HEADER SUGAR-BINDING PROTEIN 21-MAR-07 2UWG OBSLTE 04-APR-12 2UWG 4AML TITLE CRYSTAL STRUCTURE OF WHEAT GERM AGGLUTININ ISOLECTIN 1 IN TITLE 2 COMPLEX WITH GLYCOSYLURETHAN COMPND MOL_ID: 1; COMPND 2 MOLECULE: AGGLUTININ ISOLECTIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 27-197; COMPND 5 SYNONYM: WGA1, ISOLECTIN A, HEAT GERM AGGLUTININ ISOLECTIN COMPND 6 1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 3 ORGANISM_COMMON: BREAD WHEAT; SOURCE 4 ORGANISM_TAXID: 4565 KEYWDS SYNTHETIC CARBOHYDRATE LIGAND, PROTEIN CARBOHYDRATE KEYWDS 2 INTERACTION, LECTIN, CHITIN-BINDING, WHEAT GERM KEYWDS 3 AGGLUTININ, CARBOHYDRATE BINDING PROTEIN, SUGAR-BINDING KEYWDS 4 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.SCHWEFEL,V.WITTMANN,K.DIEDERICHS,W.WELTE REVDAT 6 04-APR-12 2UWG 1 OBSLTE REVDAT 5 30-JUN-10 2UWG 1 JRNL REMARK REVDAT 4 23-JUN-10 2UWG 1 SOURCE JRNL REVDAT 3 16-FEB-10 2UWG 1 VERSN REVDAT 2 24-FEB-09 2UWG 1 VERSN REVDAT 1 13-MAY-08 2UWG 0 JRNL AUTH D.SCHWEFEL,C.MAIERHOFER,J.G.BECK,S.SEEBERGER, JRNL AUTH 2 K.DIEDERICHS,H.M.MOLLER,W.WELTE,V.WITTMANN JRNL TITL STRUCTURAL BASIS OF MULTIVALENT BINDING TO WHEAT JRNL TITL 2 GERM AGGLUTININ. JRNL REF J.AM.CHEM.SOC. V. 132 8704 2010 JRNL REFN ISSN 0002-7863 JRNL PMID 20527753 JRNL DOI 10.1021/JA101646K REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0022 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 43465 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2317 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2516 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 145 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2291 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 127 REMARK 3 SOLVENT ATOMS : 245 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.32000 REMARK 3 B22 (A**2) : 1.32000 REMARK 3 B33 (A**2) : -1.98000 REMARK 3 B12 (A**2) : 0.66000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.075 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.905 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2507 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3373 ; 1.453 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 343 ; 7.048 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;40.192 ;25.532 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 337 ;11.531 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 8.974 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 309 ; 0.217 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1954 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1214 ; 0.238 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1740 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 244 ; 0.108 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.130 