data_2UYH # _entry.id 2UYH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2UYH pdb_00002uyh 10.2210/pdb2uyh/pdb PDBE EBI-32161 ? ? WWPDB D_1290032161 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 10MH unspecified ;TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DEOXYRIBONUCLEIC ACID CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGET ; PDB 1FJX unspecified 'STRUCTURE OF TERNARY COMPLEX OF HHAI METHYLTRANSFERASEMUTANT (T250G) IN COMPLEX WITH DNA AND ADOHCY' PDB 1HMY unspecified 'HHAI DEOXYRIBONUCLEIC ACID (CYTOSINE-C5-)- METHYLTRANSFERASE COMPLEX WITH S-ADENOSYL-L- METHIONINE' PDB 1M0E unspecified 'ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS ACOVALENT COMPLEX WITH DNA METHYLTRANSFERASE' PDB 1MHT unspecified 'COVALENT TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE, DEOXYRIBONUCLEIC ACID AND S- ADENOSYL-L-HOMOCYSTEINE' PDB 1SKM unspecified 'HHAI METHYLTRANSFERASE IN COMPLEX WITH DNA CONTAINING ANABASIC SOUTH CARBOCYCLIC SUGAR AT ITS TARGET SITE' PDB 1SVU unspecified 'STRUCTURE OF THE Q237W MUTANT OF HHAI DNAMETHYLTRANSFERASE: AN INSIGHT INTO PROTEIN- PROTEININTERACTIONS' PDB 2C7O unspecified ;HHAI DNA METHYLTRANSFERASE COMPLEX WITH 13MER OLIGONUCLEOTIDE CONTAINING 2-AMINOPURINE ADJACENT TO THE TARGET BASE (PCGC:GMGC) AND SAH ; PDB 2C7P unspecified 'HHAI DNA METHYLTRANSFERASE COMPLEX WITH OLIGONUCLEOTIDE CONTAINING 2-AMINOPURINE OPPOSITE TO THE TARGET BASE (GCGC:GMPC) AND SAH' PDB 2C7Q unspecified ;HHAI DNA METHYLTRANSFERASE COMPLEX WITH OLIGONUCLEOTIDE CONTAINING 2-AMINOPURINE OUTSIDE THE RECOGNITION SEQUENCE (PAIRED WITH G) AND SAH ; PDB 2C7R unspecified ;HHAI DNA METHYLTRANSFERASE (T250G MUTANT) COMPLEX WITH OLIGONUCLEOTIDE CONTAINING 2- AMINOPURINE AS A TARGET BASE (GPGC:GMGC) AND SAH ; PDB 2HMY unspecified ;BINARY COMPLEX OF HHAI METHYLTRANSFERASE WITH ADOMET FORMED IN THE PRESENCE OF A SHORT NONPSECIFIC DEOXYRIBONUCLEIC ACID OLIGONUCLEOTIDE ; PDB 2UYC unspecified 'HHAI DNA METHYLTRANSFERASE R163N MUTANT COMPLEX WITH 13MER GCGC-GMGC OLIGONUCLEOTIDE AND SAH' PDB 3MHT unspecified 'TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH UNMODIFIED DEOXYRIBONUCLEIC ACID AND ADOHCY' PDB 4MHT unspecified 'TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH NATIVE DEOXYRIBONUCLEIC ACID AND ADOHCY' PDB 5MHT unspecified 'TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH HEMIMETHYLATED DEOXYRIBONUCLEIC ACID AND ADOHCY' PDB 6MHT unspecified ;TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND DEOXYRIBONUCLEIC ACID CONTAINING 4'-THIO-2'DEOXYCYTIDINE AT THE TARGET ; PDB 7MHT unspecified 'CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/ DEOXYRIBONUCLEIC ACID COMPLEX' PDB 8MHT unspecified 'CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/ DEOXYRIBONUCLEIC ACID COMPLEX' PDB 9MHT unspecified 'CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/ DEOXYRIBONUCLEIC ACID COMPLEX' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2UYH _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-04-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Daujotyte, D.' 1 'Grazulis, S.' 2 # _citation.id primary _citation.title 'HhaI DNA Methyltransferase S87Q-Q237S Mutant Complex with 13mer Gcgc-Gmgc Oligonucleotide and Sah' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Daujotyte, D.' 1 ? primary 'Grazulis, S.' 2 ? # _cell.entry_id 2UYH _cell.length_a 95.382 _cell.length_b 95.382 _cell.length_c 312.972 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2UYH _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'MODIFICATION METHYLASE HHAI' 37042.207 1 2.1.1.37 YES ? ? 2 polymer syn ;5'-D(*TP*GP*GP*AP*TP*G*5CMP*GP*CP*TP*GP *AP*C)-3' ; 4021.636 1 ? ? ? ? 3 polymer syn ;5'-D(*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP *CP*C)-3' ; 3623.368 1 ? ? ? ? 4 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 6 water nat water 18.015 89 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HHAI DNA METHYLTRANSFERASE, CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI, M.HHAI' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFP CQAFSIQGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIP QKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGSGER IYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGS SLNFKPY ; ;MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFP CQAFSIQGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIP QKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGSGER IYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGS SLNFKPY ; A ? 2 polydeoxyribonucleotide no yes '(DT)(DG)(DG)(DA)(DT)(DG)(5CM)(DG)(DC)(DT)(DG)(DA)(DC)' TGGATGCGCTGAC C ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DA)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DC)' GTCAGCGCATCC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 GLU n 1 4 ILE n 1 5 LYS n 1 6 ASP n 1 7 LYS n 1 8 GLN n 1 9 LEU n 1 10 THR n 1 11 GLY n 1 12 LEU n 1 13 ARG n 1 14 PHE n 1 15 ILE n 1 16 ASP n 1 17 LEU n 1 18 PHE n 1 19 ALA n 1 20 GLY n 1 21 LEU n 1 22 GLY n 1 23 GLY n 1 24 PHE n 1 25 ARG n 1 26 LEU n 1 27 ALA n 1 28 LEU n 1 29 GLU n 1 30 SER n 1 31 CYS n 1 32 GLY n 1 33 ALA n 1 34 GLU n 1 35 CYS n 1 36 VAL n 1 37 TYR n 1 38 SER n 1 39 ASN n 1 40 GLU n 1 41 TRP n 1 42 ASP n 1 43 LYS n 1 44 TYR n 1 45 ALA n 1 46 GLN n 1 47 GLU n 1 48 VAL n 1 49 TYR n 1 50 GLU n 1 51 MET n 1 52 ASN n 1 53 PHE n 1 54 GLY n 1 55 GLU n 1 56 LYS n 1 57 PRO n 1 58 GLU n 1 59 GLY n 1 60 ASP n 1 61 ILE n 1 62 THR n 1 63 GLN n 1 64 VAL n 1 65 ASN n 1 66 GLU n 1 67 LYS n 1 68 THR n 1 69 ILE n 1 70 PRO n 1 71 ASP n 1 72 HIS n 1 73 ASP n 1 74 ILE n 1 75 LEU n 1 76 CYS n 1 77 ALA n 1 78 GLY n 1 79 PHE n 1 80 PRO n 1 81 CYS n 1 82 GLN n 1 83 ALA n 1 84 PHE n 1 85 SER n 1 86 ILE n 1 87 GLN n 1 88 GLY n 1 89 LYS n 1 90 GLN n 1 91 LYS n 1 92 GLY n 1 93 PHE n 1 94 GLU n 1 95 ASP n 1 96 SER n 1 97 ARG n 1 98 GLY n 1 99 THR n 1 100 LEU n 1 101 PHE n 1 102 PHE n 1 103 ASP n 1 104 ILE n 1 105 ALA n 1 106 ARG n 1 107 ILE n 1 108 VAL n 1 109 ARG n 1 110 GLU n 1 111 LYS n 1 112 LYS n 1 113 PRO n 1 114 LYS n 1 115 VAL n 1 116 VAL n 1 117 PHE n 1 118 MET n 1 119 GLU n 1 120 ASN n 1 121 VAL n 1 122 LYS n 1 123 ASN n 1 124 PHE n 1 125 ALA n 1 126 SER n 1 127 HIS n 1 128 ASP n 1 129 ASN n 1 130 GLY n 1 131 ASN n 1 132 THR n 1 133 LEU n 1 134 GLU n 1 135 VAL n 1 136 VAL n 1 137 LYS n 1 138 ASN n 1 139 THR n 1 140 MET n 1 141 ASN n 1 142 GLU n 1 143 LEU n 1 144 ASP n 1 145 TYR n 1 146 SER n 1 147 PHE n 1 148 HIS n 1 149 ALA n 1 150 LYS n 1 151 VAL n 1 152 LEU n 1 153 ASN n 1 154 ALA n 1 155 LEU n 1 156 ASP n 1 157 TYR n 1 158 GLY n 1 159 ILE n 1 160 PRO n 1 161 GLN n 1 162 LYS n 1 163 ARG n 1 164 GLU n 1 165 ARG n 1 166 ILE n 1 167 TYR n 1 168 MET n 1 169 ILE n 1 170 CYS n 1 171 PHE n 1 172 ARG n 1 173 ASN n 1 174 ASP n 1 175 LEU n 1 176 ASN n 1 177 ILE n 1 178 GLN n 1 179 ASN n 1 180 PHE n 1 181 GLN n 1 182 PHE n 1 183 PRO n 1 184 LYS n 1 185 PRO n 1 186 PHE n 1 187 GLU n 1 188 LEU n 1 189 ASN n 1 190 THR n 1 191 PHE n 1 192 VAL n 1 193 LYS n 1 194 ASP n 1 195 LEU n 1 196 LEU n 1 197 LEU n 1 198 PRO n 1 199 ASP n 1 200 SER n 1 201 GLU n 1 202 VAL n 1 