HEADER OXIDOREDUCTASE 30-MAR-07 2UXV TITLE SUFI PROTEIN FROM ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN SUFI; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SUFI; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PREP4; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PQE60; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P60-SUFI KEYWDS OXIDOREDUCTASE, SUFI, PERIPLASMIC, CUPREDOXIN-LIKE, FTS MUTANT KEYWDS 2 SUPPRESSOR EXPDTA X-RAY DIFFRACTION AUTHOR M.J.TARRY,P.ROVERSI,F.SARGENT,B.C.BERKS,S.M.LEA REVDAT 4 13-DEC-23 2UXV 1 REMARK REVDAT 3 17-FEB-09 2UXV 1 JRNL REVDAT 2 20-JAN-09 2UXV 1 VERSN JRNL REVDAT 1 13-MAY-08 2UXV 0 JRNL AUTH M.TARRY,S.J.ARENDS,P.ROVERSI,E.PIETTE,F.SARGENT,B.C.BERKS, JRNL AUTH 2 D.S.WEISS,S.M.LEA JRNL TITL THE ESCHERICHIA COLI CELL DIVISION PROTEIN AND MODEL TAT JRNL TITL 2 SUBSTRATE SUFI (FTSP) LOCALIZES TO THE SEPTAL RING AND HAS A JRNL TITL 3 MULTICOPPER OXIDASE-LIKE STRUCTURE. JRNL REF J.MOL.BIOL. V. 386 504 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19135451 JRNL DOI 10.1016/J.JMB.2008.12.043 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT 5.13.1.0 REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 24819 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.2156 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.2140 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.00 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 1260 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 24819 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6621 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 62 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : 1.060 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.005 ; 2.000 ; 6809 REMARK 3 BOND ANGLES (DEGREES) : 1.190 ; 2.000 ; 9230 REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : 0.008 ; 2.000 ; 176 REMARK 3 GENERAL PLANES (A) : 0.016 ; 5.000 ; 981 REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : 1.357 ; 20.000; 6809 REMARK 3 NON-BONDED CONTACTS (A) : 0.081 ; 5.000 ; 166 REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : 0 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : BABINET SCALING REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 65.00 REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : TNT PROTGEO REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : TNT BCORREL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE REFINED IN BUSTERTNT VERSION REMARK 3 BETA 2.1.1 REMARK 4 REMARK 4 2UXV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1290032130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24830 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 64.