HEADER HYDROLASE 21-JUN-07 2V3R TITLE HYPOCREA JECORINA CEL7A IN COMPLEX WITH (S)-DIHYDROXY-PHENANTHRENOLOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXOGLUCANASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC MODULE, RESIDUES 18-451; COMPND 5 SYNONYM: CELLOBIOHYDROLASE CEL7A, EXOGLUCANASE I, COMPND 6 EXOCELLOBIOHYDROLASE I, CBHI, 1,4-BETA-CELLOBIOHYDROLASE; COMPND 7 EC: 3.2.1.91 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HYPOCREA JECORINA; SOURCE 3 ORGANISM_TAXID: 51453; SOURCE 4 STRAIN: QM9414; SOURCE 5 OTHER_DETAILS: SYNONYM FOR STRAIN IS TRICHODERMA REESEI, WHICH IS A SOURCE 6 CLONAL DERIVATIVE OF H. JECORINA KEYWDS HYDROLASE, GLYCOSIDASE, GLYCOPROTEIN, CARBOHYDRATE METABOLISM, KEYWDS 2 POLYSACCHARIDE DEGRADATION, PYRROLIDONE CARBOXYLIC ACID, KEYWDS 3 HYDROLASE(O-GLYCOSYL), CELLULOSE DEAGRADATION, CHIRAL SEPARATION, KEYWDS 4 CELLULOSE DEGRADATION EXPDTA X-RAY DIFFRACTION AUTHOR A.FAGERSTROM,M.SANDGREN,U.BERG,J.STAHLBERG REVDAT 8 13-DEC-23 2V3R 1 HETSYN REVDAT 7 29-JUL-20 2V3R 1 COMPND REMARK HETNAM LINK REVDAT 7 2 1 SITE REVDAT 6 11-MAR-20 2V3R 1 SEQRES LINK REVDAT 5 06-FEB-19 2V3R 1 REMARK REVDAT 4 30-JAN-19 2V3R 1 REMARK REVDAT 3 17-JAN-18 2V3R 1 REMARK REVDAT 2 24-FEB-09 2V3R 1 VERSN REVDAT 1 01-JUL-08 2V3R 0 JRNL AUTH A.FAGERSTROM,T.LILJEFORS,J.STAHLBERG,M.SANDGREN,U.BERG, JRNL AUTH 2 R.ISAKSSON JRNL TITL A STUDY OF THE CHIRAL RECOGNITION MECHANISMS OF JRNL TITL 2 CELLOBIOHYDROLASE CEL7A FOR LIGANDS BASED ON THE JRNL TITL 3 BETA-BLOCKER MOTIF: CRYSTAL STRUCTURES, MICROCALORIMETRY AND JRNL TITL 4 COMPUTATIONAL MODELLING OF CEL7A-INHIBITOR COMPLEXES. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 47899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.134 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2566 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3476 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1510 REMARK 3 BIN FREE R VALUE SET COUNT : 205 REMARK 3 BIN FREE R VALUE : 0.2150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 688 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.080 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.086 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.052 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.444 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3569 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2279 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4909 ; 1.413 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5564 ; 0.912 ; 3.007 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 478 ; 6.496 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 155 ;34.477 ;25.871 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 498 ;11.256 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;18.223 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 520 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4221 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 709 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 