203 GLU n 1 204 HIS n 1 205 LEU n 1 206 VAL n 1 207 ILE n 1 208 ASP n 1 209 ARG n 1 210 LYS n 1 211 ASP n 1 212 LEU n 1 213 VAL n 1 214 MET n 1 215 THR n 1 216 ASN n 1 217 GLN n 1 218 GLU n 1 219 ILE n 1 220 GLU n 1 221 GLN n 1 222 THR n 1 223 THR n 1 224 PRO n 1 225 LYS n 1 226 THR n 1 227 VAL n 1 228 ARG n 1 229 LEU n 1 230 GLY n 1 231 ILE n 1 232 VAL n 1 233 GLY n 1 234 LYS n 1 235 GLY n 1 236 GLY n 1 237 SER n 1 238 GLY n 1 239 GLU n 1 240 ARG n 1 241 ILE n 1 242 TYR n 1 243 SER n 1 244 THR n 1 245 ARG n 1 246 GLY n 1 247 ILE n 1 248 ALA n 1 249 ILE n 1 250 THR n 1 251 LEU n 1 252 SER n 1 253 ALA n 1 254 TYR n 1 255 GLY n 1 256 GLY n 1 257 GLY n 1 258 ILE n 1 259 PHE n 1 260 ALA n 1 261 LYS n 1 262 THR n 1 263 GLY n 1 264 GLY n 1 265 TYR n 1 266 LEU n 1 267 VAL n 1 268 ASN n 1 269 GLY n 1 270 LYS n 1 271 THR n 1 272 ARG n 1 273 LYS n 1 274 LEU n 1 275 HIS n 1 276 PRO n 1 277 ARG n 1 278 GLU n 1 279 CYS n 1 280 ALA n 1 281 ARG n 1 282 VAL n 1 283 MET n 1 284 GLY n 1 285 TYR n 1 286 PRO n 1 287 ASP n 1 288 SER n 1 289 TYR n 1 290 LYS n 1 291 VAL n 1 292 HIS n 1 293 PRO n 1 294 SER n 1 295 THR n 1 296 SER n 1 297 GLN n 1 298 ALA n 1 299 TYR n 1 300 LYS n 1 301 GLN n 1 302 PHE n 1 303 GLY n 1 304 ASN n 1 305 SER n 1 306 VAL n 1 307 VAL n 1 308 ILE n 1 309 ASN n 1 310 VAL n 1 311 LEU n 1 312 GLN n 1 313 TYR n 1 314 ILE n 1 315 ALA n 1 316 TYR n 1 317 ASN n 1 318 ILE n 1 319 GLY n 1 320 SER n 1 321 SER n 1 322 LEU n 1 323 ASN n 1 324 PHE n 1 325 LYS n 1 326 PRO n 1 327 TYR n 2 1 DT n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DT n 2 6 DG n 2 7 5CM n 2 8 DG n 2 9 DC n 2 10 DT n 2 11 DG n 2 12 DA n 2 13 DC n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DA n 3 5 DG n 3 6 DC n 3 7 DG n 3 8 DC n 3 9 DA n 3 10 DT n 3 11 DC n 3 12 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HAEMOPHILUS HAEMOLYTICUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 726 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ER2267 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PHH5.3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP MTH1_HAEPH 1 ? ? P05102 ? 2 PDB 2UYH 2 ? ? 2UYH ? 3 PDB 2UYH 3 ? ? 2UYH ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2UYH A 1 ? 327 ? P05102 1 ? 327 ? 1 327 2 2 2UYH C 1 ? 13 ? 2UYH 401 ? 413 ? 401 413 3 3 2UYH D 1 ? 12 ? 2UYH 422 ? 433 ? 422 433 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2UYH GLN A 87 ? UNP P05102 SER 87 'engineered mutation' 87 1 1 2UYH SER A 237 ? UNP P05102 GLN 237 'engineered mutation' 237 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2UYH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.7 _exptl_crystal.density_percent_sol 54 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '50 MM NA CITRATE PH 5.6, 1.6 M AMMONIUM SULFATE, 5% GLUCOSE' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-08-01 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.050 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X13' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X13 _diffrn_source.pdbx_wavelength 1.050 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2UYH _reflns.observed_criterion_sigma_I 1.3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 34.50 _reflns.d_resolution_high 2.63 _reflns.number_obs 16740 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.20 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.40 _reflns.B_iso_Wilson_estimate 23.5 _reflns.pdbx_redundancy 5.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.63 _reflns_shell.d_res_low 2.63 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs 0.20 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.40 _reflns_shell.pdbx_redundancy 5.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2UYH _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16696 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 37849971.32 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.40 _refine.ls_d_res_high 2.63 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.199 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.199 _refine.ls_R_factor_R_free 0.258 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.3 _refine.ls_number_reflns_R_free 1728 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 19.8 _refine.aniso_B[1][1] 1.03 _refine.aniso_B[2][2] 1.03 _refine.aniso_B[3][3] -2.06 _refine.aniso_B[1][2] 5.83 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.433785 _refine.solvent_model_param_bsol 55.2546 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'RESOLUTION-DEPENDENT WEIGHTING SCHEME USED. BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRY 3MHT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2UYH _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.33 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.40 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2606 _refine_hist.pdbx_number_atoms_nucleic_acid 511 _refine_hist.pdbx_number_atoms_ligand 46 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 3252 _refine_hist.d_res_high 2.63 _refine_hist.d_res_low 28.40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.01 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.51 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.38 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.66 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.68 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.63 _refine_ls_shell.d_res_low 2.79 _refine_ls_shell.number_reflns_R_work 2414 _refine_ls_shell.R_factor_R_work 0.244 _refine_ls_shell.percent_reflns_obs 98.9 _refine_ls_shell.R_factor_R_free 0.307 _refine_ls_shell.R_factor_R_free_error 0.018 _refine_ls_shell.percent_reflns_R_free 10.9 _refine_ls_shell.number_reflns_R_free 295 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 2AP.PAR 2AP.TOP 'X-RAY DIFFRACTION' 5 5MC.PAR 5MC.TOP 'X-RAY DIFFRACTION' 6 SAH.PAR SAH.TOP 'X-RAY DIFFRACTION' 7 SO4.PAR SO4.TOP # _struct.entry_id 2UYH _struct.title 'HhaI DNA methyltransferase S87Q-Q237S mutant complex with 13mer GCGC- GMGC oligonucleotide and SAH' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2UYH _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'TRANSFERASE, S-ADENOSYL-L-METHIONINE, BASE FLIPPING, METHYLTRANSFERASE, RESTRICTION SYSTEM, DNA METHYLTRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 22 ? SER A 30 ? GLY A 22 SER A 30 1 ? 9 HELX_P HELX_P2 2 ASP A 42 ? GLY A 54 ? ASP A 42 GLY A 54 1 ? 13 HELX_P HELX_P3 3 ASP A 60 ? VAL A 64 ? ASP A 60 VAL A 64 5 ? 5 HELX_P HELX_P4 4 LYS A 91 ? ASP A 95 ? LYS A 91 ASP A 95 5 ? 5 HELX_P HELX_P5 5 LEU A 100 ? LYS A 112 ? LEU A 100 LYS A 112 1 ? 13 HELX_P HELX_P6 6 ASN A 123 ? ALA A 125 ? ASN A 123 ALA A 125 5 ? 3 HELX_P HELX_P7 7 SER A 126 ? LEU A 143 ? SER A 126 LEU A 143 1 ? 18 HELX_P HELX_P8 8 LEU A 155 ? GLY A 158 ? LEU A 155 GLY A 158 5 ? 4 HELX_P HELX_P9 9 ASN A 173 ? ASN A 176 ? ASN A 173 ASN A 176 5 ? 4 HELX_P HELX_P10 10 PHE A 191 ? LEU A 195 ? PHE A 191 LEU A 195 5 ? 5 HELX_P HELX_P11 11 PRO A 198 ? VAL A 202 ? PRO A 198 VAL A 202 5 ? 5 HELX_P HELX_P12 12 HIS A 275 ? VAL A 282 ? HIS A 275 VAL A 282 1 ? 