HEADER VIRUS 08-JUN-84 2STV OBSLTE 23-AUG-05 2STV 2BUK TITLE THE STRUCTURE OF SATELLITE TOBACCO NECROSIS VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SATELLITE TOBACCO NECROSIS VIRUS; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS VIRUS EXPDTA X-RAY DIFFRACTION AUTHOR T.A.JONES,L.LILJAS REVDAT 7 23-AUG-05 2STV 1 OBSLTE REVDAT 6 15-JAN-91 2STV 1 REMARK REVDAT 5 19-APR-89 2STV 3 CRYST1 REVDAT 4 09-OCT-88 2STV 1 FORMUL REVDAT 3 29-OCT-85 2STV 1 REMARK REVDAT 2 24-OCT-84 2STV 1 REMARK REVDAT 1 18-JUL-84 2STV 0 JRNL AUTH L.LILJAS,B.STRANDBERG JRNL TITL THE STRUCTURE OF SATELLITE TOBACCO NECROSIS VIRUS JRNL EDIT F.A.JURNAK, A.MCPHERSON JRNL REF BIOLOGICAL MACROMOLECULES V. 1 97 1984 JRNL REF 2 AND ASSEMBLIES JRNL PUBL JOHN WILEY AND SONS, NEW YORK JRNL REFN US ISSN 0-471-85142-6 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.A.JONES,L.LILJAS REMARK 1 TITL STRUCTURE OF SATELLITE TOBACCO NECROSIS VIRUS REMARK 1 TITL 2 AFTER CRYSTALLOGRAPHIC REFINEMENT AT 2.5 ANGSTROMS REMARK 1 TITL 3 RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 177 735 1984 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH T.A.JONES,L.LILJAS REMARK 1 TITL CRYSTALLOGRAPHIC REFINEMENT OF MACROMOLECULES REMARK 1 TITL 2 HAVING NON-CRYSTALLOGRAPHIC SYMMETRY REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 40 50 1984 REMARK 1 REFN ASTM ACACBN DK ISSN 0567-7394 REMARK 1 REFERENCE 3 REMARK 1 AUTH L.LILJAS,T.UNGE,T.A.JONES,K.FRIDBORG,S.LOVGREN, REMARK 1 AUTH 2 U.SKOGLUND,B.STRANDBERG REMARK 1 TITL STRUCTURE OF SATELLITE TOBACCO NECROSIS VIRUS AT REMARK 1 TITL 2 3.0 ANGSTROMS RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 159 93 1982 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 4 REMARK 1 AUTH T.UNGE,L.LILJAS,B.STRANDBERG,I.VAARA,K.K.KANNAN, REMARK 1 AUTH 2 K.FRIDBORG,C.E.NORDMAN,P.J.LENTZJUNIOR REMARK 1 TITL SATELLITE TOBACO NECROSIS VIRUS STRUCTURE AT 4.0 REMARK 1 TITL 2 ANGSTROMS RESOLUTION REMARK 1 REF NATURE V. 285 373 1980 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REFERENCE 5 REMARK 1 AUTH P.J.LENTZJUNIOR,B.STRANDBERG,T.UNGE,I.VAARA, REMARK 1 AUTH 2 A.BORELL,K.FRIDBORG,G.PETEF REMARK 1 TITL THE DETERMINATION OF THE HEAVY-ATOM SUBSTITUTION REMARK 1 TITL 2 SITES IN THE SATELLITE TOBACCO NECROSIS VIRUS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.B V. 32 2979 1976 REMARK 1 REFN ASTM ACBCAR DK ISSN 0567-7408 REMARK 1 REFERENCE 6 REMARK 1 AUTH P.J.LENTZJUNIOR,B.STRANDBERG REMARK 1 TITL INTERPRETATION OF THE 10 ANGSTROMS ROTATION REMARK 1 