737 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2559 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1833 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1840 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 503 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.258 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 30 ; 0.146 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 56 ; 0.199 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2903 ; 2.111 ; 5.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3693 ; 2.454 ; 6.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1573 ; 2.902 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1216 ; 3.791 ; 7.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ALTERNATE CONFORMATIONS WERE MODELLED FOR RESIDUES A REMARK 3 7, 13, 47, 55, 98, 111, 114, 119, 159, 194, 195, 15, 246, 247, REMARK 3 249, 253, 254, 328, 342, 357, 371, 388, 407. REMARK 4 REMARK 4 2V3R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1290032985. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I711 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.082 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50461 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 27.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1DY4 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POLYETHYLENE GLYCOL MONOMETHYL ETHER, REMARK 280 GLYCEROL, COBALT CHLORIDE, SODIUM ACETATE PH 5.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298 K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.44500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.42900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.27500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.44500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.42900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.27500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.44500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.42900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.27500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.44500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.42900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 55.27500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 BIOLOGICAL CONVERSION OF CELLULOSE TO GLUCOSE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLY A 244 O HOH A 2407 0.62 REMARK 500 CG2 THR A 332 O HOH A 2541 0.66 REMARK 500 CD LYS A 346 O HOH A 2566 0.67 REMARK 500 O HOH A 2460 O HOH A 2461 0.67 REMARK 500 N ASN A 49 O HOH A 2114 0.72 REMARK 500 CB TYR A 304 O HOH A 2492 0.73 REMARK 500 O PRO A 265 O HOH A 2440 0.74 REMARK 500 N2 NAG A 435 O HOH A 2683 0.76 REMARK 500 C THR A 48 O HOH A 2114 0.77 REMARK 500 CA LEU A 268 O HOH A 2447 0.82 REMARK 500 CB LEU A 268 O HOH A 2447 0.82 REMARK 500 CB ALA A 336 O HOH A 2552 0.86 REMARK 500 C TRP A 263 O HOH A 2436 0.86 REMARK 500 C ARG A 251 O HOH A 2424 0.87 REMARK 500 CA PRO A 265 O HOH A 2439 0.88 