HEADER TRANSFERASE 01-OCT-08 2V54 TITLE CRYSTAL STRUCTURE OF VACCINIA VIRUS THYMIDYLATE KINASE BOUND TO TDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: THYMIDYLATE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DTMP KINASE; COMPND 5 EC: 2.7.4.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VACCINIA VIRUS COPENHAGEN; SOURCE 3 ORGANISM_TAXID: 10249; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) ROSETTA PLYSS; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS NUCLEOTIDE BIOSYNTHESIS, ATP-BINDING, NUCLEOTIDE-BINDING, KINASE, KEYWDS 2 POXVIRUS, TMP KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.CAILLAT,D.TOPALIS,L.A.AGROFOGLIO,S.POCHET,J.BALZARINI,D.DEVILLE- AUTHOR 2 BONNE,P.MEYER REVDAT 5 13-DEC-23 2V54 1 REMARK LINK REVDAT 4 16-JUN-09 2V54 1 REMARK REVDAT 3 24-FEB-09 2V54 1 VERSN REVDAT 2 18-NOV-08 2V54 1 JRNL REVDAT 1 21-OCT-08 2V54 0 JRNL AUTH C.CAILLAT,D.TOPALIS,L.A.AGROFOGLIO,S.POCHET,J.BALZARINI, JRNL AUTH 2 D.DEVILLE-BONNE,P.MEYER JRNL TITL CRYSTAL STRUCTURE OF POXVIRUS THYMIDYLATE KINASE: AN JRNL TITL 2 UNEXPECTED DIMERIZATION HAS IMPLICATIONS FOR ANTIVIRAL JRNL TITL 3 THERAPY JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 16900 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 18971333 JRNL DOI 10.1073/PNAS.0804525105 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 20139 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1024 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 867 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 44 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3247 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 107 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.56900 REMARK 3 B22 (A**2) : 10.45100 REMARK 3 B33 (A**2) : -11.02100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.327 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 34.93 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : DTDP_CNS.PARAM REMARK 3 PARAMETER FILE 5 : POP_CNS.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : DTDP_CNS.TOPH REMARK 3 TOPOLOGY FILE 5 : POP_CNS.TOPH REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2V54 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1290037696. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79520 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1E2G REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23% PEG 400, 100 MM NA ACETATE, 100 MM REMARK 280 MES PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.38500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.58500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.79500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.58500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.38500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.79500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 31 CB CG OD1 ND2 REMARK 470 LYS A 133 CB CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 27 36.01 -98.47 REMARK 500 PRO A 29 107.67 -42.07 REMARK 500 ARG A 41 9.98 -67.79 REMARK 500 ARG A 55 -20.92 67.54 REMARK 500 LYS A 56 25.81 -69.86 REMARK 500 LYS A 57 142.59 169.39 REMARK 500 ARG A 93 143.59 74.94 REMARK 500 TYR A 94 -149.91 -150.97 REMARK 500 PRO B 29 98.75 -37.50 REMARK 500 ALA B 30 -21.30 -38.15 REMARK 500 ARG B 41 11.31 -68.43 REMARK 500 ARG B 93 140.67 72.75 REMARK 500 TYR B 94 -151.33 -152.24 REMARK 500 ASP B 165 -83.20 -59.68 REMARK 500 TRP B 203 53.91 35.