TITL 2 FUNCTION OF THE SATELLITE TOBACCO NECROSIS VIRUS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 30 552 1974 REMARK 1 REFN ASTM ACACBN DK ISSN 0567-7394 REMARK 1 REFERENCE 7 REMARK 1 AUTH M.G.ROSSMANN,K.AKERVALL,P.LENTZJUNIOR,B.STRANDBERG REMARK 1 TITL X-RAY STUDIES OF THE SATELLITE TOBACCO NECROSIS REMARK 1 TITL 2 VIRUS. POSITION OF THE VIRUS PARTICLE IN THE REMARK 1 TITL 3 CRYSTALLOGRAPHIC CELL REMARK 1 REF J.MOL.BIOL. V. 79 197 1973 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 8 REMARK 1 AUTH K.AKERVALL,B.STRANDBERG,M.G.ROSSMANN,U.BENGTSSON, REMARK 1 AUTH 2 K.FRIDBORG,H.JOHANNISEN,K.K.KANNAN,S.LOVGREN, REMARK 1 AUTH 3 G.PETEF,B.OBERG,D.EAKER,S.HJERTEN,L.RYDEN,I.MORING REMARK 1 TITL X-RAY DIFFRACTION STUDIES OF THE STRUCTURE OF REMARK 1 TITL 2 SATELLITE TOBACCO NECROSIS VIRUS REMARK 1 REF COLD SPRING HARBOR SYMP. V. 36 469 1972 REMARK 1 REF 2 QUANT.BIOL. REMARK 1 REFN ASTM CSHSAZ US ISSN 0091-7451 REMARK 1 REFERENCE 9 REMARK 1 AUTH K.AKERVALL,B.STRANDBERG REMARK 1 TITL X-RAY DIFFRACTION STUDIES OF THE SATELLITE TOBACCO REMARK 1 TITL 2 NECROSIS VIRUS. III. A NEW CRYSTAL MOUNTING METHOD REMARK 1 TITL 3 ALLOWING PHOTOGRAPHIC RECORDING OF 3 ANGSTROMS REMARK 1 TITL 4 DIFFRACTION DATA REMARK 1 REF J.MOL.BIOL. V. 62 625 1971 REMARK 1 REFN ASTM JMOBAK UK ISSN 0022-2836 REMARK 1 REFERENCE 10 REMARK 1 AUTH K.FRIDBORG,S.HJERTEN,S.HOGLUND,A.LILJAS, REMARK 1 AUTH 2 B.K.S.LUNDBERG,P.OXELFELT,L.PHILIPSON,B.STRANDBERG REMARK 1 TITL PURIFICATION, ELECTRON MICROSCOPY, AND X-RAY REMARK 1 TITL 2 DIFFRACTION STUDIES OF THE SATELLITE TOBACCO REMARK 1 TITL 3 NECROSIS VIRUS REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 54 513 1965 REMARK 1 REFN ASTM PNASA6 US ISSN 0027-8424 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REAL-SPACE REFINEMENT REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1427 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 158 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2STV COMPLIES WITH FORMAT V. 3.0, 1-DEC-2006 REMARK 4 REMARK 4 THIS FILE IS A TEST VERSION. REMARK 4 REMARK 4 THIS IS THE REMEDIATED VERSION OF THIS PDB ENTRY. REMARK 4 REMEDIATED DATA FILE REVISION 3.100 (2007-03-19) REMARK 5 REMARK 5 THE VIRUS PARTICLE HAS A SHELL OF 60 PROTEIN SUBUNITS REMARK 5 ARRANGED WITH T=1 ICOSAHEDRAL SYMMETRY. TO GENERATE THE REMARK 5 COMPLETE SHELL FROM THE COORDINATES FOR ONE SUBUNIT WHICH REMARK 5 IS GIVEN IN THIS ENTRY REQUIRES APPLYING THE 532 POINT REMARK 5 GROUP SYMMETRY ELEMENTS IN THE SPECIFIC ORDER 3,2,5,2 REMARK 5 