A ARG 117 ? ? CZ A ARG 117 ? ? NH1 A ARG 117 ? ? 123.64 120.30 3.34 0.50 N 7 17 NE A ARG 93 ? ? CZ A ARG 93 ? ? NH1 A ARG 93 ? ? 123.34 120.30 3.04 0.50 N 8 18 NE A ARG 117 ? ? CZ A ARG 117 ? ? NH1 A ARG 117 ? ? 123.83 120.30 3.53 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 76 ? ? -78.54 34.60 2 1 HIS A 148 ? ? -155.97 -48.40 3 2 SER A 76 ? ? -79.46 25.84 4 2 LEU A 152 ? ? -105.41 66.40 5 3 SER A 76 ? ? -72.25 36.20 6 3 ASN A 133 ? ? 55.15 18.99 7 3 SER A 149 ? ? -156.38 -47.09 8 4 SER A 65 ? ? -166.67 -159.70 9 4 GLU A 69 ? ? 55.95 11.81 10 4 CYS A 147 ? ? -86.17 34.77 11 4 LEU A 152 ? ? -155.93 32.74 12 5 SER A 149 ? ? -151.50 82.82 13 5 SER A 151 ? ? -76.60 30.66 14 6 PHE A 72 ? ? -82.37 39.00 15 6 SER A 151 ? ? 54.86 11.87 16 6 PRO A 156 ? ? -80.00 36.35 17 7 GLN A 74 ? ? -101.35 73.46 18 8 SER A 76 ? ? -86.17 39.82 19 9 SER A 76 ? ? -81.84 33.63 20 10 THR A 153 ? ? 71.13 -4.88 21 11 SER A 63 ? ? -81.51 46.34 22 12 SER A 76 ? ? -75.13 40.18 23 12 ALA A 146 ? ? -79.51 42.97 24 12 SER A 149 ? ? -114.28 60.78 25 13 SER A 76 ? ? -86.47 41.38 26 14 GLN A 74 ? ? -91.08 45.06 27 14 ARG A 75 ? ? -75.30 37.82 28 14 SER A 76 ? ? -78.79 36.33 29 14 ARG A 137 ? ? 59.03 18.88 30 15 SER A 63 ? ? 69.01 -5.64 31 15 LYS A 70 ? ? -93.06 33.85 32 15 SER A 76 ? ? 49.61 29.13 33 16 ASP A 86 ? ? -140.43 19.00 34 17 ALA A 150 ? ? -161.34 113.65 35 18 SER A 63 ? ? -169.15 -165.18 36 19 ASN A 133 ? ? 58.49 17.81 37 19 ALA A 150 ? ? -80.85 45.54 38 20 ALA A 146 ? ? -97.97 53.63 39 20 SER A 158 ? ? 67.49 -0.71 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR A 99 ? ? 0.076 'SIDE CHAIN' 2 4 TYR A 99 ? ? 0.068 'SIDE CHAIN' 3 19 TYR A 99 ? ? 0.069 'SIDE CHAIN' 4 20 TYR A 99 ? ? 0.076 'SIDE CHAIN' #