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.139 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1684 ; 1.443 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2535 ; 2.213 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 944 ; 3.128 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 837 ; 4.060 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 170 REMARK 3 ORIGIN FOR THE GROUP (A): -12.3813 23.4057 18.9989 REMARK 3 T TENSOR REMARK 3 T11: 0.0013 T22: -0.0020 REMARK 3 T33: 0.0141 T12: -0.0006 REMARK 3 T13: -0.0029 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.0353 L22: 0.1001 REMARK 3 L33: 0.2091 L12: 0.0378 REMARK 3 L13: 0.0366 L23: -0.0620 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: -0.0210 S13: -0.0052 REMARK 3 S21: 0.0197 S22: 0.0059 S23: -0.0155 REMARK 3 S31: -0.0017 S32: 0.0071 S33: -0.0062 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 170 REMARK 3 ORIGIN FOR THE GROUP (A): -4.2289 19.8454 4.3740 REMARK 3 T TENSOR REMARK 3 T11: 0.0097 T22: -0.0017 REMARK 3 T33: 0.0187 T12: 0.0008 REMARK 3 T13: 0.0007 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.0759 L22: 0.1598 REMARK 3 L33: 0.2039 L12: 0.0908 REMARK 3 L13: -0.0343 L23: -0.1393 REMARK 3 S TENSOR REMARK 3 S11: -0.0202 S12: -0.0167 S13: 0.0028 REMARK 3 S21: -0.0178 S22: 0.0137 S23: -0.0018 REMARK 3 S31: 0.0416 S32: 0.0324 S33: 0.0065 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2UWG COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAR-07. REMARK 100 THE PDBE ID CODE IS EBI-31988. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46032 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.60 REMARK 200 RESOLUTION RANGE LOW (A) : 10.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 9.53 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.38 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 8.3 REMARK 200 R MERGE FOR SHELL (I) : 0.47 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.52 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1WGT REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.04 M POTASSIUM PHOSPHATE 14 % REMARK 280 PEG 8000 20 % GLYCEROL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 102.36667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 51.18333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 51.18333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 102.36667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP A 150 REMARK 465 TRP B 150 REMARK 465 GLY B 171 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 33 123.50 -39.55 REMARK 500 ALA A 93 46.14 -140.91 REMARK 500 ALA A 125 49.46 -80.50 REMARK 500 ASN A 143 18.04 58.51 REMARK 500 ALA B 50 49.48 -141.23 REMARK 500 ASN B 143 16.26 58.