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2UXT REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.35M NACL 0.1M IMIDAZOLE, PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.44000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 GLY A 296 REMARK 465 GLU A 297 REMARK 465 ALA A 298 REMARK 465 ALA A 299 REMARK 465 SER A 300 REMARK 465 ILE A 301 REMARK 465 VAL A 302 REMARK 465 ASP A 303 REMARK 465 ARG A 304 REMARK 465 ILE A 305 REMARK 465 ARG A 306 REMARK 465 GLY A 307 REMARK 465 PHE A 308 REMARK 465 PHE A 309 REMARK 465 GLU A 310 REMARK 465 PRO A 311 REMARK 465 SER A 312 REMARK 465 SER A 313 REMARK 465 PRO A 470 REMARK 465 ARG A 471 REMARK 465 SER A 472 REMARK 465 HIS A 473 REMARK 465 HIS A 474 REMARK 465 HIS A 475 REMARK 465 HIS A 476 REMARK 465 HIS A 477 REMARK 465 HIS A 478 REMARK 465 ALA B 28 REMARK 465 GLY B 296 REMARK 465 GLU B 297 REMARK 465 ALA B 298 REMARK 465 ALA B 299 REMARK 465 SER B 300 REMARK 465 ILE B 301 REMARK 465 VAL B 302 REMARK 465 ASP B 303 REMARK 465 ARG B 304 REMARK 465 ILE B 305 REMARK 465 ARG B 306 REMARK 465 GLY B 307 REMARK 465 PHE B 308 REMARK 465 PHE B 309 REMARK 465 GLU B 310 REMARK 465 PRO B 311 REMARK 465 SER B 312 REMARK 465 SER B 313 REMARK 465 ILE B 314 REMARK 465 PRO B 470 REMARK 465 ARG B 471 REMARK 465 SER B 472 REMARK 465 HIS B 473 REMARK 465 HIS B 474 REMARK 465 HIS B 475 REMARK 465 HIS B 476 REMARK 465 HIS B 477 REMARK 465 HIS B 478 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR B 199 OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ASN B 175 O HOH B 2010 2.06 REMARK 500 OE2 GLU A 41 NH1 ARG A 44 2.10 REMARK 500 OD2 ASP B 180 O HOH B 2011 2.15 REMARK 500 O PRO B 342 N GLU B 344 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 44 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 GLY A 45 N - CA - C ANGL. DEV. = -15.5 DEGREES REMARK 500 GLN A 46 N - CA - C ANGL. DEV. = 19.6 DEGREES REMARK 500 PRO A 47 C - N - CD ANGL. DEV. = -20.3 DEGREES REMARK 500 PRO A 47 N - CA - C ANGL. DEV. = -24.4 DEGREES REMARK 500 ALA A 55 N - CA - C ANGL. DEV. = 16.3 DEGREES REMARK 500 GLY A 114 N - CA - C ANGL. DEV. = -25.5 DEGREES REMARK 500 LEU A 252 CA - CB - CG ANGL. DEV. = 17.1 DEGREES REMARK 500 ASP A 334 N - CA - C ANGL. DEV. = 21.1 DEGREES REMARK 500 ARG B 44 CB - CA - C ANGL. DEV. = -16.2 DEGREES REMARK 500 ARG B 44 CA - CB - CG ANGL. DEV. = 16.0 DEGREES REMARK 500 ARG B 44 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG