HEADER TRANSPORT PROTEIN 12-NOV-14 2RUP TITLE SOLUTION STRUCTURE OF RAT P2X4 RECEPTOR HEAD DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: P2X PURINOCEPTOR 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 111-167; COMPND 5 SYNONYM: P2X4, ATP RECEPTOR, PURINERGIC RECEPTOR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: BROWN RAT,RAT,RATS; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: P2RX4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-22B(+) KEYWDS P2X4 RECEPTOR, HEAD DOMAIN, CANION TRANSPORT, METAL ION BINDING, KEYWDS 2 TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.ABE,T.IGAWA,M.TSUDA,K.INOUE,T.UEDA REVDAT 4 14-JUN-23 2RUP 1 REMARK REVDAT 3 11-DEC-19 2RUP 1 REMARK SEQADV SSBOND REVDAT 2 17-OCT-18 2RUP 1 JRNL REVDAT 1 04-FEB-15 2RUP 0 JRNL AUTH T.IGAWA,Y.ABE,M.TSUDA,K.INOUE,T.UEDA JRNL TITL SOLUTION STRUCTURE OF THE RAT P2X4 RECEPTOR HEAD DOMAIN JRNL TITL 2 INVOLVED IN INHIBITORY METAL BINDING JRNL REF FEBS LETT. V. 589 680 2015 JRNL REFN ISSN 1873-3468 JRNL PMID 25662851 JRNL DOI 10.1016/J.FEBSLET.2015.01.034 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA REMARK 3 AUTHORS : G NTERT P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RUP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000150289. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 297 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-99% 13C; U-99% 15N] REMARK 210 ENTITY-1, 50 MM UREA-2, 10 MM REMARK 210 SODIUM ACETATE-3, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D CBCA(CO)NH; 3D C(CO) REMARK 210 NH; 3D HNCO; 3D HNCA; 3D HNCACB; REMARK 210 3D HN(CO)CA; 3D H(CCO)NH; 3D 1H- REMARK 210 15N NOESY; 3D 1H-15N TOCSY; 3D REMARK 210 HCCH-TOCSY; 3D HCCH-COSY; 3D 1H- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 134 -170.87 -69.73 REMARK 500 1 SER A 136 112.86 -165.44 REMARK 500 1 PRO A 151 87.66 -69.75 REMARK 500 1 ASN A 153 -169.47 -107.98 REMARK 500 2 PRO A 134 -171.29 -69.78 REMARK 500 2 SER A 136 81.71 51.47 REMARK 500 2 PRO A 151 89.65 -69.77 REMARK 500 2 ASN A 153 -169.46 -106.59 REMARK 500 2 PRO A 166 87.30 -69.74 REMARK 500 3 PRO A 134 -170.56 -69.78 REMARK 500 3 VAL A 137 104.28 -51.61 REMARK 500 3 PRO A 151 89.40 -69.77 REMARK 500 4 GLU A 118 173.59 -53.58 REMARK 500 4 PRO A 134 -170.74 -69.72 REMARK 500 4 VAL A 137 102.84 -51.76 REMARK 500 4 PRO A 151 85.13 -69.80 REMARK 500 4 PRO A 166 99.63 -69.79 REMARK 500 5 PRO A 134 -170.87 -69.77 REMARK 500 5 SER A 136 78.73 51.70 REMARK 500 5 PRO A 151 88.55 -69.76 REMARK 500 5 ASN A 153 -169.59 -107.49 REMARK 500 6 ASN A 153 -75.12 -113.98 REMARK 500 6 GLU A 154 -69.96 -159.51 REMARK 500 7 GLU A 118 177.39 -55.89 REMARK 500 7 PRO A 134 -170.64 -69.74 REMARK 500 7 PRO A 151 84.46 -69.75 REMARK 500 7 ASN A 153 -169.55 -102.34 REMARK 500 8 PRO A 151 90.67 -69.74 REMARK 500 9 PRO A 134 -171.02 -69.76 REMARK 500 9 SER A 136 113.70 -162.51 REMARK 500 9 PRO A 151 90.60 -69.75 REMARK 500 9 PRO A 166 -178.96 -69.78 REMARK 500 10 PRO A 134 -170.56 -69.76 REMARK 500 10 VAL A 137 96.69 -59.75 REMARK 500 10 PRO A 151 84.87 -69.75 REMARK 500 10 ASN A 153 -169.72 -105.96 REMARK 500 11 GLU A 118 179.91 -56.89 REMARK 500 11 SER A 136 -169.79 -179.51 REMARK 500 11 PRO A 151 84.74 -69.83 REMARK 500 12 PRO A 134 -170.72 -69.79 REMARK 500 12 PRO A 151 90.32 -69.73 REMARK 500 12 ASN A 153 -169.26 -111.05 REMARK 500 13 PRO A 134 -170.26 -69.83 REMARK 500 13 VAL A 137 104.79 -50.97 REMARK 500 13 PRO A 151 84.45 -69.77 REMARK 500 13 PRO A 166 -174.93 -69.78 REMARK 500 14 CYS A 116 156.76 179.30 REMARK 500 14 PRO A 134 -170.19 -69.82 REMARK 500 14 PRO A 151 92.95 -69.75 REMARK 500 15 PRO A 134 -171.06 -69.74 REMARK 500 REMARK 500 THIS ENTRY HAS 69 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 11583 RELATED DB: BMRB DBREF 2RUP A 111 167 UNP P51577 P2RX4_RAT 111 167 SEQADV 2RUP MET A 110 UNP P51577 EXPRESSION TAG SEQRES 1 A 58 MET GLN THR GLN SER THR CYS PRO GLU ILE PRO ASP LYS SEQRES 2 A 58 THR SER ILE CYS ASN SER ASP ALA ASP CYS THR PRO GLY SEQRES 3 A 58 SER VAL ASP THR HIS SER SER GLY VAL ALA THR GLY ARG SEQRES 4 A 58 CYS VAL PRO PHE ASN GLU SER VAL LYS THR CYS GLU VAL SEQRES 5 A 58 ALA ALA TRP CYS PRO VAL SHEET 1 A 3 SER A 114 PRO A 117 0 SHEET 2 A 3 THR A 158 ALA A 163 -1 O VAL A 161 N CYS A 116 SHEET 3 A 3 VAL A 144 VAL A 150 -1 N THR A 146 O GLU A 160 SSBOND 1 CYS A 116 CYS A 165 1555 1555 2.00 SSBOND 2 CYS A 126 CYS A 149 1555 1555 2.12 SSBOND 3 CYS A 132 CYS A 159 1555 1555 1.95 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1