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 THR A 56 -33.0 R S CBETA WRONG HAND REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GYU A1173 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GYU A1174 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GYU B1172 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GYU B1173 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1175 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1174 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WGC RELATED DB: PDB REMARK 900 WHEAT GERM AGGLUTININ (ISOLECTIN 1) COMPLEX REMARK 900 WITH N-ACETYLNEURAMINYLLACTOSE REMARK 900 RELATED ID: 2CWG RELATED DB: PDB REMARK 900 WHEAT GERM AGGLUTININ ISOLECTIN 1 COMPLEX REMARK 900 WITH T5 SIALOGLYCOPEPTIDE OF GLYCOPHORIN A REMARK 900 RELATED ID: 2UVO RELATED DB: PDB REMARK 900 HIGH RESOLUTION CRYSTAL STRUCTURE OF WHEAT REMARK 900 GERM AGGLUTININ IN COMPLEX WITH N-ACETYL-D REMARK 900 -GLUCOSAMINE REMARK 900 RELATED ID: 7WGA RELATED DB: PDB REMARK 900 WHEAT GERM AGGLUTININ (ISOLECTIN 1) DBREF 2UWG A 1 171 UNP P10968 AGI1_WHEAT 27 197 DBREF 2UWG B 1 171 UNP P10968 AGI1_WHEAT 27 197 SEQRES 1 A 171 PCA ARG CYS GLY GLU GLN GLY SER ASN MET GLU CYS PRO SEQRES 2 A 171 ASN ASN LEU CYS CYS SER GLN TYR GLY TYR CYS GLY MET SEQRES 3 A 171 GLY GLY ASP TYR CYS GLY LYS GLY CYS GLN ASN GLY ALA SEQRES 4 A 171 CYS TRP THR SER LYS ARG CYS GLY SER GLN ALA GLY GLY SEQRES 5 A 171 ALA THR CYS THR ASN ASN GLN CYS CYS SER GLN TYR GLY SEQRES 6 A 171 TYR CYS GLY PHE GLY ALA GLU TYR CYS GLY ALA GLY CYS SEQRES 7 A 171 GLN GLY GLY PRO CYS ARG ALA ASP ILE LYS CYS GLY SER SEQRES 8 A 171 GLN ALA GLY GLY LYS LEU CYS PRO ASN ASN LEU CYS CYS SEQRES 9 A 171 SER GLN TRP GLY PHE CYS GLY LEU GLY SER GLU PHE CYS SEQRES 10 A 171 GLY GLY GLY CYS GLN SER GLY ALA CYS SER THR ASP LYS SEQRES 11 A 171 PRO CYS GLY LYS ASP ALA GLY GLY ARG VAL CYS THR ASN SEQRES 12 A 171 ASN TYR CYS CYS SER LYS TRP GLY SER CYS GLY ILE GLY SEQRES 13 A 171 PRO GLY TYR CYS GLY ALA GLY CYS GLN SER GLY GLY CYS SEQRES 14 A 171 ASP GLY SEQRES 1 B 171 PCA ARG CYS GLY GLU GLN GLY SER ASN MET GLU CYS PRO SEQRES 2 B 171 ASN ASN LEU CYS CYS SER GLN TYR GLY TYR CYS GLY MET SEQRES 3 B 171 GLY GLY ASP TYR CYS GLY LYS GLY CYS GLN ASN GLY ALA SEQRES 4 B 171 CYS TRP THR SER LYS ARG CYS GLY SER GLN ALA GLY GLY SEQRES 5 B 171 ALA THR CYS THR ASN ASN GLN CYS CYS SER GLN TYR GLY SEQRES 6 B 171 TYR CYS GLY PHE GLY ALA GLU TYR CYS GLY ALA GLY CYS SEQRES 7 B 171 GLN GLY GLY PRO CYS ARG ALA ASP ILE LYS CYS GLY SER SEQRES 8 B 171 GLN ALA GLY GLY LYS LEU CYS PRO ASN ASN LEU CYS CYS SEQRES 9 B 171 SER GLN TRP GLY PHE CYS GLY LEU GLY SER GLU PHE CYS SEQRES 10 B 171 GLY GLY GLY CYS GLN SER GLY ALA CYS SER THR ASP LYS SEQRES 11 B 171 PRO CYS GLY