B 44 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 PRO B 47 C - N - CD ANGL. DEV. = -15.9 DEGREES REMARK 500 PRO B 197 C - N - CD ANGL. DEV. = -13.3 DEGREES REMARK 500 LEU B 331 CA - CB - CG ANGL. DEV. = -14.7 DEGREES REMARK 500 PRO B 337 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 PRO B 337 C - N - CD ANGL. DEV. = -17.4 DEGREES REMARK 500 ILE B 345 N - CA - C ANGL. DEV. = -16.3 DEGREES REMARK 500 MET B 346 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 ARG B 389 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 42 -76.75 -75.96 REMARK 500 ARG A 43 68.00 -59.10 REMARK 500 ARG A 44 -34.40 -176.42 REMARK 500 GLN A 46 24.61 143.43 REMARK 500 ALA A 55 -117.75 -120.59 REMARK 500 HIS A 56 85.31 64.98 REMARK 500 VAL A 67 -159.77 -115.55 REMARK 500 LEU A 75 -137.98 68.41 REMARK 500 ALA A 127 74.40 -119.31 REMARK 500 ARG A 133 18.59 -143.19 REMARK 500 LEU A 139 -166.09 -104.03 REMARK 500 ASN A 147 -0.11 62.91 REMARK 500 ASN A 175 17.81 -140.57 REMARK 500 VAL A 179 -66.30 -106.73 REMARK 500 ASP A 192 -177.56 -63.78 REMARK 500 GLU A 201 107.96 -40.16 REMARK 500 SER A 219 54.40 31.07 REMARK 500 SER A 239 -31.38 -159.43 REMARK 500 ASN A 247 1.92 -68.32 REMARK 500 PRO A 251 -171.87 -63.58 REMARK 500 MET A 285 43.02 -101.48 REMARK 500 VAL A 320 -64.95 -91.02 REMARK 500 LEU A 328 -177.51 -60.55 REMARK 500 PRO A 330 -87.79 -75.44 REMARK 500 VAL A 332 68.92 -108.28 REMARK 500 ASP A 334 114.22 -26.82 REMARK 500 LEU A 340 -65.99 -91.63 REMARK 500 GLU A 344 47.68 -76.13 REMARK 500 ILE A 345 108.23 -55.11 REMARK 500 LEU A 358 -157.46 -118.55 REMARK 500 GLU A 416 -56.97 104.69 REMARK 500 ASP A 422 -3.68 -142.74 REMARK 500 GLN A 429 139.63 -176.01 REMARK 500 PHE A 444 55.79 -147.01 REMARK 500 ASP A 457 -5.44 -57.78 REMARK 500 GLN B 31 86.35 76.25 REMARK 500 ARG B 43 153.70 173.66 REMARK 500 VAL B 67 -163.51 -126.60 REMARK 500 ASN B 71 32.53 71.91 REMARK 500 LEU B 75 -142.63 63.06 REMARK 500 ARG B 133 33.01 -141.33 REMARK 500 ASN B 147 -18.06 69.69 REMARK 500 ASN B 175 14.55 -140.93 REMARK 500 SER B 219 54.73 36.63 REMARK 500 SER B 225 -173.35 -66.40 REMARK 500 ARG B 226 53.04 -113.43 REMARK 500 SER B 239 -31.43 -157.62 REMARK 500 VAL B 320 -60.12 -94.12 REMARK 500 LEU B 329 -171.67 -25.46 REMARK 500 PRO B 330 176.34 41.74 REMARK 500 REMARK 500 THIS ENTRY HAS 61 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 46 PRO A 47 144.56 REMARK 500 ARG A 54 ALA A 55 -123.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE B 194 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 54 -15.71 REMARK 500 ARG B 44 -13.