REMARK 500 CD GLU A 317 O HOH A 2514 0.89 REMARK 500 O HOH A 2533 O HOH A 2536 0.93 REMARK 500 CA GLY A 244 O HOH A 2407 0.93 REMARK 500 CA ALA A 336 O HOH A 2551 0.95 REMARK 500 O HOH A 2501 O HOH A 2502 0.95 REMARK 500 CG ASN A 301 O HOH A 2489 0.96 REMARK 500 O ASP A 249 O HOH A 2414 0.96 REMARK 500 N GLY A 347 O HOH A 2569 0.98 REMARK 500 CB GLU A 334 O HOH A 2546 0.98 REMARK 500 N TYR A 252 O HOH A 2424 0.99 REMARK 500 CE LYS A 346 O HOH A 2566 1.00 REMARK 500 CA SER A 278 O HOH A 2456 1.02 REMARK 500 OD1 ASN A 301 O HOH A 2489 1.03 REMARK 500 N PRO A 265 O HOH A 2439 1.08 REMARK 500 CD1 TYR A 252 O HOH A 2421 1.10 REMARK 500 CG GLU A 334 O HOH A 2546 1.10 REMARK 500 O ASP A 328 O HOH A 2525 1.13 REMARK 500 CB SER A 278 O HOH A 2456 1.13 REMARK 500 OD2 ASP A 249 O HOH A 2418 1.14 REMARK 500 CA TYR A 304 O HOH A 2492 1.15 REMARK 500 N ASN A 264 O HOH A 2436 1.20 REMARK 500 O HOH A 2404 O HOH A 2426 1.20 REMARK 500 O HOH A 2508 O HOH A 2510 1.21 REMARK 500 CO CO A 471 O HOH A 2687 1.24 REMARK 500 O HOH A 2493 O HOH A 2494 1.25 REMARK 500 OE2 GLU A 317 O HOH A 2514 1.25 REMARK 500 N LEU A 282 O HOH A 2463 1.26 REMARK 500 O GLY A 240 O HOH A 2401 1.27 REMARK 500 O ASN A 264 O HOH A 2435 1.28 REMARK 500 O THR A 281 O HOH A 2462 1.29 REMARK 500 O ASN A 315 O HOH A 2509 1.30 REMARK 500 O ASP A 249 O HOH A 2414 1.31 REMARK 500 O ASP A 328 O HOH A 2525 1.33 REMARK 500 N ALA A 336 O HOH A 2551 1.34 REMARK 500 C7 NAG A 435 O HOH A 2683 1.35 REMARK 500 REMARK 500 THIS ENTRY HAS 187 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2483 O HOH A 2517 3657 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 99 -135.13 -126.81 REMARK 500 SER A 99 -135.13 -127.63 REMARK 500 ALA A 372 18.87 -141.90 REMARK 500 SER A 379 -158.48 -138.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2007 DISTANCE = 6.19 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 471 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 206 NE2 REMARK 620 2 GLU A 239 OE2 96.3 REMARK 620 3 HOH A2685 O 89.9 173.0 REMARK 620 4 HOH A2686 O 88.2 99.7 83.7 REMARK 620 5 HOH A2688 O 92.0 78.5 98.1 178.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 470 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 295 OE1 REMARK 620 2 GLU A 295 OE2 167.8 REMARK 620 3 GLU A 295 OE1 113.1 55.2 REMARK 620 4 GLU A 295 OE2 64.9 127.1 175.7 REMARK 620 5 GLU A 325 OE2 89.6 91.9 82.8 93.3 REMARK 620 6 GLU A 325 OE2 91.0 84.1 81.4 102.2 163.0 REMARK 620 N 1 2 3 4 5 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AZ6 RELATED DB: PDB REMARK 900 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING REMARK 900 DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 23 REMARK 900 STRUCTURES REMARK 900 RELATED ID: 1AZH RELATED DB: PDB REMARK 900 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING REMARK 900 DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 14 REMARK 900 STRUCTURES REMARK 900 RELATED ID: 1AZJ RELATED DB: PDB REMARK 900 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING REMARK 900 DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 18 REMARK 900 STRUCTURES REMARK 900 RELATED ID: 1AZK RELATED DB: PDB REMARK 900 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING REMARK 900 DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 19 REMARK 900 STRUCTURES REMARK 900 RELATED ID: 1CBH RELATED DB: PDB REMARK 900 C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I (CT -CBH I) (NMR, REMARK 900 MINIMIZED MEAN STRUCTURE) REMARK 900 RELATED ID: 1CEL RELATED DB: PDB REMARK 900 1,4-BETA-D-GLUCAN CELLOBIOHYDROLASE I ( CELLULASE) REMARK 900 RELATED ID: 1DY4 RELATED DB: PDB REMARK 900 CBH1 IN COMPLEX WITH S-PROPRANOLOL REMARK 900 RELATED ID: 1EGN RELATED DB: PDB REMARK 900 CELLOBIOHYDROLASE CEL7A (E223S, A224H, L225V, T226A, D262G)MUTANT REMARK 900 RELATED ID: 1Q2B RELATED DB: PDB REMARK 900 CELLOBIOHYDROLASE CEL7A WITH DISULPHIDE BRIDGE ADDED ACROSSEXO-LOOP REMARK 900 BY MUTATIONS D241C AND D249C REMARK 900 RELATED ID: 1Q2E RELATED DB: PDB REMARK 900 CELLOBIOHYDROLASE CEL7A WITH LOOP DELETION 245 -252 ANDBOUND NON- REMARK 900 HYDROLYSABLE CELLOTETRAOSE REMARK 900 RELATED ID: 2CBH RELATED DB: PDB REMARK 900 C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I (CT -CBH I) (NMR,41 REMARK 900 SIMULATED ANNEALING STRUCTURES) REMARK 900 RELATED ID: 2CEL RELATED DB: PDB REMARK 900 ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH NO LIGAND BOUND REMARK 900 IN THE ACTIVE SITE REMARK 900 RELATED ID: 2JF8 RELATED DB: PDB REMARK 900 HYPOCREA JECORINA CEL7A E212Q MUTANT IN COMPLEX WITH P-NITROPHENYL REMARK 900 CELLOBIOSIDE REMARK 900 RELATED ID: 2V3I RELATED DB: PDB REMARK 900 HYPOCREA JECORINA CEL7A IN COMPLEX WITH (R )-DIHYDROXY- REMARK 900 PHENANTHRENOLOL REMARK 900 RELATED ID: 3CEL RELATED DB: PDB REMARK 900 ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH CELLOBIOSE BOUND REMARK 900 IN THE ACTIVE SITE REMARK 900 RELATED ID: 4CEL RELATED DB: PDB REMARK 900 ACTIVE-SITE MUTANT D214N DETERMINED AT PH 6.0 WITH NO LIGAND BOUND REMARK 900 IN THE ACTIVE SITE REMARK 900 RELATED ID: 5CEL RELATED DB: PDB REMARK 900 CBH1 (E212Q) CELLOTETRAOSE COMPLEX REMARK 900 RELATED ID: 6CEL RELATED DB: PDB REMARK 900 CBH1 (E212Q) CELLOPENTAOSE COMPLEX REMARK 900 RELATED ID: 7CEL RELATED DB: PDB REMARK 900 CBH1 (E217Q) IN COMPLEX WITH CELLOHEXAOSE AND CELLOBIOSE REMARK 900 RELATED ID: 8CEL RELATED DB: PDB REMARK 900 THEORETICAL MODEL OF CBH1 IN COMPLEX WITH A CELLULOSE NANOMER REMARK 999 REMARK 999 SEQUENCE REMARK 999 PCA A 1 UNI P62694 GLN 18 MODIFIED RESIDUE DBREF 2V3R A 1 434 UNP P62694 GUX1_TRIRE 18 451 SEQRES 1 A 434 PCA SER ALA CYS THR LEU GLN SER GLU THR HIS PRO PRO SEQRES 2 A 434 LEU THR TRP GLN LYS CYS SER SER GLY GLY THR CYS THR SEQRES 3 A 434 GLN GLN THR GLY SER VAL VAL ILE ASP ALA ASN TRP ARG SEQRES 4 A 434 TRP THR HIS ALA THR ASN SER SER THR ASN CYS TYR ASP SEQRES 5 A 434 GLY ASN THR TRP SER SER THR LEU CYS PRO ASP ASN GLU SEQRES 6 A 434 THR CYS ALA LYS ASN CYS CYS LEU ASP GLY ALA ALA TYR SEQRES 7 A 434 ALA SER THR TYR GLY