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2004 DISTANCE = 6.08 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THYMIDINE-5'-DIPHOSPHATE (TYD): ALTERNATE CONFORMATION WITH REMARK 600 POP 160 REMARK 600 PYROPHOSPHATE (POP): ALTERNATE CONFORMATION WITH TYD 160 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1205 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 13 OD1 REMARK 620 2 GLU B 145 OE2 95.8 REMARK 620 3 POP B1206 O4 109.3 92.6 REMARK 620 4 TYD B1207 O2B 75.3 170.6 87.5 REMARK 620 5 HOH B2046 O 80.5 78.4 167.5 102.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TYD A 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE POP B 1206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TYD B 1207 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2W0S RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF VACCINIA VIRUS THYMIDYLATE KINASE BOUND TO REMARK 900 BRIVUDIN-5'- MONOPHOSPHATE DBREF 2V54 A 1 204 UNP P68693 KTHY_VACCC 1 204 DBREF 2V54 B 1 204 UNP P68693 KTHY_VACCC 1 204 SEQRES 1 A 204 MET SER ARG GLY ALA LEU ILE VAL PHE GLU GLY LEU ASP SEQRES 2 A 204 LYS SER GLY LYS THR THR GLN CYS MET ASN ILE MET GLU SEQRES 3 A 204 SER ILE PRO ALA ASN THR ILE LYS TYR LEU ASN PHE PRO SEQRES 4 A 204 GLN ARG SER THR VAL THR GLY LYS MET ILE ASP ASP TYR SEQRES 5 A 204 LEU THR ARG LYS LYS THR TYR ASN ASP HIS ILE VAL ASN SEQRES 6 A 204 LEU LEU PHE CYS ALA ASN ARG TRP GLU PHE ALA SER PHE SEQRES 7 A 204 ILE GLN GLU GLN LEU GLU GLN GLY ILE THR LEU ILE VAL SEQRES 8 A 204 ASP ARG TYR ALA PHE SER GLY VAL ALA TYR ALA ALA ALA SEQRES 9 A 204 LYS GLY ALA SER MET THR LEU SER LYS SER TYR GLU SER SEQRES 10 A 204 GLY LEU PRO LYS PRO ASP LEU VAL ILE PHE LEU GLU SER SEQRES 11 A 204 GLY SER LYS GLU ILE ASN ARG ASN VAL GLY GLU GLU ILE SEQRES 12 A 204 TYR GLU ASP VAL THR PHE GLN GLN LYS VAL LEU GLN GLU SEQRES 13 A 204 TYR LYS LYS MET ILE GLU GLU GLY ASP ILE HIS TRP GLN SEQRES 14 A 204 ILE ILE SER SER GLU PHE GLU GLU ASP VAL LYS LYS GLU SEQRES 15 A 204 LEU ILE LYS ASN ILE VAL ILE GLU ALA ILE HIS THR VAL SEQRES 16 A 204 THR GLY PRO VAL GLY GLN LEU TRP MET SEQRES 1 B 204 MET SER ARG GLY ALA LEU ILE VAL PHE GLU GLY LEU ASP SEQRES 2 B 204 LYS SER GLY LYS THR THR GLN CYS MET ASN ILE MET GLU SEQRES 3 B 204 SER ILE PRO ALA ASN THR ILE LYS TYR LEU ASN PHE PRO SEQRES 4 B 204 GLN ARG SER THR VAL THR GLY LYS MET ILE ASP ASP TYR SEQRES 5 B 204 LEU THR ARG LYS LYS THR TYR ASN ASP HIS ILE VAL ASN SEQRES 6 B 204 LEU LEU PHE CYS ALA ASN ARG TRP GLU PHE ALA SER PHE SEQRES 7 B 204 ILE GLN GLU GLN LEU GLU GLN GLY ILE THR LEU ILE VAL SEQRES 8 B 204 ASP ARG TYR ALA PHE SER GLY VAL ALA TYR ALA ALA ALA SEQRES 9 B 204 LYS GLY ALA SER MET THR LEU SER LYS SER TYR GLU SER SEQRES 10 B 