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2UXT RELATED DB: PDB REMARK 900 SUFI PROTEIN FROM ESCHERICHIA COLI DBREF 2UXV A 28 470 UNP P26648 SUFI_ECOLI 28 470 DBREF 2UXV A 471 478 PDB 2UXV 2UXV 471 478 DBREF 2UXV B 28 470 UNP P26648 SUFI_ECOLI 28 470 DBREF 2UXV B 471 478 PDB 2UXV 2UXV 471 478 SEQRES 1 A 451 ALA GLY GLN GLN GLN PRO LEU PRO VAL PRO PRO LEU LEU SEQRES 2 A 451 GLU SER ARG ARG GLY GLN PRO LEU PHE MET THR VAL GLN SEQRES 3 A 451 ARG ALA HIS TRP SER PHE THR PRO GLY THR ARG ALA SER SEQRES 4 A 451 VAL TRP GLY ILE ASN GLY ARG TYR LEU GLY PRO THR ILE SEQRES 5 A 451 ARG VAL TRP LYS GLY ASP ASP VAL LYS LEU ILE TYR SER SEQRES 6 A 451 ASN ARG LEU THR GLU ASN VAL SER MET THR VAL ALA GLY SEQRES 7 A 451 LEU GLN VAL PRO GLY PRO LEU MET GLY GLY PRO ALA ARG SEQRES 8 A 451 MET MET SER PRO ASN ALA ASP TRP ALA PRO VAL LEU PRO SEQRES 9 A 451 ILE ARG GLN ASN ALA ALA THR LEU TRP TYR HIS ALA ASN SEQRES 10 A 451 THR PRO ASN ARG THR ALA GLN GLN VAL TYR ASN GLY LEU SEQRES 11 A 451 ALA GLY MET TRP LEU VAL GLU ASP GLU VAL SER LYS SER SEQRES 12 A 451 LEU PRO ILE PRO ASN HIS TYR GLY VAL ASP ASP PHE PRO SEQRES 13 A 451 VAL ILE ILE GLN ASP LYS ARG LEU ASP ASN PHE GLY THR SEQRES 14 A 451 PRO GLU TYR ASN GLU PRO GLY SER GLY GLY PHE VAL GLY SEQRES 15 A 451 ASP THR LEU LEU VAL ASN GLY VAL GLN SER PRO TYR VAL SEQRES 16 A 451 GLU VAL SER ARG GLY TRP VAL ARG LEU ARG LEU LEU ASN SEQRES 17 A 451 ALA SER ASN SER ARG ARG TYR GLN LEU GLN MET ASN ASP SEQRES 18 A 451 GLY ARG PRO LEU HIS VAL ILE SER GLY ASP GLN GLY PHE SEQRES 19 A 451 LEU PRO ALA PRO VAL SER VAL LYS GLN LEU SER LEU ALA SEQRES 20 A 451 PRO GLY GLU ARG ARG GLU ILE LEU VAL ASP MET SER ASN SEQRES 21 A 451 GLY ASP GLU VAL SER ILE THR CYS GLY GLU ALA ALA SER SEQRES 22 A 451 ILE VAL ASP ARG ILE ARG GLY PHE PHE GLU PRO SER SER SEQRES 23 A 451 ILE LEU VAL SER THR LEU VAL LEU THR LEU ARG PRO THR SEQRES 24 A 451 GLY LEU LEU PRO LEU VAL THR ASP SER LEU PRO MET ARG SEQRES 25 A 451 LEU LEU PRO THR GLU ILE MET ALA GLY SER PRO ILE ARG SEQRES 26 A 451 SER ARG ASP ILE SER LEU GLY ASP ASP PRO GLY ILE ASN SEQRES 27 A 451 GLY GLN LEU TRP ASP VAL ASN ARG ILE ASP VAL THR ALA SEQRES 28 A 451 GLN GLN GLY THR TRP GLU ARG TRP THR VAL ARG ALA ASP SEQRES 29 A 451 GLU PRO GLN ALA PHE HIS ILE GLU GLY VAL MET PHE GLN SEQRES 30 A 451 ILE ARG ASN VAL ASN GLY ALA MET PRO PHE PRO GLU ASP SEQRES 31 A 451 ARG GLY TRP LYS ASP THR VAL TRP VAL ASP GLY GLN VAL SEQRES 32 A 451 GLU LEU LEU VAL TYR PHE GLY GLN PRO SER TRP ALA HIS SEQRES 33 A 451 PHE PRO PHE TYR PHE ASN SER GLN