VAL THR THR SER GLY ASN SER LEU SEQRES 8 A 434 SER ILE GLY PHE VAL THR GLN SER ALA GLN LYS ASN VAL SEQRES 9 A 434 GLY ALA ARG LEU TYR LEU MET ALA SER ASP THR THR TYR SEQRES 10 A 434 GLN GLU PHE THR LEU LEU GLY ASN GLU PHE SER PHE ASP SEQRES 11 A 434 VAL ASP VAL SER GLN LEU PRO CYS GLY LEU ASN GLY ALA SEQRES 12 A 434 LEU TYR PHE VAL SER MET ASP ALA ASP GLY GLY VAL SER SEQRES 13 A 434 LYS TYR PRO THR ASN THR ALA GLY ALA LYS TYR GLY THR SEQRES 14 A 434 GLY TYR CYS ASP SER GLN CYS PRO ARG ASP LEU LYS PHE SEQRES 15 A 434 ILE ASN GLY GLN ALA ASN VAL GLU GLY TRP GLU PRO SER SEQRES 16 A 434 SER ASN ASN ALA ASN THR GLY ILE GLY GLY HIS GLY SER SEQRES 17 A 434 CYS CYS SER GLU MET ASP ILE TRP GLU ALA ASN SER ILE SEQRES 18 A 434 SER GLU ALA LEU THR PRO HIS PRO CYS THR THR VAL GLY SEQRES 19 A 434 GLN GLU ILE CYS GLU GLY ASP GLY CYS GLY GLY THR TYR SEQRES 20 A 434 SER ASP ASN ARG TYR GLY GLY THR CYS ASP PRO ASP GLY SEQRES 21 A 434 CYS ASP TRP ASN PRO TYR ARG LEU GLY ASN THR SER PHE SEQRES 22 A 434 TYR GLY PRO GLY SER SER PHE THR LEU ASP THR THR LYS SEQRES 23 A 434 LYS LEU THR VAL VAL THR GLN PHE GLU THR SER GLY ALA SEQRES 24 A 434 ILE ASN ARG TYR TYR VAL GLN ASN GLY VAL THR PHE GLN SEQRES 25 A 434 GLN PRO ASN ALA GLU LEU GLY SER TYR SER GLY ASN GLU SEQRES 26 A 434 LEU ASN ASP ASP TYR CYS THR ALA GLU GLU ALA GLU PHE SEQRES 27 A 434 GLY GLY SER SER PHE SER ASP LYS GLY GLY LEU THR GLN SEQRES 28 A 434 PHE LYS LYS ALA THR SER GLY GLY MET VAL LEU VAL MET SEQRES 29 A 434 SER LEU TRP ASP ASP TYR TYR ALA ASN MET LEU TRP LEU SEQRES 30 A 434 ASP SER THR TYR PRO THR ASN GLU THR SER SER THR PRO SEQRES 31 A 434 GLY ALA VAL ARG GLY SER CYS SER THR SER SER GLY VAL SEQRES 32 A 434 PRO ALA GLN VAL GLU SER GLN SER PRO ASN ALA LYS VAL SEQRES 33 A 434 THR PHE SER ASN ILE LYS PHE GLY PRO ILE GLY SER THR SEQRES 34 A 434 GLY ASN PRO SER GLY MODRES 2V3R ASN A 270 ASN GLYCOSYLATION SITE MODRES 2V3R ASN A 384 ASN GLYCOSYLATION SITE MODRES 2V3R PCA A 1 GLU PYROGLUTAMIC ACID HET PCA A 1 8 HET NAG A 435 14 HET NAG A 436 14 HET CO A 470 1 HET CO A 471 1 HET XX7 A 501 25 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CO COBALT (II) ION HETNAM XX7 2-{[(2S)-2-HYDROXY-3-(9-PHENANTHRYLOXY) HETNAM 2 XX7 PROPYL]AMINO}PROPANE-1,3-DIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 1 PCA C5 H7 N O3 FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 4 CO 2(CO 2+) FORMUL 6 XX7 C20 H23 N O4 FORMUL 7 HOH *688(H2 O) HELIX 1 1 ALA A 36 ARG A 39 5 4 HELIX 2 2 ASP A 63 ASN A 70 1 8 HELIX 3 3 ALA A 77 GLY A 83 1 7 HELIX 4 4 GLY A 164 GLY A 168 5 5 HELIX 5 5 ASP A 241 GLY A 244 5 4 HELIX 6 6 ASN A 327 GLY A 339 1 13 HELIX 7 7 SER A 341 LYS A 346 1 6 HELIX 8 8 GLY A 347 GLY A 358 1 12 HELIX 9 9 MET A 374 SER A 379 1 6 HELIX 10 10 VAL A 403 SER A 411 1 9 SHEET 1 AA 3 SER A 2 ALA A 3 0 SHEET 2 AA 3 CYS A 71 LEU A 73 1 O CYS A 71 N SER A 2 SHEET 3 AA 3 THR A 41 ALA A 43 -1 O HIS A 42 N CYS A 72 SHEET 1 AB 6 VAL A 84 SER A 87 0 SHEET 2 AB 6 SER A 90 GLY A 94 -1 O SER A 90 N SER A 87 SHEET 3 AB 6 LYS A 