HEADER THIAMIN BIOSYNTHESIS 09-MAR-99 2TPS TITLE THIAMIN PHOSPHATE SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (THIAMIN PHOSPHATE SYNTHASE); COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.5.1.3 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 STRAIN: DE3 KEYWDS THIAMIN BIOSYNTHESIS, TIM BARREL EXPDTA X-RAY DIFFRACTION AUTHOR H.-J.CHIU,J.J.REDDICK,T.P.BEGLEY,S.E.EALICK REVDAT 4 27-DEC-23 2TPS 1 REMARK LINK REVDAT 3 24-FEB-09 2TPS 1 VERSN REVDAT 2 01-APR-03 2TPS 1 JRNL REVDAT 1 18-MAR-99 2TPS 0 JRNL AUTH H.J.CHIU,J.J.REDDICK,T.P.BEGLEY,S.E.EALICK JRNL TITL CRYSTAL STRUCTURE OF THIAMIN PHOSPHATE SYNTHASE FROM JRNL TITL 2 BACILLUS SUBTILIS AT 1.25 A RESOLUTION. JRNL REF BIOCHEMISTRY V. 38 6460 1999 JRNL REFN ISSN 0006-2960 JRNL PMID 10350464 JRNL DOI 10.1021/BI982903Z REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 81.6 REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : 5% OF THIN SHELLS REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.181 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.179 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 4747 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 94169 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.168 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 4022 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 79991 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3383 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 444 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 3962.6 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 9 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 18915 REMARK 3 NUMBER OF RESTRAINTS : 18840 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 ANGLE DISTANCES (A) : 2.344 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE WAS REFINED WITH X-PLOR REMARK 3 AND FOLLOWED BY SHELXL REMARK 4 REMARK 4 2TPS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAR-99. REMARK 100 THE DEPOSITION ID IS D_1000000609. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795,0.9792,0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94169 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.6 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 48.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.21900 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION CONDITIONS: 75 MM TRIS REMARK 280 -HCL, PH 7.5 21-22% PEG4000 75 MM MGCL2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.05000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.41500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.41500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.07500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.41500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.41500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.02500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.41500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.41500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 105.07500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.41500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.41500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 35.02500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.05000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 235 CA C O CB CG CD NE REMARK 470 ARG B 235 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 13 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 13 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 TYR A 29 CB - CG - CD1 ANGL. DEV. = 4.3 DEGREES REMARK 