204 GLY LEU PRO LYS PRO ASP LEU VAL ILE PHE LEU GLU SER SEQRES 11 B 204 GLY SER LYS GLU ILE ASN ARG ASN VAL GLY GLU GLU ILE SEQRES 12 B 204 TYR GLU ASP VAL THR PHE GLN GLN LYS VAL LEU GLN GLU SEQRES 13 B 204 TYR LYS LYS MET ILE GLU GLU GLY ASP ILE HIS TRP GLN SEQRES 14 B 204 ILE ILE SER SER GLU PHE GLU GLU ASP VAL LYS LYS GLU SEQRES 15 B 204 LEU ILE LYS ASN ILE VAL ILE GLU ALA ILE HIS THR VAL SEQRES 16 B 204 THR GLY PRO VAL GLY GLN LEU TRP MET HET TYD A1205 25 HET MG B1205 1 HET POP B1206 14 HET TYD B1207 46 HETNAM TYD THYMIDINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM POP PYROPHOSPHATE 2- FORMUL 3 TYD 2(C10 H16 N2 O11 P2) FORMUL 4 MG MG 2+ FORMUL 5 POP H2 O7 P2 2- FORMUL 7 HOH *107(H2 O) HELIX 1 1 GLY A 16 SER A 27 1 12 HELIX 2 2 PRO A 29 ASN A 31 5 3 HELIX 3 3 THR A 43 THR A 54 1 12 HELIX 4 4 ASN A 60 GLU A 74 1 15 HELIX 5 5 PHE A 75 GLN A 85 1 11 HELIX 6 6 TYR A 94 LYS A 105 1 12 HELIX 7 7 SER A 108 SER A 117 1 10 HELIX 8 8 GLY A 131 ASN A 136 1 6 HELIX 9 9 VAL A 147 GLU A 162 1 16 HELIX 10 10 GLU A 176 VAL A 195 1 20 HELIX 11 11 GLY B 16 SER B 27 1 12 HELIX 12 12 THR B 43 THR B 54 1 12 HELIX 13 13 ASN B 60 GLU B 74 1 15 HELIX 14 14 PHE B 75 GLN B 85 1 11 HELIX 15 15 TYR B 94 LYS B 105 1 12 HELIX 16 16 SER B 108 SER B 117 1 10 HELIX 17 17 GLY B 131 ARG B 137 1 7 HELIX 18 18 ASP B 146 GLU B 163 1 18 HELIX 19 19 GLU B 176 HIS B 193 1 18 SHEET 1 AA 5 ILE A 33 ASN A 37 0 SHEET 2 AA 5 THR A 88 ASP A 92 1 O THR A 88 N LYS A 34 SHEET 3 AA 5 LEU A 6 GLU A 10 1 O ILE A 7 N VAL A 91 SHEET 4 AA 5 LEU A 124 LEU A 128 1 O LEU A 124 N VAL A 8 SHEET 5 AA 5 TRP A 168 ILE A 171 1 O GLN A 169 N PHE A 127 SHEET 1 BA 5 ILE B 33 ASN B 37 0 SHEET 2 BA 5 THR B 88 ASP B 92 1 O THR B 88 N LYS B 34 SHEET 3 BA 5 LEU B 6 GLY B 11 1 O ILE B 7 N VAL B 91 SHEET 4 BA 5 LEU B 124 LEU B 128 1 O LEU B 124 N VAL B 8 SHEET 5 BA 5 TRP B 168 ILE B 171 1 O GLN B 169 N PHE B 127 LINK OD1 ASP B 13 MG MG B1205 1555 1555 2.28 LINK OE2 GLU B 145 MG MG B1205 1555 1555 2.54 LINK MG MG B1205 O4 BPOP B1206 1555 1555 2.26 LINK MG MG B1205 O2BATYD B1207 1555 1555 2.04 LINK MG MG B1205 O HOH B2046 1555 1555 1.84 CISPEP 1 PHE A 38 PRO A 39 0 0.09 CISPEP 2 PHE B 38 PRO B 39 0 -0.15 SITE 1 AC1 5 ASP B 13 GLU B 145 POP B1206 TYD B1207 SITE 2 AC1 5 HOH B2046 SITE 1 AC2 18 ASP A 13 LYS A 17 THR A 18 ASN A 37 SITE 2 AC2 18 PHE A 38 PRO A 39 ARG A 41 LEU A 53 SITE 3 AC2 18 PHE A 68 ARG A 72 ASP A 92 ARG A 93 SITE 4 AC2 18 GLY A 98 TYR A 101 TYR A 144 HOH A2009 SITE 5 AC2 18 HOH A2024 HOH A2046 SITE 1 AC3 9 LYS B 14 SER B 15 GLY B 16 LYS B 17 SITE 2 AC3 9 THR B 18 GLU B 145 MG B1205 TYD B1207 SITE 3 AC3 9 HOH B2005 SITE 1 AC4 18 ASP B 13 LYS B 17 PHE B 38 PRO B 39 SITE 2 AC4 18 ARG B 41 LEU B 53 PHE B 68 ARG B 72 SITE 3 AC4 18 ARG B 93 SER B 97 GLY B 98 TYR B 101 SITE 4 AC4 18 TYR B 144 MG B1205 POP B1206 HOH B2009 SITE 5 AC4 18 HOH B2028 HOH B2046 CRYST1 56.770 55.590 161.170 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017615 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017989 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006205 0.00000