8 HELX_P HELX_P13 13 SER A 294 ? SER A 305 ? SER A 294 SER A 305 1 ? 12 HELX_P HELX_P14 14 VAL A 307 ? ASN A 323 ? VAL A 307 ASN A 323 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DG 6 "O3'" ? ? ? 1_555 B 5CM 7 P ? ? C DG 406 C 5CM 407 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale2 covale both ? B 5CM 7 "O3'" ? ? ? 1_555 B DG 8 P ? ? C 5CM 407 C DG 408 1_555 ? ? ? ? ? ? ? 1.600 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 12 N3 ? ? C DG 402 D DC 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 12 O2 ? ? C DG 402 D DC 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 12 N4 ? ? C DG 402 D DC 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 11 N3 ? ? C DG 403 D DC 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 11 O2 ? ? C DG 403 D DC 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 11 N4 ? ? C DG 403 D DC 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 10 N3 ? ? C DA 404 D DT 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 10 O4 ? ? C DA 404 D DT 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 9 N1 ? ? C DT 405 D DA 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 9 N6 ? ? C DT 405 D DA 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 8 N3 ? ? C DG 406 D DC 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 8 O2 ? ? C DG 406 D DC 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 8 N4 ? ? C DG 406 D DC 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B 5CM 7 N3 ? ? ? 1_555 C DG 7 N1 ? ? C 5CM 407 D DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B 5CM 7 N4 ? ? ? 1_555 C DG 7 O6 ? ? C 5CM 407 D DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B 5CM 7 O2 ? ? ? 1_555 C DG 7 N2 ? ? C 5CM 407 D DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 5 N1 ? ? C DC 409 D DG 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 5 O6 ? ? C DC 409 D DG 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 5 N2 ? ? C DC 409 D DG 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 4 N1 ? ? C DT 410 D DA 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 4 N6 ? ? C DT 410 D DA 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 3 N3 ? ? C DG 411 D DC 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 3 O2 ? ? C DG 411 D DC 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 3 N4 ? ? C DG 411 D DC 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 2 N3 ? ? C DA 412 D DT 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 2 O4 ? ? C DA 412 D DT 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 1 O6 ? ? C DC 413 D DG 422 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? parallel AB 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLU A 34 ? ASN A 39 ? GLU A 34 ASN A 39 AA 2 ARG A 13 ? LEU A 17 ? ARG A 13 LEU A 17 AA 3 ILE A 74 ? ALA A 77 ? ILE A 74 ALA A 77 AA 4 VAL A 115 ? VAL A 121 ? VAL A 115 VAL A 121 AA 5 GLU A 164 ? PHE A 171 ? GLU A 164 PHE A 171 AA 6 HIS A 148 ? ASN A 153 ? HIS A 148 ASN A 153 AB 1 ARG A 228 ? ILE A 231 ? ARG A 228 ILE A 231 AB 2 ARG A 240 ? SER A 243 ? ARG A 240 SER A 243 AB 3 GLY A 264 ? VAL A 267 ? GLY A 264 VAL A 267 AB 4 LYS A 270 ? LYS A 273 ? LYS A 270 LYS A 273 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N VAL A 36 ? N VAL A 36 O PHE A 14 ? O PHE A 14 AA 2 3 N ILE A 15 ? N ILE A 15 O ILE A 74 ? O ILE A 74 AA 3 4 N LEU A 75 ? N LEU A 75 O VAL A 115 ? O VAL A 115 AA 4 5 N ASN A 120 ? N ASN A 120 O ILE A 166 ? O ILE A 166 AA 5 6 N ILE A 169 ? N ILE A 169 O HIS A 148 ? O HIS A 148 AB 1 2 N LEU A 229 ? N LEU A 229 O ILE A 241 ? O ILE A 241 AB 2 3 N TYR A 242 ? N TYR A 242 O GLY A 264 ? O GLY A 264 AB 3 4 N VAL A 267 ? N VAL A 267 O LYS A 270 ? O LYS A 270 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 18 'BINDING SITE FOR RESIDUE SAH A1328' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A1329' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A1330' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A1331' AC5 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE SO4 A1332' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 PHE A 18 ? PHE A 18 . ? 1_555 ? 2 AC1 18 ALA A 19 ? ALA A 19 . ? 1_555 ? 3 AC1 18 LEU A 21 ? LEU A 21 . ? 1_555 ? 4 AC1 18 GLY A 23 ? GLY A 23 . ? 1_555 ? 5 AC1 18 ASN A 39 ? ASN A 39 . ? 1_555 ? 6 AC1 18 GLU A 40 ? GLU A 40 . ? 1_555 ? 7 AC1 18 TRP A 41 ? TRP A 41 . ? 1_555 ? 8 AC1 18 ASP A 42 ? ASP A 42 . ? 1_555 ? 9 AC1 18 ASP A 60 ? ASP A 60 . ? 1_555 ? 10 AC1 18 ILE A 61 ? ILE A 61 . ? 1_555 ? 11 AC1 18 GLY A 78 ? GLY A 78 . ? 1_555 ? 12 AC1 18 ASN A 304 ? ASN A 304 . ? 1_555 ? 13 AC1 18 SER A 305 ? SER A 305 . ? 1_555 ? 14 AC1 18 VAL A 306 ? VAL A 306 . ? 1_555 ? 15 AC1 18 HOH I . ? HOH A 2026 . ? 1_555 ? 16 AC1 18 HOH I . ? HOH A 2068 . ? 1_555 ? 17 AC1 18 HOH I . ? HOH A 2069 . ? 1_555 ? 18 AC1 18 HOH I . ? HOH A 2077 . ? 1_555 ? 19 AC2 4 PRO A 198 ? PRO A 198 . ? 1_555 ? 20 AC2 4 ASP A 199 ? ASP A 199 . ? 1_555 ? 21 AC2 4 HOH I . ? HOH A 2078 . ? 1_555 ? 22 AC2 4 HOH I . ? HOH A 2079 . ? 1_555 ? 23 AC3 3 PRO A 286 ? PRO A 286 . ? 1_555 ? 24 AC3 3 ASP A 287 ? ASP A 287 . ? 1_555 ? 25 AC3 3 SER A 288 ? SER A 288 . ? 1_555 ? 26 AC4 3 LYS A 193 ? LYS A 193 . ? 1_555 ? 27 AC4 3 ARG A 245 ? ARG A 245 . ? 1_555 ? 28 AC4 3 LYS A 290 ? LYS A 290 . ? 1_555 ? 29 AC5 2 LYS A 114 ? LYS A 114 . ? 1_555 ? 30 AC5 2 ARG A 172 ? ARG A 172 . ? 1_555 ? # _database_PDB_matrix.entry_id 2UYH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2UYH _atom_sites.fract_transf_matrix[1][1] 0.010484 _atom_sites.fract_transf_matrix[1][2] 0.006053 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012106 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003195 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 CYS 31 31 31 CYS CYS A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 CYS 35 35 35 CYS CYS A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 MET 51 51 51 MET MET A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 CYS 81 81 81 CYS CYS A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 PHE 93 93 93 PHE PHE A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 PHE 117 117 117 PHE PHE A . n A 1 118 MET 118 118 118 MET MET A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 LYS 122 122 122 LYS LYS A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 PHE 124 124 124 PHE PHE A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 HIS 127 127 127 HIS HIS A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 ASN 131 131 131 ASN ASN A . n A 1 132 THR 132 132 132 THR THR A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 ASN 138 138 138 ASN ASN A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 MET 140 140 140 MET MET A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 TYR 145 145 145 TYR TYR A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 PHE 147 147 147 PHE PHE A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 LYS 150 150 150 LYS LYS A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 ASN 153 153 153 ASN ASN A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 TYR 157 157 157 TYR TYR A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 ARG 163 163 163 