500 PHE A 58 CB - CG - CD1 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG A 71 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 HIS A 107 CG - ND1 - CE1 ANGL. DEV. = 9.8 DEGREES REMARK 500 HIS A 107 ND1 - CE1 - NE2 ANGL. DEV. = -7.3 DEGREES REMARK 500 TYR A 154 CB - CG - CD1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 175 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 175 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ASP A 216 CB - CG - OD1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG A 222 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 13 CD - NE - CZ ANGL. DEV. = 8.5 DEGREES REMARK 500 ARG B 13 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG B 19 CD - NE - CZ ANGL. DEV. = 20.5 DEGREES REMARK 500 ARG B 19 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 59 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG B 71 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG B 71 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 ARG B 119 CD - NE - CZ ANGL. DEV. = 10.1 DEGREES REMARK 500 ARG B 175 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 175 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 64 48.67 -106.15 REMARK 500 ASP A 93 -49.14 69.73 REMARK 500 ASP A 161 51.46 -97.52 REMARK 500 ILE A 208 -79.30 -110.03 REMARK 500 ASP B 93 -43.41 73.02 REMARK 500 ILE B 208 -80.56 -107.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A2005 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 93 OD1 REMARK 620 2 ASP A 112 OD2 83.9 REMARK 620 3 POP A2003 O2 171.4 90.6 REMARK 620 4 POP A2003 O6 97.0 178.5 88.3 REMARK 620 5 HOH A3020 O 85.3 90.6 88.1 88.3 REMARK 620 6 HOH A3051 O 92.8 86.7 93.5 94.3 176.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B2006 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 93 OD1 REMARK 620 2 ASP B 112 OD2 82.2 REMARK 620 3 POP B2004 O2 169.9 90.9 REMARK 620 4 POP B2004 O6 99.0 177.7 88.1 REMARK 620 5 HOH B3022 O 85.3 93.5 87.8 88.5 REMARK 620 6 HOH B3057 O 95.2 86.2 91.7 91.8 179.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: TPA REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: THIAMIN PHOSPHATE BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: TPB REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: THIAMIN PHOSPHATE BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: PPA REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: PYROPHOSPHATE BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: PPB REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: PYROPHOSPHATE BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: MGA REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: MG BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: MGB REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: MG BINDING SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPS A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TPS B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE POP A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE POP B 2004 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FOLLOWING RESIDUES ARE NOT PART OF THE SWISS-PROT REMARK 999 DATABASE ENTRY FOR CHAINS A & B: HIS9, HIS10, GLY11, REMARK 999 ILE12, ARG13. DBREF 2TPS A 14 235 UNP P39594 THIE_BACSU 1 222 DBREF 2TPS B 14 235 UNP P39594 THIE_BACSU 1 222 SEQADV 2TPS HIS A 9 UNP P39594 SEE REMARK 999 SEQADV 2TPS HIS A 10 UNP P39594 SEE REMARK 999 SEQADV 2TPS GLY A 11 UNP P39594 SEE REMARK 999 SEQADV 2TPS ILE A 12 UNP P39594 SEE REMARK 999 SEQADV 2TPS ARG A 13 UNP P39594 SEE REMARK 999 SEQADV 2TPS