THR LEU GLU MET ALA SEQRES 34 A 451 ASP ARG GLY SER ILE GLY GLN LEU LEU VAL ASN PRO VAL SEQRES 35 A 451 PRO ARG SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 451 ALA GLY GLN GLN GLN PRO LEU PRO VAL PRO PRO LEU LEU SEQRES 2 B 451 GLU SER ARG ARG GLY GLN PRO LEU PHE MET THR VAL GLN SEQRES 3 B 451 ARG ALA HIS TRP SER PHE THR PRO GLY THR ARG ALA SER SEQRES 4 B 451 VAL TRP GLY ILE ASN GLY ARG TYR LEU GLY PRO THR ILE SEQRES 5 B 451 ARG VAL TRP LYS GLY ASP ASP VAL LYS LEU ILE TYR SER SEQRES 6 B 451 ASN ARG LEU THR GLU ASN VAL SER MET THR VAL ALA GLY SEQRES 7 B 451 LEU GLN VAL PRO GLY PRO LEU MET GLY GLY PRO ALA ARG SEQRES 8 B 451 MET MET SER PRO ASN ALA ASP TRP ALA PRO VAL LEU PRO SEQRES 9 B 451 ILE ARG GLN ASN ALA ALA THR LEU TRP TYR HIS ALA ASN SEQRES 10 B 451 THR PRO ASN ARG THR ALA GLN GLN VAL TYR ASN GLY LEU SEQRES 11 B 451 ALA GLY MET TRP LEU VAL GLU ASP GLU VAL SER LYS SER SEQRES 12 B 451 LEU PRO ILE PRO ASN HIS TYR GLY VAL ASP ASP PHE PRO SEQRES 13 B 451 VAL ILE ILE GLN ASP LYS ARG LEU ASP ASN PHE GLY THR SEQRES 14 B 451 PRO GLU TYR ASN GLU PRO GLY SER GLY GLY PHE VAL GLY SEQRES 15 B 451 ASP THR LEU LEU VAL ASN GLY VAL GLN SER PRO TYR VAL SEQRES 16 B 451 GLU VAL SER ARG GLY TRP VAL ARG LEU ARG LEU LEU ASN SEQRES 17 B 451 ALA SER ASN SER ARG ARG TYR GLN LEU GLN MET ASN ASP SEQRES 18 B 451 GLY ARG PRO LEU HIS VAL ILE SER GLY ASP GLN GLY PHE SEQRES 19 B 451 LEU PRO ALA PRO VAL SER VAL LYS GLN LEU SER LEU ALA SEQRES 20 B 451 PRO GLY GLU ARG ARG GLU ILE LEU VAL ASP MET SER ASN SEQRES 21 B 451 GLY ASP GLU VAL SER ILE THR CYS GLY GLU ALA ALA SER SEQRES 22 B 451 ILE VAL ASP ARG ILE ARG GLY PHE PHE GLU PRO SER SER SEQRES 23 B 451 ILE LEU VAL SER THR LEU VAL LEU THR LEU ARG PRO THR SEQRES 24 B 451 GLY LEU LEU PRO LEU VAL THR ASP SER LEU PRO MET ARG SEQRES 25 B 451 LEU LEU PRO THR GLU ILE MET ALA GLY SER PRO ILE ARG SEQRES 26 B 451 SER ARG ASP ILE SER LEU GLY ASP ASP PRO GLY ILE ASN SEQRES 27 B 451 GLY GLN LEU TRP ASP VAL ASN ARG ILE ASP VAL THR ALA SEQRES 28 B 451 GLN GLN GLY THR TRP GLU ARG TRP THR VAL ARG ALA ASP SEQRES 29 B 451 GLU PRO GLN ALA PHE HIS ILE GLU GLY VAL MET PHE GLN SEQRES 30 B 451 ILE ARG ASN VAL ASN GLY ALA MET PRO PHE PRO GLU ASP SEQRES 31 B 451 ARG GLY TRP LYS ASP THR VAL TRP VAL ASP GLY GLN VAL SEQRES 32 B 451 GLU LEU LEU VAL TYR PHE GLY GLN PRO SER TRP ALA HIS SEQRES 33 B 451 PHE PRO PHE TYR PHE ASN SER GLN THR LEU GLU MET ALA SEQRES 34 B 451 ASP ARG GLY SER ILE GLY GLN LEU LEU VAL ASN PRO VAL SEQRES 35 B 451 PRO ARG SER HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *62(H2 