ABOUT SPECIFIC AXES. THE 59 *MTRIX* RECORDS GIVEN BELOW REMARK 5 WILL GENERATE THE OTHER SUBUNITS TO MAKE THE ICOSAHEDRAL REMARK 5 SHELL FROM THE DEPOSITED COORDINATES. REMARK 6 REMARK 6 RESIDUES 1 TO 11 ARE NOT DEFINED IN THE DENSITY MAPS AND REMARK 6 THEREFORE ARE NOT INCLUDED. REMARK 7 REMARK 7 IN EACH SUBUNIT, ONE CALCIUM ION AND SEVERAL WATER REMARK 7 MOLECULES ARE LOCATED IN A SPECIAL ICOSAHEDRAL SYMMETRY REMARK 7 POSITION. REMARK 8 REMARK 8 NO DENSITY WAS OBSERVED FOR CERTAIN ATOMS. THESE ATOMS REMARK 8 WERE ASSIGNED A TEMPERATURE FACTOR OF 100.00 ON THE ATOM REMARK 8 RECORDS BELOW. REMARK 9 REMARK 9 CORRECTION. UPDATE REFERENCE 2 TO REFLECT PUBLICATION. REMARK 9 24-OCT-84. REMARK 10 REMARK 10 CORRECTION. UPDATE REFERENCE 1 TO REFLECT PUBLICATION. REMARK 10 29-OCT-85. REMARK 11 REMARK 11 CORRECTION. CORRECT FORMAT OF FORMUL RECORDS. 09-OCT-88. REMARK 12 REMARK 12 CORRECTION. CORRECT FORMAT OF SPACE GROUP ON CRYST1 RECORD. REMARK 12 19-APR-89. REMARK 13 REMARK 13 CORRECTION. CORRECT VOLUME NUMBER FOR REFERENCE 1. REMARK 13 15-JAN-91. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 1/2+X,1/2+Y,Z REMARK 290 4555 1/2-X,1/2+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.629846 0.200380 -0.750509 0.00000 REMARK 290 SMTRY2 2 0.200279 -0.891581 -0.406078 0.00000 REMARK 290 SMTRY3 2 -0.750373 -0.406209 0.521427 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 204.24222 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 -19.17538 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 -78.66350 REMARK 290 SMTRY1 4 -0.629846 0.200380 -0.750509 204.24222 REMARK 290 SMTRY2 4 0.200279 -0.891581 -0.406078 -19.17538 REMARK 290 SMTRY3 4 -0.750373 -0.406209 0.521427 -78.66350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR REMARK 300 INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 LYS A 2 REMARK 465 GLN A 3 REMARK 465 GLN A 4 REMARK 465 ASN A 5 REMARK 465 ASN A 6 REMARK 465 ARG A 7 REMARK 465 ARG A 8 REMARK 465 LYS A 9 REMARK 465 SER A 10 REMARK 465 ALA A 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 OD2 ASP A 55 CA CA 2 1.49 REMARK 500 O HOH 138 O HOH 139 1.97 REMARK 500 O HOH 149 O HOH 183 1.98 REMARK 500 OG SER A 34 O HOH 11 2.01 REMARK 500 OE1 GLN A 152 O HOH 27 2.04 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 13 CA MET A 13 CB 0.201 REMARK 500 MET A 13 CB MET A 13 CG 0.098 REMARK 500 CYS A 135 CA CYS A 135 CB 0.124 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 80 -54.91 74.52 DBREF 2STV A 1 195 UNP P03606 COAT_STNV1 2 