ARG ARG A . n A 1 164 GLU 164 164 164 GLU GLU A . n A 1 165 ARG 165 165 165 ARG ARG A . n A 1 166 ILE 166 166 166 ILE ILE A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 MET 168 168 168 MET MET A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 CYS 170 170 170 CYS CYS A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 ASN 173 173 173 ASN ASN A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 ASN 176 176 176 ASN ASN A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 ASN 179 179 179 ASN ASN A . n A 1 180 PHE 180 180 180 PHE PHE A . n A 1 181 GLN 181 181 181 GLN GLN A . n A 1 182 PHE 182 182 182 PHE PHE A . n A 1 183 PRO 183 183 183 PRO PRO A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 PRO 185 185 185 PRO PRO A . n A 1 186 PHE 186 186 186 PHE PHE A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 LEU 188 188 188 LEU LEU A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 PHE 191 191 191 PHE PHE A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 LYS 193 193 193 LYS LYS A . n A 1 194 ASP 194 194 194 ASP ASP A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 SER 200 200 200 SER SER A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 VAL 202 202 202 VAL VAL A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 HIS 204 204 204 HIS HIS A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 VAL 206 206 206 VAL VAL A . n A 1 207 ILE 207 207 207 ILE ILE A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 ARG 209 209 209 ARG ARG A . n A 1 210 LYS 210 210 210 LYS LYS A . n A 1 211 ASP 211 211 211 ASP ASP A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 MET 214 214 214 MET MET A . n A 1 215 THR 215 215 215 THR THR A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 GLU 220 220 220 GLU GLU A . n A 1 221 GLN 221 221 221 GLN GLN A . n A 1 222 THR 222 222 222 THR THR A . n A 1 223 THR 223 223 223 THR THR A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 LYS 225 225 225 LYS LYS A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 VAL 227 227 227 VAL VAL A . n A 1 228 ARG 228 228 228 ARG ARG A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 GLY 230 230 230 GLY GLY A . n A 1 231 ILE 231 231 231 ILE ILE A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 GLY 233 233 233 GLY GLY A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 GLY 235 235 235 GLY GLY A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 SER 237 237 237 SER SER A . n A 1 238 GLY 238 238 238 GLY GLY A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 ARG 240 240 240 ARG ARG A . n A 1 241 ILE 241 241 241 ILE ILE A . n A 1 242 TYR 242 242 242 TYR TYR A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 ARG 245 245 245 ARG ARG A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 ILE 247 247 247 ILE ILE A . n A 1 248 ALA 248 248 248 ALA ALA A . n A 1 249 ILE 249 249 249 ILE ILE A . n A 1 250 THR 250 250 250 THR THR A . n A 1 251 LEU 251 251 251 LEU LEU A . n A 1 252 SER 252 252 252 SER SER A . n A 1 253 ALA 253 253 253 ALA ALA A . n A 1 254 TYR 254 254 254 TYR TYR A . n A 1 255 GLY 255 255 255 GLY GLY A . n A 1 256 GLY 256 256 256 GLY GLY A . n A 1 257 GLY 257 257 257 GLY GLY A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 PHE 259 259 259 PHE PHE A . n A 1 260 ALA 260 260 260 ALA ALA A . n A 1 261 LYS 261 261 261 LYS LYS A . n A 1 262 THR 262 262 262 THR THR A . n A 1 263 GLY 263 263 263 GLY GLY A . n A 1 264 GLY 264 264 264 GLY GLY A . n A 1 265 TYR 265 265 265 TYR TYR A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 VAL 267 267 267 VAL VAL A . n A 1 268 ASN 268 268 268 ASN ASN A . n A 1 269 GLY 269 269 269 GLY GLY A . n A 1 270 LYS 270 270 270 LYS LYS A . n A 1 271 THR 271 271 271 THR THR A . n A 1 272 ARG 272 272 272 ARG ARG A . n A 1 273 LYS 273 273 273 LYS LYS A . n A 1 274 LEU 274 274 274 LEU LEU A . n A 1 275 HIS 275 275 275 HIS HIS A . n A 1 276 PRO 276 276 276 PRO PRO A . n A 1 277 ARG 277 277 277 ARG ARG A . n A 1 278 GLU 278 278 278 GLU GLU A . n A 1 279 CYS 279 279 279 CYS CYS A . n A 1 280 ALA 280 280 280 ALA ALA A . n A 1 281 ARG 281 281 281 ARG ARG A . n A 1 282 VAL 282 282 282 VAL VAL A . n A 1 283 MET 283 283 283 MET MET A . n A 1 284 GLY 284 284 284 GLY GLY A . n A 1 285 TYR 285 285 285 TYR TYR A . n A 1 286 PRO 286 286 286 PRO PRO A . n A 1 287 ASP 287 287 287 ASP ASP A . n A 1 288 SER 288 288 288 SER SER A . n A 1 289 TYR 289 289 289 TYR TYR A . n A 1 290 LYS 290 290 290 LYS LYS A . n A 1 291 VAL 291 291 291 VAL VAL A . n A 1 292 HIS 292 292 292 HIS HIS A . n A 1 293 PRO 293 293 293 PRO PRO A . n A 1 294 SER 294 294 294 SER SER A . n A 1 295 THR 295 295 295 THR THR A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 GLN 297 297 297 GLN GLN A . n A 1 298 ALA 298 298 298 ALA ALA A . n A 1 299 TYR 299 299 299 TYR TYR A . n A 1 300 LYS 300 300 300 LYS LYS A . n A 1 301 GLN 301 301 301 GLN GLN A . n A 1 302 PHE 302 302 302 PHE PHE A . n A 1 303 GLY 303 303 303 GLY GLY A . n A 1 304 ASN 304 304 304 ASN ASN A . n A 1 305 SER 305 305 305 SER SER A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 VAL 307 307 307 VAL VAL A . n A 1 308 ILE 308 308 308 ILE ILE A . n A 1 309 ASN 309 309 309 ASN ASN A . n A 1 310 VAL 310 310 310 VAL VAL A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 GLN 312 312 312 GLN GLN A . n A 1 313 TYR 313 313 313 TYR TYR A . n A 1 314 ILE 314 314 314 ILE ILE A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 TYR 316 316 316 TYR TYR A . n A 1 317 ASN 317 317 317 ASN ASN A . n A 1 318 ILE 318 318 318 ILE ILE A . n A 1 319 GLY 319 319 319 GLY GLY A . n A 1 320 SER 320 320 320 SER SER A . n A 1 321 SER 321 321 321 SER SER A . n A 1 322 LEU 322 322 322 LEU LEU A . n A 1 323 ASN 323 323 323 ASN ASN A . n A 1 324 PHE 324 324 324 PHE PHE A . n A 1 325 LYS 325 325 325 LYS LYS A . n A 1 326 PRO 326 326 326 PRO PRO A . n A 1 327 TYR 327 327 327 TYR TYR A . n B 2 1 DT 1 401 401 DT DT C . n B 2 2 DG 2 402 402 DG DG C . n B 2 3 DG 3 403 403 DG DG C . n B 2 4 DA 4 404 404 DA DA C . n B 2 5 DT 5 405 405 DT DT C . n B 2 6 DG 6 406 406 DG DG C . n B 2 7 5CM 7 407 407 5CM 5CM C . n B 2 8 DG 8 408 408 DG DG C . n B 2 9 DC 9 409 409 DC DC C . n B 2 10 DT 10 410 410 DT DT C . n B 2 11 DG 11 411 411 DG DG C . n B 2 12 DA 12 412 412 DA DA C . n B 2 13 DC 13 413 413 DC DC C . n C 3 1 DG 1 422 422 DG DG D . n C 3 2 DT 2 423 423 DT DT D . n C 3 3 DC 3 424 424 DC DC D . n C 3 4 DA 4 425 425 DA DA D . n C 3 5 DG 5 426 426 DG DG D . n C 3 6 DC 6 427 427 DC DC D . n C 3 7 DG 7 428 428 DG DG D . n C 3 8 DC 8 429 429 DC DC D . n C 3 9 DA 9 430 430 DA DA D . n C 3 10 DT 10 431 431 DT DT D . n C 3 11 DC 11 432 432 DC DC D . n C 3 12 DC 12 433 433 DC DC D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SAH 1 1328 1328 SAH SAH A . E 5 SO4 1 1329 1329 SO4 SO4 A . F 5 SO4 1 1330 1330 SO4 SO4 A . G 5 SO4 1 1331 1331 SO4 SO4 A . H 5 SO4 1 1332 1332 SO4 SO4 A . I 6 HOH 1 2001 2001 HOH HOH A . I 6 HOH 2 2002 2002 HOH HOH A . I 6 HOH 3 2003 2003 HOH HOH A . I 6 HOH 4 2004 2004 HOH HOH A . I 6 HOH 5 2005 2005 HOH HOH A . I 6 HOH 6 2006 2006 HOH HOH A . I 6 HOH 7 2007 2007 HOH HOH A . I 6 HOH 8 2008 2008 HOH