415 PRO A 425 -1 O VAL A 416 N ILE A 93 SHEET 4 AB 6 PRO A 13 CYS A 19 1 O GLN A 17 N PHE A 423 SHEET 5 AB 6 CYS A 25 ILE A 34 -1 O THR A 26 N LYS A 18 SHEET 6 AB 6 ALA A 106 SER A 113 -1 O TYR A 109 N VAL A 33 SHEET 1 AC 7 VAL A 84 SER A 87 0 SHEET 2 AC 7 SER A 90 GLY A 94 -1 O SER A 90 N SER A 87 SHEET 3 AC 7 LYS A 415 PRO A 425 -1 O VAL A 416 N ILE A 93 SHEET 4 AC 7 ASN A 125 ASP A 132 -1 O GLU A 126 N GLY A 424 SHEET 5 AC 7 LEU A 288 PHE A 294 -1 O LEU A 288 N VAL A 131 SHEET 6 AC 7 ILE A 300 GLN A 306 -1 O ASN A 301 N GLN A 293 SHEET 7 AC 7 VAL A 309 GLN A 312 -1 O VAL A 309 N GLN A 306 SHEET 1 AD 2 TYR A 51 ASP A 52 0 SHEET 2 AD 2 THR A 55 TRP A 56 -1 O THR A 55 N ASP A 52 SHEET 1 AE 2 VAL A 96 GLN A 98 0 SHEET 2 AE 2 LYS A 102 VAL A 104 -1 O ASN A 103 N THR A 97 SHEET 1 AF 2 PHE A 182 ILE A 183 0 SHEET 2 AF 2 GLN A 186 ALA A 187 -1 O GLN A 186 N ILE A 183 SHEET 1 AG 2 GLU A 193 PRO A 194 0 SHEET 2 AG 2 GLY A 202 ILE A 203 -1 O ILE A 203 N GLU A 193 SHEET 1 AH 2 HIS A 206 CYS A 209 0 SHEET 2 AH 2 GLU A 236 GLU A 239 -1 O GLU A 236 N CYS A 209 SHEET 1 AI 2 TYR A 274 GLY A 275 0 SHEET 2 AI 2 LEU A 282 ASP A 283 1 O LEU A 282 N GLY A 275 SHEET 1 AJ 2 ALA A 316 LEU A 318 0 SHEET 2 AJ 2 TYR A 321 GLY A 323 -1 O TYR A 321 N LEU A 318 SSBOND 1 CYS A 4 CYS A 72 1555 1555 2.03 SSBOND 2 CYS A 19 CYS A 25 1555 1555 2.07 SSBOND 3 CYS A 50 CYS A 71 1555 1555 2.04 SSBOND 4 CYS A 61 CYS A 67 1555 1555 2.03 SSBOND 5 CYS A 138 CYS A 397 1555 1555 2.02 SSBOND 6 CYS A 172 CYS A 210 1555 1555 2.02 SSBOND 7 CYS A 176 CYS A 209 1555 1555 2.05 SSBOND 8 CYS A 230 CYS A 256 1555 1555 2.04 SSBOND 9 CYS A 238 CYS A 243 1555 1555 2.04 SSBOND 10 CYS A 261 CYS A 331 1555 1555 2.02 LINK C PCA A 1 N SER A 2 1555 1555 1.33 LINK ND2 ASN A 270 C1 NAG A 435 1555 1555 1.44 LINK ND2 ASN A 384 C1 NAG A 436 1555 1555 1.45 LINK NE2 HIS A 206 CO CO A 471 1555 1555 2.09 LINK OE2 GLU A 239 CO CO A 471 1555 1555 1.93 LINK OE1 GLU A 295 CO CO A 470 3657 1555 2.04 LINK OE2 GLU A 295 CO CO A 470 1555 1555 2.35 LINK OE1 GLU A 295 CO CO A 470 1555 1555 2.35 LINK OE2 GLU A 295 CO CO A 470 3657 1555 2.02 LINK OE2 GLU A 325 CO CO A 470 3657 1555 2.04 LINK OE2 GLU A 325 CO CO A 470 1555 1555 2.04 LINK CO CO A 471 O HOH A2685 1555 1555 2.13 LINK CO CO A 471 O HOH A2686 1555 1555 2.21 LINK CO CO A 471 O HOH A2688 1555 1555 1.75 CISPEP 1 TYR A 381 PRO A 382 0 -11.70 CRYST1 82.890 82.858 110.550 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012064 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012069 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009046 0.00000 HETATM 1 N PCA A 1 38.593 56.921 67.037 1.00 13.98 N HETATM 2 CA PCA A 1 38.205 58.100 66.311 1.00 12.61 C HETATM 3 CB PCA A 1 37.092 58.782 67.100 1.00 14.44 C HETATM 4 CG PCA A 1 37.339 58.388 68.533 1.00 13.28 C HETATM 5 CD PCA A 1 38.149 57.139 68.390 1.00 12.72 C HETATM 6 OE PCA A 1 38.416 56.349 69.291 1.00 14.03 O HETATM 7 C PCA A 1 39.377 59.046 66.163 1.00 12.36 C HETATM 8 O PCA A 1 40.262 59.051 67.011 1.00 14.40 O