196 SEQRES 1 A 195 ALA LYS GLN GLN ASN ASN ARG ARG LYS SER ALA THR MET SEQRES 2 A 195 ARG ALA VAL LYS ARG MET ILE ASN THR HIS LEU GLU HIS SEQRES 3 A 195 LYS ARG PHE ALA LEU ILE ASN SER GLY ASN THR ASN ALA SEQRES 4 A 195 THR ALA GLY THR VAL GLN ASN LEU SER ASN GLY ILE ILE SEQRES 5 A 195 GLN GLY ASP ASP ILE ASN GLN ARG SER GLY ASP GLN VAL SEQRES 6 A 195 ARG ILE VAL SER HIS LYS LEU HIS VAL ARG GLY THR ALA SEQRES 7 A 195 ILE THR VAL SER GLN THR PHE ARG PHE ILE TRP PHE ARG SEQRES 8 A 195 ASP ASN MET ASN ARG GLY THR THR PRO THR VAL LEU GLU SEQRES 9 A 195 VAL LEU ASN THR ALA ASN PHE MET SER GLN TYR ASN PRO SEQRES 10 A 195 ILE THR LEU GLN GLN LYS ARG PHE THR ILE LEU LYS ASP SEQRES 11 A 195 VAL THR LEU ASN CYS SER LEU THR GLY GLU SER ILE LYS SEQRES 12 A 195 ASP ARG ILE ILE ASN LEU PRO GLY GLN LEU VAL ASN TYR SEQRES 13 A 195 ASN GLY ALA THR ALA VAL ALA ALA SER ASN GLY PRO GLY SEQRES 14 A 195 ALA ILE PHE MET LEU GLN ILE GLY ASP SER LEU VAL GLY SEQRES 15 A 195 LEU TRP ASP SER SER TYR GLU ALA VAL TYR THR ASP ALA FTNOTE 1 NO DENSITY WAS OBSERVED FOR THIS ATOM. SEE REMARK 8. HET CA 1 1 HET CA 2 1 HET CA 3 1 HETNAM CA CALCIUM ION FORMUL 2 CA 3(CA 2+) FORMUL 5 HOH *158(H2 O) HELIX 1 R THR A 12 LEU A 24 1MIXED ALPHA AND 3(10) HELIX 13 HELIX 2 B1 VAL A 102 LEU A 106 1 5 HELIX 3 B2 ASN A 116 LEU A 120 1 5 HELIX 4 D VAL A 162 ASN A 166 5 5 SHEET 1 S1 4 LYS A 27 ASN A 38 0 SHEET 2 S1 4 GLY A 182 THR A 193 -1 O GLY A 182 N ASN A 38 SHEET 3 S1 4 ASP A 63 ALA A 78 -1 N ARG A 66 O THR A 193 SHEET 4 S1 4 SER A 141 TYR A 156 -1 O SER A 141 N ALA A 78 SHEET 1 S2 4 THR A 43 LEU A 47 0 SHEET 2 S2 4 GLY A 169 ILE A 176 -1 O GLN A 175 N THR A 43 SHEET 3 S2 4 GLN A 83 ASN A 93 -1 SHEET 4 S2 4 ARG A 124 CYS A 135 -1 O ARG A 124 N ASN A 93 TURN 1 T1 ILE A 79 VAL A 81 GAMMA-BEND TURN 2 T2 THR A 160 VAL A 162 GAMMA-BEND CRYST1 317.270 304.030 184.600 90.00 94.36 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.002812 -0.000866 0.001156 0.25560 SCALE2 0.001415 0.000766 -0.002869 0.25000 SCALE3 0.001200 0.004942 0.001911 0.24870 MTRIX1 1 0.809017 -0.309017 0.500000 0.00000 MTRIX2 1 0.309017 -0.500000 -0.809017 0.00000 MTRIX3 1 0.500000 0.809017 -0.309017 0.00000 MTRIX1 2 0.809017 0.309017 0.500000 0.00000 MTRIX2 2 -0.309017 -0.500000 0.809017 0.00000 MTRIX3 2 0.500000 -0.809017 -0.309017 0.00000 MTRIX1 3 1.000000 0.000000 0.000000 0.00000 MTRIX2 3 0.000000 -1.000000 0.000000 0.00000 MTRIX3 3 0.000000 0.000000 -1.000000 0.00000 MTRIX1 4 0.809017 -0.309017 0.500000 0.00000 MTRIX2 4 -0.309017 0.500000 0.809017 