HOH A . I 6 HOH 9 2009 2009 HOH HOH A . I 6 HOH 10 2010 2010 HOH HOH A . I 6 HOH 11 2011 2011 HOH HOH A . I 6 HOH 12 2012 2012 HOH HOH A . I 6 HOH 13 2013 2013 HOH HOH A . I 6 HOH 14 2014 2014 HOH HOH A . I 6 HOH 15 2015 2015 HOH HOH A . I 6 HOH 16 2016 2016 HOH HOH A . I 6 HOH 17 2017 2017 HOH HOH A . I 6 HOH 18 2018 2018 HOH HOH A . I 6 HOH 19 2019 2019 HOH HOH A . I 6 HOH 20 2020 2020 HOH HOH A . I 6 HOH 21 2021 2021 HOH HOH A . I 6 HOH 22 2022 2022 HOH HOH A . I 6 HOH 23 2023 2023 HOH HOH A . I 6 HOH 24 2024 2024 HOH HOH A . I 6 HOH 25 2025 2025 HOH HOH A . I 6 HOH 26 2026 2026 HOH HOH A . I 6 HOH 27 2027 2027 HOH HOH A . I 6 HOH 28 2028 2028 HOH HOH A . I 6 HOH 29 2029 2029 HOH HOH A . I 6 HOH 30 2030 2030 HOH HOH A . I 6 HOH 31 2031 2031 HOH HOH A . I 6 HOH 32 2032 2032 HOH HOH A . I 6 HOH 33 2033 2033 HOH HOH A . I 6 HOH 34 2034 2034 HOH HOH A . I 6 HOH 35 2035 2035 HOH HOH A . I 6 HOH 36 2036 2036 HOH HOH A . I 6 HOH 37 2037 2037 HOH HOH A . I 6 HOH 38 2038 2038 HOH HOH A . I 6 HOH 39 2039 2039 HOH HOH A . I 6 HOH 40 2040 2040 HOH HOH A . I 6 HOH 41 2041 2041 HOH HOH A . I 6 HOH 42 2042 2042 HOH HOH A . I 6 HOH 43 2043 2043 HOH HOH A . I 6 HOH 44 2044 2044 HOH HOH A . I 6 HOH 45 2045 2045 HOH HOH A . I 6 HOH 46 2046 2046 HOH HOH A . I 6 HOH 47 2047 2047 HOH HOH A . I 6 HOH 48 2048 2048 HOH HOH A . I 6 HOH 49 2049 2049 HOH HOH A . I 6 HOH 50 2050 2050 HOH HOH A . I 6 HOH 51 2051 2051 HOH HOH A . I 6 HOH 52 2052 2052 HOH HOH A . I 6 HOH 53 2053 2053 HOH HOH A . I 6 HOH 54 2054 2054 HOH HOH A . I 6 HOH 55 2055 2055 HOH HOH A . I 6 HOH 56 2056 2056 HOH HOH A . I 6 HOH 57 2057 2057 HOH HOH A . I 6 HOH 58 2058 2058 HOH HOH A . I 6 HOH 59 2059 2059 HOH HOH A . I 6 HOH 60 2060 2060 HOH HOH A . I 6 HOH 61 2061 2061 HOH HOH A . I 6 HOH 62 2062 2062 HOH HOH A . I 6 HOH 63 2063 2063 HOH HOH A . I 6 HOH 64 2064 2064 HOH HOH A . I 6 HOH 65 2065 2065 HOH HOH A . I 6 HOH 66 2066 2066 HOH HOH A . I 6 HOH 67 2067 2067 HOH HOH A . I 6 HOH 68 2068 2068 HOH HOH A . I 6 HOH 69 2069 2069 HOH HOH A . I 6 HOH 70 2070 2070 HOH HOH A . I 6 HOH 71 2071 2071 HOH HOH A . I 6 HOH 72 2072 2072 HOH HOH A . I 6 HOH 73 2073 2073 HOH HOH A . I 6 HOH 74 2074 2074 HOH HOH A . I 6 HOH 75 2075 2075 HOH HOH A . I 6 HOH 76 2076 2076 HOH HOH A . I 6 HOH 77 2077 2077 HOH HOH A . I 6 HOH 78 2078 2078 HOH HOH A . I 6 HOH 79 2079 2079 HOH HOH A . J 6 HOH 1 2001 2001 HOH HOH C . J 6 HOH 2 2002 2002 HOH HOH C . J 6 HOH 3 2003 2003 HOH HOH C . J 6 HOH 4 2004 2004 HOH HOH C . J 6 HOH 5 2005 2005 HOH HOH C . K 6 HOH 1 2001 2001 HOH HOH D . K 6 HOH 2 2002 2002 HOH HOH D . K 6 HOH 3 2003 2003 HOH HOH D . K 6 HOH 4 2004 2004 HOH HOH D . K 6 HOH 5 2005 2005 HOH HOH D . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id 5CM _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id 5CM _pdbx_struct_mod_residue.auth_seq_id 407 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5720 ? 1 MORE -49.4 ? 1 'SSA (A^2)' 16030 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-27 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' Other 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_source 2 4 'Structure model' struct_conn 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_database_status 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 AMoRE phasing . ? 4 # _pdbx_entry_details.entry_id 2UYH _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, SER 87 TO GLN ENGINEERED RESIDUE IN CHAIN A, GLN 237 TO SER ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'MUTATIONS S87Q AND Q237S' _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 422 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 422 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.524 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.083 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 16 ? ? -102.85 79.48 2 1 ALA A 19 ? ? -26.68 -54.11 3 1 GLU A 55 ? ? -45.10 158.16 4 1 ASP A 60 ? ? -10.94 107.32 5 1 PRO A 80 ? ? -46.70 163.54 6 1 CYS A 81 ? ? -143.49 -10.24 7 1 GLN A 90 ? ? 39.86 36.97 8 1 LYS A 112 ? ? 28.36 68.47 9 1 ASP A 144 ? ? 74.03 49.05 10 1 PRO A 160 ? ? -68.50 76.42 11 1 LYS A 210 ? ? -47.72 -16.80 12 1 MET A 214 ? ? -56.49 102.20 13 1 PHE A 259 ? ? -102.54 45.44 14 1 LYS A 261 ? ? 66.03 -23.56 15 1 ASN A 268 ? ? 39.02 65.14 16 1 SER A 305 ? ? -72.13 -169.16 17 1 LEU A 322 ? ? -35.89 -32.90 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG D 422 ? ? 0.052 'SIDE CHAIN' 2 1 DC D 432 ? ? 0.075 'SIDE CHAIN' 3 1 DC D 433 ? ? 0.064 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 DA OP3 O N N 125 DA P P N N 126 DA OP1 O N N 127 DA OP2 O N N 128 DA "O5'" O N N 129 DA "C5'" C N N 130 DA "C4'" C N R 131 DA "O4'" O N N 132 DA "C3'" C N S 133 DA "O3'" O N N 134 DA "C2'" C N N 135 DA "C1'" C N R 136 DA N9 N Y N 137 DA C8 C Y N 138 DA N7 N Y N 139 DA C5 C Y N 140 DA C6 C Y N 141 DA N6 N N N 142 DA N1 N Y N 143 DA C2 C Y N 144 DA N3 N Y N 145 DA C4 C Y N 146 DA HOP3 H N N 147 DA HOP2 H N N 148 DA "H5'" H N N 149 DA "H5''" H N N 150 DA "H4'" H N N 151 DA "H3'" H N N 152 DA "HO3'" H N N 153 DA "H2'" H N N 154 DA "H2''" H N N 155 DA "H1'" H N N 156 DA H8 H N N 157 DA H61 H N N 158 DA H62 H N N 159 DA H2 H N N 160 DC OP3 O N N 161 DC P P N N 162 DC OP1 O N N 163 DC OP2 O N N 164 DC "O5'" O N N 165 DC "C5'" C N N 166 DC "C4'" C N R 167 DC "O4'" O N N 168 DC "C3'" C N S 169 DC "O3'" O N N 170 DC "C2'" C N N 171 DC "C1'" C N R 172 DC N1 N N N 173 DC C2 C N N 174 DC O2 O N N 175 DC N3 N N N 176 DC C4 C N N 177 DC N4 N N N 178 DC C5 C N N 179 DC C6 C N N 180 DC HOP3 H N N 181 DC HOP2 H N N 182 DC "H5'" H N N 183 DC "H5''" H N N 184 DC "H4'" H N N 185 DC "H3'" H N N 186 DC "HO3'" H N N 187 DC "H2'" H N N 188 DC "H2''" H N N 189 DC "H1'" H N N 190 DC H41 H N N 191 DC H42 H N N 192 DC H5 H N N 193 DC H6 H N N 194 DG OP3 O N N 195 DG P P N N 196 DG OP1 O N N 197 DG OP2 O N N 198 DG "O5'" O N N 199 DG "C5'" C N N 200 DG "C4'" C N R 201 DG "O4'" O N N 202 DG "C3'" C N S 203 DG "O3'" O N N 204 DG "C2'" C N N 205 DG "C1'" C N R 206 DG N9 N Y N 207 DG C8 C Y N 208 DG N7 N Y N 209 DG C5 C Y N 210 DG C6 C N N 211 DG O6 O N N 212 DG N1 N N N 213 DG C2 C N N 214 DG N2 N N N 215 DG N3 N N N 216 DG C4 C Y N 217 DG HOP3 H N N 218 DG HOP2 H N N 219 DG "H5'" H N N 220 DG "H5''" H N N 221 DG "H4'" H N N 222 DG "H3'" H N N 223 DG "HO3'" H N N 224 DG "H2'" H N N 225 DG "H2''" H N N 226 DG "H1'" H N N 227 DG H8 H N N 228 DG H1 H N N 229 DG H21 H N N 230 DG H22 H N N 231 DT OP3 O N N 232 DT P P N N 233 DT OP1 O N N 234 DT OP2 O N N 235 DT "O5'" O N N 236 DT "C5'" C N N 237 DT "C4'" C N R 238 DT "O4'" O N N 239 DT "C3'" C N S 240 DT "O3'" O N N 241 DT "C2'" C N N 242 DT "C1'" C N R 243 DT N1 N N N 244 DT C2 C N N 245 DT O2 O N N 246 DT N3 N N N 247 DT C4 C N N 248 DT O4 O N N 249 DT C5 C N N 250 DT C7 C N N 251 DT C6 C N N 252 DT HOP3 H N N 253 DT HOP2 H N N 254 DT "H5'" H N N 255 DT "H5''" H N N 256 DT "H4'" H N N 257 DT "H3'" H N N 258 DT "HO3'" H N N 259 DT "H2'" H N N 260 DT "H2''" H N N 261 DT "H1'" H N N 262 DT H3 H N N 263 DT H71 H N N 264 DT H72 H N N 265 DT H73 H N N 266 DT H6 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 