O) HELIX 1 1 PRO A 109 MET A 113 5 5 HELIX 2 2 GLY A 115 MET A 119 5 5 HELIX 3 3 ARG A 148 ASN A 155 1 8 HELIX 4 4 THR A 452 ASP A 457 1 6 HELIX 5 5 PRO B 109 MET B 113 5 5 HELIX 6 6 GLY B 115 MET B 119 5 5 HELIX 7 7 ARG B 148 ASN B 155 1 8 HELIX 8 8 ASP B 165 LEU B 171 1 7 HELIX 9 9 PHE B 414 ARG B 418 5 5 HELIX 10 10 THR B 452 ASP B 457 1 6 SHEET 1 AA 5 LEU A 39 GLU A 41 0 SHEET 2 AA 5 THR A 78 TRP A 82 1 O THR A 78 N LEU A 40 SHEET 3 AA 5 ALA A 158 GLU A 164 1 O MET A 160 N ILE A 79 SHEET 4 AA 5 ALA A 137 ALA A 143 -1 O ALA A 137 N VAL A 163 SHEET 5 AA 5 MET A 101 ALA A 104 -1 O THR A 102 N HIS A 142 SHEET 1 AB 4 TRP A 68 ILE A 70 0 SHEET 2 AB 4 LEU A 48 ARG A 54 -1 O GLN A 53 N GLY A 69 SHEET 3 AB 4 ASP A 86 ASN A 93 1 O LYS A 88 N LEU A 48 SHEET 4 AB 4 VAL A 129 PRO A 131 -1 O LEU A 130 N VAL A 87 SHEET 1 AC 4 TRP A 68 ILE A 70 0 SHEET 2 AC 4 LEU A 48 ARG A 54 -1 O GLN A 53 N GLY A 69 SHEET 3 AC 4 ASP A 86 ASN A 93 1 O LYS A 88 N LEU A 48 SHEET 4 AC 4 ASP A 125 TRP A 126 -1 O TRP A 126 N TYR A 91 SHEET 1 AD 7 VAL A 217 GLN A 218 0 SHEET 2 AD 7 THR A 211 VAL A 214 -1 O VAL A 214 N VAL A 217 SHEET 3 AD 7 ASP A 181 LYS A 189 -1 O GLN A 187 N LEU A 213 SHEET 4 AD 7 TRP A 228 ASN A 235 1 O ARG A 230 N PHE A 182 SHEET 5 AD 7 ARG A 278 ASP A 284 -1 O ARG A 279 N LEU A 233 SHEET 6 AD 7 LEU A 252 GLY A 257 -1 O HIS A 253 N LEU A 282 SHEET 7 AD 7 GLY A 260 VAL A 268 -1 O GLY A 260 N GLY A 257 SHEET 1 AE 5 TYR A 221 VAL A 224 0 SHEET 2 AE 5 LEU A 319 PRO A 325 1 O THR A 322 N VAL A 222 SHEET 3 AE 5 VAL A 291 THR A 294 -1 O VAL A 291 N LEU A 323 SHEET 4 AE 5 TYR A 242 MET A 246 -1 O GLN A 245 N THR A 294 SHEET 5 AE 5 LEU A 271 LEU A 273 -1 O LEU A 271 N LEU A 244 SHEET 1 AF 4 ARG A 352 SER A 357 0 SHEET 2 AF 4 THR A 382 ILE A 398 1 O ARG A 385 N ARG A 354 SHEET 3 AF 4 THR A 423 PHE A 436 -1 O VAL A 424 N PHE A 396 SHEET 4 AF 4 MET A 402 VAL A 408 -1 O MET A 402 N TYR A 435 SHEET 1 AG 5 ARG A 352 SER A 357 0 SHEET 2 AG 5 THR A 382 ILE A 398 1 O ARG A 385 N ARG A 354 SHEET 3 AG 5 PHE A 446 SER A 450 -1 O ASN A 449 N HIS A 397 SHEET 4 AG 5 ILE A 461 ASN A 467 -1 O GLY A 462 N PHE A 448 SHEET 5 AG 5 VAL A 376 GLN A 379 1 O VAL A 376 N LEU A 465 SHEET 1 BA 5 LEU B 39 GLU B 41 0 SHEET 2 BA 5 THR B 78 TRP B 82 1 O THR B 78 N LEU B 40 SHEET 3 BA 5 ALA B 158 GLU B 164 1 O MET B 160 N ILE B 79 SHEET 4 BA 5 ALA B 137 ALA B 143 -1 O ALA B 137 N VAL B 163 SHEET 5 BA 5 MET B 101 ALA B 104 -1 O THR B 102 N HIS B 142 SHEET 1 BB 5 ARG B 73 TYR B 74 0 SHEET 2 BB 5 ALA B 65 ILE B 70 -1 O ILE B 70 N ARG B 73 SHEET 3 BB 5 LEU B 48 TRP B 