HEADER DE NOVO PROTEIN 14-JUL-15 2RVD TITLE NMR STRUCTURE OF A MUTANT OF CHIGNOLIN, CLN025 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLN025; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS BETA-HAIRPIN, MINI-PROTEIN, CHIGNOLIN, DE NOVO PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.KATO,M.ISHIMURA,S.HONDA REVDAT 2 14-JUN-23 2RVD 1 REMARK REVDAT 1 12-AUG-15 2RVD 0 JRNL AUTH S.HONDA,T.AKIBA,Y.S.KATO,Y.SAWADA,M.SEKIJIMA,M.ISHIMURA, JRNL AUTH 2 A.OOISHI,H.WATANABE,T.ODAHARA,K.HARATA JRNL TITL CRYSTAL STRUCTURE OF A TEN-AMINO ACID PROTEIN JRNL REF J.AM.CHEM.SOC. V. 130 15327 2008 JRNL REFN ISSN 0002-7863 JRNL PMID 18950166 JRNL DOI 10.1021/JA8030533 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.HONDA,K.YAMASAKI,Y.SAWADA,H.MORII REMARK 1 TITL 10 RESIDUE FOLDED PEPTIDE DESIGNED BY SEGMENT STATISTICS REMARK 1 REF STRUCTURE V. 12 1507 2004 REMARK 1 REFN ISSN 0969-2126 REMARK 1 PMID 15296744 REMARK 1 DOI 10.1016/J.STR.2004.05.022 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CYANA REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2RVD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000150312. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.7 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-1H ROESY; REMARK 210 2D 1H-1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY 3, CYANA 2.1, REMARK 210 PROCHECKNMR, VNMR REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 3 73.36 -113.81 REMARK 500 1 TRP A 9 97.17 -68.81 REMARK 500 2 ASP A 3 73.31 -114.29 REMARK 500 3 ASP A 3 73.38 -113.87 REMARK 500 4 ASP A 3 72.85 -114.13 REMARK 500 4 THR A 6 -60.97 -107.83 REMARK 500 5 ASP A 3 72.93 -114.08 REMARK 500 5 THR A 6 -70.13 -104.34 REMARK 500 6 ASP A 3 72.83 -114.14 REMARK 500 7 ASP A 3 73.11 -116.97 REMARK 500 7 THR A 6 -63.37 -123.45 REMARK 500 8 ASP A 3 73.29 -116.81 REMARK 500 8 THR A 6 -61.56 -124.88 REMARK 500 9 THR A 6 -61.89 -103.89 REMARK 500 9 THR A 8 118.81 -160.52 REMARK 500 10 ASP A 3 73.40 -113.99 REMARK 500 11 ASP A 3 73.34 -114.56 REMARK 500 12 ASP A 3 72.91 -114.34 REMARK 500 13 ASP A 3 73.34 -113.97 REMARK 500 14 ASP A 3 73.30 -113.97 REMARK 500 15 ASP A 3 73.36 -113.89 REMARK 500 16 ASP A 3 72.94 -114.54 REMARK 500 16 THR A 6 -67.02 -123.72 REMARK 500 17 ASP A 3 73.29 -114.26 REMARK 500 18 ASP A 3 73.36 -113.81 REMARK 500 19 ASP A 3 73.64 -113.78 REMARK 500 19 THR A 6 -67.28 -108.15 REMARK 500 20 ASP A 3 74.49 -113.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 20009 RELATED DB: BMRB REMARK 900 NMR STRUCTURE OF A MUTANT OF CHIGNOLIN, CLN025 REMARK 900 RELATED ID: 1UAO RELATED DB: PDB REMARK 900 NMR STRUCTURE OF DESIGNED PROTEIN, CHIGNOLIN, CONSISTING OF ONLY REMARK 900 TEN AMINO ACIDS REMARK 900 RELATED ID: 5AWL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A MUTANT OF CHIGNOLIN, CLN025 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THIS PROTEIN WAS NOT AVAILABLE AT THE UNIPROT REMARK 999 KNOWLEDGEBASE DATABASE (UNIPROTKB) AT THE TIME OF DEPOSITION. DBREF 2RVD A 1 10 PDB 2RVD 2RVD 1 10 SEQRES 1 A 10 TYR TYR ASP PRO GLU THR GLY THR TRP TYR CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1