HIS N N N N 317 HIS CA C N S 318 HIS C C N N 319 HIS O O N N 320 HIS CB C N N 321 HIS CG C Y N 322 HIS ND1 N Y N 323 HIS CD2 C Y N 324 HIS CE1 C Y N 325 HIS NE2 N Y N 326 HIS OXT O N N 327 HIS H H N N 328 HIS H2 H N N 329 HIS HA H N N 330 HIS HB2 H N N 331 HIS HB3 H N N 332 HIS HD1 H N N 333 HIS HD2 H N N 334 HIS HE1 H N N 335 HIS HE2 H N N 336 HIS HXT H N N 337 HOH O O N N 338 HOH H1 H N N 339 HOH H2 H N N 340 ILE N N N N 341 ILE CA C N S 342 ILE C C N N 343 ILE O O N N 344 ILE CB C N S 345 ILE CG1 C N N 346 ILE CG2 C N N 347 ILE CD1 C N N 348 ILE OXT O N N 349 ILE H H N N 350 ILE H2 H N N 351 ILE HA H N N 352 ILE HB H N N 353 ILE HG12 H N N 354 ILE HG13 H N N 355 ILE HG21 H N N 356 ILE HG22 H N N 357 ILE HG23 H N N 358 ILE HD11 H N N 359 ILE HD12 H N N 360 ILE HD13 H N N 361 ILE HXT H N N 362 LEU N N N N 363 LEU CA C N S 364 LEU C C N N 365 LEU O O N N 366 LEU CB C N N 367 LEU CG C N N 368 LEU CD1 C N N 369 LEU CD2 C N N 370 LEU OXT O N N 371 LEU H H N N 372 LEU H2 H N N 373 LEU HA H N N 374 LEU HB2 H N N 375 LEU HB3 H N N 376 LEU HG H N N 377 LEU HD11 H N N 378 LEU HD12 H N N 379 LEU HD13 H N N 380 LEU HD21 H N N 381 LEU HD22 H N N 382 LEU HD23 H N N 383 LEU HXT H N N 384 LYS N N N N 385 LYS CA C N S 386 LYS C C N N 387 LYS O O N N 388 LYS CB C N N 389 LYS CG C N N 390 LYS CD C N N 391 LYS CE C N N 392 LYS NZ N N N 393 LYS OXT O N N 394 LYS H H N N 395 LYS H2 H N N 396 LYS HA H N N 397 LYS HB2 H N N 398 LYS HB3 H N N 399 LYS HG2 H N N 400 LYS HG3 H N N 401 LYS HD2 H N N 402 LYS HD3 H N N 403 LYS HE2 H N N 404 LYS HE3 H N N 405 LYS HZ1 H N N 406 LYS HZ2 H N N 407 LYS HZ3 H N N 408 LYS HXT H N N 409 MET N N N N 410 MET CA C N S 411 MET C C N N 412 MET O O N N 413 MET CB C N N 414 MET CG C N N 415 MET SD S N N 416 MET CE C N N 417 MET OXT O N N 418 MET H H N N 419 MET H2 H N N 420 MET HA H N N 421 MET HB2 H N N 422 MET HB3 H N N 423 MET HG2 H N N 424 MET HG3 H N N 425 MET HE1 H N N 426 MET HE2 H N N 427 MET HE3 H N N 428 MET HXT H N N 429 PHE N N N N 430 PHE CA C N S 431 PHE C C N N 432 PHE O O N N 433 PHE CB C N N 434 PHE CG C Y N 435 PHE CD1 C Y N 436 PHE CD2 C Y N 437 PHE CE1 C Y N 438 PHE CE2 C Y N 439 PHE CZ C Y N 440 PHE OXT O N N 441 PHE H H N N 442 PHE H2 H N N 443 PHE HA H N N 444 PHE HB2 H N N 445 PHE HB3 H N N 446 PHE HD1 H N N 447 PHE HD2 H N N 448 PHE HE1 H N N 449 PHE HE2 H N N 450 PHE HZ H N N 451 PHE HXT H N N 452 PRO N N N N 453 PRO CA C N S 454 PRO C C N N 455 PRO O O N N 456 PRO CB C N N 457 PRO CG C N N 458 PRO CD C N N 459 PRO OXT O N N 460 PRO H H N N 461 PRO HA H N N 462 PRO HB2 H N N 463 PRO HB3 H N N 464 PRO HG2 H N N 465 PRO HG3 H N N 466 PRO HD2 H N N 467 PRO HD3 H N N 468 PRO HXT H N N 469 SAH N N N N 470 SAH CA C N S 471 SAH CB C N N 472 SAH CG C N N 473 SAH SD S N N 474 SAH C C N N 475 SAH O O N N 476 SAH OXT O N N 477 SAH "C5'" C N N 478 SAH "C4'" C N S 479 SAH "O4'" O N N 480 SAH "C3'" C N S 481 SAH "O3'" O N N 482 SAH "C2'" C N R 483 SAH "O2'" O N N 484 SAH "C1'" C N R 485 SAH N9 N Y N 486 SAH C8 C Y N 487 SAH N7 N Y N 488 SAH C5 C Y N 489 SAH C6 C Y N 490 SAH N6 N N N 491 SAH N1 N Y N 492 SAH C2 C Y N 493 SAH N3 N Y N 494 SAH C4 C Y N 495 SAH HN1 H N N 496 SAH HN2 H N N 497 SAH HA H N N 498 SAH HB1 H N N 499 SAH HB2 H N N 500 SAH HG1 H N N 501 SAH HG2 H N N 502 SAH HXT H N N 503 SAH "H5'1" H N N 504 SAH "H5'2" H N N 505 SAH "H4'" H N N 506 SAH "H3'" H N N 507 SAH "HO3'" H N N 508 SAH "H2'" H N N 509 SAH "HO2'" H N N 510 SAH "H1'" H N N 511 SAH H8 H N N 512 SAH HN61 H N N 513 SAH HN62 H N N 514 SAH H2 H N N 515 SER N N N N 516 SER CA C N S 517 SER C C N N 518 SER O O N N 519 SER CB C N N 520 SER OG O N N 521 SER OXT O N N 522 SER H H N N 523 SER H2 H N N 524 SER HA H N N 525 SER HB2 H N N 526 SER HB3 H N N 527 SER HG H N N 528 SER HXT H N N 529 SO4 S S N N 530 SO4 O1 O N N 531 SO4 O2 O N N 532 SO4 O3 O N N 533 SO4 O4 O N N 534 THR N N N N 535 THR CA C N S 536 THR C C N N 537 THR O O N N 538 THR CB C N R 539 THR OG1 O N N 540 THR CG2 C N N 541 THR OXT O N N 542 THR H H N N 543 THR H2 H N N 544 THR HA H N N 545 THR HB H N N 546 THR HG1 H N N 547 THR HG21 H N N 548 THR HG22 H N N 549 THR HG23 H N N 550 THR HXT H N N 551 TRP N N N N 552 TRP CA C N S 553 TRP C C N N 554 TRP O O N N 555 TRP CB C N N 556 TRP CG C Y N 557 TRP CD1 C Y N 558 TRP CD2 C Y N 559 TRP NE1 N Y N 560 TRP CE2 C Y N 561 TRP CE3 C Y N 562 TRP CZ2 C Y N 563 TRP CZ3 C Y N 564 TRP CH2 C Y N 565 TRP OXT O N N 566 TRP H H N N 567 TRP H2 H N N 568 TRP HA H N N 569 TRP HB2 H N N 570 TRP HB3 H N N 571 TRP HD1 H N N 572 TRP HE1 H N N 573 TRP HE3 H N N 574 TRP HZ2 H N N 575 TRP HZ3 H N N 576 TRP HH2 H N N 577 TRP HXT H N N 578 TYR N N N N 579 TYR CA C N S 580 TYR C C N N 581 TYR O O N N 582 TYR CB C N N 583 TYR CG C Y N 584 TYR CD1 C Y N 585 TYR CD2 C Y N 586 TYR CE1 C Y N 587 TYR CE2 C Y N 588 TYR CZ C Y N 589 TYR OH O N N 590 TYR OXT O N N 591 TYR H H N N 592 TYR H2 H N N 593 TYR HA H N N 594 TYR HB2 H N N 595 TYR HB3 H N N 596 TYR HD1 H N N 597 TYR HD2 H N N 598 TYR HE1 H N N 599 TYR HE2 H N N 600 TYR HH H N N 601 TYR HXT H N N 602 VAL N N N N 603 VAL CA C N S 604 VAL C C N N 605 VAL O O N N 606 VAL CB C N N 607 VAL CG1 C N N 608 VAL CG2 C N N 609 VAL OXT O N N 610 VAL H H N N 611 VAL H2 H N N 612 VAL HA H N N 613 VAL HB H N N 614 VAL HG11 H N N 615 VAL HG12 H N N 616 VAL HG13 H N N 617 VAL HG21 H N N 618 VAL HG22 H N N 619 VAL HG23 H N N 620 VAL HXT H N N 621 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 ASP N CA sing N N 93 ASP N H sing N N 94 ASP N H2 sing N N 95 ASP CA C sing N N 96 ASP CA CB sing N N 97 ASP CA HA sing N N 98 ASP C O doub N N 99 ASP C OXT sing N N 100 ASP CB CG sing N N 101 ASP CB HB2 sing N N 102 ASP CB HB3 sing N N 103 ASP CG OD1 doub N N 104 ASP CG OD2 sing N N 105 ASP OD2 HD2 sing N N 106 ASP OXT HXT sing N N 107 CYS N CA sing N N 108 CYS N H sing N N 109 CYS N H2 sing N N 110 CYS CA C sing N N 111 CYS CA CB sing N N 112 CYS CA HA sing N N 113 CYS C O doub N N 114 CYS C OXT sing N N 115 CYS CB SG sing N N 116 CYS CB HB2 sing N N 117 CYS CB HB3 sing N N 118 CYS SG HG sing N N 119 CYS OXT HXT sing N N 120 DA OP3 P sing N N 121 DA OP3 HOP3 sing N N 122 DA P OP1 doub N N 123 DA P OP2 sing N N 124 DA P "O5'" sing N N 125 DA OP2 HOP2 sing N N 126 DA "O5'" "C5'" sing N N 127 DA "C5'" "C4'" sing N N 128 DA "C5'" "H5'" sing N N 129 DA "C5'" "H5''" sing N N 130 DA "C4'" "O4'" sing N N 131 DA "C4'" "C3'" sing N N 132 DA "C4'" "H4'" sing N N 133 DA "O4'" "C1'" sing N N 134 DA "C3'" "O3'" sing N N 135 DA "C3'" "C2'" sing N N 136 DA "C3'" "H3'" sing N N 137 DA "O3'" "HO3'" sing N N 138 DA "C2'" "C1'" sing N N 139 DA "C2'" "H2'" sing N N 140 DA "C2'" "H2''" sing N N 141 DA "C1'" N9 sing N N 142 DA "C1'" "H1'" sing N N 143 DA N9 C8 sing Y N 144 DA N9 C4 sing Y N 145 DA C8 N7 doub Y N 146 DA C8 H8 sing N N 147 DA N7 C5 sing Y N 148 DA C5 C6 sing Y N 149 DA C5 C4 doub Y N 150 DA C6 N6 sing N N 151 DA C6 N1 doub Y N 152 DA N6 H61 sing N N 153 DA N6 H62 sing N N 154 DA N1 C2 sing Y N 155 DA C2 N3 doub Y N 156 DA C2 H2 sing N N 157 DA N3 C4 sing Y N 158 DC OP3 P sing N N 159 DC OP3 HOP3 sing N N 160 DC P OP1 doub N N 161 DC P OP2 sing N N 162 DC P "O5'" sing N N 163 DC OP2 HOP2 sing N N 164 DC "O5'" "C5'" sing N N 165 DC "C5'" "C4'" sing N N 166 DC "C5'" "H5'" sing N N 167 DC "C5'" "H5''" sing N N 168 DC "C4'" "O4'" sing N N 169 DC "C4'" "C3'" sing N N 170 DC "C4'" "H4'" sing N N 171 DC "O4'" "C1'" sing N N 172 DC "C3'" "O3'" sing N N 173 DC "C3'" "C2'" sing N N 174 DC "C3'" "H3'" sing N N 175 DC "O3'" "HO3'" sing N N 176 DC "C2'" "C1'" sing N N 177 DC "C2'" "H2'" sing N N 178 DC "C2'" "H2''" sing N N 179 DC "C1'" N1 sing N N 180 DC "C1'" "H1'" sing N N 181 DC N1 C2 sing N N 182 DC N1 C6 sing N N 183 DC C2 O2 doub N N 184 DC C2 N3 sing N N 185 DC N3 C4 doub N N 186 DC C4 N4 sing N N 187 DC C4 C5 sing N N 188 DC N4 H41 sing N N 189 DC N4 H42 sing N N 190 DC C5 C6 doub N N 191 DC C5 H5 sing N N 192 DC C6 H6 sing N N 193 DG OP3 P sing N N 194 DG OP3 HOP3 sing N N 195 DG P OP1 doub N N 196 DG P OP2 sing N N 197 DG P "O5'" sing N N 198 DG OP2 HOP2 sing N N 199 DG "O5'" "C5'" sing N N 200 DG "C5'" "C4'" sing N N 201 DG "C5'" "H5'" sing N N 202 DG "C5'" "H5''" sing N N 203 DG "C4'" "O4'" sing N N 204 DG "C4'" "C3'" sing N N 205 DG "C4'" "H4'" sing N N 206 DG "O4'" "C1'" sing N N 207 DG "C3'" "O3'" sing N N 208 DG "C3'" "C2'" sing N N 209 DG "C3'" "H3'" sing N N 210 DG "O3'" "HO3'" sing N N 211 DG "C2'" "C1'" sing N N 212 DG "C2'" "H2'" sing N N 213 DG "C2'" "H2''" sing N N 214 DG "C1'" N9 sing N N 215 DG "C1'" "H1'" sing N N 216 DG N9 C8 sing Y N 217 DG N9 C4 sing Y N 218 DG C8 N7 doub Y N 219 DG C8 H8 sing N N 220 DG N7 C5 sing Y N 221 DG C5 C6 sing N N 222 DG C5 C4 doub Y N 223 DG C6 O6 doub N N 224 DG C6 N1 sing N N 225 DG N1 C2 sing N N 226 DG N1 H1 sing N N 227 DG C2 N2 sing N N 228 DG C2 N3 doub N N 229 DG N2 H21 sing N N 230 DG N2 H22 sing N N 231 DG N3 C4 sing N N 232 DT OP3 P sing N N 233 DT OP3 HOP3 sing N N 234 DT P OP1 doub N N 235 DT P OP2 sing N N 236 DT P "O5'" sing N N 237 DT OP2 HOP2 sing N N 238 DT "O5'" "C5'" sing N N 239 DT "C5'" "C4'" sing N N 240 DT "C5'" "H5'" sing N N 241 DT "C5'" "H5''" sing N N 242 DT "C4'" "O4'" sing N N 243 DT "C4'" "C3'" sing N N 244 DT "C4'" "H4'" sing N N 245 DT "O4'" "C1'" sing N N 246 DT "C3'" "O3'" sing N N 247 DT "C3'" "C2'" sing N N 248 DT "C3'" "H3'" sing N N 249 DT "O3'" "HO3'" sing N N 250 DT "C2'" "C1'" sing N N 251 DT "C2'" "H2'" sing N N 252 DT "C2'" "H2''" sing N N 253 DT "C1'" N1 sing N N 254 DT "C1'" "H1'" sing N N 255 DT N1 C2 sing N N 256 DT N1 C6 sing N N 257 DT C2 O2 doub N N 258 DT C2 N3 sing N N 259 DT N3 C4 sing N N 260 DT N3 H3 sing N N 261 DT C4 O4 doub N N 262 DT C4 C5 sing N N 263 DT C5 C7 sing N N 264 DT C5 C6 doub N N 265 DT C7 H71 sing N N 266 DT C7 H72 sing N N 267 DT C7 H73 sing N N 268 DT C6 H6 sing N N 269 GLN N CA sing N N 270 GLN N H sing N N 271 GLN N H2 sing N N 272 GLN CA C sing N N 273 GLN CA CB sing N N 274 GLN CA HA sing N N 275 GLN C O doub N N 276 GLN C OXT sing N N 277 GLN CB CG sing N N 278 GLN CB HB2 sing N N 279 GLN CB HB3 sing N N 280 GLN CG CD sing N N 281 GLN CG HG2 sing N N 282 GLN CG HG3 sing N N 283 GLN CD OE1 doub N N 284 GLN CD NE2 sing N N 285 GLN NE2 HE21 sing N N 286 GLN NE2 HE22 sing N N 287 GLN OXT HXT sing N N 288 GLU N CA sing N N 289 GLU N H sing N N 290 GLU N H2 sing N N 291 GLU CA C sing N N 292 GLU CA CB sing N N 293 GLU CA HA sing N N 294 GLU C O doub N N 295 GLU C OXT sing N N 296 GLU CB CG sing N N 297 GLU CB HB2 sing N N 298 GLU CB HB3 sing N N 299 GLU CG CD sing N N 300 GLU CG HG2 sing N N 301 GLU CG HG3 sing N N 302 GLU CD OE1 doub N N 303 GLU CD OE2 sing N N 304 GLU OE2 HE2 sing N N 305 GLU OXT HXT sing N N 306 GLY N CA sing N N 307 GLY N H sing N N 308 GLY N H2 sing N N 309 GLY CA C sing N N 310 GLY CA HA2 sing N N 311 GLY CA HA3 sing N N 312 GLY C O doub N N 313 GLY C OXT sing N N 314 GLY OXT HXT sing N N 315 HIS N CA sing N N 316 HIS N H sing N N 317 HIS N H2 sing N N 318 HIS CA C sing N N 319 HIS CA CB sing N N 320 HIS CA HA sing N N 321 HIS C O doub N N 322 HIS C OXT sing N N 323 HIS CB CG sing N N 324 HIS CB HB2 sing N N 325 HIS CB HB3 sing N N 326 HIS CG ND1 sing Y N 327 HIS CG CD2 doub Y N 328 HIS ND1 CE1 doub Y N 329 HIS ND1 HD1 sing N N 330 HIS CD2 NE2 sing Y N 331 HIS CD2 HD2 sing N N 332 HIS CE1 NE2 sing Y N 333 HIS CE1 HE1 sing N N 334 HIS NE2 HE2 sing N N 335 HIS OXT HXT sing N N 336 HOH O H1 sing N N 337 HOH O H2 sing N N 338 ILE N CA sing N N 339 ILE N H sing N N 340 ILE N H2 sing N N 341 ILE CA C sing N N 342 ILE CA CB sing N N 343 ILE CA HA sing N N 344 ILE C O doub N N 345 ILE C OXT sing N N 346 ILE CB CG1 sing N N 347 ILE CB CG2 sing N N 348 ILE CB HB sing N N 349 ILE CG1 CD1 sing N N 350 ILE CG1 HG12 sing N N 351 ILE CG1 HG13 sing N N 352 ILE CG2 HG21 sing N N 353 ILE CG2 HG22 sing N N 354 ILE CG2 HG23 sing N N 355 ILE CD1 HD11 sing N N 356 ILE CD1 HD12 sing N N 357 ILE CD1 HD13 sing N N 358 ILE OXT HXT sing N N 359 LEU N CA sing N N 360 LEU N H sing N N 361 LEU N H2 sing N N 362 LEU CA C sing N N 363 LEU CA CB sing N N 364 LEU CA HA sing N N 365 LEU C O doub N N 366 LEU C OXT sing N N 367 LEU CB CG sing N N 368 LEU CB HB2 sing N N 369 LEU CB HB3 sing N N 370 LEU CG CD1 sing N N 371 LEU CG CD2 sing N N 372 LEU CG HG sing N N 373 LEU CD1 HD11 sing N N 374 LEU CD1 HD12 sing N N 375 LEU CD1 HD13 sing N N 376 LEU CD2 HD21 sing N N 377 LEU CD2 HD22 sing N N 378 LEU CD2 HD23 sing N N 379 LEU OXT HXT sing N N 380 LYS N CA sing N N 381 LYS N H sing N N 382 LYS N H2 sing N N 383 LYS CA C sing N N 384 LYS CA CB sing N N 385 LYS CA HA sing N N 386 LYS C O doub N N 387 LYS C OXT sing N N 388 LYS CB CG sing N N 389 LYS CB HB2 sing N N 390 LYS CB HB3 sing N N 391 LYS CG CD sing N N 392 LYS CG HG2 sing N N 393 LYS CG HG3 sing N N 394 LYS CD CE sing N N 395 LYS CD HD2 sing N N 396 LYS CD HD3 sing N N 397 LYS CE NZ sing N N 398 LYS CE HE2 sing N N 399 LYS CE HE3 sing N N 400 LYS NZ HZ1 sing N N 401 LYS NZ HZ2 sing N N 402 LYS NZ HZ3 sing N N 403 LYS OXT HXT sing N N 404 MET N CA sing N N 405 MET N H sing N N 406 MET N H2 sing N N 407 MET CA C sing N N 408 MET CA CB sing N N 409 MET CA HA sing N N 410 MET C O doub N N 411 MET C OXT sing N N 412 MET CB CG sing N N 413 MET CB HB2 sing N N 414 MET CB HB3 sing N N 415 MET CG SD sing N N 416 MET CG HG2 sing N N 417 MET CG HG3 sing N N 418 MET SD CE sing N N 419 MET CE HE1 sing N N 420 MET CE HE2 sing N N 421 MET CE HE3 sing N N 422 MET OXT HXT sing N N 423 PHE N CA sing N N 424 PHE N H sing N N 425 PHE N H2 sing N N 426 PHE CA C sing N N 427 PHE CA CB sing N N 428 PHE CA HA sing N N 429 PHE C O doub N N 430 PHE C OXT sing N N 431 PHE CB CG sing N N 432 PHE CB HB2 sing N N 433 PHE CB HB3 sing N N 434 PHE CG CD1 doub Y N 435 PHE CG CD2 sing Y N 436 PHE CD1 CE1 sing Y N 437 PHE CD1 HD1 sing N N 438 PHE CD2 CE2 doub Y N 439 PHE CD2 HD2 sing N N 440 PHE CE1 CZ doub Y N 441 PHE CE1 HE1 sing N N 442 PHE CE2 CZ sing Y N 443 PHE CE2 HE2 sing N N 444 PHE CZ HZ sing N N 445 PHE OXT HXT sing N N 446 PRO N CA sing N N 447 PRO N CD sing N N 448 PRO N H sing N N 449 PRO CA C sing N N 450 PRO CA CB sing N N 451 PRO CA HA sing N N 452 PRO C O doub N N 453 PRO C OXT sing N N 454 PRO CB CG sing N N 455 PRO CB HB2 sing N N 456 PRO CB HB3 sing N N 457 PRO CG CD