LYS ASP ALA GLY GLY ARG VAL CYS THR ASN SEQRES 12 B 171 ASN TYR CYS CYS SER LYS TRP GLY SER CYS GLY ILE GLY SEQRES 13 B 171 PRO GLY TYR CYS GLY ALA GLY CYS GLN SER GLY GLY CYS SEQRES 14 B 171 ASP GLY MODRES 2UWG PCA A 1 GLN PYROGLUTAMIC ACID MODRES 2UWG PCA B 1 GLN PYROGLUTAMIC ACID HET PCA A 1 8 HET PCA B 1 8 HET GYU A1173 24 HET GYU A1174 21 HET GYU B1172 21 HET GYU B1173 21 HET GOL A1175 12 HET GOL B1174 12 HETNAM PCA PYROGLUTAMIC ACID HETNAM GOL GLYCEROL HETNAM GYU 2-(ACETYLAMINO)-2-DEOXY-1-O-(PROPYLCARBAMOYL) HETNAM 2 GYU -ALPHA-D-GLUCOPYRANOSE FORMUL 3 PCA 2(C5 H7 N O3) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 5 GYU 4(C12 H22 N2 O7) FORMUL 6 HOH *245(H2 O) HELIX 1 1 CYS A 3 GLY A 7 5 5 HELIX 2 2 CYS A 12 LEU A 16 5 5 HELIX 3 3 GLY A 27 GLY A 32 1 6 HELIX 4 4 CYS A 46 GLY A 51 5 6 HELIX 5 5 GLY A 70 GLY A 75 1 6 HELIX 6 6 CYS A 89 GLY A 94 5 6 HELIX 7 7 CYS A 98 LEU A 102 5 5 HELIX 8 8 GLY A 113 GLY A 118 1 6 HELIX 9 9 CYS A 141 TYR A 145 5 5 HELIX 10 10 GLY A 156 GLY A 161 1 6 HELIX 11 11 CYS B 3 SER B 8 5 6 HELIX 12 12 CYS B 12 LEU B 16 5 5 HELIX 13 13 GLY B 27 GLY B 32 1 6 HELIX 14 14 CYS B 46 GLY B 51 5 6 HELIX 15 15 GLY B 70 GLY B 75 1 6 HELIX 16 16 CYS B 89 GLY B 94 5 6 HELIX 17 17 CYS B 98 LEU B 102 5 5 HELIX 18 18 GLY B 113 GLY B 118 1 6 HELIX 19 19 GLY B 133 GLY B 137 5 5 HELIX 20 20 CYS B 141 TYR B 145 5 5 HELIX 21 21 GLY B 156 GLY B 161 1 6 SHEET 1 AA 2 CYS A 17 CYS A 18 0 SHEET 2 AA 2 CYS A 24 GLY A 25 -1 O GLY A 25 N CYS A 17 SHEET 1 AB 2 CYS A 60 CYS A 61 0 SHEET 2 AB 2 CYS A 67 GLY A 68 -1 O GLY A 68 N CYS A 60 SHEET 1 AC 2 CYS A 103 CYS A 104 0 SHEET 2 AC 2 CYS A 110 GLY A 111 -1 O GLY A 111 N CYS A 103 SHEET 1 AD 2 CYS A 146 CYS A 147 0 SHEET 2 AD 2 CYS A 153 GLY A 154 -1 O GLY A 154 N CYS A 146 SHEET 1 BA 2 CYS B 17 CYS B 18 0 SHEET 2 BA 2 CYS B 24 GLY B 25 -1 O GLY B 25 N CYS B 17 SHEET 1 BB 2 CYS B 60 CYS B 61 0 SHEET 2 BB 2 CYS B 67 GLY B 68 -1 O GLY B 68 N CYS B 60 SHEET 1 BC 2 CYS B 103 CYS B 104 0 SHEET 2 BC 2 CYS B 110 GLY B 111 -1 O GLY B 111 N CYS B 103 SHEET 1 BD 2 CYS B 146 CYS B 147 0 SHEET 2 BD 2 CYS B 153 GLY B 154 -1 O GLY B 154 N CYS B 146 SSBOND 1 CYS A 3 CYS A 18 1555 1555 2.06 SSBOND 2 CYS A 12 CYS A 24 1555 1555 2.04 SSBOND 3 CYS A 17 CYS A 31 1555 1555 2.06 SSBOND 4 CYS A 35 CYS A 40 1555 1555 2.08 SSBOND 5 CYS A 46 CYS A 61 1555 1555 2.08 SSBOND 6 CYS A 55 CYS A 67 1555 1555 1.96 SSBOND 7 CYS A 60 CYS A 74 1555 1555 2.06 SSBOND 8 CYS A 78 CYS A 83 1555 1555 2.05 SSBOND 9 CYS A 89 CYS A 104 1555 1555 2.05 SSBOND 10 CYS A 98 CYS A 110 1555 1555 2.03 SSBOND 11 CYS A 103 CYS A 117 1555 1555 2.03 SSBOND 12 CYS A 121 CYS A 126 1555 1555 1.82 SSBOND 13 CYS A 132 CYS A 147 1555 1555 2.04 SSBOND 14 CYS A 141 CYS A 153 1555 1555 2.03 SSBOND 15 