0.00000 MTRIX3 4 -0.500000 -0.809017 0.309017 0.00000 MTRIX1 5 0.809017 0.309017 0.500000 0.00000 MTRIX2 5 0.309017 0.500000 -0.809017 0.00000 MTRIX3 5 -0.500000 0.809017 0.309017 0.00000 MTRIX1 6 0.500000 -0.809017 -0.309017 0.00000 MTRIX2 6 0.809017 0.309017 0.500000 0.00000 MTRIX3 6 -0.309017 -0.500000 0.809017 0.00000 MTRIX1 7 -0.000000 0.000000 1.000000 0.00000 MTRIX2 7 1.000000 0.000000 0.000000 0.00000 MTRIX3 7 0.000000 1.000000 -0.000000 0.00000 MTRIX1 8 0.500000 0.809017 -0.309017 0.00000 MTRIX2 8 0.809017 -0.309017 0.500000 0.00000 MTRIX3 8 0.309017 -0.500000 -0.809017 0.00000 MTRIX1 9 0.500000 0.809017 0.309017 0.00000 MTRIX2 9 0.809017 -0.309017 -0.500000 0.00000 MTRIX3 9 -0.309017 0.500000 -0.809017 0.00000 MTRIX1 10 0.809017 -0.309017 -0.500000 0.00000 MTRIX2 10 0.309017 -0.500000 0.809017 0.00000 MTRIX3 10 -0.500000 -0.809017 -0.309017 0.00000 MTRIX1 11 0.309017 -0.500000 0.809017 0.00000 MTRIX2 11 0.500000 0.809017 0.309017 0.00000 MTRIX3 11 -0.809017 0.309017 0.500000 0.00000 MTRIX1 12 -0.309017 -0.500000 -0.809017 0.00000 MTRIX2 12 0.500000 -0.809017 0.309017 0.00000 MTRIX3 12 -0.809017 -0.309017 0.500000 0.00000 MTRIX1 13 -0.809017 -0.309017 0.500000 0.00000 MTRIX2 13 0.309017 0.500000 0.809017 0.00000 MTRIX3 13 -0.500000 0.809017 -0.309017 0.00000 MTRIX1 14 -0.500000 0.809017 -0.309017 0.00000 MTRIX2 14 0.809017 0.309017 -0.500000 0.00000 MTRIX3 14 -0.309017 -0.500000 -0.809017 0.00000 MTRIX1 15 -0.309017 0.500000 0.809017 0.00000 MTRIX2 15 0.500000 0.809017 -0.309017 0.00000 MTRIX3 15 -0.809017 0.309017 -0.500000 0.00000 MTRIX1 16 0.309017 0.500000 -0.809017 0.00000 MTRIX2 16 0.500000 -0.809017 -0.309017 0.00000 MTRIX3 16 -0.809017 -0.309017 -0.500000 0.00000 MTRIX1 17 -0.000000 -1.000000 0.000000 0.00000 MTRIX2 17 -0.000000 0.000000 1.000000 0.00000 MTRIX3 17 -1.000000 0.000000 -0.000000 0.00000 MTRIX1 18 -0.309017 0.500000 -0.809017 0.00000 MTRIX2 18 -0.500000 -0.809017 -0.309017 0.00000 MTRIX3 18 -0.809017 0.309017 0.500000 0.00000 MTRIX1 19 -0.500000 -0.809017 -0.309017 0.00000 MTRIX2 19 -0.809017 0.309017 0.500000 0.00000 MTRIX3 19 -0.309017 0.500000 -0.809017 0.00000 MTRIX1 20 -0.809017 0.309017 0.500000 0.00000 MTRIX2 20 -0.309017 0.500000 -0.809017 0.00000 MTRIX3 20 -0.500000 -0.809017 -0.309017 0.00000 MTRIX1 21 -0.309017 -0.500000 0.809017 0.00000 MTRIX2 21 -0.500000 0.809017 0.309017 0.00000 MTRIX3 21 -0.809017 -0.309017 -0.500000 0.00000 MTRIX1 22 0.000000 1.000000 0.000000 0.00000 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