HIS B 9 UNP P39594 SEE REMARK 999 SEQADV 2TPS HIS B 10 UNP P39594 SEE REMARK 999 SEQADV 2TPS GLY B 11 UNP P39594 SEE REMARK 999 SEQADV 2TPS ILE B 12 UNP P39594 SEE REMARK 999 SEQADV 2TPS ARG B 13 UNP P39594 SEE REMARK 999 SEQRES 1 A 227 HIS HIS GLY ILE ARG MET THR ARG ILE SER ARG GLU MET SEQRES 2 A 227 MET LYS GLU LEU LEU SER VAL TYR PHE ILE MET GLY SER SEQRES 3 A 227 ASN ASN THR LYS ALA ASP PRO VAL THR VAL VAL GLN LYS SEQRES 4 A 227 ALA LEU LYS GLY GLY ALA THR LEU TYR GLN PHE ARG GLU SEQRES 5 A 227 LYS GLY GLY ASP ALA LEU THR GLY GLU ALA ARG ILE LYS SEQRES 6 A 227 PHE ALA GLU LYS ALA GLN ALA ALA CYS ARG GLU ALA GLY SEQRES 7 A 227 VAL PRO PHE ILE VAL ASN ASP ASP VAL GLU LEU ALA LEU SEQRES 8 A 227 ASN LEU LYS ALA ASP GLY ILE HIS ILE GLY GLN GLU ASP SEQRES 9 A 227 ALA ASN ALA LYS GLU VAL ARG ALA ALA ILE GLY ASP MET SEQRES 10 A 227 ILE LEU GLY VAL SER ALA HIS THR MET SER GLU VAL LYS SEQRES 11 A 227 GLN ALA GLU GLU ASP GLY ALA ASP TYR VAL GLY LEU GLY SEQRES 12 A 227 PRO ILE TYR PRO THR GLU THR LYS LYS ASP THR ARG ALA SEQRES 13 A 227 VAL GLN GLY VAL SER LEU ILE GLU ALA VAL ARG ARG GLN SEQRES 14 A 227 GLY ILE SER ILE PRO ILE VAL GLY ILE GLY GLY ILE THR SEQRES 15 A 227 ILE ASP ASN ALA ALA PRO VAL ILE GLN ALA GLY ALA ASP SEQRES 16 A 227 GLY VAL SER MET ILE SER ALA ILE SER GLN ALA GLU ASP SEQRES 17 A 227 PRO GLU SER ALA ALA ARG LYS PHE ARG GLU GLU ILE GLN SEQRES 18 A 227 THR TYR LYS THR GLY ARG SEQRES 1 B 227 HIS HIS GLY ILE ARG MET THR ARG ILE SER ARG GLU MET SEQRES 2 B 227 MET LYS GLU LEU LEU SER VAL TYR PHE ILE MET GLY SER SEQRES 3 B 227 ASN ASN THR LYS ALA ASP PRO VAL THR VAL VAL GLN LYS SEQRES 4 B 227 ALA LEU LYS GLY GLY ALA THR LEU TYR GLN PHE ARG GLU SEQRES 5 B 227 LYS GLY GLY ASP ALA LEU THR GLY GLU ALA ARG ILE LYS SEQRES 6 B 227 PHE ALA GLU LYS ALA GLN ALA ALA CYS ARG GLU ALA GLY SEQRES 7 B 227 VAL PRO PHE ILE VAL ASN ASP ASP VAL GLU LEU ALA LEU SEQRES 8 B 227 ASN LEU LYS ALA ASP GLY ILE HIS ILE GLY GLN GLU ASP SEQRES 9 B 227 ALA ASN ALA LYS GLU VAL ARG ALA ALA ILE GLY ASP MET SEQRES 10 B 227 ILE LEU GLY VAL SER ALA HIS THR MET SER GLU VAL LYS SEQRES 11 B 227 GLN ALA GLU GLU ASP GLY ALA ASP TYR VAL GLY LEU GLY SEQRES 12 B 227 PRO ILE TYR PRO THR GLU THR LYS LYS ASP THR ARG ALA SEQRES 13 B 227 VAL GLN GLY VAL SER LEU ILE GLU ALA VAL ARG ARG GLN SEQRES 14 B 227 GLY ILE SER ILE PRO ILE VAL GLY ILE GLY GLY ILE THR SEQRES 15 B 227 ILE ASP ASN ALA ALA PRO VAL ILE GLN ALA GLY ALA ASP SEQRES 16 B 227 GLY VAL SER MET ILE SER ALA ILE SER GLN ALA GLU ASP SEQRES 17 B 227 PRO GLU SER ALA ALA ARG LYS PHE ARG GLU GLU ILE GLN SEQRES 18 B 227 THR TYR LYS THR GLY ARG HET MG A2005 1 HET TPS A2001 22 HET POP A2003 9 HET MG B2006 1 HET TPS B2002 22 HET POP B2004 9 HETNAM MG MAGNESIUM ION HETNAM TPS THIAMIN PHOSPHATE HETNAM POP PYROPHOSPHATE 2- FORMUL 3 MG 2(MG 2+) FORMUL 4 TPS 2(C12 H18 N4 O4 P S 1+) FORMUL 5 POP 2(H2 O7 P2 2-) FORMUL 9 HOH *444(H2 O) HELIX 1 1 ARG A 19 LEU A 25 1 7 HELIX 2 2 SER A 34 ASN A 36 5 3 HELIX 3 3 PRO A 41 GLY A 51 1 11 HELIX 4 4 GLY A 68 ALA A 85 1 18 HELIX 5 5 VAL A 95 ASN A 100 1 6 HELIX 6 6 ALA A 115 ILE A 122 1 8 HELIX 7 7 MET A 134 ASP A 143 1 10 HELIX 8 8 SER A 169 ARG A 176 1 8 HELIX 9 9 ALA A 195 GLN A 199 1 5 HELIX 10 10 SER A 209 SER A 212 1 4 HELIX 11 11 PRO A 217 THR A 233 1 17 HELIX 12 12 ARG B 19 LEU B 25 1 7 HELIX 13 13 SER B 34 ASN B 36 5 3 HELIX 14 14 PRO B 41 GLY B 51 1 11 HELIX 15 15 GLY B 68 ALA B 85 1 18 HELIX 16 16 VAL B 95 LEU B 101 1 7 HELIX 17 17 ALA B 115 ALA B 121 1 7 HELIX 18 18 MET B 134 ASP B 143 1 10 HELIX 19 19 SER B 169 ARG B 176 1 8 HELIX 20 20 ILE B 191 GLN B 199 1 9 HELIX 21 