sing N N 458 PRO CG HG2 sing N N 459 PRO CG HG3 sing N N 460 PRO CD HD2 sing N N 461 PRO CD HD3 sing N N 462 PRO OXT HXT sing N N 463 SAH N CA sing N N 464 SAH N HN1 sing N N 465 SAH N HN2 sing N N 466 SAH CA CB sing N N 467 SAH CA C sing N N 468 SAH CA HA sing N N 469 SAH CB CG sing N N 470 SAH CB HB1 sing N N 471 SAH CB HB2 sing N N 472 SAH CG SD sing N N 473 SAH CG HG1 sing N N 474 SAH CG HG2 sing N N 475 SAH SD "C5'" sing N N 476 SAH C O doub N N 477 SAH C OXT sing N N 478 SAH OXT HXT sing N N 479 SAH "C5'" "C4'" sing N N 480 SAH "C5'" "H5'1" sing N N 481 SAH "C5'" "H5'2" sing N N 482 SAH "C4'" "O4'" sing N N 483 SAH "C4'" "C3'" sing N N 484 SAH "C4'" "H4'" sing N N 485 SAH "O4'" "C1'" sing N N 486 SAH "C3'" "O3'" sing N N 487 SAH "C3'" "C2'" sing N N 488 SAH "C3'" "H3'" sing N N 489 SAH "O3'" "HO3'" sing N N 490 SAH "C2'" "O2'" sing N N 491 SAH "C2'" "C1'" sing N N 492 SAH "C2'" "H2'" sing N N 493 SAH "O2'" "HO2'" sing N N 494 SAH "C1'" N9 sing N N 495 SAH "C1'" "H1'" sing N N 496 SAH N9 C8 sing Y N 497 SAH N9 C4 sing Y N 498 SAH C8 N7 doub Y N 499 SAH C8 H8 sing N N 500 SAH N7 C5 sing Y N 501 SAH C5 C6 sing Y N 502 SAH C5 C4 doub Y N 503 SAH C6 N6 sing N N 504 SAH C6 N1 doub Y N 505 SAH N6 HN61 sing N N 506 SAH N6 HN62 sing N N 507 SAH N1 C2 sing Y N 508 SAH C2 N3 doub Y N 509 SAH C2 H2 sing N N 510 SAH N3 C4 sing Y N 511 SER N CA sing N N 512 SER N H sing N N 513 SER N H2 sing N N 514 SER CA C sing N N 515 SER CA CB sing N N 516 SER CA HA sing N N 517 SER C O doub N N 518 SER C OXT sing N N 519 SER CB OG sing N N 520 SER CB HB2 sing N N 521 SER CB HB3 sing N N 522 SER OG HG sing N N 523 SER OXT HXT sing N N 524 SO4 S O1 doub N N 525 SO4 S O2 doub N N 526 SO4 S O3 sing N N 527 SO4 S O4 sing N N 528 THR N CA sing N N 529 THR N H sing N N 530 THR N H2 sing N N 531 THR CA C sing N N 532 THR CA CB sing N N 533 THR CA HA sing N N 534 THR C O doub N N 535 THR C OXT sing N N 536 THR CB OG1 sing N N 537 THR CB CG2 sing N N 538 THR CB HB sing N N 539 THR OG1 HG1 sing N N 540 THR CG2 HG21 sing N N 541 THR CG2 HG22 sing N N 542 THR CG2 HG23 sing N N 543 THR OXT HXT sing N N 544 TRP N CA sing N N 545 TRP N H sing N N 546 TRP N H2 sing N N 547 TRP CA C sing N N 548 TRP CA CB sing N N 549 TRP CA HA sing N N 550 TRP C O doub N N 551 TRP C OXT sing N N 552 TRP CB CG sing N N 553 TRP CB HB2 sing N N 554 TRP CB HB3 sing N N 555 TRP CG CD1 doub Y N 556 TRP CG CD2 sing Y N 557 TRP CD1 NE1 sing Y N 558 TRP CD1 HD1 sing N N 559 TRP CD2 CE2 doub Y N 560 TRP CD2 CE3 sing Y N 561 TRP NE1 CE2 sing Y N 562 TRP NE1 HE1 sing N N 563 TRP CE2 CZ2 sing Y N 564 TRP CE3 CZ3 doub Y N 565 TRP CE3 HE3 sing N N 566 TRP CZ2 CH2 doub Y N 567 TRP CZ2 HZ2 sing N N 568 TRP CZ3 CH2 sing Y N 569 TRP CZ3 HZ3 sing N N 570 TRP CH2 HH2 sing N N 571 TRP OXT HXT sing N N 572 TYR N CA sing N N 573 TYR N H sing N N 574 TYR N H2 sing N N 575 TYR CA C sing N N 576 TYR CA CB sing N N 577 TYR CA HA sing N N 578 TYR C O doub N N 579 TYR C OXT sing N N 580 TYR CB CG sing N N 581 TYR CB HB2 sing N N 582 TYR CB HB3 sing N N 583 TYR CG CD1 doub Y N 584 TYR CG CD2 sing Y N 585 TYR CD1 CE1 sing Y N 586 TYR CD1 HD1 sing N N 587 TYR CD2 CE2 doub Y N 588 TYR CD2 HD2 sing N N 589 TYR CE1 CZ doub Y N 590 TYR CE1 HE1 sing N N 591 TYR CE2 CZ sing Y N 592 TYR CE2 HE2 sing N N 593 TYR CZ OH sing N N 594 TYR OH HH sing N N 595 TYR OXT HXT sing N N 596 VAL N CA sing N N 597 VAL N H sing N N 598 VAL N H2 sing N N 599 VAL CA C sing N N 600 VAL CA CB sing N N 601 VAL CA HA sing N N 602 VAL C O doub N N 603 VAL C OXT sing N N 604 VAL CB CG1 sing N N 605 VAL CB CG2 sing N N 606 VAL CB HB sing N N 607 VAL CG1 HG11 sing N N 608 VAL CG1 HG12 sing N N 609 VAL CG1 HG13 sing N N 610 VAL CG2 HG21 sing N N 611 VAL CG2 HG22 sing N N 612 VAL CG2 HG23 sing N N 613 VAL OXT HXT sing N N 614 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2UYH 'double helix' 2UYH 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 12 1_555 -0.065 -0.173 -0.282 -3.489 13.232 -9.546 1 C_DG402:DC433_D C 402 ? D 433 ? 19 1 1 B DG 3 1_555 C DC 11 1_555 -0.180 -0.407 -0.768 -2.185 -4.993 -2.307 2 C_DG403:DC432_D C 403 ? D 432 ? 19 1 1 B DA 4 1_555 C DT 10 1_555 0.319 0.025 -0.211 -3.925 -8.555 -0.343 3 C_DA404:DT431_D C 404 ? D 431 ? 20 1 1 B DT 5 1_555 C DA 9 1_555 0.963 -0.025 -0.254 12.110 -3.632 4.615 4 C_DT405:DA430_D C 405 ? D 430 ? 20 1 1 B DG 6 1_555 C DC 8 1_555 -0.026 -0.190 0.123 9.302 1.105 -8.311 5 C_DG406:DC429_D C 406 ? D 429 ? 19 1 1 B 5CM 7 1_555 C DG 7 1_555 -0.157 -0.209 -0.033 4.451 -4.885 -5.191 6 C_5CM407:DG428_D C 407 ? D 428 ? 19 1 1 B DC 9 1_555 C DG 5 1_555 0.313 -0.169 0.291 -5.870 -0.132 -0.749 7 C_DC409:DG426_D C 409 ? D 426 ? 19 1 1 B DT 10 1_555 C DA 4 1_555 0.139 0.153 0.035 3.003 -9.990 -2.086 8 C_DT410:DA425_D C 410 ? D 425 ? 20 1 1 B DG 11 1_555 C DC 3 1_555 -0.761 -0.297 -0.315 -1.309 -3.068 2.916 9 C_DG411:DC424_D C 411 ? D 424 ? 19 1 1 B DA 12 1_555 C DT 2 1_555 -0.200 -0.363 -0.164 7.757 -3.826 -3.633 10 C_DA412:DT423_D C 412 ? D 423 ? 20 1 1 B DC 13 1_555 C DG 1 1_555 0.413 -5.232 0.282 10.016 5.817 77.461 11 C_DC413:DG422_D C 413 ? D 422 ? ? 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 12 1_555 B DG 3 1_555 C DC 11 1_555 -0.102 -0.661 3.640 4.616 7.364 32.399 -2.467 1.005 3.367 12.910 -8.092 33.514 1 CC_DG402DG403:DC432DC433_DD C 402 ? D 433 ? C 403 ? D 432 ? 1 B DG 3 1_555 C DC 11 1_555 B DA 4 1_555 C DT 10 1_555 0.119 -0.425 3.302 -0.213 2.659 35.880 -1.069 -0.224 3.262 4.310 0.345 35.976 2 CC_DG403DA404:DT431DC432_DD C 403 ? D 432 ? C 404 ? D 431 ? 1 B DA 4 1_555 C DT 10 1_555 B DT 5 1_555 C DA 9 1_555 0.360 -0.255 2.951 1.283 6.216 27.944 -1.776 -0.468 2.843 12.666 -2.615 28.642 3 CC_DA404DT405:DA430DT431_DD C 404 ? D 431 ? C 405 ? D 430 ? 1 B DT 5 1_555 C DA 9 1_555 B DG 6 1_555 C DC 8 1_555 -1.251 0.277 3.312 -7.096 2.634 38.447 0.082 0.974 3.490 3.954 10.650 39.158 4 CC_DT405DG406:DC429DA430_DD C 405 ? D 430 ? C 406 ? D 429 ? 1 B DG 6 1_555 C DC 8 1_555 B 5CM 7 1_555 C DG 7 1_555 0.574 -1.154 3.778 2.070 -5.225 32.656 -0.978 -0.593 3.938 -9.207 -3.647 33.123 5 CC_DG4065CM407:DG428DC429_DD C 406 ? D 429 ? C 407 ? D 428 ? 1 B DC 9 1_555 C DG 5 1_555 B DT 10 1_555 C DA 4 1_555 -0.363 0.300 3.148 -0.238 -1.990 38.834 0.683 0.517 3.132 -2.990 0.358 38.884 6 CC_DC409DT410:DA425DG426_DD C 409 ? D 426 ? C 410 ? D 425 ? 1 B DT 10 1_555 C DA 4 1_555 B DG 11 1_555 C DC 3 1_555 0.429 0.342 3.521 4.304 2.782 32.383 0.085 0.047 3.563 4.950 -7.657 32.775 7 CC_DT410DG411:DC424DA425_DD C 410 ? D 425 ? C 411 ? D 424 ? 1 B DG 11 1_555 C DC 3 1_555 B DA 12 1_555 C DT 2 1_555 -0.475 0.173 3.054 -4.157 14.328 29.006 -2.093 0.150 2.863 26.509 7.691 32.544 8 CC_DG411DA412:DT423DC424_DD C 411 ? D 424 ? C 412 ? D 423 ? 1 B DA 12 1_555 C DT 2 1_555 B DC 13 1_555 C DG 1 1_555 1.775 -3.681 0.470 -176.801 4.449 93.704 -1.838 -0.796 -0.933 2.235 88.825 177.850 9 CC_DA412DC413:DG422DT423_DD C 412 ? D 423 ? C 413 ? D 422 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 S-ADENOSYL-L-HOMOCYSTEINE SAH 5 'SULFATE ION' SO4 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3MHT _pdbx_initial_refinement_model.details 'PDB ENTRY 3MHT' #