57 -1 O GLN B 53 N GLY B 69 SHEET 4 BB 5 ASP B 86 ASN B 93 1 O LYS B 88 N LEU B 48 SHEET 5 BB 5 VAL B 129 PRO B 131 -1 O LEU B 130 N VAL B 87 SHEET 1 BC 5 ARG B 73 TYR B 74 0 SHEET 2 BC 5 ALA B 65 ILE B 70 -1 O ILE B 70 N ARG B 73 SHEET 3 BC 5 LEU B 48 TRP B 57 -1 O GLN B 53 N GLY B 69 SHEET 4 BC 5 ASP B 86 ASN B 93 1 O LYS B 88 N LEU B 48 SHEET 5 BC 5 ASP B 125 TRP B 126 -1 O TRP B 126 N TYR B 91 SHEET 1 BD 7 VAL B 217 GLN B 218 0 SHEET 2 BD 7 LEU B 213 VAL B 214 -1 O VAL B 214 N VAL B 217 SHEET 3 BD 7 ASP B 181 GLN B 187 -1 O GLN B 187 N LEU B 213 SHEET 4 BD 7 TRP B 228 ASN B 235 1 O ARG B 230 N PHE B 182 SHEET 5 BD 7 ARG B 278 ASP B 284 -1 O ARG B 279 N LEU B 233 SHEET 6 BD 7 LEU B 252 SER B 256 -1 O HIS B 253 N LEU B 282 SHEET 7 BD 7 PHE B 261 VAL B 268 -1 N LEU B 262 O ILE B 255 SHEET 1 BE 5 TYR B 221 GLU B 223 0 SHEET 2 BE 5 LEU B 319 ARG B 324 1 O THR B 322 N VAL B 222 SHEET 3 BE 5 VAL B 291 THR B 294 -1 O VAL B 291 N LEU B 323 SHEET 4 BE 5 TYR B 242 MET B 246 -1 O GLN B 245 N THR B 294 SHEET 5 BE 5 LEU B 271 LEU B 273 -1 O LEU B 271 N LEU B 244 SHEET 1 BF 9 ARG B 352 SER B 357 0 SHEET 2 BF 9 THR B 382 ILE B 398 1 O ARG B 385 N ARG B 354 SHEET 3 BF 9 VAL B 376 GLN B 379 1 O GLN B 379 N THR B 382 SHEET 4 BF 9 ILE B 461 ASN B 467 1 O LEU B 465 N ALA B 378 SHEET 5 BF 9 PHE B 446 SER B 450 -1 O PHE B 446 N LEU B 464 SHEET 6 BF 9 THR B 382 ILE B 398 -1 O HIS B 397 N ASN B 449 SHEET 7 BF 9 MET B 402 VAL B 408 0 SHEET 8 BF 9 THR B 423 PHE B 436 -1 O GLU B 431 N ARG B 406 SHEET 9 BF 9 THR B 382 ILE B 398 -1 O THR B 382 N PHE B 436 CISPEP 1 GLY A 114 GLY A 115 0 7.52 CISPEP 2 SER A 256 GLY A 257 0 -0.29 CISPEP 3 PRO A 330 LEU A 331 0 7.41 CISPEP 4 LEU A 331 VAL A 332 0 -5.82 CISPEP 5 PRO A 415 GLU A 416 0 25.95 CISPEP 6 PRO A 468 VAL A 469 0 -10.27 CISPEP 7 PRO B 61 GLY B 62 0 2.40 CISPEP 8 MET B 113 GLY B 114 0 -4.12 CISPEP 9 GLY B 203 SER B 204 0 -3.42 CISPEP 10 SER B 256 GLY B 257 0 -0.32 CISPEP 11 PRO B 325 THR B 326 0 12.82 CISPEP 12 THR B 326 GLY B 327 0 -4.71 CISPEP 13 GLY B 327 LEU B 328 0 -0.37 CISPEP 14 LEU B 331 VAL B 332 0 9.35 CISPEP 15 ILE B 345 MET B 346 0 -5.82 CISPEP 16 ALA B 347 GLY B 348 0 -7.97 CISPEP 17 PRO B 468 VAL B 469 0 1.39 CRYST1 64.120 48.880 131.960 90.00 95.90 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015596 0.000000 0.001612 0.00000 SCALE2 0.000000 0.020458 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007618 0.00000 MTRIX1 1 -0.996000 0.086000 -0.008000 -56.88804 1 MTRIX2 1 0.085000 0.994000 0.075000 4.51364 1 MTRIX3 1 0.015000 0.074000 -0.997000 -64.19139 1