21 SER B 209 SER B 212 1 4 HELIX 22 22 PRO B 217 LYS B 232 1 16 SHEET 1 A 9 VAL A 205 MET A 207 0 SHEET 2 A 9 VAL A 28 MET A 32 1 N TYR A 29 O VAL A 205 SHEET 3 A 9 LEU A 55 PHE A 58 1 N LEU A 55 O PHE A 30 SHEET 4 A 9 PRO A 88 ASN A 92 1 N PRO A 88 O TYR A 56 SHEET 5 A 9 GLY A 105 ILE A 108 1 N GLY A 105 O VAL A 91 SHEET 6 A 9 ILE A 126 ALA A 131 1 N ILE A 126 O ILE A 106 SHEET 7 A 9 TYR A 147 LEU A 150 1 N TYR A 147 O VAL A 129 SHEET 8 A 9 PRO A 182 ILE A 186 1 N PRO A 182 O VAL A 148 SHEET 9 A 9 GLY A 204 SER A 206 1 N GLY A 204 O GLY A 185 SHEET 1 B 9 VAL B 205 MET B 207 0 SHEET 2 B 9 VAL B 28 MET B 32 1 N TYR B 29 O VAL B 205 SHEET 3 B 9 LEU B 55 PHE B 58 1 N LEU B 55 O PHE B 30 SHEET 4 B 9 PRO B 88 ASN B 92 1 N PRO B 88 O TYR B 56 SHEET 5 B 9 GLY B 105 ILE B 108 1 N GLY B 105 O VAL B 91 SHEET 6 B 9 ILE B 126 ALA B 131 1 N ILE B 126 O ILE B 106 SHEET 7 B 9 TYR B 147 LEU B 150 1 N TYR B 147 O VAL B 129 SHEET 8 B 9 PRO B 182 ILE B 186 1 N PRO B 182 O VAL B 148 SHEET 9 B 9 GLY B 204 SER B 206 1 N GLY B 204 O GLY B 185 LINK OD1 ASP A 93 MG MG A2005 1555 1555 2.08 LINK OD2 ASP A 112 MG MG A2005 1555 1555 2.10 LINK O2 POP A2003 MG MG A2005 1555 1555 2.09 LINK O6 POP A2003 MG MG A2005 1555 1555 2.07 LINK MG MG A2005 O HOH A3020 1555 1555 2.12 LINK MG MG A2005 O HOH A3051 1555 1555 2.04 LINK OD1 ASP B 93 MG MG B2006 1555 1555 1.95 LINK OD2 ASP B 112 MG MG B2006 1555 1555 2.21 LINK O2 POP B2004 MG MG B2006 1555 1555 2.10 LINK O6 POP B2004 MG MG B2006 1555 1555 2.03 LINK MG MG B2006 O HOH B3022 1555 1555 2.04 LINK MG MG B2006 O HOH B3057 1555 1555 2.15 CISPEP 1 GLY A 151 PRO A 152 0 3.67 CISPEP 2 GLY B 151 PRO B 152 0 -1.95 SITE 1 TPA 10 TYR A 29 HIS A 107 TYR A 147 ILE A 186 SITE 2 TPA 10 ILE A 208 GLN A 57 THR A 156 THR A 158 SITE 3 TPA 10 GLY A 188 SER A 209 SITE 1 TPB 10 TYR B 29 HIS B 107 TYR B 147 ILE B 186 SITE 2 TPB 10 ILE B 208 GLN B 57 THR B 156 THR B 158 SITE 3 TPB 10 GLY B 188 SER B 209 SITE 1 PPA 5 ARG A 59 LYS A 61 LYS A 159 SER A 130 SITE 2 PPA 5 ASN A 92 SITE 1 PPB 5 ARG B 59 LYS B 61 LYS B 159 SER B 130 SITE 2 PPB 5 ASN B 92 SITE 1 MGA 2 ASP A 93 ASP A 112 SITE 1 MGB 2 ASP B 93 ASP B 112 SITE 1 AC1 5 ASP A 93 ASP A 112 POP A2003 HOH A3020 SITE 2 AC1 5 HOH A3051 SITE 1 AC2 5 ASP B 93 ASP B 112 POP B2004 HOH B3022 SITE 2 AC2 5 HOH B3057 SITE 1 AC3 19 TYR A 29 ILE A 31 GLN A 57 ARG A 59 SITE 2 AC3 19 ASN A 92 HIS A 107 SER A 130 THR A 156 SITE 3 AC3 19 THR A 158 ILE A 186 GLY A 188 MET A 207 SITE 4 AC3 19 ILE A 208 SER A 209 POP A2003 HOH A3001 SITE 5 AC3 19 HOH A3002 HOH A3063 HOH A3144 SITE 1 AC4 19 TYR B 29 ILE B 31 GLN B 57 ARG B 59 SITE 2 AC4 19 ASN B 92 HIS B 107 SER B 130 THR B 156 SITE 3 AC4 19 THR B 158 LYS B 159 ILE B 186 GLY B 188 SITE 4 AC4 19 MET B 207 ILE B 208 SER B 209 POP B2004 SITE 5 AC4 19 HOH B3003 HOH B3013 HOH B3169 SITE 1 AC5 16 ARG A 59 LYS A 61 ASN A 92 ASP A 93 SITE 2 AC5 16 GLY A 109 ASP A 112 SER A 130 LYS A 159 SITE 3 AC5 16 TPS A2001 MG A2005 HOH A3020 HOH A3027 SITE 4 AC5 16 HOH A3051 HOH A3062 HOH A3098 HOH A3108 SITE 1 AC6 16 ARG B 59 LYS B 61 ASN B 92 ASP B 93 SITE 2 AC6 16 GLY B 109 ASP B 112 SER B 130 LYS B 159 SITE 3 AC6 16 TPS B2002 MG B2006 HOH B3022 HOH B3029 SITE 4 AC6 16 HOH B3057 HOH B3081 HOH B3149 HOH B3202 CRYST1 76.830 76.830 140.100 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013016 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013016 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007138 0.00000 MTRIX1 1 -0.999757 -0.021512 0.004717 77.66400 1 MTRIX2 1 0.020668 -0.990450 -0.136313 78.60270 1 MTRIX3 1 0.007605 -0.136182 0.990655 4.66150 1