CYS A 146 CYS A 160 1555 1555 2.03 SSBOND 16 CYS A 164 CYS A 169 1555 1555 2.02 SSBOND 17 CYS B 3 CYS B 18 1555 1555 2.05 SSBOND 18 CYS B 12 CYS B 24 1555 1555 2.05 SSBOND 19 CYS B 17 CYS B 31 1555 1555 2.06 SSBOND 20 CYS B 35 CYS B 40 1555 1555 2.06 SSBOND 21 CYS B 46 CYS B 61 1555 1555 2.04 SSBOND 22 CYS B 55 CYS B 67 1555 1555 2.05 SSBOND 23 CYS B 60 CYS B 74 1555 1555 2.05 SSBOND 24 CYS B 78 CYS B 83 1555 1555 2.06 SSBOND 25 CYS B 89 CYS B 104 1555 1555 2.05 SSBOND 26 CYS B 98 CYS B 110 1555 1555 2.04 SSBOND 27 CYS B 103 CYS B 117 1555 1555 2.06 SSBOND 28 CYS B 121 CYS B 126 1555 1555 2.04 SSBOND 29 CYS B 132 CYS B 147 1555 1555 2.06 SSBOND 30 CYS B 141 CYS B 153 1555 1555 2.03 SSBOND 31 CYS B 146 CYS B 160 1555 1555 2.06 SSBOND 32 CYS B 164 CYS B 169 1555 1555 2.04 LINK C PCA A 1 N ARG A 2 1555 1555 1.35 LINK C PCA B 1 N ARG B 2 1555 1555 1.34 SITE 1 AC1 12 TYR A 23 SER A 62 TYR A 64 TYR A 66 SITE 2 AC1 12 GLU A 72 TYR A 73 HOH A2048 HOH A2123 SITE 3 AC1 12 HOH A2124 HOH A2125 SER B 114 GLU B 115 SITE 1 AC2 11 GLY A 51 ALA A 53 ASP A 86 SER A 105 SITE 2 AC2 11 TRP A 107 PHE A 109 GLU A 115 HOH A2126 SITE 3 AC2 11 HOH A2127 ALA B 71 GLU B 72 SITE 1 AC3 8 SER A 114 GLU A 115 SER B 62 TYR B 64 SITE 2 AC3 8 TYR B 66 GLU B 72 TYR B 73 HOH B2043 SITE 1 AC4 14 TYR A 21 ALA A 71 GLU A 72 GLY A 138 SITE 2 AC4 14 ASP B 86 SER B 105 TRP B 107 PHE B 109 SITE 3 AC4 14 PHE B 116 HOH B2112 HOH B2113 HOH B2114 SITE 4 AC4 14 HOH B2115 HOH B2116 SITE 1 AC5 10 GLY A 124 ALA A 125 CYS A 126 THR A 128 SITE 2 AC5 10 ASP A 129 CYS A 153 HOH A2128 MET B 26 SITE 3 AC5 10 GLY B 27 TRP B 41 SITE 1 AC6 9 MET A 26 TRP A 41 GLY B 124 ALA B 125 SITE 2 AC6 9 CYS B 126 ASP B 129 CYS B 153 HOH B2099 SITE 3 AC6 9 HOH B2117 CRYST1 63.250 63.250 153.550 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015810 0.009128 0.000000 0.00000 SCALE2 0.000000 0.018256 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006513 0.00000 HETATM 1 N PCA A 1 -18.312 11.113 3.722 1.00 29.32 N ANISOU 1 N PCA A 1 3799 3541 3802 -73 -18 44 N HETATM 2 CA PCA A 1 -18.390 12.010 2.581 1.00 29.76 C ANISOU 2 CA PCA A 1 3851 3597 3861 -79 -13 40 C HETATM 3 CB PCA A 1 -19.067 11.315 1.397 1.00 29.39 C ANISOU 3 CB PCA A 1 3822 3539 3807 -92 -15 46 C HETATM 4 CG PCA A 1 -19.061 9.827 1.720 1.00 30.38 C ANISOU 4 CG PCA A 1 3965 3653 3924 -92 -21 50 C HETATM 5 CD PCA A 1 -18.793 9.837 3.204 1.00 29.80 C ANISOU 5 CD PCA A 1 3880 3588 3853 -82 -23 50 C HETATM 6 OE PCA A 1 -18.964 8.844 3.905 1.00 30.49 O ANISOU 6 OE PCA A 1 3978 3672 3935 -82 -29 55 O HETATM 7 C PCA A 1 -19.036 13.343 2.976 1.00 27.76 C ANISOU 7 C PCA A 1 3580 3357 3611 -82 -12 42 C HETATM 8 O PCA A 1 -18.691 14.369 2.388 1.00 29.86 O ANISOU 8 O PCA A 1 3838 3626 3882 -80 -7 36 O